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Poplar Data Format

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Eric Lloyd Patterson Rank: Youngling Posts: 1 Join Date: 1/8/13 Recent Posts	Poplar Data Format Answer 1/9/13 11:06 PM Hello, I am working in Poplar on an RNA-SEQ experiment. I have my expression data (in RFLK) for each gene, and my two treatments (Plus and minus a mineral). I have calculated the log difference between those treatments. Should I be working with the raw RFLK data or can I just work the Log difference (aka the fold change between treatments)? -Thanks!
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Björn Usadel Rank: Jedi Knight Posts: 200 Join Date: 7/1/09 Recent Posts	RE: Poplar Data Format Answer 1/10/13 11:53 AM as a reply to Eric Lloyd Patterson. Dear Eric just use log(2) fold changes. You did the right thing. Cheers, björn
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