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Mappings

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Aquilegia coerulea
  Phytozome v9.0
          Acoerulea_195 download (m02, text, excel )  (1.0)
Arabidopsis lyrata
  Phytozome v9.0
          Alyrata_107 download (m02, text, excel )  (1.0)
Arabidopsis thaliana
  Affymetrix
          Ath_AFFY_ATH1_TAIR8_Jan2010 download (m02, text, excel )  (1.1)
          Ath_AFFY_ATH1_TAIR9_Jan2010 download (m02, text, excel )  (1.1)
          Mapping_overview_Affymetrix_2005 download (m02, text, excel )  (5.0c1)
          ath_affy_8k_experimental download (m02, text, excel )  (0.6)
          ath_affy_tair6 download (m02, text, excel )  (Sep06)
          Ath_AFFY_TAIR7 download (m02, text, excel )  (Aug08)
          Ath_AFFY_ATH1_TAIR8_041208 download (m02, text, excel )  (1.0)
          Ath_AFFY_ATH1_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
          Ath_AFFY_STv1.1_TRANSCRIPT_CLUSTER_TAIR10_LOCUS download (m02, text, excel )  (1.0)
  AGILENT
          Ath_AGILENT_TAIR8_0609 download (m02, text, excel )  (1.0)
  TAIR 6
          Ath_AGI_TAIR6 download (m02, text, excel )  (SEP06)
  TAIR 7
          Ath_AGI_TAIR7 download (m02, text, excel )  (June07)
          Ath_AGI_TAIR7 download (m02, text, excel )  (July07)
  TAIR 8
          Ath_AGI_TAIR8 download (m02, text, excel )  (Dec08)
  TAIR10
          Ath_AGI_LOCUS_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
          Ath_AGI_ISOFORM_MODEL_TAIR10_Aug2012 download (m02, text, excel )  (1.0)
  TAIR9
          Seed_custom_arabidopsis download (m02, text, excel )  (1)
          Ath_AGI_TAIR9_Jan2010 download (m02, text, excel )  (1.0)
          Ath_AGI_MODELS_TAIR9_Jan09 download (m02, text, excel )  (1.0)
  no id type
          MappingMetabolites download (m02, text, excel )  (1.0)
          Mapping_overview_AgiCode download (m02, text, excel )  (5.0b2)
          ath_catma_experimental download (m02, text, excel )  (0.6)
Brachypodium distachyon
  Phytozome v9.0
          Bdistachyon_192 download (m02, text, excel )  (1.0)
Brassica napus
  Affymetrix
          BrasEX1s_unigene download (m02, text, excel )  (1.0)
Brassica rapa
  Phytozome v9.0
          Brapa_197 download (m02, text, excel )  (1.0)
Capsella rubella
  Phytozome v9.0
          Crubella_183 download (m02, text, excel )  (1.0)
Carica papaya
  Phytozome v9.0
          Cpapaya_113 download (m02, text, excel )  (1.0)
Chlamydomonas reinhardtii
  Phytozome v9.0
          Creinhardtii_236 download (m02, text, excel )  (1.0)
  no id type
          Chlamydomonas rheinhardtii download (m02, text, excel )  (Nov07)
Citrus clementina
  Phytozome v9.0
          Cclementina_182 download (m02, text, excel )  (1.0)
Citrus sinensis
  Phytozome v9.0
          Csinensis_154 download (m02, text, excel )  (1.0)
Citrus spp.
  Affymetrix
          Citrus_AFFY_Jul10 download (m02, text, excel )  (1.0)
Coccomyxa subellipsoidea C-169
  Phytozome v9.0
          CsubellipsoideaC169_227 download (m02, text, excel )  (1.0)
Cucumis sativus
  Phytozome v9.0
          Csativus_122 download (m02, text, excel )  (1.0)
  no id type
          Chloroplast PlasTi-microarray mapping download (m02, text, excel )  (1.0)
Eucalyptus grandis
  Phytozome v9.0
          Egrandis_201 download (m02, text, excel )  (1.0)
Fragaria vesca
  Phytozome v9.0
          Fvesca_226 download (m02, text, excel )  (1.0)
Glycine max
  Affymetrix
          Gmax_AFFY_09 download (m02, text, excel )  (1.0)
  genome_release
          Gmax_109_peptide download (m02, text, excel )  (1.1)
  Phytozome v9.0
          Gmax_189 download (m02, text, excel )  (1.0)
Gossypium hirsutum
  Affymetrix
          Cotton_AFFY_Jan12 download (m02, text, excel )  (1.0)
  no id type
          Ghir_MAPPING_Feb10 download (m02, text, excel )  (1.0)
Gossypium raimondii
  Phytozome v9.0
          Graimondii_221 download (m02, text, excel )  (1.0)
Hordeum vulgare
  Affymetrix
          Hvu_Affy download (m02, text, excel )  (1.1)
  AGILENT
          Hvul_AGILENT_DESIGNID_021623 download (m02, text, excel )  (1.0)
Linum usitatissimum
  Phytozome v9.0
          Lusitatissimum_200 download (m02, text, excel )  (1.0)
Malus domestica
  Phytozome v9.0
          Mdomestica_196 download (m02, text, excel )  (1.0)
Manihot esculenta
  Phytozome v9.0
          Mesculenta_147 download (m02, text, excel )  (1.0)
Medicago truncatula
  Affymetrix
          Mt_AFFY_Mt3.0_0510 download (m02, text, excel )  (1.0)
          Medicago_AFFY_09 download (m02, text, excel )  (1.0)
  genome_release
          Mt_Mt3.0_0510 download (m02, text, excel )  (1.0)
          Mt_Mt3.5_v3_0411 download (m02, text, excel )  (1.0)
  Phytozome v9.0
          Mtruncatula_198 download (m02, text, excel )  (1.0)
  no id type
          Medicago16k download (m02, text, excel )  (1.0)
Micromonas pusilla CCMP1545
  Phytozome v9.0
          MpusillaCCMP1545_228 download (m02, text, excel )  (1.0)
Mimulus guttatus
  Phytozome v9.0
          Mguttatus_140 download (m02, text, excel )  (1.0)
Nicotiana tabacum
  AGILENT
          Ntob_AGILENT44K_mapping download (m02, text, excel )  (1.0)
Oryza sativa Japonica Group
  Affymetrix
          Osa_AFFY_150909 download (m02, text, excel )  (1.0)
  MSU_v7
          Osa_MSU_v7 download (m02, text, excel )  (1.0)
  OSGI
          OSGI.release_19.mapping download (m02, text, excel )  (1.0)
  Phytozome v9.0
          Osativa_204 download (m02, text, excel )  (1.0)
  RAPDB-IRGSP1.0
          Osa_RAPDB_mapping download (m02, text, excel )  (1.0)
  no id type
          Rice_japonica_automatic_mapping08 download (m02, text, excel )  (08)
          Rice_japonica_mapping_merged_08 download (m02, text, excel )  (1.0)
          Rice_japonica_manual_mapping08 download (m02, text, excel )  (08)
Ostreococcus lucimarinus
  Phytozome v9.0
          Olucimarinus_231 download (m02, text, excel )  (1.0)
Panicum virgatum
  Affymetrix
          Pvi_cDNAa520831.mapping download (m02, text, excel )  (1.0)
Physcomitrella patens
  Phytozome v9.0
          Ppatens_152 download (m02, text, excel )  (1.0)
Populus trichocarpa
  Affymetrix
          Ptrich_AFFY_09 download (m02, text, excel )  (1.0)
  JGIv1.1
          Ptr_JGI1_1_0309 download (m02, text, excel )  (1.0)
  Phytozome v9.0
          Ptrichocarpa_v3.0_210_peptide download (m02, text, excel )  (1.0)
Prunus persica
  Phytozome v9.0
          Ppersica_139 download (m02, text, excel )  (1.0)
Ricinus communis
  Phytozome v9.0
          Rcommunis_119 download (m02, text, excel )  (1.0)
Saccharum officinarum
  Affymetrix
          Soff_AFFY_09 download (m02, text, excel )  (1.0)
Selaginella moellendorffii
  Phytozome v9.0
          Smoellendorffii_91 download (m02, text, excel )  (1.0)
Setaria italica
  Phytozome v9.0
          Sitalica_164 download (m02, text, excel )  (1.0)
Solanum lycopersicum
  Affymetrix
          Slyc_AFFY_SGN_BUILD2_070709 download (m02, text, excel )  (1.1)
  AGILENT
          Slyc_AGILENT44k_SGN_BUILD2 download (m02, text, excel )  (1.0)
  ITAG2.3
          Slyc_ITAG2.3 download (m02, text, excel )  (1.1)
  SGN
          SGN_UnigeneR2_commodity download (m02, text, excel )  (1.0)
          Ses_SGNR200607 download (m02, text, excel )  (31-05-2007)
          Slyc_SGN_BUILD2_070709 download (m02, text, excel )  (1.1)
  no id type
          Ses_EUTOM1 download (m02, text, excel )  (Nov08)
          Ses_TOM1 download (m02, text, excel )  (Sep06)
          Ses_Unigene download (m02, text, excel )  (Sep06)
          Ses_TOM2 download (m02, text, excel )  (May07)
Solanum tuberosum
  genome_release
          Stub_PGSC_DM_v3.4 download (m02, text, excel )  (1.0)
  Phytozome v9.0
          Stuberosum_206 download (m02, text, excel )  (1.0)
  SGN
          Stub_SGN_UNIGENES_0609 download (m02, text, excel )  (1.0)
  no id type
          Stu_TIGR download (m02, text, excel )  (August07)
          Potato_POCI download (m02, text, excel )  (Sep08)
Sorghum bicolor
  Phytozome v9.0
          Sbicolor_79 download (m02, text, excel )  (1.0)
Thellungiella halophila
  Phytozome v9.0
          Thalophila_173 download (m02, text, excel )  (1.0)
Thellungiella salsuginea
  AGILENT
          Thels_AGILENT44k download (m02, text, excel )  (1.0)
Theobroma cacao
  Phytozome v9.0
          Tcacao_233 download (m02, text, excel )  (1.0)
Triticum aestivum
  Affymetrix
          Taes_AFFY_0709 download (m02, text, excel )  (1.0)
  DFCI wheat gene index
          Taes_TAGI_release_12 download (m02, text, excel )  (1.0)
Vitis vinifera
  Affymetrix
          Vvin_AFFY_09 download (m02, text, excel )  (0.2)
  OPERON
          Vvi_VVGIv5_OPERON_09 download (m02, text, excel )  (1.0)
  Phytozome v9.0
          Vvinifera_145 download (m02, text, excel )  (1.0)
  VvGI version 5
          Vvi_VVGIv5_09 download (m02, text, excel )  (1.0)
Volvox carteri
  Phytozome v9.0
          Vcarteri_199 download (m02, text, excel )  (1.0)
Zea mays
  Affymetrix
          Zma_AFFY_chromosomal_locations download (m02, text, excel )  (1.1)
  AGILENT
          ZM_AGILENT_TARGETS_0509 download (m02, text, excel )  (1.0)
          Zm_AGILENT_PROBES_0509 download (m02, text, excel )  (1.0)
  genome_release
          Zm_GENOME_RELEASE_09 download (m02, text, excel )  (1.0)
          Zm_B73_5b_FGS_cds_2012 download (m02, text, excel )  (1.1)
  Phytozome v9.0
          Zmays_181 download (m02, text, excel )  (1.0)
  no id type
          ZMGI.060509 download (m02, text, excel )  (1.0)
undefined species
  no id type
          BIN2EC download (m02, text, excel )  (1.0)
          R_mapping download (m02, text, excel )  (1.0)
          ChlorPlast_customarray download (m02, text, excel )  (1)
          BIN2GO download (m02, text, excel )  (1.0)

Download pathways and mappings for MapMan

  • Mappings

    Download the mapping file to a directory on your computer. Within the MapMan application use the right click popup menu on the mapping folder and add the new mapping from file.

  • Pathways

    For each Pathway, download the image file as well as the xml file into the same directory. Within the MapMan application use the right click popup menu on the pathway folder and add the new pathway from (image) file. The corresponding xml file will be read automatically if within the same directory

  • Sample Data Files

Sample data files to test MapMan