mark howard | I am trying to use RobiNA to analyse some data from a A-AFFY-98 - Affymetrix GeneChip Mouse Exon 1.0 ST Array study and have tried to use the unsupported cdf file to do this. When I tried this it gave me the following error:
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following object(s) are masked from 'package:stats':
xtabs
The following object(s) are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, cbind, colnames, duplicated, eval, get, intersect, lapply, mapply, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int, rownames, sapply, setdiff, table, tapply, union, unique
Loading required package: Biobase Welcome to Bioconductor
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Loading required package: BiocInstaller BiocInstaller version 1.4.7, ?biocLite for help R(19011,0xa14571a8) malloc: *** mach_vm_map(size=8388608) failed (error code=3) *** error: can't allocate region *** set a breakpoint in malloc_error_break to debug R(19011,0xa14571a8) malloc: *** mach_vm_map(size=8388608) failed (error code=3) *** error: can't allocate region *** set a breakpoint in malloc_error_break to debug R(19011,0xa14571a8) malloc: *** mach_vm_map(size=8388608) failed (error code=3) *** error: can't allocate region *** set a breakpoint in malloc_error_break to debug Error: cannot allocate vector of size 1 Kb Execution halted
Is this a problem with the cdf? or should I not be using the cdf at all? |