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Using ManMan for Medicago RNA-seq data

Could anybody help me to find MapMan IDs for all Medicago genes.

We have Medicago RNA-seq data and expression levels for all Medicago genes with gene IDs e.g. Medtr8g015910 . But we could not map/visualize this into MapMan file until we have MapMan ID OR pacid e.g. ac235757_50.1|pacid:23040950 or IMGA|AC235757_50.1. How could we get the MapMan IDs or pacid for all Medicago genes with Medicago gene IDs.

Any help will be greatly appreciated.

RE: Using ManMan for Medicago RNA-seq data
答え
16/09/28 19:01 Pooja P Pantへのコメント
Hi Pooja

simplest is to use Mercator. As this look like standard Ids, if you can point me where to get the FAST files, I will also run it through Mercator and put it online.

Best Wishes
Björn