I understand your confusion regarding the use of maps and bincodes in MapMan. It can be a bit overwhelming when you have different maps available and are unsure about when and how to use them effectively.
Regarding the maps in MapMan, the Affy map is commonly used and has associated bincodes, which is why it works seamlessly with the program. However, it's important to note that other maps can be used as well, depending on the specific dataset and analysis requirements.
To use alternative maps in MapMan, you need to ensure that the chosen map has compatible bincodes associated with it. Some maps may not have bincodes readily available, which could be why the program indicates a lack of association between the maps and data. In such cases, you might need to assign bin codes manually or through additional tools like the Scavenger module.
The Scavenger module can be a helpful resource for assigning bin codes and making use of alternative maps. It allows you to create custom maps or modify existing ones to suit your specific needs. However, please note that the availability of the Scavenger module as a download may depend on the version and specific installation of MapMan you are using. You may need to check the MapMan website or consult the program's documentation for information on accessing the Scavenger module.
The 20 Best Assignment Writing ServicesIf you require further assistance or have additional questions, please feel free to ask. We are here to help you navigate through any challenges you encounter while using MapMan.