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Using MapMan

What is the easiest/best way to map similar genes?


I am a Biology student at IUPUI working on a senior thesis that compares Fragaria (strawberry) genes to that of Arabidopsis.  We can find the genes that are similar through BLAST and other tools but we are trying to map the activity data from Fragaria onto the arabidopsis maps and pathways.  The thing is, there is a list of gene ID numbers in the experimental data files that in some way correspond to the gene ID numbers you can get from BLAST.  Does anyone know how these two numbers correspond?  Is there a list of both sets of numbers showing what annotation MapMan uses and what annotation the BLAST programs use?  

Thank you for any help you can give!