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KEGG pathway analysis

KEGG pathway analysis
Answer
12/18/14 6:37 AM
I am trying to do the KEGG pathway analysis for my RNA-seq data. My purpose is to display the up- and down- regulated genes in the involved pathways between my mutant and wild type. But I am not quite sure if I could use MapMan to do it. Specifically, I am not sure how could I integrate a KEGG pathway file into the program. And I could not find the mapping file for my particular species. All my work is based on the bacteria Burkholderia Glumae. Could you please give some instructions regarding this? I really appreciate for your any kind help!!