Data Sets to Show

Hordeum vulgare

• Grain maturation and germination

  N. Sreenivasulu et al. (2008) Barley Grain Maturation and Germination: Metabolic Pathway and Regulatory Network Commonalities and Differences Highlighted by New MapMan/PageMan Profiling Tools. Plant Physiol. 146:1738-1758. (PubMed)

Medicago trunculata

• Defense-associated gene expression

  Tellström, V., B. Usadel, O. Thimm, M. Stitt, H. Küster and K. Niehaus (2007) The lipopolysaccharide of Sinorhizobium meliloti suppresses defense-associated gene expression in cell cultures of the host plant Medicago truncatula. Plant Physiol. 143(2): 825-37. (PubMed)

Arabidopsis thaliana

• Diurnal Cycle:

  Arabidopsis thaliana rosettes were harvested at six different time points during 12-h-light/12-h-dark treatments to investigate changes in gene expression and metabolite change of the starchless phosphoglucomutase (pgm) mutant compared to Col-0 wildtype. Bläsing et al. Plant Cell. 2005 17(12):3257-81

• Extended night:

  Investigation of the response of Arabidopsis rosettes to low sugar: one investigates the response of extension of the night, and the other compares wildtype Col-0 and the starchless pgm mutant at the end of the night.

• N-starvation and nitrate re-addition:

  Investigation of the response of Arabidopsis seedlings to N-starvation and nitrate re-addition.
  Scheible et al. (2004) Plant Physiology 136(1): 2483-2499.

• UV-B stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to UVB stress.
  For more information and data download go to TAIR website.

• Cold stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to cold stress.
  For more information and data download go to TAIR website.

• Drought stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to drought stress.
  For more information and data download go to TAIR website.

• Genotoxic stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to genotoxic stress.
  For more information and data download go to TAIR website.

• Heat stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to heat stress.
  For more information and data download go to TAIR website.

• Osmotic stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to osmotic stress.
  For more information and data download go to TAIR website.

• Oxidative stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to oxidative stress.
  For more information and data download go to TAIR website.For more information and data download go to TAIR website.

• Wound stress:

  Investigation of the response of Arabidopsis seedlings (roots and green parts) to wound stress.
  For more information and data download go to TAIR website.

• CO2_treatment:

  Identification of genes controlling stomatal number in response to rising atmospheric carbon dioxide levels.
  For more information go to NASC website.

• Ethylene:

  Ethylene induced hyponastic growth.
  For more information go to NASC website.

• Mutant cov

  Role of COV in vascular patterning.
  For more information go to NASC website.

• Analysis of the NO3-response pathway

  Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots
  For more information go to NASC website.

• Gene-knock-out acn1-2

  Investigating the links between organic acid and carbohydrate regulation of gene expression
  For more information go to NASC website.

• Control of lignification

  Investigation of lignification
  For more information go to NASC website.

• Plant Programmed Cell Death

  Genes Involved in Plant Programmed Cell Death (PCD)
  For more information go to NASC website.

• Transcriptome analysis of glyoxylate cycle knock-out mutants in early stages of seedling development

  Genes Involved in Plant Programmed Cell Death (PCD)
  For more information go to NASC website.

• Trichome: Common trichome transcripts from 4 different single-cell studies (Lickfeld et al 2008 verlinkt mit PMID:18006186, Jakoby et al 2008 PMID:18805951, Marks et al 2008 PMID:18643981, Kryvych et al 2008 PMID:18160300) were mapped together with metabolites identified by Ebert et al 2010 PMID:20150518. More detailed information are provided in a related review (Kryvych et al, Phytochemistry, accepted). Trichome-specific transcripts are depicted as blue filled squares and --specific metabolites as red filled circles.
• Metabs with Stats: View FXA based data set.