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Using MapMan

Modifying mapping files

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Pankaj Barah

Rank: Youngling

Posts: 1

Join Date: 3/1/11

Recent Posts

Modifying mapping files

5/26/11 5:12 PM

Hi,

I have been using MapMan for last couple of months. So far so good. Exciting experience.
I have been using Ath_AGI_TAIR9_Jan2010.m02 mapping files. When I look in to this mapping annotation (by downloading the .txt file from MapMan store) find that some genes are not included in this mapping. I have gone though the tutorial section 'how to preparing custom annotations'. I am wondering instead of generating an entirely new custom mapping, if we can modify the exiting Ath_AGI_TAIR9_Jan2010.m02 file by including new annotations. How to open and edit .m02 files. If we can do so , it will be great .

Again, will TAIR10 mappings be available soon ?

Regards,

Pankaj Barah

Marc Lohse Rank: Jedi Master Posts: 271 Join Date: 6/30/09 Recent Posts	RE: Modifying mapping files Answer 9/6/11 11:49 AM as a reply to Pankaj Barah. Dear Pankaj Barah, to modify a mapping file, please obtain the text or MS Excel version of it from the MapManStore (http://mapman.gabipd.org/web/guest/mapmanstore). The files are in a simple table that can easily be modified. Please see the MapMan manual section 3.1 for further details. best greetings, Marc
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