Mercator pipeline for automated sequence annotation
Using the Mercator web application you can assign MapMan "Bins" to arbitrary DNA or protein input sequences. The output will be a text file mapping each input identifier to one or more Bins. This file can directly be used as a mapping file for the high-throughput data visualization and meta-analysis software MapMan.
This is the most recent version of Mercator and assigns genes to the most recent MapMan ontology.
If you use Mercator4 V2.0 for your work, please cite:
Schwacke R, Ponce-Soto GY, Krause K, Bolger AM, Arsova B, Hallab A, Gruden K, Stitt M, Bolger ME, Usadel B
Mol Plant. 2019 Jun 3;12(6): 879-892
This is an older version of Mercator which can still be used, but does not reflect recent biological publications.
If you use Mercator 3.6 for your work, please cite:
Lohse M, Nagel A, Herter T, May P, Schroda M, Zrenner R, Tohge T, Fernie AR, Stitt M, Usadel B.
Plant Cell Environ. 2013 Nov 15. doi: 10.1111/pce.12231. [Epub ahead of print]