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new mapping file

new mapping file
new mapping
Respuesta
19/09/14 5:44
Dear MapMan,
I'm so intersting in mapman recently, and now I have some sequences in FASTA, I want to make Mapping file for it.
Cound you tell me how to make the mapping file?
Thank you so much!
sincerely,from china
xinhui.liao

Thanks everyone, I think I have got the solution, that is "mercator" [http://mapman.gabipd.org/web/guest/mercator].

RE: new mapping file
Respuesta
19/09/14 10:11 en respuesta a liao xinhui liao.
Dear Xinhui Liao

I reckon the simplest would be for you to use Mercator where you submit FASTA formatted sequences (these should be contoigs though).
We have experienced some trouble with the hardware though in the last few months. If you run into problems you might then consider waiting a bit as we are moving the Mercator pipeline to a more stable and powerful environment.

Best Wishes
Björn

RE: new mapping file
Respuesta
24/09/14 6:18 en respuesta a Björn Usadel.
Thank you very much!
I have tryed Mercator, and she work very well, thanks~
But I have trouble with the sequences limit that published on Mercator web page ,.
So I try to contact <lohse@mpimp-golm.mpg.de>, and I don't get an reply up to now, could please help me?
Thank you very much!

Xinhui Liao

RE: new mapping file
Respuesta
25/09/14 8:52 en respuesta a liao xinhui liao.
Ah I see

maybe contact Marie Bolger mbolger AT bio1.rwth-aachen.de instead.

Thanks
Björn

RE: new mapping file
Respuesta
25/09/14 9:42 en respuesta a Björn Usadel.
Many thanks!
I have send an email to Marie Bolger just now, hope to solve my problem~
Thanks a lot~

XinHui