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Using MapMan

metabolite mapping

metabolite mapping
Answer
6/17/15 7:24 PM
Hi,
I have list of metabolites with their abundance(fold chang). I need to map thesemetabolites using mapman with their fold change. list includes amino acids, sugars, fatty acids and secondary metabolites. So how can I prepare data format for this. I would greatly appreciatecan anyone can send sample file to me(excel).

thank you

RE: metabolite mapping
Answer
6/19/15 10:26 AM as a reply to Pushpa D doddaraju.
Dear Pushpa

more or less like transcriptomoics experiments. Only the identifiers need to match.
In the simplest case look into the sample file nitrogenStarvation coming with MapMan. The top of the file contains metabolites in one contrast. If you added further columns you can add more experiments.

Best
Björn