BINCODE NAME IDENTIFIER DESCRIPTION TYPE '1' 'PS' 'tr|b7g7j9|b7g7j9_phatc' "'(at5g38660 : 95.9) mutant has Altered acclimation responses;; ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2854 (InterPro:IPR021275), Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT5G38650.1). & (loc_os08g27010.1 : 95.9) no description available & (chl4|516348 : 83.6) no description available & (ipr021275 : 62.169796) Protein of unknown function DUF2854 & (reliability: 191.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48524 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fyl0|b7fyl0_phatc' "'(chl4|525343 : 172.0) no description available & (q03965|l181_chleu : 147.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 138.0) no description available & (ipr022796 : 84.790184) Chlorophyll A-B binding protein & (loc_os09g26810.1 : 76.6) no description available & (at2g34420 : 75.9) Photosystem II type I chlorophyll a/b-binding protein; photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (reliability: 151.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx1 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fvf9|b7fvf9_phatc' "'(chl4|525343 : 181.0) no description available & (q03965|l181_chleu : 153.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 137.0) no description available & (ipr022796 : 85.83053) Chlorophyll A-B binding protein & (at2g34420 : 73.9) Photosystem II type I chlorophyll a/b-binding protein; photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (loc_os09g26810.1 : 72.0) no description available & (reliability: 147.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx3 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7frw5|b7frw5_phatc' "'(gnl|cdd|84819 : 144.0) no description available & (ipr022796 : 66.24434) Chlorophyll A-B binding protein & (at2g40100 : 43.9) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.3); CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2). & (q03965|l181_chleu : 43.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os07g37240.1 : 43.1) no description available & (chl4|525343 : 41.2) no description available & (reliability: 87.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf1 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g5b6|b7g5b6_phatc' "'(gnl|cdd|84819 : 119.0) no description available & (ipr022796 : 56.87148) Chlorophyll A-B binding protein & (chl4|525378 : 43.1) no description available & (q03965|l181_chleu : 42.7) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os04g38410.1 : 40.0) no description available & (at1g15820 : 38.5) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (reliability: 77.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf10 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7gbk6|b7gbk6_phatc' "'(gnl|cdd|84819 : 148.0) no description available & (ipr022796 : 72.584114) Chlorophyll A-B binding protein & (chl4|525378 : 48.1) no description available & (at5g01530 : 45.4) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g37240.1 : 45.1) no description available & (q03965|l181_chleu : 44.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 90.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf11 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g871|b7g871_phatc' "'(gnl|cdd|84819 : 110.0) no description available & (ipr022796 : 53.780437) Chlorophyll A-B binding protein & (chl4|525378 : 49.7) no description available & (loc_os06g21590.1 : 48.9) no description available & (q03965|l181_chleu : 48.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at3g54890 : 43.9) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 87.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf13 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b5y5l4|b5y5l4_phatc' "'(gnl|cdd|84819 : 97.6) no description available & (chl4|525378 : 55.5) no description available & (q03965|l181_chleu : 54.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (ipr022796 : 51.929836) Chlorophyll A-B binding protein & (at3g54890 : 49.3) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (loc_os06g21590.1 : 44.7) no description available & (reliability: 91.6) & (original description: Fucoxanthin chlorophyll a/c protein, lhcf type OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf14 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7gc99|b7gc99_phatc' "'(gnl|cdd|84819 : 109.0) no description available & (ipr022796 : 57.56463) Chlorophyll A-B binding protein & (chl4|525378 : 55.1) no description available & (q03965|l181_chleu : 51.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os02g52650.1 : 43.9) no description available & (at3g54890 : 39.7) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 77.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf17 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7frw4|b7frw4_phatc' "'(gnl|cdd|84819 : 137.0) no description available & (ipr022796 : 69.969154) Chlorophyll A-B binding protein & (at2g40100 : 43.1) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.3); CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2). & (loc_os07g37240.1 : 42.7) no description available & (chl4|523315 : 41.2) no description available & (q93wd2|cb29_chlre : 40.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (reliability: 86.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf2 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7frw2|b7frw2_phatc' "'(gnl|cdd|84819 : 139.0) no description available & (ipr022796 : 64.13591) Chlorophyll A-B binding protein & (chl4|525378 : 56.2) no description available & (q03965|l181_chleu : 50.4) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os07g37240.1 : 47.4) no description available & (at5g01530 : 47.0) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 94.0) & (original description: Protein fucoxanthin chlorophyl a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf4 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7gbk7|b7gbk7_phatc' "'(gnl|cdd|84819 : 144.0) no description available & (ipr022796 : 68.28909) Chlorophyll A-B binding protein & (chl4|525378 : 48.9) no description available & (at5g01530 : 45.4) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g37240.1 : 45.4) no description available & (q03965|l181_chleu : 44.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 90.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf5 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g5s7|b7g5s7_phatc' "'(gnl|cdd|84819 : 117.0) no description available & (ipr022796 : 57.879337) Chlorophyll A-B binding protein & (chl4|525378 : 49.3) no description available & (q03965|l181_chleu : 48.5) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at3g61470 : 43.1) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os07g37240.1 : 42.7) no description available & (reliability: 80.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf6 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g6y1|b7g6y1_phatc' "'(gnl|cdd|84819 : 135.0) no description available & (ipr022796 : 67.618935) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 44.3) no description available & (at3g54890 : 42.7) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (p20866|cb2_phypa : 41.2) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss) & (chl4|513866 : 40.8) no description available & (reliability: 84.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf8 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g955|b7g955_phatc' "'(gnl|cdd|84819 : 131.0) no description available & (ipr022796 : 62.92482) Chlorophyll A-B binding protein & (q03965|l181_chleu : 48.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at2g40100 : 45.4) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.3); CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2). & (chl4|525378 : 45.4) no description available & (loc_os07g37240.1 : 45.1) no description available & (reliability: 90.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf9 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g502|b7g502_phatc' "'(gnl|cdd|84819 : 109.0) no description available & (ipr022796 : 79.94862) Chlorophyll A-B binding protein & (chl4|525378 : 72.8) no description available & (loc_os06g21590.1 : 71.2) no description available & (at3g54890 : 70.5) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (q03965|l181_chleu : 64.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 128.6) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr13 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g503|b7g503_phatc' "'(gnl|cdd|84819 : 80.3) no description available & (chl4|513033 : 61.2) no description available & (ipr022796 : 53.15791) Chlorophyll A-B binding protein & (loc_os02g52650.1 : 52.0) no description available & (at3g47470 : 48.5) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (q03965|l181_chleu : 45.4) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 87.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr14 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fqe1|b7fqe1_phatc' "'(gnl|cdd|84819 : 95.3) no description available & (chl4|525378 : 68.2) no description available & (ipr022796 : 67.01069) Chlorophyll A-B binding protein & (loc_os02g52650.1 : 55.5) no description available & (q03965|l181_chleu : 54.7) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at1g45474 : 53.5) Encodes a component of the light harvesting complex of photosystem I.; photosystem I light harvesting complex gene 5 (LHCA5); FUNCTIONS IN: pigment binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, photosystem I antenna complex, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light-harvesting chlorophyll-protein complex I subunit A4 (TAIR:AT3G47470.1); Has 2339 Blast hits to 2263 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2004; Viruses - 0; Other Eukaryotes - 331 (source: NCBI BLink). & (reliability: 105.6) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr4 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fqs0|b7fqs0_phatc' "'(gnl|cdd|84819 : 118.0) no description available & (chl4|513033 : 84.3) no description available & (p27494|cb23_tobac : 77.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g54890 : 76.6) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (ipr022796 : 76.38579) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 70.5) no description available & (reliability: 138.6) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr8 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fr60|b7fr60_phatc' "'(chl4|525378 : 166.0) no description available & (q03965|l181_chleu : 136.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 124.0) no description available & (ipr022796 : 79.28214) Chlorophyll A-B binding protein & (loc_os03g39610.2 : 67.0) no description available & (at1g29920 : 64.7) Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.; chlorophyll A/B-binding protein 2 (CAB2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast; EXPRESSED IN: 13 plant structures; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2420 Blast hits to 2340 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 129.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx2 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7fpl6|b7fpl6_phatc' "'(gnl|cdd|84819 : 91.5) no description available & (chl4|525343 : 62.4) no description available & (ipr022796 : 61.76433) Chlorophyll A-B binding protein & (q03965|l181_chleu : 56.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os09g26810.1 : 43.5) no description available & (at1g15820 : 42.4) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (reliability: 84.8) & (original description: Fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17531 PE=4 SV=1)'" P '1.1.1.1' 'PS.lightreaction.photosystem II.LHC-II' 'tr|b7g6s9|b7g6s9_phatc' "'(gnl|cdd|84819 : 115.0) no description available & (loc_os07g37240.1 : 79.3) no description available & (at3g08940 : 78.6) Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1); Has 2312 Blast hits to 2241 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1976; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (ipr022796 : 76.80629) Chlorophyll A-B binding protein & (chl4|510281 : 74.7) no description available & (p36494|cb4_spiol : 63.5) Chlorophyll a-b binding protein CP24, chloroplast precursor - Spinacia oleracea (Spinach) & (reliability: 157.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_6062 PE=4 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'tr|b7fpg7|b7fpg7_phatc' "'(chl4|522634 : 71.6) no description available & (loc_os03g21560.1 : 62.8) no description available & (at1g03600 : 58.5) PSB27; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 273 Blast hits to 273 proteins in 82 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (reliability: 117.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42765 PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'sp|a0t0g9|psba_phatc' "'(gnl|cdd|79222 : 677.0) no description available & (p06402|psba_marpo : 612.0) Photosystem Q(B) protein (32 kDa thylakoid membrane protein) (Photosystem II protein D1) - Marchantia polymorpha (Liverwort) & (atcg00020 : 606.0) Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core; photosystem II reaction center protein A (PSBA); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II reaction centre protein PsbA/D1 (InterPro:IPR005867), Photosynthetic reaction centre, L/M (InterPro:IPR000484); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein D (TAIR:ATCG00270.1). & (loc_os10g21200.1 : 606.0) no description available & (ipr000484 : 201.98564) Photosynthetic reaction centre, L/M & (reliability: 1212.0) & (original description: Photosystem II protein D1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbA PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'tr|a0t0b2|a0t0b2_phatc' "'(ipr000932 : 1500.0) Photosystem antenna protein-like & (gnl|cdd|79279 : 997.0) no description available & (q9muv7|psbb_mesvi : 774.0) Photosystem II P680 chlorophyll A apoprotein (CP-47 protein) - Mesostigma viride & (atcg00680 : 768.0) encodes for CP47, subunit of the photosystem II reaction center.; photosystem II reaction center protein B (PSBB); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction, photosystem II assembly; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II, PsbB (InterPro:IPR017486); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein C (TAIR:ATCG00280.1). & (loc_osp1g00600.1 : 758.0) no description available & (reliability: 1536.0) & (original description: Photosystem II CP47 reaction center protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbB PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'tr|a0t096|a0t096_phatc' "'(ipr000932 : 1500.0) Photosystem antenna protein-like & (gnl|cdd|79253 : 902.0) no description available & (p56308|psbc_chlvu : 749.0) Photosystem II 44 kDa reaction center protein (P6 protein) (CP43) - Chlorella vulgaris (Green alga) & (atcg00280 : 737.0) chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element.; photosystem II reaction center protein C (PSBC); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem antenna protein-like (InterPro:IPR000932), Photosystem II protein PsbC (InterPro:IPR005869); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein B (TAIR:ATCG00680.1). & (loc_osp1g00180.1 : 732.0) no description available & (reliability: 1474.0) & (original description: Photosystem II CP43 reaction center protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbC PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'sp|a0t097|psbd_phatc' "'(gnl|cdd|79223 : 664.0) no description available & (p56319|psbd_chlvu : 626.0) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII D2 protein) - Chlorella vulgaris (Green alga) & (loc_osp1g00170.1 : 615.0) no description available & (atcg00270 : 613.0) PSII D2 protein; photosystem II reaction center protein D (PSBD); FUNCTIONS IN: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport in photosystem II, photosynthesis, light harvesting in photosystem II; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosynthetic reaction centre, L/M (InterPro:IPR000484), Photosystem II reaction centre protein PsbD/D2 (InterPro:IPR005868); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein A (TAIR:ATCG00020.1). & (ipr000484 : 174.90115) Photosynthetic reaction centre, L/M & (reliability: 1226.0) & (original description: Photosystem II D2 protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbD PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'sp|a0t0a3|psbe_phatc' "'(gnl|cdd|79281 : 154.0) no description available & (q9muq0|psbe_mesvi : 135.0) Cytochrome b559 alpha subunit (PSII reaction center subunit V) - Mesostigma viride & (loc_osp1g00520.1 : 125.0) no description available & (atcg00580 : 122.0) PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized.; photosystem II reaction center protein E (PSBE); FUNCTIONS IN: electron carrier activity, heme binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein cytochrome b559, N-terminal (InterPro:IPR013081), Photosystem II protein cytochrome b559, conserved site (InterPro:IPR006216), Photosystem II protein cytochrome b559, alpha subunit, lumenal region (InterPro:IPR013082), Photosystem II protein cytochrome b559, alpha subunit (InterPro:IPR006217). & (ipr013082 : 55.07972) Photosystem II cytochrome b559, alpha subunit, lumenal region & (reliability: 244.0) & (original description: Cytochrome b559 subunit alpha OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbE PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'sp|a0t0a9|psbh_phatc' "'(gnl|cdd|79283 : 99.2) no description available & (q9tkw7|psbh_nepol : 83.6) Photosystem II reaction center protein H (PSII-H) (Photosystem II 10 kDa phosphoprotein) - Nephroselmis olivacea & (atcg00710 : 77.8) Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII.; photosystem II reaction center protein H (PSBH); FUNCTIONS IN: phosphate binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, oxygen evolving complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II phosphoprotein PsbH (InterPro:IPR001056). & (loc_osp1g00620.1 : 77.8) no description available & (ipr001056 : 64.29006) Photosystem II PsbH, phosphoprotein & (reliability: 155.6) & (original description: Photosystem II reaction center protein H OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbH PE=3 SV=1)'" P '1.1.1.2' 'PS.lightreaction.photosystem II.PSII polypeptide subunits' 'tr|b7fz96|b7fz96_phatc' "'(gnl|cdd|65505 : 245.0) no description available & (loc_os01g31690.1 : 211.0) no description available & (p14226|psbo_pea : 206.0) Oxygen-evolving enhancer protein 1, chloroplast precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) - Pisum sativum (Garden pea) & (at3g50820 : 192.0) Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.; photosystem II subunit O-2 (PSBO2); FUNCTIONS IN: oxygen evolving activity, poly(U) RNA binding; INVOLVED IN: photosynthesis, light reaction, photoinhibition, photosystem II assembly, photosystem II stabilization, regulation of protein amino acid dephosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 534 Blast hits to 532 proteins in 148 species: Archae - 0; Bacteria - 144; Metazoa - 1; Fungi - 0; Plants - 207; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (chl4|519678 : 189.0) no description available & (ipr002628 : 179.8501) Photosystem II PsbO, manganese-stabilising & (reliability: 698.7377) & (original description: Oxygen-evolving enhancer protein 1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PsbO PE=4 SV=1)'" P '1.1.1.3' 'PS.lightreaction.photosystem II.biogenesis' 'tr|b7g3a6|b7g3a6_phatc' "'(chl4|523339 : 306.0) no description available & (at5g23120 : 295.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 295.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 189.0) no description available & (gnl|cdd|38720 : 81.2) no description available & (reliability: 590.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47413 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fyl0|b7fyl0_phatc' "'(chl4|525343 : 172.0) no description available & (q03965|l181_chleu : 147.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 138.0) no description available & (ipr022796 : 84.790184) Chlorophyll A-B binding protein & (loc_os09g26810.1 : 76.6) no description available & (at2g34420 : 75.9) Photosystem II type I chlorophyll a/b-binding protein; photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (reliability: 149.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx1 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fvf9|b7fvf9_phatc' "'(chl4|525343 : 181.0) no description available & (q03965|l181_chleu : 153.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 137.0) no description available & (ipr022796 : 85.83053) Chlorophyll A-B binding protein & (at2g34420 : 73.9) Photosystem II type I chlorophyll a/b-binding protein; photosystem II light harvesting complex gene B1B2 (LHB1B2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1); Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2093; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). & (loc_os09g26810.1 : 72.0) no description available & (reliability: 141.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx3 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g5b6|b7g5b6_phatc' "'(gnl|cdd|84819 : 119.0) no description available & (ipr022796 : 56.87148) Chlorophyll A-B binding protein & (chl4|525378 : 43.1) no description available & (q03965|l181_chleu : 42.7) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os04g38410.1 : 40.0) no description available & (at1g15820 : 38.5) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (reliability: 77.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf10 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7gbk6|b7gbk6_phatc' "'(gnl|cdd|84819 : 148.0) no description available & (ipr022796 : 72.584114) Chlorophyll A-B binding protein & (chl4|525378 : 48.1) no description available & (at5g01530 : 45.4) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g37240.1 : 45.1) no description available & (q03965|l181_chleu : 44.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 86.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf11 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g871|b7g871_phatc' "'(gnl|cdd|84819 : 110.0) no description available & (ipr022796 : 53.780437) Chlorophyll A-B binding protein & (chl4|525378 : 49.7) no description available & (loc_os06g21590.1 : 48.9) no description available & (q03965|l181_chleu : 48.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at3g54890 : 43.9) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 87.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf13 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b5y5l4|b5y5l4_phatc' "'(gnl|cdd|84819 : 97.6) no description available & (chl4|525378 : 55.5) no description available & (q03965|l181_chleu : 54.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (ipr022796 : 51.929836) Chlorophyll A-B binding protein & (at3g54890 : 49.3) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (loc_os06g21590.1 : 44.7) no description available & (reliability: 98.6) & (original description: Fucoxanthin chlorophyll a/c protein, lhcf type OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf14 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fv42|b7fv42_phatc' "'(gnl|cdd|84819 : 88.4) no description available & (ipr022796 : 61.907433) Chlorophyll A-B binding protein & (chl4|525343 : 61.2) no description available & (at3g47470 : 57.4) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (q03965|l181_chleu : 57.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os06g21590.1 : 54.3) no description available & (reliability: 114.8) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf16 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7gc99|b7gc99_phatc' "'(gnl|cdd|84819 : 109.0) no description available & (ipr022796 : 57.56463) Chlorophyll A-B binding protein & (chl4|525378 : 55.1) no description available & (q03965|l181_chleu : 51.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os02g52650.1 : 43.9) no description available & (at3g54890 : 39.7) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 79.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf17 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7frw4|b7frw4_phatc' "'(gnl|cdd|84819 : 137.0) no description available & (ipr022796 : 69.969154) Chlorophyll A-B binding protein & (at2g40100 : 43.1) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.3); CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2). & (loc_os07g37240.1 : 42.7) no description available & (chl4|523315 : 41.2) no description available & (q93wd2|cb29_chlre : 40.0) Chlorophyll a-b binding protein CP29 - Chlamydomonas reinhardtii & (reliability: 83.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf2 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7frw2|b7frw2_phatc' "'(gnl|cdd|84819 : 139.0) no description available & (ipr022796 : 64.13591) Chlorophyll A-B binding protein & (chl4|525378 : 56.2) no description available & (q03965|l181_chleu : 50.4) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os07g37240.1 : 47.4) no description available & (at5g01530 : 47.0) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 90.2) & (original description: Protein fucoxanthin chlorophyl a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf4 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7gbk7|b7gbk7_phatc' "'(gnl|cdd|84819 : 144.0) no description available & (ipr022796 : 68.28909) Chlorophyll A-B binding protein & (chl4|525378 : 48.9) no description available & (at5g01530 : 45.4) light harvesting complex photosystem II (LHCB4.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g37240.1 : 45.4) no description available & (q03965|l181_chleu : 44.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 83.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf5 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g5s7|b7g5s7_phatc' "'(gnl|cdd|84819 : 117.0) no description available & (ipr022796 : 57.879337) Chlorophyll A-B binding protein & (chl4|525378 : 49.3) no description available & (q03965|l181_chleu : 48.5) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at3g61470 : 43.1) Encodes a component of the light harvesting antenna complex of photosystem I.; photosystem I light harvesting complex gene 2 (LHCA2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os07g37240.1 : 42.7) no description available & (reliability: 86.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf6 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g6y1|b7g6y1_phatc' "'(gnl|cdd|84819 : 135.0) no description available & (ipr022796 : 67.618935) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 44.3) no description available & (at3g54890 : 42.7) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (p20866|cb2_phypa : 41.2) Chlorophyll a-b binding protein, chloroplast precursor (LHCII type I CAB) (LHCP) - Physcomitrella patens (Moss) & (chl4|513866 : 40.8) no description available & (reliability: 85.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf8 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g955|b7g955_phatc' "'(gnl|cdd|84819 : 131.0) no description available & (ipr022796 : 62.92482) Chlorophyll A-B binding protein & (q03965|l181_chleu : 48.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at2g40100 : 45.4) Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II; light harvesting complex photosystem II (LHCB4.3); CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2). & (chl4|525378 : 45.4) no description available & (loc_os07g37240.1 : 45.1) no description available & (reliability: 83.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcf9 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fum6|b7fum6_phatc' "'(gnl|cdd|84819 : 114.0) no description available & (ipr022796 : 87.31591) Chlorophyll A-B binding protein & (chl4|525343 : 83.2) no description available & (at3g47470 : 71.2) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (q03965|l181_chleu : 66.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os07g38960.2 : 63.2) no description available & (reliability: 142.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr1 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7gcv9|b7gcv9_phatc' "'(gnl|cdd|84819 : 125.0) no description available & (at3g54890 : 82.8) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (loc_os06g21590.1 : 79.0) no description available & (ipr022796 : 77.64604) Chlorophyll A-B binding protein & (q03965|l181_chleu : 75.5) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (chl4|516832 : 74.7) no description available & (reliability: 165.6) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr10 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7gas4|b7gas4_phatc' "'(gnl|cdd|84819 : 105.0) no description available & (ipr022796 : 74.70438) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 74.7) no description available & (at3g54890 : 72.4) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (chl4|510281 : 60.5) no description available & (q03965|l181_chleu : 50.4) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 144.8) & (original description: Protein fucoxanthin chl a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr11 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fqe0|b7fqe0_phatc' "'(gnl|cdd|84819 : 92.6) no description available & (chl4|525378 : 61.6) no description available & (ipr022796 : 61.582012) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 60.1) no description available & (at3g54890 : 57.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (q03965|l181_chleu : 48.1) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 114.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr12 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g502|b7g502_phatc' "'(gnl|cdd|84819 : 109.0) no description available & (ipr022796 : 79.94862) Chlorophyll A-B binding protein & (chl4|525378 : 72.8) no description available & (loc_os06g21590.1 : 71.2) no description available & (at3g54890 : 70.5) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (q03965|l181_chleu : 64.3) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 141.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr13 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g503|b7g503_phatc' "'(gnl|cdd|84819 : 80.3) no description available & (chl4|513033 : 61.2) no description available & (ipr022796 : 53.15791) Chlorophyll A-B binding protein & (loc_os02g52650.1 : 52.0) no description available & (at3g47470 : 48.5) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (q03965|l181_chleu : 45.4) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 97.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr14 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g9b9|b7g9b9_phatc' "'(gnl|cdd|84819 : 117.0) no description available & (loc_os06g21590.1 : 89.0) no description available & (at1g45474 : 83.6) Encodes a component of the light harvesting complex of photosystem I.; photosystem I light harvesting complex gene 5 (LHCA5); FUNCTIONS IN: pigment binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, photosystem I antenna complex, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light-harvesting chlorophyll-protein complex I subunit A4 (TAIR:AT3G47470.1); Has 2339 Blast hits to 2263 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2004; Viruses - 0; Other Eukaryotes - 331 (source: NCBI BLink). & (chl4|524874 : 78.6) no description available & (ipr022796 : 75.19685) Chlorophyll A-B binding protein & (p13869|cb12_pethy : 62.4) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (reliability: 167.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr2 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fsp4|b7fsp4_phatc' "'(gnl|cdd|84819 : 115.0) no description available & (chl4|513033 : 73.9) no description available & (ipr022796 : 67.46812) Chlorophyll A-B binding protein & (at3g47470 : 65.5) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (p13869|cb12_pethy : 61.6) Chlorophyll a-b binding protein, chloroplast precursor (LHCI type II CAB) - Petunia hybrida (Petunia) & (loc_os06g21590.1 : 60.8) no description available & (reliability: 131.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr3 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fqe1|b7fqe1_phatc' "'(gnl|cdd|84819 : 95.3) no description available & (chl4|525378 : 68.2) no description available & (ipr022796 : 67.01069) Chlorophyll A-B binding protein & (loc_os02g52650.1 : 55.5) no description available & (q03965|l181_chleu : 54.7) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (at1g45474 : 53.5) Encodes a component of the light harvesting complex of photosystem I.; photosystem I light harvesting complex gene 5 (LHCA5); FUNCTIONS IN: pigment binding; INVOLVED IN: photosynthesis, light harvesting in photosystem I, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, photosystem I antenna complex, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light-harvesting chlorophyll-protein complex I subunit A4 (TAIR:AT3G47470.1); Has 2339 Blast hits to 2263 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2004; Viruses - 0; Other Eukaryotes - 331 (source: NCBI BLink). & (reliability: 107.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr4 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g4u8|b7g4u8_phatc' "'(gnl|cdd|84819 : 117.0) no description available & (chl4|525378 : 83.6) no description available & (loc_os06g21590.1 : 80.5) no description available & (at3g54890 : 79.0) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (ipr022796 : 73.500404) Chlorophyll A-B binding protein & (q03965|l181_chleu : 71.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (reliability: 158.0) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr6 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fqs0|b7fqs0_phatc' "'(gnl|cdd|84819 : 118.0) no description available & (chl4|513033 : 84.3) no description available & (p27494|cb23_tobac : 77.0) Chlorophyll a-b binding protein 36, chloroplast precursor (LHCII type I CAB-36) (LHCP) - Nicotiana tabacum (Common tobacco) & (at3g54890 : 76.6) Encodes a component of the light harvesting complex associated with photosystem I.; photosystem I light harvesting complex gene 1 (LHCA1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, photosynthesis, light harvesting in photosystem I, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, chloroplast thylakoid membrane, chloroplast, plastoglobule, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT2G40100.1); Has 2134 Blast hits to 2063 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (ipr022796 : 76.38579) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 70.5) no description available & (reliability: 153.2) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcr8 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fr60|b7fr60_phatc' "'(chl4|525378 : 166.0) no description available & (q03965|l181_chleu : 136.0) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (gnl|cdd|84819 : 124.0) no description available & (ipr022796 : 79.28214) Chlorophyll A-B binding protein & (loc_os03g39610.2 : 67.0) no description available & (at1g29920 : 64.7) Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.; chlorophyll A/B-binding protein 2 (CAB2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast; EXPRESSED IN: 13 plant structures; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 (TAIR:AT1G29910.1); Has 2420 Blast hits to 2340 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 122.4) & (original description: Protein fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Lhcx2 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7fpl6|b7fpl6_phatc' "'(gnl|cdd|84819 : 91.5) no description available & (chl4|525343 : 62.4) no description available & (ipr022796 : 61.76433) Chlorophyll A-B binding protein & (q03965|l181_chleu : 56.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (loc_os09g26810.1 : 43.5) no description available & (at1g15820 : 42.4) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.; light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink). & (reliability: 84.0) & (original description: Fucoxanthin chlorophyll a/c protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17531 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7ge80|b7ge80_phatc' "'(gnl|cdd|84819 : 81.5) no description available & (at3g47470 : 46.6) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (chl4|510281 : 44.7) no description available & (ipr022796 : 43.218487) Chlorophyll A-B binding protein & (loc_os06g21590.1 : 42.7) no description available & (p08963|cb22_horvu : 38.9) Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP) - Hordeum vulgare (Barley) & (reliability: 93.2) & (original description: Fucoxanthin chlorophyll a/c protein, deviant OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24119 PE=4 SV=1)'" P '1.1.2.1' 'PS.lightreaction.photosystem I.LHC-I' 'tr|b7g8e5|b7g8e5_phatc' "'(gnl|cdd|84819 : 74.5) no description available & (ipr022796 : 47.712433) Chlorophyll A-B binding protein & (q03965|l181_chleu : 46.6) Chlorophyll a-b binding protein L1818, chloroplast precursor - Chlamydomonas eugametos & (chl4|523536 : 46.2) no description available & (at3g47470 : 43.1) Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.; light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). & (loc_os08g33820.1 : 40.4) no description available & (reliability: 86.2) & (original description: Fucoxanthin chlorophyll a/c protein, deviant OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48798 PE=4 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'sp|a0t0l9|psaa_phatc' "'(ipr001280 : 1500.0) Photosystem I PsaA/PsaB & (gnl|cdd|79273 : 1414.0) no description available & (p56341|psaa_chlvu : 1241.0) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA) (PSI-A) - Chlorella vulgaris (Green alga) & (atcg00350 : 1200.0) Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome.; PSAA; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586), Photosystem I psaA (InterPro:IPR006243); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00340.1). & (loc_osp1g00340.1 : 1178.0) no description available & (gnl|cdd|36381 : 35.4) no description available & (reliability: 2400.0) & (original description: Photosystem I P700 chlorophyll a apoprotein A1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaA PE=3 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'sp|a0t0m7|psab_phatc' "'(ipr001280 : 1500.0) Photosystem I PsaA/PsaB & (gnl|cdd|79272 : 1368.0) no description available & (q9mur7|psab_mesvi : 1170.0) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB) (PSI-B) - Mesostigma viride & (loc_osp1g00330.1 : 1127.0) no description available & (atcg00340 : 1126.0) Encodes the D1 subunit of photosystem I and II reaction centers.; PSAB; FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting in photosystem II, photosynthesis, light harvesting in photosystem I; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I psaB (InterPro:IPR006244), Photosystem I, PsaA/PsaB (InterPro:IPR001280), Photosystem I psaA/psaB, conserved site (InterPro:IPR020586); BEST Arabidopsis thaliana protein match is: Photosystem I, PsaA/PsaB protein (TAIR:ATCG00350.1). & (reliability: 2252.0) & (original description: Photosystem I P700 chlorophyll a apoprotein A2 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaB PE=3 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'sp|a0t0l2|psac_phatc' "'(gnl|cdd|79282 : 141.0) no description available & (q8m9u0|psac_chagl : 133.0) Photosystem I iron-sulfur center (Photosystem I subunit VII) (9 kDa polypeptide) (PSI-C) (PsaC) - Chaetosphaeridium globosum & (atcg01060 : 131.0) Encodes the PsaC subunit of photosystem I.; PSAC; FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, electron carrier activity, iron-sulfur cluster binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, photosystem I, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Photosystem I, PsaC (InterPro:IPR017491). & (loc_osp1g00920.1 : 130.0) no description available & (gnl|cdd|38466 : 35.4) no description available & (reliability: 262.0) & (original description: Photosystem I iron-sulfur center OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaC PE=3 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'tr|a0t0b9|a0t0b9_phatc' "'(gnl|cdd|79357 : 255.0) no description available & (ipr003685 : 169.9213) Photosystem I PsaD & (loc_os08g44680.1 : 164.0) no description available & (p32869|psad_cucsa : 163.0) Photosystem I reaction center subunit II, chloroplast precursor (Photosystem I 20 kDa subunit) (PSI-D) (PS I subunit 5) - Cucumis sativus (Cucumber) & (at4g02770 : 162.0) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1); photosystem I subunit D-1 (PSAD-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I protein PsaD (InterPro:IPR003685); BEST Arabidopsis thaliana protein match is: photosystem I subunit D-2 (TAIR:AT1G03130.1); Has 510 Blast hits to 510 proteins in 137 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 3; Other Eukaryotes - 198 (source: NCBI BLink). & (chl4|522766 : 140.0) no description available & (reliability: 621.3623) & (original description: Photosystem I ferredoxin-binding protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaD PE=4 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'sp|a0t0f3|psae_phatc' "'(gnl|cdd|79338 : 103.0) no description available & (p12352|psae_chlre : 80.9) Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) (Photosystem I 8.1 kDa protein) (P30 protein) - Chlamydomonas reinhardtii & (chl4|509622 : 80.9) no description available & (loc_os07g25430.3 : 74.3) no description available & (at4g28750 : 71.6) mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I; PSA E1 KNOCKOUT (PSAE-1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: photosystem I subunit E-2 (TAIR:AT2G20260.1); Has 449 Blast hits to 449 proteins in 133 species: Archae - 0; Bacteria - 180; Metazoa - 5; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). & (ipr003375 : 71.04366) Photosystem I PsaE, reaction centre subunit IV & (reliability: 267.5264) & (original description: Photosystem I reaction center subunit IV OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaE PE=3 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'tr|a0t0m1|a0t0m1_phatc' "'(gnl|cdd|79344 : 297.0) no description available & (ipr003666 : 180.23651) Photosystem I PsaF, reaction centre subunit III & (at1g31330 : 178.0) Encodes subunit F of photosystem I.; photosystem I subunit F (PSAF); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre protein PsaF, subunit III (InterPro:IPR003666); Has 387 Blast hits to 387 proteins in 119 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 6; Other Eukaryotes - 163 (source: NCBI BLink). & (p12356|psaf_chlre : 176.0) Photosystem I reaction center subunit III, chloroplast precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) (P21 protein) - Chlamydomonas reinhardtii & (chl4|526339 : 176.0) no description available & (loc_os03g56670.2 : 172.0) no description available & (reliability: 671.4139) & (original description: Photosystem I protein F OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaF PE=4 SV=1)'" P '1.1.2.2' 'PS.lightreaction.photosystem I.PSI polypeptide subunits' 'sp|a0t0m6|psal_phatc' "'(gnl|cdd|79333 : 217.0) no description available & (ipr003757 : 144.96754) Photosystem I PsaL, reaction centre subunit XI & (chl4|512552 : 114.0) no description available & (p23993|psal_horvu : 99.8) Photosystem I reaction center subunit XI, chloroplast precursor (PSI-L) (PSI subunit V) - Hordeum vulgare (Barley) & (loc_os12g23200.2 : 96.3) no description available & (at4g12800 : 90.9) Encodes subunit L of photosystem I reaction center.; photosystem I subunit l (PSAL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis, light reaction, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, subunit XI PsaL (InterPro:IPR003757); Has 443 Blast hits to 443 proteins in 121 species: Archae - 0; Bacteria - 178; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 435.49323) & (original description: Photosystem I reaction center subunit XI OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psaL PE=3 SV=1)'" P '1.1.3' 'PS.lightreaction.cytochrome b6/f' 'tr|b5y3c9|b5y3c9_phatc' "'(gnl|cdd|58541 : 221.0) no description available & (q7x9a6|ucria_wheat : 220.0) Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (ISP) (RISP) - Triticum aestivum (Wheat) & (loc_os07g37030.1 : 216.0) no description available & (chl4|518044 : 207.0) no description available & (at4g03280 : 197.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (gnl|cdd|36884 : 100.0) no description available & (ipr017941 : 79.10887) Rieske [2Fe-2S] iron-sulphur domain & (reliability: 394.0) & (original description: Cytochrome b6-f complex iron-sulfur subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_13358 PE=4 SV=1)'" P '1.1.3.2' 'PS.lightreaction.cytochrome b6/f.subunit 4 (PETD)' 'sp|a0t0b7|petd_phatc' "'(gnl|cdd|79275 : 268.0) no description available & (q6ew21|petd_nymal : 229.0) Cytochrome b6-f complex subunit 4 (17 kDa polypeptide) - Nymphaea alba (White water-lily) & (atcg00730 : 226.0) A chloroplast gene encoding subunit IV of the cytochrome b6/f complex; photosynthetic electron transfer D (PETD); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Cytochrome b/b6, C-terminal (InterPro:IPR005798), Cytochrome b6/f complex, subunit IV (InterPro:IPR005870); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (loc_osp1g00650.1 : 224.0) no description available & (gnl|cdd|39862 : 126.0) no description available & (ipr016175 : 63.19145) Cytochrome b/b6 & (reliability: 452.0) & (original description: Cytochrome b6-f complex subunit 4 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=petD PE=3 SV=1)'" P '1.1.3.3' 'PS.lightreaction.cytochrome b6/f.cytochrome b6 (CYB6)' 'sp|a0t0b8|cyb6_phatc' "'(gnl|cdd|79287 : 392.0) no description available & (p00165|cyb6_spiol : 328.0) Cytochrome b6 - Spinacia oleracea (Spinach) & (atcg00720 : 325.0) Encodes the cytochrome b(6) subunit of the cytochrome b6f complex.; photosynthetic electron transfer B (PETB); FUNCTIONS IN: heme binding; INVOLVED IN: photosynthesis, light reaction; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1). & (loc_osp1g00640.1 : 325.0) no description available & (gnl|cdd|39862 : 223.0) no description available & (ipr016175 : 189.44685) Cytochrome b/b6 & (reliability: 650.0) & (original description: Cytochrome b6 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=petB PE=3 SV=1)'" P '1.1.3.4' 'PS.lightreaction.cytochrome b6/f.apocytochrome f (CYF)' 'sp|a0t0c9|cyf_phatc' "'(gnl|cdd|79255 : 443.0) no description available & (p23577|cyf_chlre : 322.0) Apocytochrome f precursor - Chlamydomonas reinhardtii & (atcg00540 : 317.0) Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2.; photosynthetic electron transfer A (PETA); FUNCTIONS IN: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; INVOLVED IN: photosynthetic electron transport in cytochrome b6/f; LOCATED IN: thylakoid, chloroplast thylakoid membrane, cytochrome b6f complex, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome f (InterPro:IPR002325), Rudiment single hybrid motif (InterPro:IPR011054). & (loc_osp1g00480.1 : 308.0) no description available & (ipr002325 : 204.83476) Cytochrome f & (reliability: 634.0) & (original description: Cytochrome f OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=petA PE=3 SV=1)'" P '1.1.4.1' 'PS.lightreaction.ATP synthase.alpha subunit' 'sp|a0t0f1|atpa_phatc' "'(gnl|cdd|79276 : 875.0) no description available & (q6yxk3|atpa_phypa : 719.0) ATP synthase subunit alpha (EC 3.6.3.14) (ATPase subunit alpha) (ATP synthase F1 sector subunit alpha) - Physcomitrella patens (Moss) & (atcg00120 : 691.0) Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.; ATP synthase subunit alpha (ATPA); FUNCTIONS IN: zinc ion binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, dATP biosynthetic process from ADP; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, alpha subunit, C-terminal (InterPro:IPR017458), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1 complex, alpha subunit (InterPro:IPR005294), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, alpha subunit protein (TAIR:AT2G07698.1). & (loc_os10g38270.1 : 664.0) no description available & (chl4|519346 : 514.0) no description available & (gnl|cdd|36567 : 256.0) no description available & (ipr000194 : 162.74161) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain & (reliability: 1382.0) & (original description: ATP synthase subunit alpha, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpA PE=3 SV=1)'" P '1.1.4.2' 'PS.lightreaction.ATP synthase.beta subunit' 'sp|a0t0d2|atpb_phatc' "'(gnl|cdd|79277 : 863.0) no description available & (gnl|cdd|36564 : 742.0) no description available & (p06541|atpb_chlre : 707.0) ATP synthase subunit beta (EC 3.6.3.14) (ATPase subunit beta) (ATP synthase F1 sector subunit beta) - Chlamydomonas reinhardtii & (atcg00480 : 689.0) chloroplast-encoded gene for beta subunit of ATP synthase; ATP synthase subunit beta (PB); FUNCTIONS IN: hydrogen ion transmembrane transporter activity, zinc ion binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cold, ATP synthesis coupled proton transport; LOCATED IN: in 11 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1). & (loc_osp1g00410.1 : 687.0) no description available & (chl4|517045 : 612.0) no description available & (ipr000194 : 138.48361) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain & (reliability: 1378.0) & (original description: ATP synthase subunit beta, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpB PE=3 SV=1)'" P '1.1.4.3' 'PS.lightreaction.ATP synthase.epsilon chain' 'sp|a0t0d1|atpe_phatc' "'(gnl|cdd|79280 : 169.0) no description available & (q8s8w9|atpe_atrbe : 110.0) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1 sector epsilon subunit) - Atropa belladonna (Belladonna) (Deadly nightshade) & (atcg00470 : 97.1) ATPase epsilon subunit; ATP synthase epsilon chain (ATPE); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, delta/epsilon subunit, N-terminal (InterPro:IPR020546), ATPase, F1 complex, delta/epsilon subunit, C-terminal (InterPro:IPR020547), ATPase, F1 complex, delta/epsilon subunit (InterPro:IPR001469). & (loc_os01g58000.1 : 95.5) no description available & (gnl|cdd|36969 : 75.8) no description available & (ipr020546 : 52.864147) ATPase, F1 complex, delta/epsilon subunit, N-terminal & (reliability: 194.2) & (original description: ATP synthase epsilon chain, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpE PE=3 SV=1)'" P '1.1.4.4' 'PS.lightreaction.ATP synthase.gamma chain' 'tr|b7g0m9|b7g0m9_phatc' "'(gnl|cdd|84628 : 338.0) no description available & (at4g04640 : 316.0) One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.; ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29790|atpg_tobac : 312.0) ATP synthase gamma chain, chloroplast precursor (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco) & (chl4|523035 : 301.0) no description available & (loc_os07g32880.1 : 290.0) no description available & (ipr000131 : 218.88484) ATPase, F1 complex, gamma subunit & (gnl|cdd|36744 : 215.0) no description available & (reliability: 632.0) & (original description: Precursor of ATPase ATPase gamma subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AtpC PE=3 SV=1)'" P '1.1.4.5' 'PS.lightreaction.ATP synthase.subunit C' 'sp|a0t0e7|atph_phatc' "'(gnl|cdd|79278 : 110.0) no description available & (p41603|atph_pinth : 84.7) ATP synthase C chain (EC 3.6.3.14) (Lipid-binding protein) (ATPase subunit III) - Pinus thunbergii (Green pine) (Japanese black pine) & (atcg00140 : 81.6) ATPase III subunit; ATPH; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit C, DCCD-binding site (InterPro:IPR020537), ATPase, F0/V0 complex, subunit C (InterPro:IPR002379), ATPase, F0 complex, subunit C (InterPro:IPR000454), ATPase, F0 complex, subunit C, bacterial/chloroplast (InterPro:IPR005953). & (loc_osp1g00290.1 : 80.5) no description available & (ipr002379 : 62.48451) ATPase, F0/V0 complex, subunit C & (gnl|cdd|35453 : 54.1) no description available & (reliability: 163.2) & (original description: ATP synthase subunit c, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpH PE=3 SV=1)'" P '1.1.4.7' 'PS.lightreaction.ATP synthase.delta chain' 'sp|a0t0f0|atpd_phatc' "'(gnl|cdd|79332 : 180.0) no description available & (ipr000711 : 96.95704) ATPase, F1 complex, OSCP/delta subunit & (q42687|atpd_chlre : 88.2) ATP synthase delta chain, chloroplast precursor (EC 3.6.3.14) - Chlamydomonas reinhardtii & (chl4|518160 : 88.2) no description available & (gnl|cdd|36875 : 81.5) no description available & (loc_os02g51470.3 : 68.6) no description available & (at4g09650 : 66.2) Encodes the chloroplast ATPase delta-subunit.; ATP synthase delta-subunit gene (ATPD); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: response to cold, defense response to bacterium, photosynthetic electron transport in photosystem I, photosynthetic electron transport in photosystem II, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit, conserved site (InterPro:IPR020781), ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 4372 Blast hits to 4372 proteins in 1436 species: Archae - 0; Bacteria - 2635; Metazoa - 155; Fungi - 114; Plants - 153; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (reliability: 132.4) & (original description: ATP synthase subunit delta, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpD PE=3 SV=1)'" P '1.1.4.8' 'PS.lightreaction.ATP synthase.subunit B (ATPF)' 'sp|a0t0e9|atpf_phatc' "'(gnl|cdd|82205 : 77.2) no description available & (q85al8|atpf_antfo : 74.3) ATP synthase B chain (EC 3.6.3.14) (ATPase subunit I) - Anthoceros formosae (Hornwort) & (ipr002146 : 55.99601) ATPase, F0 complex, subunit B/B', bacterial/chloroplast & (loc_osp1g00300.1 : 48.5) no description available & (gnl|cdd|36212 : 44.0) no description available & (atcg00130 : 40.8) ATPase F subunit.; ATPF; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: cellular respiration, mitochondrial ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146). & (reliability: 81.6) & (original description: ATP synthase subunit b, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpF PE=3 SV=1)'" P '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'tr|b7frn6|b7frn6_phatc' "'(at4g11960 : 135.0) Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).; PGR5-like B (PGRL1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-LIKE A (TAIR:AT4G22890.4). & (loc_os08g41460.2 : 135.0) no description available & (chl4|524774 : 127.0) no description available & (gnl|cdd|33474 : 35.0) no description available & (reliability: 270.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42543 PE=4 SV=1)'" P '1.1.40' 'PS.lightreaction.cyclic electron flow-chlororespiration' 'tr|b7fvh9|b7fvh9_phatc' "'(loc_os08g45190.1 : 62.8) no description available & (at2g05620 : 60.8) Involved in electron flow in Photosystem I. Essential for photoprotection.; proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (chl4|522606 : 57.4) no description available & (reliability: 121.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44748 PE=4 SV=1)'" P '1.1.5' 'PS.lightreaction.other electron carrier (ox/red)' 'tr|b5y578|b5y578_phatc' "'(p08197|cyc6_chlre : 85.9) Cytochrome c6, chloroplast precursor (Soluble cytochrome f) (Cytochrome c553) (Cytochrome c-553) (Cytochrome c-552) - Chlamydomonas reinhardtii & (chl4|516039 : 85.9) no description available & (ipr009056 : 58.837593) Cytochrome c domain & (at5g45040 : 50.8) Cytochrome c; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|84459 : 46.6) no description available & (loc_os07g38000.1 : 43.1) no description available & (reliability: 101.6) & (original description: Cytochrome c6, cytochrome c553 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PetJ PE=3 SV=1)'" P '1.1.5.2' 'PS.lightreaction.other electron carrier (ox/red).ferredoxin' 'tr|a0t0c8|a0t0c8_phatc' "'(gnl|cdd|79346 : 152.0) no description available & (p00228|fer_wheat : 127.0) Ferredoxin, chloroplast precursor - Triticum aestivum (Wheat) & (chl4|515525 : 125.0) no description available & (at1g60950 : 124.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (loc_os08g01380.1 : 123.0) no description available & (ipr012675 : 77.25827) Beta-grasp domain & (reliability: 248.0) & (original description: Ferredoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=petF PE=3 SV=1)'" P '1.1.6' 'PS.lightreaction.NADH DH' 'tr|b7g2v7|b7g2v7_phatc' "'(chl4|521739 : 43.5) no description available & (at4g37920 : 38.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (loc_os01g20110.2 : 36.2) no description available & (gnl|cdd|37623 : 35.8) no description available & (reliability: 77.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47215 PE=4 SV=1)'" P '1.2.2' 'PS.photorespiration.glycolate oxydase' 'tr|b7fug8|b7fug8_phatc' "'(gnl|cdd|85224 : 326.0) no description available & (gnl|cdd|35758 : 307.0) no description available & (ipr013785 : 272.35898) Aldolase-type TIM barrel & (at4g18360 : 220.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 9948 Blast hits to 9918 proteins in 1541 species: Archae - 28; Bacteria - 4496; Metazoa - 367; Fungi - 686; Plants - 255; Viruses - 0; Other Eukaryotes - 4116 (source: NCBI BLink). & (loc_os04g53210.2 : 216.0) no description available & (p05414|gox_spiol : 207.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (chl4|520884 : 195.0) no description available & (reliability: 440.0) & (original description: Glycolate oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50804 PE=3 SV=1)'" P '1.2.3' 'PS.photorespiration.aminotransferases peroxisomal' 'tr|b7fuh0|b7fuh0_phatc' "'(gnl|cdd|35479 : 549.0) no description available & (at1g72330 : 467.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 462.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (loc_os07g42600.1 : 457.0) no description available & (chl4|523569 : 457.0) no description available & (gnl|cdd|30785 : 210.0) no description available & (ipr015421 : 126.98467) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 862.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34010 PE=4 SV=1)'" P '1.2.4.1' 'PS.photorespiration.glycine cleavage.P subunit' 'tr|b7g5z8|b7g5z8_phatc' "'(gnl|cdd|81549 : 1575.0) no description available & (ipr020580 : 1500.0) Glycine cleavage system P-protein, N-terminal & (gnl|cdd|37251 : 1353.0) no description available & (p26969|gcsp_pea : 993.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Pisum sativum (Garden pea) & (at2g26080 : 990.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (chl4|513576 : 969.0) no description available & (loc_os01g51410.1 : 953.0) no description available & (reliability: 1980.0) & (original description: Glycine cleavage system P protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GDCP PE=3 SV=1)'" P '1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'tr|b5y594|b5y594_phatc' "'(ipr001085 : 1500.0) Serine hydroxymethyltransferase & (gnl|cdd|37678 : 725.0) no description available & (loc_os12g22030.1 : 607.0) no description available & (at4g13930 : 600.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (chl4|523766 : 597.0) no description available & (gnl|cdd|64334 : 576.0) no description available & (p49357|glym_flapr : 548.0) Serine hydroxymethyltransferase 1, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Flaveria pringlei & (reliability: 3735.0) & (original description: Serine hydroxymethyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SHMT PE=3 SV=1)'" P '1.2.5' 'PS.photorespiration.serine hydroxymethyltransferase' 'tr|b7fq66|b7fq66_phatc' "'(ipr001085 : 1500.0) Serine hydroxymethyltransferase & (gnl|cdd|37678 : 749.0) no description available & (p50433|glym_soltu : 650.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Solanum tuberosum (Potato) & (at4g37930 : 648.0) Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.; serine transhydroxymethyltransferase 1 (SHM1); FUNCTIONS IN: poly(U) RNA binding, glycine hydroxymethyltransferase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 9 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine hydroxymethyltransferase 2 (TAIR:AT5G26780.1); Has 11621 Blast hits to 11596 proteins in 2825 species: Archae - 258; Bacteria - 6371; Metazoa - 337; Fungi - 287; Plants - 346; Viruses - 6; Other Eukaryotes - 4016 (source: NCBI BLink). & (loc_os03g52840.1 : 647.0) no description available & (chl4|516335 : 634.0) no description available & (gnl|cdd|64334 : 590.0) no description available & (reliability: 3731.0) & (original description: Serine hydroxymethyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SHMT2 PE=3 SV=1)'" P '1.2.6' 'PS.photorespiration.hydroxypyruvate reductase' 'tr|b7g8z0|b7g8z0_phatc' "'(chl4|516867 : 265.0) no description available & (gnl|cdd|30460 : 238.0) no description available & (gnl|cdd|35292 : 163.0) no description available & (ipr016040 : 128.84946) NAD(P)-binding domain & (loc_os06g44460.1 : 107.0) no description available & (at1g17745 : 105.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (q9sxp2|fdh1_orysa : 81.3) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: 2-hydroxyacid dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48946 PE=3 SV=1)'" P '1.3.1' 'PS.calvin cycle.rubisco large subunit' 'sp|q9tk52|rbl_phatc' "'(ipr000685 : 1500.0) Ribulose bisphosphate carboxylase, large subunit, C-terminal & (gnl|cdd|79258 : 847.0) no description available & (atcg00490 : 526.0) large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RBCL; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: response to cadmium ion, carbon fixation, peptidyl-cysteine S-nitrosylation, response to abscisic acid stimulus; LOCATED IN: in 10 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, large subunit, C-terminal (InterPro:IPR000685), Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (InterPro:IPR017443), Ribulose bisphosphate carboxylase, large subunit, N-terminal (InterPro:IPR017444), Ribulose bisphosphate carboxylase, large chain, active site (InterPro:IPR020878); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase large chain, catalytic domain (TAIR:AT2G07732.1). & (p48706|rbl_lacsa : 526.0) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) - Lactuca sativa (Garden lettuce) & (loc_osp1g00420.1 : 518.0) no description available & (reliability: 1052.0) & (original description: Ribulose bisphosphate carboxylase large chain OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rbcL PE=3 SV=1)'" P '1.3.11' 'PS.calvin cycle.RPE' 'tr|b7frg3|b7frg3_phatc' "'(gnl|cdd|76837 : 316.0) no description available & (ipr013785 : 216.84348) Aldolase-type TIM barrel & (chl4|513098 : 195.0) no description available & (gnl|cdd|38321 : 195.0) no description available & (q43843|rpe_soltu : 194.0) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) - Solanum tuberosum (Potato) & (loc_os03g07300.1 : 193.0) no description available & (at5g61410 : 190.0) Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA; D-ribulose-5-phosphate-3-epimerase (RPE); FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: response to cold, carbohydrate metabolic process, response to nematode, embryo development ending in seed dormancy; LOCATED IN: thylakoid, apoplast, stromule, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate 3-epimerase (InterPro:IPR000056), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G01850.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 716.28766) & (original description: Ribulose-phosphate 3-epimerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rpe PE=3 SV=1)'" P '1.3.12' 'PS.calvin cycle.PRK' 'tr|b5y5f0|b5y5f0_phatc' "'(loc_os02g47020.1 : 427.0) no description available & (p26302|kppr_wheat : 423.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (gnl|cdd|30199 : 422.0) no description available & (at1g32060 : 413.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (chl4|514003 : 409.0) no description available & (gnl|cdd|39404 : 177.0) no description available & (ipr006083 : 172.43152) Phosphoribulokinase/uridine kinase & (reliability: 826.0) & (original description: Phosphoribulokinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Prk PE=3 SV=1)'" P '1.3.13' 'PS.calvin cycle.rubisco interacting' 'tr|b7fnw3|b7fnw3_phatc' "'(loc_os09g24530.1 : 150.0) no description available & (chl4|516263 : 138.0) no description available & (p94026|rbcmt_tobac : 134.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (at1g14030 : 129.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (gnl|cdd|36551 : 86.7) no description available & (gnl|cdd|87855 : 45.7) no description available & (ipr015353 : 40.085556) Rubisco LS methyltransferase, substrate-binding domain & (reliability: 258.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42601 PE=4 SV=1)'" P '1.3.13' 'PS.calvin cycle.rubisco interacting' 'tr|b5y418|b5y418_phatc' "'(loc_os12g13460.1 : 119.0) no description available & (gnl|cdd|36551 : 114.0) no description available & (at5g14260 : 112.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43088|rbcmt_pea : 105.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (chl4|513361 : 97.4) no description available & (gnl|cdd|87855 : 66.1) no description available & (ipr015353 : 52.489452) Rubisco LS methyltransferase, substrate-binding domain & (reliability: 216.0) & (original description: Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rbcMT PE=4 SV=1)'" P '1.3.2' 'PS.calvin cycle.rubisco small subunit' 'tr|a0t0e2|a0t0e2_phatc' "'(gnl|cdd|79342 : 231.0) no description available & (ipr000894 : 113.74296) Ribulose bisphosphate carboxylase, small chain & (p04714|rbs1_pethy : 68.9) Ribulose bisphosphate carboxylase small chain SSU8, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) - Petunia hybrida (Petunia) & (chl4|519412 : 65.5) no description available & (loc_os02g05830.1 : 64.7) no description available & (at5g38410 : 58.5) Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 316.05017) & (original description: Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rbcS PE=4 SV=1)'" P '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'tr|b7g938|b7g938_phatc' "'(ipr001576 : 1500.0) Phosphoglycerate kinase & (gnl|cdd|80491 : 540.0) no description available & (gnl|cdd|36581 : 450.0) no description available & (chl4|520052 : 437.0) no description available & (q9sbn4|pgkh_volca : 435.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 424.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (loc_os02g07260.2 : 420.0) no description available & (reliability: 848.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGK PE=3 SV=1)'" P '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'tr|b7g5g4|b7g5g4_phatc' "'(ipr001576 : 1500.0) Phosphoglycerate kinase & (gnl|cdd|80491 : 560.0) no description available & (chl4|520052 : 500.0) no description available & (q9sbn4|pgkh_volca : 494.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at1g56190 : 476.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g07260.2 : 470.0) no description available & (gnl|cdd|36581 : 437.0) no description available & (reliability: 952.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29157 PE=3 SV=1)'" P '1.3.3' 'PS.calvin cycle.phosphoglycerate kinase' 'tr|b7g6h0|b7g6h0_phatc' "'(gnl|cdd|80491 : 429.0) no description available & (gnl|cdd|36581 : 350.0) no description available & (ipr001576 : 285.11508) Phosphoglycerate kinase & (p29409|pgkh_spiol : 285.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) (Fragment) - Spinacia oleracea (Spinach) & (at3g12780 : 276.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (chl4|520052 : 271.0) no description available & (loc_os06g45710.1 : 268.0) no description available & (reliability: 552.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51125 PE=3 SV=1)'" P '1.3.4' 'PS.calvin cycle.GAP' 'tr|b7gc94|b7gc94_phatc' "'(gnl|cdd|82756 : 425.0) no description available & (chl4|525071 : 357.0) no description available & (q09054|g3pd_maize : 259.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 (EC 1.2.1.12) - Zea mays (Maize) & (at1g79530 : 253.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (loc_os08g03290.1 : 253.0) no description available & (gnl|cdd|35876 : 187.0) no description available & (ipr016040 : 135.0196) NAD(P)-binding domain & (reliability: 462.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GAPDH_3 PE=3 SV=1)'" P '1.3.5' 'PS.calvin cycle.TPI' 'tr|b7fsq0|b7fsq0_phatc' "'(gnl|cdd|80468 : 279.0) no description available & (gnl|cdd|36856 : 202.0) no description available & (ipr013785 : 185.20107) Aldolase-type TIM barrel & (loc_os09g36450.1 : 171.0) no description available & (p46225|tpic_secce : 169.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 167.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (chl4|511212 : 159.0) no description available & (reliability: 334.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18228 PE=3 SV=1)'" P '1.3.5' 'PS.calvin cycle.TPI' 'tr|b7ft67|b7ft67_phatc' "'(gnl|cdd|80468 : 268.0) no description available & (gnl|cdd|36856 : 200.0) no description available & (ipr013785 : 188.28136) Aldolase-type TIM barrel & (loc_os09g36450.1 : 176.0) no description available & (p12863|tpis_maize : 173.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Zea mays (Maize) & (at2g21170 : 166.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (chl4|511212 : 155.0) no description available & (reliability: 332.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50738 PE=3 SV=1)'" P '1.3.5' 'PS.calvin cycle.TPI' 'tr|b7g3c1|b7g3c1_phatc' "'(gnl|cdd|36856 : 296.0) no description available & (gnl|cdd|73362 : 295.0) no description available & (p12863|tpis_maize : 246.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Zea mays (Maize) & (loc_os01g05490.1 : 238.0) no description available & (at3g55440 : 230.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (chl4|511212 : 219.0) no description available & (ipr013785 : 207.81247) Aldolase-type TIM barrel & (reliability: 458.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TIM_1 PE=3 SV=1)'" P '1.3.6' 'PS.calvin cycle.aldolase' 'tr|b7frc1|b7frc1_phatc' "'(gnl|cdd|81553 : 451.0) no description available & (ipr013785 : 208.22691) Aldolase-type TIM barrel & (gnl|cdd|36770 : 50.7) no description available & (chl4|522439 : 42.7) no description available & (at2g01140 : 42.4) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink). & (q01517|alfd_pea : 41.6) Fructose-bisphosphate aldolase 2, chloroplast (EC 4.1.2.13) - Pisum sativum (Garden pea) & (loc_os11g07020.2 : 40.4) no description available & (reliability: 84.8) & (original description: Cytosolic aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Fba4 PE=4 SV=1)'" P '1.3.6' 'PS.calvin cycle.aldolase' 'tr|b7ge67|b7ge67_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|84661 : 532.0) no description available & (gnl|cdd|36770 : 467.0) no description available & (at4g38970 : 367.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 366.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (loc_os11g07020.1 : 366.0) no description available & (chl4|522439 : 350.0) no description available & (reliability: 734.0) & (original description: Fructose-bisphosphate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FbaC5 PE=3 SV=1)'" P '1.3.8' 'PS.calvin cycle.transketolase' 'tr|b7g5r3|b7g5r3_phatc' "'(ipr005474 : 1500.0) Transketolase, N-terminal & (gnl|cdd|30371 : 888.0) no description available & (loc_os06g04270.1 : 615.0) no description available & (q7sic9|tktc_maize : 612.0) Transketolase, chloroplast (EC 2.2.1.1) (TK) - Zea mays (Maize) & (chl4|518554 : 610.0) no description available & (at2g45290 : 605.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|35743 : 602.0) no description available & (reliability: 1210.0) & (original description: Transketolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29260 PE=4 SV=1)'" P '1.3.8' 'PS.calvin cycle.transketolase' 'tr|b7fuu0|b7fuu0_phatc' "'(gnl|cdd|30371 : 738.0) no description available & (loc_os06g04270.1 : 466.0) no description available & (q43848|tktc_soltu : 457.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (chl4|518554 : 452.0) no description available & (at2g45290 : 448.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|35743 : 423.0) no description available & (ipr005474 : 245.78882) Transketolase, N-terminal & (reliability: 896.0) & (original description: Transketolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tkl PE=4 SV=1)'" P '1.3.9' 'PS.calvin cycle.seduheptulose bisphosphatase' 'tr|b7frd1|b7frd1_phatc' "'(gnl|cdd|30130 : 255.0) no description available & (chl4|521183 : 240.0) no description available & (at3g55800 : 234.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (p46285|s17p_wheat : 234.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Triticum aestivum (Wheat) & (loc_os04g16680.1 : 234.0) no description available & (gnl|cdd|36671 : 210.0) no description available & (ipr000146 : 153.2085) Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase & (reliability: 468.0) & (original description: Seduheptulose bisphosphatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SBPase PE=3 SV=1)'" P '10.1' 'cell wall.precursor synthesis' 'tr|b7gbi0|b7gbi0_phatc' "'(gnl|cdd|37748 : 465.0) no description available & (at5g18070 : 340.0) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).; DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink). & (q6zdq1|agm1_orysa : 340.0) Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) - Oryza sativa (Rice) & (loc_os07g09720.1 : 340.0) no description available & (chl4|525640 : 285.0) no description available & (gnl|cdd|31306 : 117.0) no description available & (ipr016055 : 40.804676) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III & (reliability: 680.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51225 PE=4 SV=1)'" P '10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'tr|b7gcg1|b7gcg1_phatc' "'(loc_os06g48760.1 : 419.0) no description available & (at5g52560 : 417.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 147.0) no description available & (chl4|515420 : 130.0) no description available & (gnl|cdd|34006 : 84.2) no description available & (reliability: 834.0) & (original description: Precursor of phosphorylase udp-glucose diphosphorylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23639 PE=4 SV=1)'" P '10.1.1.20' 'cell wall.precursor synthesis.NDP sugar pyrophosphorylase.multiple NDP-Sugars' 'tr|b7fz25|b7fz25_phatc' "'(loc_os06g48760.1 : 476.0) no description available & (at5g52560 : 464.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37599 : 176.0) no description available & (chl4|515420 : 162.0) no description available & (gnl|cdd|34006 : 105.0) no description available & (p19595|ugpa_soltu : 39.7) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) - Solanum tuberosum (Potato) & (ipr002618 : 35.252125) UTP--glucose-1-phosphate uridylyltransferase & (reliability: 928.0) & (original description: Udp-n-acetylglucosamine diphosphorylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54493 PE=4 SV=1)'" P '10.1.10' 'cell wall.precursor synthesis.RHM' 'tr|b7gav2|b7gav2_phatc' "'(at1g63000 : 358.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (loc_os02g45540.1 : 357.0) no description available & (chl4|519442 : 338.0) no description available & (gnl|cdd|86615 : 73.7) no description available & (ipr016040 : 51.860844) NAD(P)-binding domain & (gnl|cdd|36643 : 43.4) no description available & (reliability: 682.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23281 PE=4 SV=1)'" P '10.1.10' 'cell wall.precursor synthesis.RHM' 'tr|b7g2n7|b7g2n7_phatc' "'(at1g53500 : 417.0) encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development.; MUCILAGE-MODIFIED 4 (MUM4); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, catalytic activity, UDP-glucose 4,6-dehydratase activity, UDP-L-rhamnose synthase activity; INVOLVED IN: seed coat development, UDP-rhamnose biosynthetic process, mucilage biosynthetic process, metabolic process; LOCATED IN: soluble fraction; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 3 (TAIR:AT3G14790.1); Has 53909 Blast hits to 53717 proteins in 3029 species: Archae - 941; Bacteria - 31079; Metazoa - 1146; Fungi - 539; Plants - 1500; Viruses - 107; Other Eukaryotes - 18597 (source: NCBI BLink). & (loc_os03g17000.4 : 416.0) no description available & (gnl|cdd|35966 : 410.0) no description available & (chl4|518626 : 408.0) no description available & (gnl|cdd|31285 : 368.0) no description available & (ipr016040 : 135.06406) NAD(P)-binding domain & (q8h0b6|arae2_orysa : 93.6) Probable UDP-arabinose 4-epimerase 2 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 2) (UDP-galactose 4-epimerase-like protein 2) (OsUEL-2) - Oryza sativa (Rice) & (reliability: 834.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47152 PE=4 SV=1)'" P '10.1.11' 'cell wall.precursor synthesis.UER' 'tr|b7gav2|b7gav2_phatc' "'(at1g63000 : 358.0) nucleotide-rhamnose synthase/epimerase-reductase (NRS/ER); FUNCTIONS IN: UDP-4-keto-rhamnose-4-keto-reductase activity, dTDP-4-dehydrorhamnose reductase activity, UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity, dTDP-4-dehydrorhamnose 3,5-epimerase activity; INVOLVED IN: dTDP-rhamnose biosynthetic process, UDP-rhamnose biosynthetic process; LOCATED IN: soluble fraction, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913); BEST Arabidopsis thaliana protein match is: rhamnose biosynthesis 1 (TAIR:AT1G78570.1); Has 1363 Blast hits to 1363 proteins in 432 species: Archae - 58; Bacteria - 688; Metazoa - 9; Fungi - 22; Plants - 263; Viruses - 5; Other Eukaryotes - 318 (source: NCBI BLink). & (loc_os02g45540.1 : 357.0) no description available & (chl4|519442 : 338.0) no description available & (gnl|cdd|86615 : 73.7) no description available & (ipr016040 : 51.860844) NAD(P)-binding domain & (gnl|cdd|36643 : 43.4) no description available & (reliability: 716.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23281 PE=4 SV=1)'" P '10.1.20' 'cell wall.precursor synthesis.phosphomannose isomerase' 'tr|b7fti5|b7fti5_phatc' "'(gnl|cdd|37968 : 367.0) no description available & (gnl|cdd|85328 : 293.0) no description available & (at1g67070 : 266.0) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 9 (DIN9); CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate isomerase (InterPro:IPR016305), Cupin, RmlC-type (InterPro:IPR011051), Mannose-6-phosphate isomerase, type I (InterPro:IPR001250), RmlC-like jelly roll fold (InterPro:IPR014710), Phosphomannose isomerase, type I, conserved site (InterPro:IPR018050); BEST Arabidopsis thaliana protein match is: Mannose-6-phosphate isomerase, type I (TAIR:AT3G02570.1); Has 2340 Blast hits to 2321 proteins in 789 species: Archae - 2; Bacteria - 1171; Metazoa - 570; Fungi - 215; Plants - 90; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink). & (loc_os01g03710.1 : 253.0) no description available & (chl4|520002 : 224.0) no description available & (ipr001250 : 206.31636) Mannose-6-phosphate isomerase, type I & (reliability: 532.0) & (original description: Mannose-6-phosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PMI1 PE=3 SV=1)'" P '10.1.21' 'cell wall.precursor synthesis.phosphomannomutase' 'tr|b7g492|b7g492_phatc' "'(gnl|cdd|38399 : 354.0) no description available & (loc_os04g58580.1 : 327.0) no description available & (chl4|515529 : 325.0) no description available & (at2g45790 : 316.0) encodes a phosphomannomutase, involved in ascorbate biosynthesis; phosphomannomutase (PMM); FUNCTIONS IN: protein binding, phosphomannomutase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, response to salt stress, mannose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic phosphomannomutase (InterPro:IPR005002), HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379); Has 1083 Blast hits to 1081 proteins in 282 species: Archae - 1; Bacteria - 92; Metazoa - 201; Fungi - 171; Plants - 223; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). & (gnl|cdd|86298 : 316.0) no description available & (ipr005002 : 220.6427) Eukaryotic phosphomannomutase & (reliability: 1018.12476) & (original description: Phosphomannomutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PMM1 PE=3 SV=1)'" P '10.1.4' 'cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD)' 'tr|b5y5j6|b5y5j6_phatc' "'(gnl|cdd|37877 : 695.0) no description available & (at1g26570 : 608.0) UDP-glucose dehydrogenase 1 (UGD1); FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13586 Blast hits to 13559 proteins in 2171 species: Archae - 313; Bacteria - 7133; Metazoa - 213; Fungi - 101; Plants - 213; Viruses - 14; Other Eukaryotes - 5599 (source: NCBI BLink). & (loc_os12g25700.3 : 608.0) no description available & (chl4|525130 : 606.0) no description available & (q96558|ugdh_soybn : 603.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (gnl|cdd|31208 : 330.0) no description available & (ipr016040 : 199.40862) NAD(P)-binding domain & (reliability: 1216.0) & (original description: UDP-glucose 6-dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UGDH1 PE=3 SV=1)'" P '10.1.5' 'cell wall.precursor synthesis.UXS' 'tr|b7geg7|b7geg7_phatc' "'(gnl|cdd|36642 : 467.0) no description available & (at3g46440 : 404.0) encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.; UDP-XYL synthase 5 (UXS5); FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity; INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3 (TAIR:AT5G59290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os01g62020.1 : 399.0) no description available & (chl4|520843 : 392.0) no description available & (gnl|cdd|30800 : 204.0) no description available & (ipr016040 : 179.19617) NAD(P)-binding domain & (q2r1v8|gme2_orysa : 96.3) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (reliability: 808.0) & (original description: Nad-dependent epimerase/dehydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41531 PE=4 SV=1)'" P '10.1.7' 'cell wall.precursor synthesis.GMD' 'tr|b7fsx7|b7fsx7_phatc' "'(gnl|cdd|31286 : 544.0) no description available & (gnl|cdd|36586 : 529.0) no description available & (at5g66280 : 390.0) GDP-D-mannose 4,6-dehydratase; ""GDP-D-mannose 4,6-dehydratase 1"" (GMD1); FUNCTIONS IN: protein binding, GDP-mannose 4,6-dehydratase activity; INVOLVED IN: cellular metabolic process, GDP-mannose metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: intracellular; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), GDP-mannose 4,6-dehydratase (InterPro:IPR006368); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G51160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os06g04620.1 : 365.0) no description available & (ipr001509 : 144.53223) NAD-dependent epimerase/dehydratase & (q8h930|arae1_orysa : 52.0) Probable UDP-arabinose 4-epimerase 1 (EC 5.1.3.5) (UDP-D-xylose 4-epimerase 1) (UDP-galactose 4-epimerase-like protein 1) (OsUEL-1) - Oryza sativa (Rice) & (chl4|526106 : 50.8) no description available & (reliability: 780.0) & (original description: Gdp-mannose 4,6-dehydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GMD1 PE=3 SV=1)'" P '10.1.8' 'cell wall.precursor synthesis.GER' 'tr|b7g7k4|b7g7k4_phatc' "'(gnl|cdd|36644 : 427.0) no description available & (at1g17890 : 189.0) GER2; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 (TAIR:AT1G73250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q67wr2|fcl1_orysa : 183.0) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) - Oryza sativa (Rice) & (loc_os06g44270.1 : 183.0) no description available & (gnl|cdd|85412 : 181.0) no description available & (ipr016040 : 149.40567) NAD(P)-binding domain & (chl4|518626 : 59.7) no description available & (reliability: 378.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15125 PE=3 SV=1)'" P '10.7' 'cell wall.modification' 'tr|b7g259|b7g259_phatc' "'(gnl|cdd|29540 : 259.0) no description available & (ipr013320 : 159.16605) Concanavalin A-like lectin/glucanase, subgroup & (chl4|519327 : 89.0) no description available & (at5g57560 : 40.4) Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli; Touch 4 (TCH4); CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 2219 Blast hits to 2201 proteins in 305 species: Archae - 0; Bacteria - 284; Metazoa - 0; Fungi - 458; Plants - 1386; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (p31178|gle_chlre : 40.4) Autolysin precursor (EC 3.4.24.38) (Gametolysin) (Gamete lytic enzyme) (GLE) - Chlamydomonas reinhardtii & (loc_os02g17880.1 : 40.4) no description available & (gnl|cdd|37361 : 38.5) no description available & (reliability: 80.8) & (original description: Endo-1,3-beta-glucosidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54681 PE=4 SV=1)'" P '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'tr|b7g7s4|b7g7s4_phatc' "'(ipr000022 : 1500.0) Carboxyl transferase & (gnl|cdd|35589 : 976.0) no description available & (at1g36180 : 694.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g22940.1 : 687.0) no description available & (chl4|525499 : 531.0) no description available & (gnl|cdd|85202 : 475.0) no description available & (q42777|mcca_soybn : 203.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Glycine max (Soybean) & (reliability: 1388.0) & (original description: Acetyl-coa carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACC1 PE=4 SV=1)'" P '11.1.1.1' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme' 'tr|b7geb5|b7geb5_phatc' "'(gnl|cdd|35589 : 1913.0) no description available & (ipr000022 : 1500.0) Carboxyl transferase & (at1g36160 : 1378.0) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.; acetyl-CoA carboxylase 1 (ACC1); CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), Single hybrid motif (InterPro:IPR011053), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, central region (InterPro:IPR013537), Biotin carboxylation domain (InterPro:IPR011764), Biotin-binding site (InterPro:IPR001882), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1). & (loc_os05g22940.1 : 1333.0) no description available & (chl4|525499 : 493.0) no description available & (gnl|cdd|85202 : 425.0) no description available & (q2qmg2|mcca_orysa : 233.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 2756.0) & (original description: Biotin carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACC2 PE=4 SV=1)'" P '11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'tr|b7gcl6|b7gcl6_phatc' "'(gnl|cdd|34383 : 633.0) no description available & (gnl|cdd|35459 : 575.0) no description available & (at5g35360 : 345.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (chl4|525207 : 336.0) no description available & (loc_os12g41250.2 : 325.0) no description available & (q2qmg2|mcca_orysa : 323.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (ipr013816 : 179.50633) ATP-grasp fold, subdomain 2 & (reliability: 690.0) & (original description: Carboxylase propionyl-coa carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51245 PE=4 SV=1)'" P '11.1.1.2.4' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase' 'tr|b7ga98|b7ga98_phatc' "'(gnl|cdd|84404 : 1552.0) no description available & (gnl|cdd|35590 : 1445.0) no description available & (chl4|523008 : 688.0) no description available & (at1g03090 : 325.0) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.; MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 41492 Blast hits to 34824 proteins in 3674 species: Archae - 718; Bacteria - 26555; Metazoa - 1797; Fungi - 1117; Plants - 802; Viruses - 0; Other Eukaryotes - 10503 (source: NCBI BLink). & (loc_os12g41250.2 : 311.0) no description available & (q2qmg2|mcca_orysa : 310.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (ipr013785 : 294.6356) Aldolase-type TIM barrel & (reliability: 636.0) & (original description: Precursor of carboxylase pyruvate carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PYC2 PE=4 SV=1)'" P '11.1.13' 'lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein' 'tr|b7g1k0|b7g1k0_phatc' "'(gnl|cdd|35729 : 67.7) no description available & (gnl|cdd|29261 : 66.3) no description available & (at5g53470 : 55.5) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.; acyl-CoA binding protein 1 (ACBP1); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os04g36740.1 : 55.1) no description available & (chl4|520929 : 55.1) no description available & (ipr020683 : 51.05735) Ankyrin repeat-containing domain & (q8vyx2|akt1_orysa : 42.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 111.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8058 PE=4 SV=1)'" P '11.1.15' 'lipid metabolism.FA synthesis and FA elongation.ACP desaturase' 'tr|b7fqk1|b7fqk1_phatc' "'(gnl|cdd|67043 : 390.0) no description available & (q42770|stad_goshi : 369.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Gossypium hirsutum (Upland cotton) & (at3g02610 : 357.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Fatty acid desaturase, type 2 (InterPro:IPR005067), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02620.1); Has 952 Blast hits to 943 proteins in 217 species: Archae - 0; Bacteria - 445; Metazoa - 2; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (loc_os01g69080.1 : 357.0) no description available & (chl4|517119 : 333.0) no description available & (ipr012348 : 292.5009) Ribonucleotide reductase-related & (reliability: 714.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9316 PE=4 SV=1)'" P '11.1.2' 'lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Transacylase' 'tr|b7g3d4|b7g3d4_phatc' "'(loc_os03g18590.1 : 357.0) no description available & (at2g30200 : 334.0) catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding; FUNCTIONS IN: binding, transferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Acyl transferase domain (InterPro:IPR001227), Acyl transferase (InterPro:IPR014043), Malonyl-CoA ACP transacylase, ACP-binding (InterPro:IPR016036); Has 15695 Blast hits to 14359 proteins in 2779 species: Archae - 4; Bacteria - 11793; Metazoa - 195; Fungi - 1104; Plants - 63; Viruses - 0; Other Eukaryotes - 2536 (source: NCBI BLink). & (gnl|cdd|38137 : 317.0) no description available & (chl4|515418 : 292.0) no description available & (gnl|cdd|30679 : 271.0) no description available & (ipr001227 : 138.78998) Acyl transferase domain & (reliability: 668.0) & (original description: Malonyl-CoA:ACP transacylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABD PE=4 SV=1)'" P '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'tr|b7gcm0|b7gcm0_phatc' "'(gnl|cdd|82435 : 511.0) no description available & (gnl|cdd|36608 : 305.0) no description available & (at2g04540 : 205.0) Beta-ketoacyl synthase; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, fatty acid biosynthetic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Thiolase-like (InterPro:IPR016039), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Thiolase-like, subgroup (InterPro:IPR016038), Beta-ketoacyl synthase, active site (InterPro:IPR018201); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-acyl carrier protein synthase I (TAIR:AT5G46290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|524671 : 188.0) no description available & (loc_os02g10320.1 : 177.0) no description available & (p23902|kasc1_horvu : 161.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (ipr016038 : 112.92098) Thiolase-like, subgroup & (reliability: 410.0) & (original description: 3-oxoacyl-[acyl-carrier-protein] synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABB PE=3 SV=1)'" P '11.1.3' 'lipid metabolism.FA synthesis and FA elongation.ketoacyl ACP synthase' 'tr|b7g2w2|b7g2w2_phatc' "'(gnl|cdd|82192 : 513.0) no description available & (gnl|cdd|36608 : 417.0) no description available & (chl4|520094 : 289.0) no description available & (loc_os07g42420.1 : 284.0) no description available & (at5g46290 : 277.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 275.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (ipr016038 : 152.81459) Thiolase-like, subgroup & (reliability: 554.0) & (original description: 3-oxoacyl-[acyl-carrier-protein] synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABFa PE=3 SV=1)'" P '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'tr|b7gda9|b7gda9_phatc' "'(gnl|cdd|84002 : 331.0) no description available & (gnl|cdd|35777 : 330.0) no description available & (loc_os12g08170.1 : 324.0) no description available & (at1g34430 : 320.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (chl4|520617 : 289.0) no description available & (ipr023213 : 135.51605) Chloramphenicol acetyltransferase-like domain & (reliability: 618.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DHLTA_3 PE=3 SV=1)'" P '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'tr|b7fze1|b7fze1_phatc' "'(gnl|cdd|48163 : 262.0) no description available & (gnl|cdd|35446 : 237.0) no description available & (at1g01090 : 204.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (loc_os03g44300.1 : 199.0) no description available & (chl4|521374 : 193.0) no description available & (q9mur4|odpb_mesvi : 188.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (ipr001017 : 117.026375) Dehydrogenase, E1 component & (reliability: 394.0) & (original description: Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDH1 PE=4 SV=1)'" P '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'tr|b7g9g3|b7g9g3_phatc' "'(loc_os05g06460.1 : 536.0) no description available & (at3g16950 : 526.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|81943 : 501.0) no description available & (chl4|510944 : 422.0) no description available & (gnl|cdd|36549 : 420.0) no description available & (p31023|dldh_pea : 206.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (ipr004099 : 95.04087) Pyridine nucleotide-disulphide oxidoreductase, dimerisation & (reliability: 1052.0) & (original description: Lipoamide dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=pDLDH1 PE=3 SV=1)'" P '11.1.31' 'lipid metabolism.FA synthesis and FA elongation.pyruvate DH' 'tr|b7s3l5|b7s3l5_phatc' "'(gnl|cdd|35777 : 330.0) no description available & (gnl|cdd|84002 : 329.0) no description available & (loc_os12g08170.1 : 324.0) no description available & (at1g34430 : 319.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (chl4|520617 : 288.0) no description available & (ipr001078 : 135.51605) 2-oxoacid dehydrogenase acyltransferase, catalytic domain & (reliability: 618.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1828 PE=3 SV=1)'" P '11.1.4' 'lipid metabolism.FA synthesis and FA elongation.ACP oxoacyl reductase' 'tr|b7g1r8|b7g1r8_phatc' "'(gnl|cdd|81632 : 300.0) no description available & (q93x68|fabg5_brana : 270.0) 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 5) (Fragment) - Brassica napus (Rape) & (at1g24360 : 261.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink). & (loc_os02g30060.1 : 258.0) no description available & (chl4|520899 : 257.0) no description available & (gnl|cdd|36414 : 242.0) no description available & (ipr016040 : 198.86629) NAD(P)-binding domain & (reliability: 522.0) & (original description: 3-oxoacyl-[acyl-carrier protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABG PE=4 SV=1)'" P '11.1.6' 'lipid metabolism.FA synthesis and FA elongation.enoyl ACP reductase' 'tr|b7fs72|b7fs72_phatc' "'(gnl|cdd|75497 : 392.0) no description available & (p80030|fabi_brana : 335.0) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) - Brassica napus (Rape) & (at2g05990 : 333.0) Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.; MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink). & (loc_os09g10600.1 : 322.0) no description available & (chl4|523787 : 322.0) no description available & (ipr016040 : 160.04956) NAD(P)-binding domain & (gnl|cdd|35944 : 96.3) no description available & (reliability: 666.0) & (original description: Enoyl-acp reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABI PE=4 SV=1)'" P '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'tr|b7g9f0|b7g9f0_phatc' "'(gnl|cdd|74129 : 742.0) no description available & (gnl|cdd|36390 : 665.0) no description available & (loc_os02g32490.1 : 641.0) no description available & (at5g36880 : 634.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (chl4|520104 : 600.0) no description available & (ipr000873 : 218.40912) AMP-dependent synthetase/ligase & (o24145|4cl1_tobac : 87.4) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 1268.0) & (original description: Acetyl-coenzyme A synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22974 PE=3 SV=1)'" P '11.1.8' 'lipid metabolism.FA synthesis and FA elongation.acyl coa ligase' 'tr|b7g440|b7g440_phatc' "'(gnl|cdd|79058 : 75.8) no description available & (gnl|cdd|36392 : 65.4) no description available & (chl4|520158 : 40.4) no description available & (loc_os04g58710.1 : 38.9) no description available & (at5g36880 : 36.6) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 73.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47565 PE=4 SV=1)'" P '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'tr|b7fyk0|b7fyk0_phatc' "'(gnl|cdd|36395 : 526.0) no description available & (gnl|cdd|31225 : 366.0) no description available & (loc_os05g25310.2 : 328.0) no description available & (at2g04350 : 326.0) long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity, catalytic activity; INVOLVED IN: fatty acid biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long chain acyl-CoA synthetase 9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487 proteins in 3592 species: Archae - 1085; Bacteria - 46156; Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2; Other Eukaryotes - 12622 (source: NCBI BLink). & (chl4|514257 : 269.0) no description available & (ipr000873 : 193.32184) AMP-dependent synthetase/ligase & (q42982|4cl2_orysa : 103.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 652.0) & (original description: Long chain acyl-coa synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACS1 PE=4 SV=1)'" P '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'tr|b5y4d9|b5y4d9_phatc' "'(gnl|cdd|31225 : 432.0) no description available & (gnl|cdd|36470 : 404.0) no description available & (at5g27600 : 224.0) Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.; long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os12g04990.1 : 224.0) no description available & (ipr000873 : 214.27968) AMP-dependent synthetase/ligase & (chl4|513002 : 199.0) no description available & (o24145|4cl1_tobac : 103.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Nicotiana tabacum (Common tobacco) & (reliability: 448.0) & (original description: Long chain acyl-CoA synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACS3 PE=4 SV=1)'" P '11.1.9' 'lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase' 'tr|b7fxx6|b7fxx6_phatc' "'(gnl|cdd|36470 : 457.0) no description available & (gnl|cdd|31225 : 390.0) no description available & (ipr000873 : 163.66988) AMP-dependent synthetase/ligase & (loc_os11g35400.1 : 157.0) no description available & (at3g05970 : 152.0) encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes; long-chain acyl-CoA synthetase 6 (LACS6); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: long-chain fatty acid metabolic process; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 7 (TAIR:AT5G27600.1); Has 54528 Blast hits to 52136 proteins in 3333 species: Archae - 925; Bacteria - 35165; Metazoa - 2570; Fungi - 2253; Plants - 2087; Viruses - 1; Other Eukaryotes - 11527 (source: NCBI BLink). & (chl4|513002 : 151.0) no description available & (p17814|4cl1_orysa : 72.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Oryza sativa (Rice) & (reliability: 304.0) & (original description: Long chain acyl-coa synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACS4 PE=4 SV=1)'" P '11.10.3' 'lipid metabolism.glycolipid synthesis.UDP-sulfoquinovose synthase' 'tr|b5y493|b5y493_phatc' "'(q84ki6|sqd1_spiol : 327.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (loc_os05g32140.1 : 324.0) no description available & (chl4|516156 : 312.0) no description available & (at4g33030 : 309.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (gnl|cdd|36585 : 129.0) no description available & (gnl|cdd|30800 : 118.0) no description available & (ipr016040 : 114.94693) NAD(P)-binding domain & (reliability: 618.0) & (original description: UDP-sulfoquinovose synthase, plastid OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SQD1 PE=4 SV=1)'" P '11.3' 'lipid metabolism.Phospholipid synthesis' 'tr|b7g968|b7g968_phatc' "'(chl4|518118 : 311.0) no description available & (gnl|cdd|84012 : 173.0) no description available & (gnl|cdd|36484 : 55.4) no description available & (at1g23360 : 50.1) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fr44|peam1_arath : 47.4) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (loc_os05g47540.2 : 43.1) no description available & (reliability: 94.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39627 PE=4 SV=1)'" P '11.3.1' 'lipid metabolism.Phospholipid synthesis.1-acylglycerol-3-phosphate O-acyltransferase' 'tr|b7gcp3|b7gcp3_phatc' "'(q39639|plsb_cucsa : 194.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Cucumis sativus (Cucumber) & (at1g32200 : 189.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (chl4|519900 : 189.0) no description available & (loc_os10g42720.1 : 184.0) no description available & (gnl|cdd|65360 : 69.5) no description available & (reliability: 378.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50031 PE=4 SV=1)'" P '11.3.10' 'lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase' 'tr|b7g7j1|b7g7j1_phatc' '(chl4|526058 : 302.0) no description available & (at4g33110 : 296.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: (S)-coclaurine-N-methyltransferase activity; INVOLVED IN: lipid biosynthetic process; CONTAINS InterPro DOMAIN/s: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G33120.1). & (loc_os06g37610.1 : 287.0) no description available & (gnl|cdd|32411 : 188.0) no description available & (ipr003333 : 68.98225) Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase & (gnl|cdd|36484 : 49.2) no description available & (q9m571|peamt_spiol : 38.9) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (reliability: 592.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48517 PE=4 SV=1)' P '11.3.7' 'lipid metabolism.Phospholipid synthesis.cyclopropane-fatty-acyl-phospholipid synthase' 'tr|b7g7i7|b7g7i7_phatc' "'(at3g23510 : 605.0) Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink). & (chl4|523500 : 500.0) no description available & (loc_os12g16650.1 : 498.0) no description available & (gnl|cdd|32731 : 324.0) no description available & (ipr003333 : 151.38283) Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase & (gnl|cdd|35252 : 62.3) no description available & (q9m571|peamt_spiol : 55.8) Phosphoethanolamine N-methyltransferase (EC 2.1.1.103) - Spinacia oleracea (Spinach) & (reliability: 1210.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29633 PE=4 SV=1)'" P '11.8.1' "'lipid metabolism.'exotics' (steroids, squalene etc).sphingolipids'" 'tr|b5y5c8|b5y5c8_phatc' "'(chl4|516561 : 117.0) no description available & (gnl|cdd|31231 : 103.0) no description available & (gnl|cdd|36824 : 91.1) no description available & (ipr016040 : 81.79445) NAD(P)-binding domain & (at5g19200 : 58.9) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G06060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g30060.1 : 53.1) no description available & (q93x68|fabg5_brana : 48.1) 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 5) (Fragment) - Brassica napus (Rape) & (reliability: 117.8) & (original description: Short-chain alcohol dehydrogenase with NAD or NADP as acceptor OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_33463 PE=4 SV=1)'" P '11.8.4' "'lipid metabolism.'exotics' (steroids, squalene etc).3-beta hydroxysteroid dehydrogenase/isomerase'" 'tr|b7g8m9|b7g8m9_phatc' "'(gnl|cdd|36643 : 204.0) no description available & (loc_os03g29170.2 : 155.0) no description available & (at1g47290 : 136.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 (3BETAHSD/D1); FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity; INVOLVED IN: steroid biosynthetic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225); BEST Arabidopsis thaliana protein match is: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 (TAIR:AT2G26260.1); Has 24445 Blast hits to 24432 proteins in 2873 species: Archae - 619; Bacteria - 15430; Metazoa - 691; Fungi - 529; Plants - 1560; Viruses - 132; Other Eukaryotes - 5484 (source: NCBI BLink). & (gnl|cdd|85225 : 134.0) no description available & (chl4|513238 : 119.0) no description available & (ipr016040 : 85.55232) NAD(P)-binding domain & (p51104|dfra_diaca : 46.2) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 272.0) & (original description: Reductase with NAD or NADP as acceptor OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48864 PE=3 SV=1)'" P '11.8.8' "'lipid metabolism.'exotics' (steroids, squalene etc).squalene synthase'" 'tr|b7g0x7|b7g0x7_phatc' "'(gnl|cdd|36672 : 288.0) no description available & (chl4|520971 : 267.0) no description available & (at4g34640 : 262.0) Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.; squalene synthase 1 (SQS1); FUNCTIONS IN: farnesyl-diphosphate farnesyltransferase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Squalene/phytoene synthase, conserved site (InterPro:IPR019845), Terpenoid synthase (InterPro:IPR008949), Farnesyl-diphosphate farnesyltransferase (InterPro:IPR006449), Squalene/phytoene synthase (InterPro:IPR002060); BEST Arabidopsis thaliana protein match is: squalene synthase 2 (TAIR:AT4G34650.1); Has 1469 Blast hits to 1468 proteins in 521 species: Archae - 28; Bacteria - 581; Metazoa - 114; Fungi - 174; Plants - 415; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (loc_os03g59040.2 : 257.0) no description available & (gnl|cdd|64362 : 199.0) no description available & (ipr008949 : 174.99646) Terpenoid synthase & (p37272|psy_capan : 35.8) Phytoene synthase, chloroplast precursor (EC 2.5.1.-) - Capsicum annuum (Bell pepper) & (reliability: 524.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13160 PE=4 SV=1)'" P '11.9.2' 'lipid metabolism.lipid degradation.lipases' 'tr|b7fry8|b7fry8_phatc' '(gnl|cdd|36668 : 121.0) no description available & (gnl|cdd|32448 : 108.0) no description available & (at1g18360 : 82.8) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73480.1); Has 6456 Blast hits to 6448 proteins in 1759 species: Archae - 38; Bacteria - 4736; Metazoa - 147; Fungi - 149; Plants - 444; Viruses - 63; Other Eukaryotes - 879 (source: NCBI BLink). & (loc_os01g62010.1 : 71.6) no description available & (chl4|511191 : 48.5) no description available & (reliability: 151.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43352 PE=4 SV=1)' P '11.9.3.2' 'lipid metabolism.lipid degradation.lysophospholipases.carboxylesterase' 'tr|b7g4g0|b7g4g0_phatc' "'(gnl|cdd|65966 : 168.0) no description available & (gnl|cdd|37323 : 151.0) no description available & (chl4|520735 : 135.0) no description available & (ipr003140 : 116.6899) Phospholipase/carboxylesterase/thioesterase & (at5g20060 : 116.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 2121 Blast hits to 2107 proteins in 636 species: Archae - 4; Bacteria - 835; Metazoa - 351; Fungi - 284; Plants - 201; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (loc_os01g07960.3 : 100.0) no description available & (reliability: 232.0) & (original description: Lysophospholipase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_52268 PE=4 SV=1)'" P '11.9.3.3' 'lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase' 'tr|b7fq33|b7fq33_phatc' "'(ipr017946 : 254.45554) PLC-like phosphodiesterase, TIM beta/alpha-barrel domain & (gnl|cdd|30929 : 71.0) no description available & (chl4|516746 : 67.0) no description available & (loc_os07g41150.1 : 58.9) no description available & (at5g08030 : 54.7) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT1G74210.1); Has 6803 Blast hits to 6670 proteins in 1728 species: Archae - 62; Bacteria - 5228; Metazoa - 196; Fungi - 127; Plants - 339; Viruses - 7; Other Eukaryotes - 844 (source: NCBI BLink). & (gnl|cdd|37469 : 53.5) no description available & (reliability: 109.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32057 PE=4 SV=1)'" P '11.9.4.2' 'lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH' 'tr|b7ftr6|b7ftr6_phatc' "'(gnl|cdd|83019 : 684.0) no description available & (gnl|cdd|35359 : 112.0) no description available & (ipr015396 : 80.93297) Acyl-CoA dehydrogenase, C-termina, bacterial type & (q9fs88|ivd1_soltu : 69.3) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (loc_os05g03480.3 : 65.9) no description available & (at3g51840 : 45.4) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (chl4|516987 : 42.0) no description available & (reliability: 90.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11014 PE=4 SV=1)'" P '11.9.4.3' 'lipid metabolism.lipid degradation.beta-oxidation.enoyl CoA hydratase' 'tr|b7ge26|b7ge26_phatc' "'(gnl|cdd|75276 : 328.0) no description available & (gnl|cdd|36893 : 269.0) no description available & (loc_os02g43720.1 : 162.0) no description available & (at4g16800 : 158.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (chl4|518804 : 145.0) no description available & (ipr001753 : 122.10958) Crotonase, core & (q39659|mfpa_cucsa : 112.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 316.0) & (original description: Hydratase enyol-coa hydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55192 PE=3 SV=1)'" P '11.9.4.9' 'lipid metabolism.lipid degradation.beta-oxidation.multifunctional' 'tr|b7fxy5|b7fxy5_phatc' "'(gnl|cdd|83754 : 714.0) no description available & (gnl|cdd|36896 : 321.0) no description available & (loc_os05g06300.1 : 277.0) no description available & (q39659|mfpa_cucsa : 273.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (at3g06860 : 240.0) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.; multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink). & (chl4|516986 : 238.0) no description available & (ipr016040 : 134.62874) NAD(P)-binding domain & (reliability: 480.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35240 PE=3 SV=1)'" P '12.1.1' 'N-metabolism.nitrate metabolism.NR' 'tr|b7gcp2|b7gcp2_phatc' "'(gnl|cdd|35754 : 230.0) no description available & (p23312|nia_spiol : 199.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Spinacia oleracea (Spinach) & (at1g37130 : 192.0) Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940.; nitrate reductase 2 (NIA2); FUNCTIONS IN: nitrate reductase activity, nitrate reductase (NADH) activity; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus, response to symbiotic fungus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitrate reductase NADH dependent (InterPro:IPR012137), Cytochrome b5, heme-binding site (InterPro:IPR018506), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 14440 Blast hits to 14066 proteins in 2196 species: Archae - 142; Bacteria - 6584; Metazoa - 1752; Fungi - 2225; Plants - 1476; Viruses - 3; Other Eukaryotes - 2258 (source: NCBI BLink). & (loc_os08g36500.1 : 187.0) no description available & (chl4|526315 : 172.0) no description available & (gnl|cdd|85158 : 108.0) no description available & (ipr008333 : 51.042534) Oxidoreductase, FAD-binding domain & (reliability: 384.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16490 PE=4 SV=1)'" P '12.1.1' 'N-metabolism.nitrate metabolism.NR' 'tr|b7g997|b7g997_phatc' "'(p39866|nia2_phavu : 776.0) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2) - Phaseolus vulgaris (Kidney bean) (French bean) & (loc_os08g36480.1 : 769.0) no description available & (at1g77760 : 763.0) Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.; nitrate reductase 1 (NIA1); FUNCTIONS IN: nitrate reductase activity, protein binding; INVOLVED IN: nitric oxide biosynthetic process, nitrate assimilation, response to light stimulus; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Nitrate reductase NADH dependent (InterPro:IPR012137), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Immunoglobulin E-set (InterPro:IPR014756), Cytochrome b5 (InterPro:IPR001199), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Oxidoreductase, molybdopterin binding site (InterPro:IPR022407), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066); BEST Arabidopsis thaliana protein match is: nitrate reductase 2 (TAIR:AT1G37130.1); Has 14813 Blast hits to 14437 proteins in 2198 species: Archae - 168; Bacteria - 6976; Metazoa - 1728; Fungi - 2215; Plants - 1479; Viruses - 3; Other Eukaryotes - 2244 (source: NCBI BLink). & (chl4|526315 : 721.0) no description available & (gnl|cdd|29407 : 536.0) no description available & (gnl|cdd|35755 : 402.0) no description available & (ipr000572 : 175.13573) Oxidoreductase, molybdopterin-binding domain & (reliability: 1526.0) & (original description: Nitrate reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54983 PE=3 SV=1)'" P '12.1.2' 'N-metabolism.nitrate metabolism.nitrite reductase' 'tr|b7g0l4|b7g0l4_phatc' "'(gnl|cdd|83089 : 522.0) no description available & (chl4|526311 : 440.0) no description available & (p05314|nir_spiol : 434.0) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (loc_os01g25484.2 : 429.0) no description available & (at2g15620 : 428.0) Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.; nitrite reductase 1 (NIR1); FUNCTIONS IN: ferredoxin-nitrate reductase activity, nitrite reductase (NO-forming) activity; INVOLVED IN: response to salt stress, response to nitrate; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: sulfite reductase (TAIR:AT5G04590.1); Has 5959 Blast hits to 5874 proteins in 1733 species: Archae - 294; Bacteria - 4692; Metazoa - 2; Fungi - 157; Plants - 240; Viruses - 0; Other Eukaryotes - 574 (source: NCBI BLink). & (gnl|cdd|35780 : 284.0) no description available & (ipr006067 : 64.00238) Nitrite/sulphite reductase 4Fe-4S domain & (reliability: 856.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27757 PE=4 SV=1)'" P '12.2.1.1' 'N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent' 'tr|b7fpu3|b7fpu3_phatc' "'(gnl|cdd|35620 : 1645.0) no description available & (gnl|cdd|83964 : 1557.0) no description available & (loc_os07g46460.1 : 1553.0) no description available & (p23225|gltb_maize : 1544.0) Ferredoxin-dependent glutamate synthase, chloroplast precursor (EC 1.4.7.1) (Fd-GOGAT) - Zea mays (Maize) & (at5g04140 : 1536.0) Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.; glutamate synthase 1 (GLU1); FUNCTIONS IN: protein binding, glutamate synthase (ferredoxin) activity; INVOLVED IN: response to light stimulus, photorespiration; LOCATED IN: apoplast, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 2 (TAIR:AT2G41220.1); Has 17415 Blast hits to 17302 proteins in 2024 species: Archae - 267; Bacteria - 5686; Metazoa - 111; Fungi - 160; Plants - 179; Viruses - 0; Other Eukaryotes - 11012 (source: NCBI BLink). & (chl4|513147 : 1519.0) no description available & (ipr013785 : 1500.0) Aldolase-type TIM barrel & (reliability: 3072.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56605 PE=4 SV=1)'" P '12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'tr|b7fzb0|b7fzb0_phatc' "'(gnl|cdd|35620 : 684.0) no description available & (gnl|cdd|84303 : 678.0) no description available & (chl4|514792 : 562.0) no description available & (loc_os05g48200.1 : 552.0) no description available & (q03460|glsn_medsa : 541.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (at5g53460 : 532.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (ipr012285 : 90.972) Fumarate reductase, C-terminal & (reliability: 1064.0) & (original description: Synthase of glutamate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GltD PE=4 SV=1)'" P '12.2.1.2' 'N-metabolism.ammonia metabolism.glutamate synthase.NADH dependent' 'tr|b7gaz5|b7gaz5_phatc' "'(gnl|cdd|35620 : 1927.0) no description available & (loc_os01g48960.1 : 1556.0) no description available & (at5g53460 : 1550.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (gnl|cdd|83964 : 1549.0) no description available & (q03460|glsn_medsa : 1538.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (ipr013785 : 1500.0) Aldolase-type TIM barrel & (chl4|514792 : 1475.0) no description available & (reliability: 3100.0) & (original description: Ferredoxin-dependent glutamate synthase, fusion of large and small subunits OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GltX PE=4 SV=1)'" P '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'tr|b7g6q6|b7g6q6_phatc' "'(gnl|cdd|33749 : 536.0) no description available & (ipr014746 : 140.73213) Glutamine synthetase/guanido kinase, catalytic domain & (chl4|511904 : 44.3) no description available & (loc_os10g31820.2 : 42.0) no description available & (gnl|cdd|35902 : 41.1) no description available & (p52782|glna_luplu : 40.4) Glutamine synthetase nodule isozyme (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS) - Lupinus luteus (European yellow lupin) & (at5g35630 : 37.7) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (reliability: 75.4) & (original description: GLNA, glutamine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GLNA PE=3 SV=1)'" P '12.2.2' 'N-metabolism.ammonia metabolism.glutamine synthetase' 'tr|b7g5a1|b7g5a1_phatc' "'(gnl|cdd|35902 : 454.0) no description available & (q42624|glnac_brana : 439.0) Glutamine synthetase, chloroplast precursor (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS2) - Brassica napus (Rape) & (at5g35630 : 438.0) chloroplastic glutamine synthetase; glutamine synthetase 2 (GS2); FUNCTIONS IN: glutamate-ammonia ligase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone F11 (TAIR:AT1G66200.1); Has 8236 Blast hits to 8234 proteins in 2572 species: Archae - 144; Bacteria - 3324; Metazoa - 415; Fungi - 259; Plants - 1746; Viruses - 3; Other Eukaryotes - 2345 (source: NCBI BLink). & (loc_os04g56400.2 : 434.0) no description available & (chl4|519266 : 369.0) no description available & (gnl|cdd|30523 : 220.0) no description available & (ipr008146 : 133.45462) Glutamine synthetase, catalytic domain & (reliability: 876.0) & (original description: Glutamine synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51092 PE=3 SV=1)'" P '12.3.1' 'N-metabolism.N-degradation.glutamate dehydrogenase' 'tr|b7fwy4|b7fwy4_phatc' "'(gnl|cdd|32727 : 242.0) no description available & (gnl|cdd|37461 : 150.0) no description available & (ipr016040 : 96.759865) NAD(P)-binding domain & (o04937|dhea_nicpl : 58.5) Glutamate dehydrogenase A (EC 1.4.1.3) (GDH A) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at5g07440 : 49.7) Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 2 (GDH2); FUNCTIONS IN: in 7 functions; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g43470.1 : 45.4) no description available & (chl4|522388 : 39.7) no description available & (reliability: 99.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45239 PE=4 SV=1)'" P '13.1.1.1.2' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase' 'tr|b7fpr0|b7fpr0_phatc' "'(gnl|cdd|81830 : 323.0) no description available & (gnl|cdd|36618 : 225.0) no description available & (at3g22200 : 169.0) Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.; POLLEN-PISTIL INCOMPATIBILITY 2 (POP2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1). & (loc_os02g02210.1 : 169.0) no description available & (ipr015421 : 156.10579) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (chl4|521125 : 122.0) no description available & (q39566|gsa_chlre : 86.3) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (reliability: 338.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41686 PE=3 SV=1)'" P '13.1.1.1.4' 'amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH' 'tr|b7fpf9|b7fpf9_phatc' "'(loc_os02g35500.1 : 211.0) no description available & (at1g17650 : 208.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|32267 : 205.0) no description available & (chl4|518111 : 202.0) no description available & (gnl|cdd|35630 : 198.0) no description available & (ipr016040 : 83.73703) NAD(P)-binding domain & (reliability: 416.0) & (original description: Oxidoreductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17487 PE=4 SV=1)'" P '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'tr|b7g9y7|b7g9y7_phatc' "'(gnl|cdd|36625 : 516.0) no description available & (gnl|cdd|31637 : 493.0) no description available & (at2g30970 : 388.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p28734|aatc_dauca : 388.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (chl4|522990 : 385.0) no description available & (loc_os01g55540.1 : 382.0) no description available & (ipr015421 : 242.52646) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 776.0) & (original description: Aspartate transaminase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AAT_1 PE=4 SV=1)'" P '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'tr|b7gde4|b7gde4_phatc' "'(gnl|cdd|36625 : 516.0) no description available & (gnl|cdd|82888 : 484.0) no description available & (at2g30970 : 434.0) ASPARTATE AMINOTRANSFERASE 1; aspartate aminotransferase 1 (ASP1); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g14110.1 : 430.0) no description available & (p37833|aatc_orysa : 425.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (chl4|522990 : 421.0) no description available & (ipr015421 : 242.1425) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 868.0) & (original description: Aspartate aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AAT_2 PE=4 SV=1)'" P '13.1.1.2.1' 'amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase' 'tr|b7s3w8|b7s3w8_phatc' "'(gnl|cdd|30785 : 353.0) no description available & (loc_os01g65090.1 : 328.0) no description available & (at2g22250 : 317.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35478 : 242.0) no description available & (ipr015421 : 160.1877) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (chl4|511312 : 108.0) no description available & (p37821|1a1c_maldo : 85.9) 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 634.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd870 PE=4 SV=1)'" P '13.1.1.3.1' 'amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase' 'tr|b7fuh0|b7fuh0_phatc' "'(gnl|cdd|35479 : 549.0) no description available & (at1g72330 : 467.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 462.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (loc_os07g42600.1 : 457.0) no description available & (chl4|523569 : 457.0) no description available & (gnl|cdd|30785 : 210.0) no description available & (ipr015421 : 126.98467) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 934.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34010 PE=4 SV=1)'" P '13.1.2.2.1' 'amino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase' 'tr|b7gbh2|b7gbh2_phatc' "'(o04226|p5cs_orysa : 544.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (loc_os05g38150.2 : 544.0) no description available & (at2g39800 : 518.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (gnl|cdd|39367 : 502.0) no description available & (gnl|cdd|30364 : 413.0) no description available & (chl4|511898 : 369.0) no description available & (ipr016162 : 208.2543) Aldehyde dehydrogenase, N-terminal & (reliability: 1036.0) & (original description: Delta-1-pyrroline-5-carboxylate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=P5CS PE=3 SV=1)'" P '13.1.2.3.21' 'amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase' 'tr|b7gbf1|b7gbf1_phatc' "'(gnl|cdd|36717 : 385.0) no description available & (gnl|cdd|30427 : 379.0) no description available & (q43814|otc_pea : 269.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (loc_os02g47590.1 : 258.0) no description available & (at1g75330 : 251.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (chl4|512627 : 244.0) no description available & (ipr006131 : 102.58671) Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain & (reliability: 502.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30514 PE=3 SV=1)'" P '13.1.2.3.22' 'amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase' 'tr|b5y3v3|b5y3v3_phatc' "'(ipr001518 : 1500.0) Argininosuccinate synthase & (gnl|cdd|30186 : 530.0) no description available & (gnl|cdd|36918 : 521.0) no description available & (chl4|526420 : 395.0) no description available & (at4g24830 : 372.0) arginosuccinate synthase family; FUNCTIONS IN: argininosuccinate synthase activity, ATP binding; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Argininosuccinate synthase, conserved site (InterPro:IPR018223), Argininosuccinate synthase (InterPro:IPR001518); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os12g13320.1 : 354.0) no description available & (reliability: 3369.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21116 PE=3 SV=1)'" P '13.1.2.3.22' 'amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase' 'tr|b7g0p4|b7g0p4_phatc' "'(gnl|cdd|73147 : 279.0) no description available & (gnl|cdd|37997 : 183.0) no description available & (ipr002813 : 182.59737) Arginine biosynthesis protein ArgJ & (at2g37500 : 138.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os03g17120.1 : 121.0) no description available & (chl4|516980 : 111.0) no description available & (reliability: 319.54538) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12762 PE=3 SV=1)'" P '13.1.2.3.23' 'amino acid metabolism.synthesis.glutamate family.arginine.argininosuccinate lyase' 'tr|b7fv31|b7fv31_phatc' "'(gnl|cdd|36530 : 581.0) no description available & (gnl|cdd|28774 : 559.0) no description available & (p22675|arly_chlre : 481.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (loc_os03g19280.1 : 320.0) no description available & (at5g10920 : 308.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|511047 : 225.0) no description available & (ipr022761 : 184.89995) Lyase 1, N-terminal & (reliability: 616.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34526 PE=3 SV=1)'" P '13.1.2.3.3' 'amino acid metabolism.synthesis.glutamate family.arginine.N-Acetylglutamate-5-P reductase' 'tr|b5y408|b5y408_phatc' "'(gnl|cdd|84006 : 442.0) no description available & (gnl|cdd|39555 : 135.0) no description available & (at2g19940 : 120.0) oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, copper ion binding; INVOLVED IN: response to cadmium ion, cellular amino acid metabolic process; LOCATED IN: nucleolus, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), N-acetyl-gamma-glutamyl-phosphate reductase (InterPro:IPR000706); Has 8034 Blast hits to 8033 proteins in 2187 species: Archae - 385; Bacteria - 4804; Metazoa - 0; Fungi - 163; Plants - 77; Viruses - 0; Other Eukaryotes - 2605 (source: NCBI BLink). & (chl4|511882 : 108.0) no description available & (q6av34|argc_orysa : 103.0) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) - Oryza sativa (Rice) & (loc_os03g42110.1 : 103.0) no description available & (reliability: 240.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_36913 PE=3 SV=1)'" P '13.1.2.3.4' 'amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase' 'tr|b7gej6|b7gej6_phatc' "'(gnl|cdd|81017 : 561.0) no description available & (chl4|514884 : 281.0) no description available & (gnl|cdd|36615 : 279.0) no description available & (at1g80600 : 276.0) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).; HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink). & (loc_os05g03830.1 : 261.0) no description available & (ipr005814 : 208.94746) Aminotransferase class-III & (p45621|gsa_soybn : 104.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Glycine max (Soybean) & (reliability: 552.0) & (original description: Acetylornithine aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50577 PE=3 SV=1)'" P '13.1.3.1.1' 'amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase' 'tr|b7ft50|b7ft50_phatc' "'(gnl|cdd|82993 : 763.0) no description available & (gnl|cdd|35791 : 689.0) no description available & (at3g47340 : 637.0) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; glutamine-dependent asparagine synthase 1 (ASN1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Asparagine synthase (InterPro:IPR001962), Asparagine synthase, glutamine-hydrolyzing (InterPro:IPR006426), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: asparagine synthetase 3 (TAIR:AT5G10240.1); Has 9911 Blast hits to 9877 proteins in 1912 species: Archae - 315; Bacteria - 5703; Metazoa - 210; Fungi - 275; Plants - 333; Viruses - 5; Other Eukaryotes - 3070 (source: NCBI BLink). & (p31752|asns_aspof : 625.0) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (AS) - Asparagus officinalis (Garden asparagus) & (loc_os06g15420.1 : 622.0) no description available & (chl4|510688 : 620.0) no description available & (ipr014729 : 238.43922) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 1274.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18337 PE=4 SV=1)'" P '13.1.3.2.1' 'amino acid metabolism.synthesis.aspartate family.threonine.threonine synthase' 'tr|b7fyq1|b7fyq1_phatc' "'(gnl|cdd|82868 : 403.0) no description available & (gnl|cdd|37827 : 148.0) no description available & (at4g29840 : 40.0) threonine synthase; METHIONINE OVER-ACCUMULATOR 2 (MTO2); FUNCTIONS IN: threonine synthase activity; INVOLVED IN: threonine biosynthetic process, metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Threonine synthase (InterPro:IPR004450), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT1G72810.1); Has 6824 Blast hits to 6824 proteins in 2025 species: Archae - 409; Bacteria - 4266; Metazoa - 101; Fungi - 24; Plants - 83; Viruses - 0; Other Eukaryotes - 1941 (source: NCBI BLink). & (q9mt28|thrc_soltu : 39.3) Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS) - Solanum tuberosum (Potato) & (chl4|510278 : 36.6) no description available & (ipr001926 : 36.435898) Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily & (loc_os12g34340.1 : 35.0) no description available & (reliability: 80.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35594 PE=4 SV=1)'" P '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'tr|b7gbg7|b7gbg7_phatc' '(gnl|cdd|83043 : 1778.0) no description available & (chl4|522837 : 665.0) no description available & (ipr000489 : 232.22462) Pterin-binding & (gnl|cdd|36792 : 197.0) no description available & (loc_os03g12110.1 : 58.5) no description available & (q9fun0|hmt1_maize : 58.2) Homocysteine S-methyltransferase 1 (EC 2.1.1.10) (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (ZmHMT-1) - Zea mays (Maize) & (at3g25900 : 56.2) HMT-1; CONTAINS InterPro DOMAIN/s: Homocysteine S-methyltransferase (InterPro:IPR003726); BEST Arabidopsis thaliana protein match is: homocysteine S-methyltransferase 3 (TAIR:AT3G22740.1). & (reliability: 383.5056) & (original description: Methionine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=METH PE=4 SV=1)' P '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'tr|b7g1x4|b7g1x4_phatc' "'(ipr002629 : 1500.0) Methionine synthase, vitamin-B12 independent & (gnl|cdd|81472 : 914.0) no description available & (gnl|cdd|37474 : 704.0) no description available & (chl4|521080 : 635.0) no description available & (q39586|mete_chlre : 613.0) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) - Chlamydomonas reinhardtii & (loc_os12g42884.3 : 561.0) no description available & (at3g03780 : 556.0) Encodes a cytosolic methionine synthase, involved in methionine regeneration via the activated methyl cycle (or SAM cycle); methionine synthase 2 (MS2); FUNCTIONS IN: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, methionine synthase activity; INVOLVED IN: response to salt stress, methionine biosynthetic process; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal (InterPro:IPR013215), Methionine synthase, vitamin-B12 independent (InterPro:IPR002629), 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (InterPro:IPR006276); BEST Arabidopsis thaliana protein match is: Cobalamin-independent synthase family protein (TAIR:AT5G17920.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3727.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28056 PE=4 SV=1)'" P '13.1.3.4' 'amino acid metabolism.synthesis.aspartate family.methionine' 'tr|b7s466|b7s466_phatc' "'(gnl|cdd|36719 : 629.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (p93438|metl_orysa : 517.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Oryza sativa (Rice) & (loc_os01g22010.3 : 517.0) no description available & (chl4|522823 : 516.0) no description available & (at3g17390 : 508.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (ipr022630 : 149.78456) S-adenosylmethionine synthetase, C-terminal & (reliability: 1002.0) & (original description: S-adenosylmethionine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd913 PE=3 SV=1)'" P '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'tr|b7gc92|b7gc92_phatc' "'(gnl|cdd|35276 : 237.0) no description available & (gnl|cdd|30971 : 199.0) no description available & (loc_os03g25940.2 : 94.4) no description available & (ipr015421 : 75.89) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (at3g01120 : 74.3) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (chl4|522789 : 73.2) no description available & (reliability: 148.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49903 PE=4 SV=1)'" P '13.1.3.4.1' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine gamma-synthase' 'tr|b7g117|b7g117_phatc' "'(gnl|cdd|32700 : 556.0) no description available & (gnl|cdd|35276 : 327.0) no description available & (ipr000277 : 283.21796) Cys/Met metabolism, pyridoxal phosphate-dependent enzyme & (at3g01120 : 186.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (chl4|516430 : 170.0) no description available & (loc_os10g26010.1 : 167.0) no description available & (reliability: 372.0) & (original description: O-acetylhomoserine OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50964 PE=3 SV=1)'" P '13.1.3.4.11' 'amino acid metabolism.synthesis.aspartate family.methionine.S-adenosylmethionine synthetase' 'tr|b7s466|b7s466_phatc' "'(gnl|cdd|36719 : 629.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (p93438|metl_orysa : 517.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Oryza sativa (Rice) & (loc_os01g22010.3 : 517.0) no description available & (chl4|522823 : 516.0) no description available & (at3g17390 : 508.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (ipr022630 : 149.78456) S-adenosylmethionine synthetase, C-terminal & (reliability: 1012.0) & (original description: S-adenosylmethionine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd913 PE=3 SV=1)'" P '13.1.3.4.12' 'amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase' 'tr|b7fz54|b7fz54_phatc' "'(gnl|cdd|87468 : 72.6) no description available & (gnl|cdd|37572 : 55.7) no description available & (chl4|515475 : 54.3) no description available & (o82427|smt2_orysa : 53.1) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (loc_os03g04340.1 : 53.1) no description available & (at5g13710 : 50.1) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (reliability: 91.6) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12280 PE=4 SV=1)'" P '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'tr|b7gc92|b7gc92_phatc' "'(gnl|cdd|35276 : 237.0) no description available & (gnl|cdd|30971 : 199.0) no description available & (loc_os03g25940.2 : 94.4) no description available & (ipr015421 : 75.89) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (at3g01120 : 74.3) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (chl4|522789 : 73.2) no description available & (reliability: 141.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49903 PE=4 SV=1)'" P '13.1.3.4.2' 'amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase' 'tr|b7g117|b7g117_phatc' "'(gnl|cdd|32700 : 556.0) no description available & (gnl|cdd|35276 : 327.0) no description available & (ipr000277 : 283.21796) Cys/Met metabolism, pyridoxal phosphate-dependent enzyme & (at3g01120 : 186.0) encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.; METHIONINE OVERACCUMULATION 1 (MTO1); FUNCTIONS IN: cystathionine gamma-synthase activity; INVOLVED IN: methionine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Cys/Met metabolism, pyridoxal phosphate-dependent enzyme (InterPro:IPR000277), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G33320.1); Has 21364 Blast hits to 20702 proteins in 2452 species: Archae - 220; Bacteria - 11705; Metazoa - 241; Fungi - 842; Plants - 284; Viruses - 13; Other Eukaryotes - 8059 (source: NCBI BLink). & (chl4|516430 : 170.0) no description available & (loc_os10g26010.1 : 167.0) no description available & (reliability: 338.0) & (original description: O-acetylhomoserine OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50964 PE=3 SV=1)'" P '13.1.3.5.2' 'amino acid metabolism.synthesis.aspartate family.lysine.dihydrodipicolinate reductase' 'tr|b7ft68|b7ft68_phatc' "'(at3g59890 : 227.0) Dihydrodipicolinate reductase, bacterial/plant; FUNCTIONS IN: dihydrodipicolinate reductase activity; INVOLVED IN: oxidation reduction, lysine biosynthetic process via diaminopimelate, diaminopimelate biosynthetic process, metabolic process; LOCATED IN: chloroplast, cytoplasm; CONTAINS InterPro DOMAIN/s: Dihydrodipicolinate reductase, C-terminal (InterPro:IPR022663), NAD(P)-binding domain (InterPro:IPR016040), Dihydrodipicolinate reductase, plant (InterPro:IPR011859), Dihydrodipicolinate reductase, bacterial/plant (InterPro:IPR011770), Dihydrodipicolinate reductase, N-terminal (InterPro:IPR000846); BEST Arabidopsis thaliana protein match is: Dihydrodipicolinate reductase, bacterial/plant (TAIR:AT2G44040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g24020.1 : 227.0) no description available & (chl4|515549 : 217.0) no description available & (gnl|cdd|80473 : 83.7) no description available & (ipr016040 : 42.414116) NAD(P)-binding domain & (reliability: 454.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4025 PE=4 SV=1)'" P '13.1.3.5.3' 'amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase' 'tr|b7g959|b7g959_phatc' "'(gnl|cdd|82293 : 515.0) no description available & (at4g33680 : 462.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|517813 : 448.0) no description available & (loc_os03g18810.1 : 446.0) no description available & (gnl|cdd|35478 : 276.0) no description available & (ipr015421 : 111.21723) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (o82030|his8_tobac : 43.1) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (reliability: 924.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22909 PE=3 SV=1)'" P '13.1.3.5.5' 'amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase' 'tr|b7g3a2|b7g3a2_phatc' "'(gnl|cdd|83758 : 251.0) no description available & (chl4|511658 : 106.0) no description available & (gnl|cdd|35841 : 84.6) no description available & (loc_os02g24354.1 : 84.3) no description available & (ipr009006 : 83.23555) Alanine racemase/group IV decarboxylase, C-terminal & (at3g14390 : 82.0) Pyridoxal-dependent decarboxylase family protein; FUNCTIONS IN: diaminopimelate decarboxylase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Alanine racemase/group IV decarboxylase, C-terminal (InterPro:IPR009006), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644), Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Diaminopimelate decarboxylase (InterPro:IPR002986), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653); BEST Arabidopsis thaliana protein match is: Pyridoxal-dependent decarboxylase family protein (TAIR:AT5G11880.1); Has 13020 Blast hits to 12980 proteins in 2586 species: Archae - 150; Bacteria - 7800; Metazoa - 435; Fungi - 194; Plants - 400; Viruses - 27; Other Eukaryotes - 4014 (source: NCBI BLink). & (reliability: 164.0) & (original description: Diaminopimelate decarboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21592 PE=3 SV=1)'" P '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'tr|b7fwt4|b7fwt4_phatc' "'(gnl|cdd|81934 : 352.0) no description available & (ipr001342 : 108.87543) Homoserine dehydrogenase, catalytic & (gnl|cdd|35676 : 66.2) no description available & (loc_os08g25390.1 : 65.1) no description available & (p49079|akh1_maize : 64.3) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (at1g31230 : 63.9) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (chl4|519187 : 63.9) no description available & (reliability: 127.8) & (original description: Homoserine dehydrogenase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26813 PE=3 SV=1)'" P '13.1.3.6.1.1' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate kinase' 'tr|b7g5h9|b7g5h9_phatc' "'(gnl|cdd|35677 : 404.0) no description available & (at5g14060 : 380.0) lysine-sensitive aspartate kinase; CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink). & (loc_os07g20544.2 : 376.0) no description available & (gnl|cdd|30873 : 370.0) no description available & (chl4|510415 : 368.0) no description available & (p49079|akh1_maize : 180.0) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (ipr001048 : 160.71095) Aspartate/glutamate/uridylate kinase & (reliability: 760.0) & (original description: Aspartokinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47956 PE=3 SV=1)'" P '13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'tr|b7fwt4|b7fwt4_phatc' "'(gnl|cdd|81934 : 352.0) no description available & (ipr001342 : 108.87543) Homoserine dehydrogenase, catalytic & (gnl|cdd|35676 : 66.2) no description available & (loc_os08g25390.1 : 65.1) no description available & (p49079|akh1_maize : 64.3) Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (at1g31230 : 63.9) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase i (AK-HSDH I); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase ii (TAIR:AT4G19710.2); Has 17266 Blast hits to 16993 proteins in 2572 species: Archae - 397; Bacteria - 11403; Metazoa - 7; Fungi - 300; Plants - 257; Viruses - 0; Other Eukaryotes - 4902 (source: NCBI BLink). & (chl4|519187 : 63.9) no description available & (reliability: 116.4) & (original description: Homoserine dehydrogenase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26813 PE=3 SV=1)'" P '13.1.3.6.1.10' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase' 'tr|b7g7e3|b7g7e3_phatc' "'(gnl|cdd|81934 : 369.0) no description available & (ipr001342 : 117.61817) Homoserine dehydrogenase, catalytic & (at4g19710 : 83.6) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.; aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II); FUNCTIONS IN: homoserine dehydrogenase activity, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Homoserine dehydrogenase, catalytic (InterPro:IPR001342), Amino acid-binding ACT (InterPro:IPR002912), Aspartate/homoserine dehydrogenase, NAD-binding (InterPro:IPR005106), Aspartate kinase, conserved site (InterPro:IPR018042), NAD(P)-binding domain (InterPro:IPR016040), Aspartate kinase domain (InterPro:IPR001341), Bifunctional aspartokinase/homoserine dehydrogenase I (InterPro:IPR011147), Homoserine dehydrogenase, conserved site (InterPro:IPR019811); BEST Arabidopsis thaliana protein match is: aspartate kinase-homoserine dehydrogenase i (TAIR:AT1G31230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35676 : 82.8) no description available & (chl4|519187 : 82.4) no description available & (loc_os08g25390.1 : 80.5) no description available & (p49080|akh2_maize : 78.6) Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] - Zea mays (Maize) & (reliability: 167.2) & (original description: Homoserine dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48694 PE=3 SV=1)'" P '13.1.3.6.1.2' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.aspartate semialdehyde dehydrogenase' 'tr|b7fux7|b7fux7_phatc' "'(gnl|cdd|81990 : 352.0) no description available & (at1g14810 : 221.0) encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis; semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink). & (loc_os03g55280.1 : 201.0) no description available & (chl4|519517 : 196.0) no description available & (gnl|cdd|39974 : 185.0) no description available & (ipr016040 : 114.792786) NAD(P)-binding domain & (reliability: 540.10596) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10757 PE=3 SV=1)'" P '13.1.3.6.1.4' 'amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase' 'tr|b7g1b0|b7g1b0_phatc' "'(gnl|cdd|80839 : 241.0) no description available & (gnl|cdd|36750 : 99.4) no description available & (at2g17265 : 47.8) Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.; homoserine kinase (HSK); FUNCTIONS IN: homoserine kinase activity; INVOLVED IN: methionine biosynthetic process, threonine biosynthetic process, response to fungus, response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Homoserine kinase (InterPro:IPR000870), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: homoserine kinase, putative / HSK, putative (TAIR:AT4G35295.1); Has 6092 Blast hits to 6088 proteins in 1935 species: Archae - 296; Bacteria - 4868; Metazoa - 7; Fungi - 124; Plants - 47; Viruses - 0; Other Eukaryotes - 750 (source: NCBI BLink). & (ipr014721 : 45.95639) Ribosomal protein S5 domain 2-type fold, subgroup & (loc_os02g58510.1 : 35.0) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46461 PE=3 SV=1)'" P '13.1.4.1.1' 'amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase' 'tr|b7g2t9|b7g2t9_phatc' "'(gnl|cdd|39368 : 311.0) no description available & (gnl|cdd|30378 : 283.0) no description available & (p09342|ilv1_tobac : 197.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (loc_os02g30630.2 : 196.0) no description available & (at3g48560 : 189.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (chl4|520369 : 175.0) no description available & (ipr012001 : 76.67845) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain & (reliability: 378.0) & (original description: Carboxy-lyase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56476 PE=3 SV=1)'" P '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'tr|b7g3q9|b7g3q9_phatc' "'(gnl|cdd|29568 : 232.0) no description available & (gnl|cdd|36193 : 225.0) no description available & (at1g50110 : 178.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT1G50090.1); Has 12195 Blast hits to 12195 proteins in 2532 species: Archae - 155; Bacteria - 7654; Metazoa - 266; Fungi - 412; Plants - 250; Viruses - 0; Other Eukaryotes - 3458 (source: NCBI BLink). & (loc_os05g48450.6 : 176.0) no description available & (chl4|522677 : 148.0) no description available & (reliability: 356.0) & (original description: Branched-chain-amino-acid aminotransferase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28585 PE=3 SV=1)'" P '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'tr|b7fp52|b7fp52_phatc' "'(gnl|cdd|35383 : 64.1) no description available & (gnl|cdd|31389 : 53.5) no description available & (chl4|523067 : 45.8) no description available & (at1g04600 : 44.3) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (loc_os02g57190.1 : 43.9) no description available & (q5jly8|goga5_orysa : 36.6) Golgin-84 - Oryza sativa (Rice) & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42675 PE=4 SV=1)'" P '13.1.4.1.4' 'amino acid metabolism.synthesis.branched chain group.common.branched-chain amino acid aminotransferase' 'tr|b7ft57|b7ft57_phatc' "'(gnl|cdd|36193 : 369.0) no description available & (gnl|cdd|29568 : 325.0) no description available & (loc_os05g48450.6 : 213.0) no description available & (at5g65780 : 207.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (chl4|522677 : 170.0) no description available & (ipr001544 : 52.777134) Aminotransferase, class IV & (reliability: 414.0) & (original description: Branched-chain-amino-acid aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43697 PE=3 SV=1)'" P '13.1.4.4.1' 'amino acid metabolism.synthesis.branched chain group.leucine specific.2-isopropylmalate synthase' 'tr|b7fup6|b7fup6_phatc' "'(gnl|cdd|80776 : 669.0) no description available & (at1g18500 : 643.0) Encodes an active Arabidopsis isopropylmalate synthase IPMS1. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS1 can be compensated by a second isopropylmalate synthase gene IPMS2 (At1g74040).; methylthioalkylmalate synthase-like 4 (MAML-4); FUNCTIONS IN: 2-isopropylmalate synthase activity; INVOLVED IN: leucine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain (InterPro:IPR013709), Pyruvate carboxyltransferase (InterPro:IPR000891), Bacterial 2-isopropylmalate synthase (InterPro:IPR005671); BEST Arabidopsis thaliana protein match is: 2-isopropylmalate synthase 1 (TAIR:AT1G74040.1); Has 16947 Blast hits to 16939 proteins in 2437 species: Archae - 505; Bacteria - 8907; Metazoa - 233; Fungi - 482; Plants - 265; Viruses - 0; Other Eukaryotes - 6555 (source: NCBI BLink). & (loc_os12g04440.1 : 642.0) no description available & (q39891|leu1_soybn : 568.0) Probable 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) - Glycine max (Soybean) & (gnl|cdd|37578 : 513.0) no description available & (chl4|523009 : 507.0) no description available & (ipr000891 : 155.04973) Pyruvate carboxyltransferase & (reliability: 1286.0) & (original description: 2-isopropylmalate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44618 PE=3 SV=1)'" P '13.1.4.4.3' 'amino acid metabolism.synthesis.branched chain group.leucine specific.3-isopropylmalate dehydrogenase' 'tr|b7g1x8|b7g1x8_phatc' "'(ipr001804 : 1500.0) Isocitrate and isopropylmalate dehydrogenases family & (gnl|cdd|80743 : 536.0) no description available & (gnl|cdd|36005 : 421.0) no description available & (loc_os03g45320.1 : 410.0) no description available & (at1g31180 : 407.0) The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 3 (IMD3); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, response to salt stress, metabolic process; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, plastid; EXPRESSED IN: fruit, root, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 1 (TAIR:AT5G14200.1); Has 15253 Blast hits to 15253 proteins in 2616 species: Archae - 395; Bacteria - 8280; Metazoa - 576; Fungi - 831; Plants - 243; Viruses - 0; Other Eukaryotes - 4928 (source: NCBI BLink). & (p29102|leu3_brana : 405.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (chl4|524462 : 387.0) no description available & (reliability: 814.0) & (original description: 3-isopropylmalate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=IPMDH PE=3 SV=1)'" P '13.1.4.5' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific' 'tr|b7fv67|b7fv67_phatc' "'(gnl|cdd|36464 : 387.0) no description available & (gnl|cdd|82529 : 358.0) no description available & (ipr001926 : 155.26746) Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily & (q39469|thd1_cicar : 120.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (chl4|518397 : 108.0) no description available & (loc_os03g50510.1 : 106.0) no description available & (at4g11640 : 98.2) Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases.; serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink). & (reliability: 196.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19518 PE=4 SV=1)'" P '13.1.4.5.1' 'amino acid metabolism.synthesis.branched chain group.isoleucine specific.threonine ammonia-lyase' 'tr|b7fv67|b7fv67_phatc' "'(gnl|cdd|36464 : 387.0) no description available & (gnl|cdd|82529 : 358.0) no description available & (ipr001926 : 155.26746) Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily & (q39469|thd1_cicar : 120.0) Threonine dehydratase biosynthetic, chloroplast precursor (EC 4.3.1.19) (Threonine deaminase) (TD) - Cicer arietinum (Chickpea) (Garbanzo) & (chl4|518397 : 108.0) no description available & (loc_os03g50510.1 : 106.0) no description available & (at4g11640 : 98.2) Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases.; serine racemase (SR); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Serine/threonine dehydratase, pyridoxal-phosphate-binding site (InterPro:IPR000634); BEST Arabidopsis thaliana protein match is: L-O-methylthreonine resistant 1 (TAIR:AT3G10050.1); Has 19715 Blast hits to 19705 proteins in 2624 species: Archae - 539; Bacteria - 13612; Metazoa - 549; Fungi - 719; Plants - 186; Viruses - 2; Other Eukaryotes - 4108 (source: NCBI BLink). & (reliability: 191.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19518 PE=4 SV=1)'" P '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'tr|b7fy73|b7fy73_phatc' "'(chl4|524862 : 330.0) no description available & (gnl|cdd|83983 : 184.0) no description available & (gnl|cdd|35291 : 149.0) no description available & (loc_os04g55720.1 : 98.2) no description available & (at1g17745 : 92.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (ipr016040 : 80.05985) NAD(P)-binding domain & (p13443|dhgy_cucsa : 71.6) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 184.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27166 PE=3 SV=1)'" P '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'tr|b7fy72|b7fy72_phatc' "'(chl4|524862 : 306.0) no description available & (gnl|cdd|83983 : 191.0) no description available & (gnl|cdd|35291 : 141.0) no description available & (loc_os04g55720.1 : 89.0) no description available & (at1g17745 : 83.6) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (ipr016040 : 77.499435) NAD(P)-binding domain & (p13443|dhgy_cucsa : 67.0) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 167.2) & (original description: 2-hydroxyacid dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45592 PE=3 SV=1)'" P '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'tr|b7g8z0|b7g8z0_phatc' "'(chl4|516867 : 265.0) no description available & (gnl|cdd|30460 : 238.0) no description available & (gnl|cdd|35292 : 163.0) no description available & (ipr016040 : 128.84946) NAD(P)-binding domain & (loc_os06g44460.1 : 107.0) no description available & (at1g17745 : 105.0) encodes a 3-Phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), NAD(P)-binding domain (InterPro:IPR016040), Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1). & (q9sxp2|fdh1_orysa : 81.3) Formate dehydrogenase 1, mitochondrial precursor (EC 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) - Oryza sativa (Rice) & (reliability: 210.0) & (original description: 2-hydroxyacid dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48946 PE=3 SV=1)'" P '13.1.5.1.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase' 'tr|b7s4e4|b7s4e4_phatc' "'(gnl|cdd|84741 : 273.0) no description available & (chl4|524445 : 253.0) no description available & (gnl|cdd|35291 : 220.0) no description available & (loc_os04g55720.1 : 126.0) no description available & (at3g19480 : 122.0) D-3-phosphoglycerate dehydrogenase; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, L-serine biosynthetic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 31099 Blast hits to 31093 proteins in 2807 species: Archae - 469; Bacteria - 19090; Metazoa - 735; Fungi - 1166; Plants - 566; Viruses - 5; Other Eukaryotes - 9068 (source: NCBI BLink). & (ipr016040 : 120.70201) NAD(P)-binding domain & (p13443|dhgy_cucsa : 98.6) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 244.0) & (original description: 2-hydroxyacid dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1469 PE=3 SV=1)'" P '13.1.5.2.2' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.glycine.glycine transaminase' 'tr|b7fuh0|b7fuh0_phatc' "'(gnl|cdd|35479 : 549.0) no description available & (at1g72330 : 467.0) Encodes for alanine aminotransferase ALAAT2.; alanine aminotransferase 2 (ALAAT2); FUNCTIONS IN: copper ion binding, L-alanine:2-oxoglutarate aminotransferase activity; INVOLVED IN: biosynthetic process; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferas (TAIR:AT1G17290.1). & (p52894|ala2_horvu : 462.0) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) - Hordeum vulgare (Barley) & (loc_os07g42600.1 : 457.0) no description available & (chl4|523569 : 457.0) no description available & (gnl|cdd|30785 : 210.0) no description available & (ipr015421 : 126.98467) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 862.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34010 PE=4 SV=1)'" P '13.1.5.3' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine' 'tr|b7fus8|b7fus8_phatc' "'(at5g65720 : 532.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (loc_os09g16910.3 : 521.0) no description available & (chl4|519973 : 521.0) no description available & (gnl|cdd|31301 : 514.0) no description available & (gnl|cdd|36762 : 470.0) no description available & (ipr015421 : 213.9581) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (q52rg7|sgpl_orysa : 36.6) Sphingosine-1-phosphate lyase precursor (EC 4.1.2.27) (SP-lyase) (SPL) (Sphingosine-1-phosphate aldolase) - Oryza sativa (Rice) & (reliability: 1064.0) & (original description: Precursor of desulfurase cysteine desulfurase IscS OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=IscS PE=3 SV=1)'" P '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'tr|b7frh0|b7frh0_phatc' "'(gnl|cdd|36466 : 342.0) no description available & (gnl|cdd|30381 : 332.0) no description available & (p32260|cyskp_spiol : 294.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Spinacia oleracea (Spinach) & (chl4|516783 : 291.0) no description available & (at3g59760 : 284.0) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC; O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22643 Blast hits to 22626 proteins in 2678 species: Archae - 432; Bacteria - 15847; Metazoa - 414; Fungi - 670; Plants - 570; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink). & (loc_os12g42980.1 : 277.0) no description available & (ipr001926 : 106.762886) Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily & (reliability: 568.0) & (original description: Cysteine synthase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=cysK PE=3 SV=1)'" P '13.1.5.3.1' 'amino acid metabolism.synthesis.serine-glycine-cysteine group.cysteine.OASTL' 'tr|b7s487|b7s487_phatc' "'(gnl|cdd|30381 : 406.0) no description available & (gnl|cdd|36466 : 406.0) no description available & (o81155|cyskp_soltu : 345.0) Cysteine synthase, chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B) - Solanum tuberosum (Potato) & (at3g59760 : 334.0) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC; O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22643 Blast hits to 22626 proteins in 2678 species: Archae - 432; Bacteria - 15847; Metazoa - 414; Fungi - 670; Plants - 570; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink). & (loc_os01g74650.3 : 332.0) no description available & (chl4|516783 : 327.0) no description available & (ipr001926 : 126.94328) Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily & (reliability: 668.0) & (original description: Cysteine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CysK PE=3 SV=1)'" P '13.1.6.1.1' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-deoxy-D-arabino-heptulosonate 7-phosphate synthase' 'tr|b7frj9|b7frj9_phatc' "'(ipr002480 : 1500.0) DAHP synthetase, class II & (gnl|cdd|33013 : 633.0) no description available & (at4g33510 : 604.0) Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis; 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DHS2); FUNCTIONS IN: protein binding, 3-deoxy-7-phosphoheptulonate synthase activity; INVOLVED IN: chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DAHP synthetase, class II (InterPro:IPR002480); BEST Arabidopsis thaliana protein match is: Class-II DAHP synthetase family protein (TAIR:AT1G22410.1); Has 3601 Blast hits to 3584 proteins in 682 species: Archae - 0; Bacteria - 1231; Metazoa - 0; Fungi - 107; Plants - 172; Viruses - 0; Other Eukaryotes - 2091 (source: NCBI BLink). & (p21357|arof_soltu : 598.0) Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHP synthetase 1) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1) - Solanum tuberosum (Potato) & (loc_os03g27230.1 : 597.0) no description available & (chl4|517651 : 568.0) no description available & (reliability: 3833.0) & (original description: Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AroA PE=3 SV=1)'" P '13.1.6.1.10' 'amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase' 'tr|b7fy07|b7fy07_phatc' "'(gnl|cdd|30518 : 236.0) no description available & (loc_os12g34874.1 : 138.0) no description available & (at3g06350 : 129.0) MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). & (ipr016040 : 97.84801) NAD(P)-binding domain & (chl4|525651 : 70.5) no description available & (gnl|cdd|35911 : 58.9) no description available & (reliability: 332.00836) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45535 PE=4 SV=1)'" P '13.1.6.1.2' 'amino acid metabolism.synthesis.aromatic aa.chorismate.3-dehydroquinate synthase' 'tr|b7g177|b7g177_phatc' "'(gnl|cdd|80438 : 463.0) no description available & (at5g66120 : 460.0) 3-dehydroquinate synthase, putative; FUNCTIONS IN: 3-dehydroquinate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase AroB, subgroup (InterPro:IPR016037), 3-dehydroquinate synthase AroB (InterPro:IPR002658); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os09g36800.1 : 451.0) no description available & (chl4|525406 : 449.0) no description available & (ipr002658 : 265.41348) 3-dehydroquinate synthase AroB & (gnl|cdd|35911 : 75.8) no description available & (reliability: 1384.4736) & (original description: 3-dehydroquinate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AroB PE=3 SV=1)'" P '13.1.6.1.6' 'amino acid metabolism.synthesis.aromatic aa.chorismate.5-enolpyruvylshikimate-3-phosphate synthase' 'tr|b7fss5|b7fss5_phatc' "'(chl4|521092 : 459.0) no description available & (at2g45300 : 445.0) encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis; RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta; FUNCTIONS IN: 3-phosphoshikimate 1-carboxyvinyltransferase activity; INVOLVED IN: glyphosate metabolic process, chorismate biosynthetic process, aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: 3-phosphoshikimate 1-carboxyvinyltransferase, core (InterPro:IPR001986), 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup (InterPro:IPR006264), RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (InterPro:IPR013792); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 13824 Blast hits to 13779 proteins in 2767 species: Archae - 215; Bacteria - 9594; Metazoa - 6; Fungi - 149; Plants - 206; Viruses - 0; Other Eukaryotes - 3654 (source: NCBI BLink). & (gnl|cdd|84005 : 442.0) no description available & (p11043|aroa_pethy : 436.0) 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) - Petunia hybrida (Petunia) & (loc_os06g04280.1 : 417.0) no description available & (gnl|cdd|35911 : 362.0) no description available & (ipr001986 : 298.30646) Enolpyruvate transferase domain & (reliability: 1412.0364) & (original description: 3-phosphoshikimate 1-carboxyvinyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=EPSPsy PE=3 SV=1)'" P '13.1.6.1.7' 'amino acid metabolism.synthesis.aromatic aa.chorismate.chorismate synthase' 'tr|b7fs76|b7fs76_phatc' "'(ipr000453 : 1500.0) Chorismate synthase & (chl4|511861 : 503.0) no description available & (gnl|cdd|81556 : 502.0) no description available & (gnl|cdd|39692 : 499.0) no description available & (at1g48850 : 493.0) embryo defective 1144 (EMB1144); FUNCTIONS IN: chorismate synthase activity; INVOLVED IN: aromatic amino acid family biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chorismate synthase, conserved site (InterPro:IPR020541), Chorismate synthase (InterPro:IPR000453); BEST Arabidopsis thaliana protein match is: RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta (TAIR:AT1G48860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g14990.1 : 473.0) no description available & (reliability: 3611.0) & (original description: Chorismate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43429 PE=3 SV=1)'" P '13.1.6.2' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine' 'tr|b7g959|b7g959_phatc' "'(gnl|cdd|82293 : 515.0) no description available & (at4g33680 : 462.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|517813 : 448.0) no description available & (loc_os03g18810.1 : 446.0) no description available & (gnl|cdd|35478 : 276.0) no description available & (ipr015421 : 111.21723) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (o82030|his8_tobac : 43.1) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (reliability: 880.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22909 PE=3 SV=1)'" P '13.1.6.3.1' 'amino acid metabolism.synthesis.aromatic aa.phenylalanine.arogenate dehydratase / prephenate dehydratase' 'tr|b7g3d2|b7g3d2_phatc' "'(gnl|cdd|30426 : 282.0) no description available & (gnl|cdd|38008 : 250.0) no description available & (loc_os03g17730.1 : 247.0) no description available & (at1g11790 : 244.0) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].; arogenate dehydratase 1 (ADT1); FUNCTIONS IN: arogenate dehydratase activity, prephenate dehydratase activity; INVOLVED IN: L-phenylalanine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 2 (TAIR:AT3G07630.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|523076 : 238.0) no description available & (ipr001086 : 116.43859) Prephenate dehydratase & (reliability: 488.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_3267 PE=4 SV=1)'" P '13.1.6.5.4' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase' 'tr|b7fxg0|b7fxg0_phatc' "'(gnl|cdd|73363 : 98.6) no description available & (gnl|cdd|39402 : 64.6) no description available & (ipr013785 : 51.573162) Aldolase-type TIM barrel & (loc_os04g39270.2 : 47.8) no description available & (at2g04400 : 45.1) Aldolase-type TIM barrel family protein; FUNCTIONS IN: indole-3-glycerol-phosphate synthase activity, copper ion binding; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Indole-3-glycerol phosphate synthase, conserved site (InterPro:IPR001468), Indole-3-glycerol phosphate synthase (InterPro:IPR013798); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G48220.1); Has 8050 Blast hits to 8050 proteins in 2237 species: Archae - 197; Bacteria - 5328; Metazoa - 3; Fungi - 164; Plants - 82; Viruses - 0; Other Eukaryotes - 2276 (source: NCBI BLink). & (chl4|515002 : 38.9) no description available & (reliability: 90.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45371 PE=4 SV=1)'" P '13.1.6.5.5' 'amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase' 'tr|b7fqi2|b7fqi2_phatc' "'(gnl|cdd|81368 : 696.0) no description available & (gnl|cdd|36609 : 513.0) no description available & (at5g54810 : 486.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|520675 : 484.0) no description available & (loc_os08g04180.1 : 474.0) no description available & (p43284|trpb2_maize : 470.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (ipr013785 : 209.00461) Aldolase-type TIM barrel & (reliability: 972.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41702 PE=3 SV=1)'" P '13.1.7.1' 'amino acid metabolism.synthesis.histidine.ATP phosphoribosyl transferase' 'tr|b7fst0|b7fst0_phatc' "'(gnl|cdd|38042 : 272.0) no description available & (gnl|cdd|80689 : 266.0) no description available & (loc_os03g04169.1 : 110.0) no description available & (ipr013820 : 100.84374) ATP phosphoribosyltransferase, catalytic domain & (at1g09795 : 94.0) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis; ATP phosphoribosyl transferase 2 (ATP-PRT2); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 1 (TAIR:AT1G58080.1); Has 6354 Blast hits to 6354 proteins in 2167 species: Archae - 206; Bacteria - 4075; Metazoa - 2; Fungi - 141; Plants - 71; Viruses - 0; Other Eukaryotes - 1859 (source: NCBI BLink). & (chl4|526306 : 94.0) no description available & (reliability: 188.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10025 PE=3 SV=1)'" P '13.1.7.2' 'amino acid metabolism.synthesis.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase' 'tr|b5y4h0|b5y4h0_phatc' "'(gnl|cdd|39512 : 207.0) no description available & (gnl|cdd|81034 : 113.0) no description available & (chl4|514467 : 74.7) no description available & (loc_os01g16940.1 : 72.0) no description available & (at1g31860 : 68.9) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (ipr002496 : 47.823658) Phosphoribosyl-AMP cyclohydrolase & (reliability: 137.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_3140 PE=4 SV=1)'" P '13.1.7.4' 'amino acid metabolism.synthesis.histidine.N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase' 'tr|b7fvq7|b7fvq7_phatc' "'(gnl|cdd|35842 : 633.0) no description available & (at4g26900 : 566.0) encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway; HIS HF (AT-HF); FUNCTIONS IN: imidazoleglycerol-phosphate synthase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Imidazole glycerol phosphate synthase, subunit H (InterPro:IPR010139), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Ribulose-phosphate binding barrel (InterPro:IPR011060), Histidine biosynthesis, HisF (InterPro:IPR004651), Glutamine amidotransferase type 1 (InterPro:IPR017926), Histidine biosynthesis (InterPro:IPR006062), Imidazole glycerol phosphate synthase HisHF (InterPro:IPR014640); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g15120.1 : 566.0) no description available & (chl4|512444 : 383.0) no description available & (gnl|cdd|30456 : 260.0) no description available & (ipr013785 : 209.65178) Aldolase-type TIM barrel & (reliability: 1132.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19324 PE=3 SV=1)'" P '13.1.7.7' 'amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase' 'tr|b7g747|b7g747_phatc' "'(gnl|cdd|35852 : 350.0) no description available & (gnl|cdd|30428 : 303.0) no description available & (chl4|511970 : 190.0) no description available & (loc_os02g47940.1 : 186.0) no description available & (at1g71920 : 185.0) Encodes a protein that is believed to act as a histidinol-phosphate transaminase involved in histidine biosynthesis. If the gene encoding the other protein shown to have this function, HISN6A (AT5G10330), is disrupted, a residual level of histidine biosynthesis continues, suggesting that HISN6B can somewhat compensate for the loss of HISN6A.; HISTIDINE BIOSYNTHESIS 6B (HISN6B); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Histidinol-phosphate aminotransferase (InterPro:IPR005861), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: histidinol phosphate aminotransferase 1 (TAIR:AT5G10330.2); Has 35243 Blast hits to 35243 proteins in 2924 species: Archae - 1037; Bacteria - 25751; Metazoa - 263; Fungi - 377; Plants - 462; Viruses - 0; Other Eukaryotes - 7353 (source: NCBI BLink). & (o82030|his8_tobac : 183.0) Histidinol-phosphate aminotransferase, chloroplast precursor (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) - Nicotiana tabacum (Common tobacco) & (ipr004839 : 124.58806) Aminotransferase, class I/classII & (reliability: 370.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38891 PE=3 SV=1)'" P '13.1.7.9' 'amino acid metabolism.synthesis.histidine.histidinol dehydrogenase' 'tr|b7fpz7|b7fpz7_phatc' "'(gnl|cdd|80767 : 360.0) no description available & (gnl|cdd|37908 : 233.0) no description available & (ipr012131 : 229.67072) Histidinol dehydrogenase & (q5nay4|hisx_orysa : 186.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (loc_os01g13190.1 : 186.0) no description available & (at5g63890 : 184.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (chl4|518488 : 182.0) no description available & (reliability: 368.0) & (original description: Histidinol dehydrogenase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9654 PE=3 SV=1)'" P '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'tr|b5y3w5|b5y3w5_phatc' "'(chl4|511373 : 300.0) no description available & (gnl|cdd|35407 : 285.0) no description available & (gnl|cdd|85571 : 204.0) no description available & (at5g38710 : 203.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os10g40360.1 : 161.0) no description available & (ipr002872 : 152.4169) Proline dehydrogenase & (reliability: 672.7296) & (original description: Proline dehydrogenase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_1155 PE=3 SV=1)'" P '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'tr|b7fpn7|b7fpn7_phatc' "'(at5g62530 : 609.0) Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|513273 : 598.0) no description available & (loc_os05g45960.1 : 514.0) no description available & (gnl|cdd|84580 : 150.0) no description available & (ipr016162 : 101.98709) Aldehyde dehydrogenase, N-terminal & (gnl|cdd|37661 : 93.8) no description available & (p17202|badh_spiol : 83.6) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 1218.0) & (original description: Aldehyde dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31906 PE=4 SV=1)'" P '13.2.2.2' 'amino acid metabolism.degradation.glutamate family.proline' 'tr|b7gaw7|b7gaw7_phatc' "'(gnl|cdd|36804 : 119.0) no description available & (gnl|cdd|47971 : 110.0) no description available & (at2g43080 : 90.9) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (loc_os04g27850.1 : 90.1) no description available & (chl4|520646 : 75.5) no description available & (reliability: 164.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49523 PE=4 SV=1)'" P '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'tr|b7g0h9|b7g0h9_phatc' "'(gnl|cdd|36616 : 580.0) no description available & (chl4|512299 : 516.0) no description available & (gnl|cdd|74563 : 465.0) no description available & (at5g46180 : 434.0) Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.; ornithine-delta-aminotransferase (DELTA-OAT); FUNCTIONS IN: ornithine-oxo-acid transaminase activity, zinc ion binding; INVOLVED IN: ornithine catabolic process, hyperosmotic salinity response, proline biosynthetic process, arginine catabolic process to glutamate; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Ornithine aminotransferase (InterPro:IPR010164), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 1 (TAIR:AT1G80600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g44150.1 : 424.0) no description available & (ipr005814 : 247.45541) Aminotransferase class-III & (p45621|gsa_soybn : 101.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Glycine max (Soybean) & (reliability: 868.0) & (original description: Ornithine aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=OAT PE=3 SV=1)'" P '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'tr|b7gcg6|b7gcg6_phatc' "'(gnl|cdd|84017 : 246.0) no description available & (gnl|cdd|38334 : 184.0) no description available & (at5g14800 : 160.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (q04708|p5cr_pea : 150.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Pisum sativum (Garden pea) & (chl4|520523 : 148.0) no description available & (loc_os01g71990.1 : 142.0) no description available & (ipr016040 : 77.499435) NAD(P)-binding domain & (reliability: 320.0) & (original description: Pyrroline-5-carboxylate reductase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16375 PE=3 SV=1)'" P '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'tr|b7fss9|b7fss9_phatc' "'(gnl|cdd|30693 : 250.0) no description available & (gnl|cdd|38334 : 239.0) no description available & (chl4|520523 : 206.0) no description available & (p17817|p5cr_soybn : 199.0) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase) - Glycine max (Soybean) & (at5g14800 : 193.0) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.; pyrroline-5- carboxylate (P5C) reductase (P5CR); CONTAINS InterPro DOMAIN/s: NADP oxidoreductase, coenzyme F420-dependent (InterPro:IPR004455), NAD(P)-binding domain (InterPro:IPR016040), Delta 1-pyrroline-5-carboxylate reductase (InterPro:IPR000304); Has 7429 Blast hits to 7426 proteins in 2378 species: Archae - 102; Bacteria - 5104; Metazoa - 368; Fungi - 229; Plants - 70; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink). & (loc_os01g71990.1 : 188.0) no description available & (ipr016040 : 89.10767) NAD(P)-binding domain & (reliability: 386.0) & (original description: Pyrroline-5-carboxylate reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25379 PE=3 SV=1)'" P '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'tr|b7g7w5|b7g7w5_phatc' "'(at1g67550 : 1009.0) Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation.; urease (URE); CONTAINS InterPro DOMAIN/s: Urease, alpha subunit (InterPro:IPR005848), Urease, alpha subunit, conserved site (InterPro:IPR017950), Amidohydrolase 1 (InterPro:IPR006680), Urease, alpha/gamma subunit (InterPro:IPR002026), Urease, alpha subunit, core (InterPro:IPR017952), Metal-dependent hydrolase, composite domain (InterPro:IPR011059), Urease, beta subunit (InterPro:IPR002019), Urease (InterPro:IPR008221), Urease, alpha subunit, C-terminal (InterPro:IPR017951), Urease alpha-subunit, N-terminal (InterPro:IPR011612); Has 10097 Blast hits to 10094 proteins in 1139 species: Archae - 93; Bacteria - 7117; Metazoa - 16; Fungi - 228; Plants - 47; Viruses - 0; Other Eukaryotes - 2596 (source: NCBI BLink). & (gnl|cdd|30031 : 942.0) no description available & (p08298|urea_soybn : 177.0) Urease (EC 3.5.1.5) (Urea amidohydrolase) (Fragment) - Glycine max (Soybean) & (ipr006680 : 134.16612) Amidohydrolase 1 & (reliability: 2018.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29702 PE=3 SV=1)'" P '13.2.2.3' 'amino acid metabolism.degradation.glutamate family.arginine' 'tr|b7gcn5|b7gcn5_phatc' "'(gnl|cdd|30360 : 233.0) no description available & (ipr006035 : 217.15634) Ureohydrolase & (gnl|cdd|38175 : 184.0) no description available & (at4g08900 : 96.3) Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.; arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink). & (loc_os04g01590.1 : 96.3) no description available & (o49046|argi_soybn : 78.6) Arginase (EC 3.5.3.1) - Glycine max (Soybean) & (reliability: 192.6) & (original description: Agmatinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40880 PE=3 SV=1)'" P '13.2.3.2' 'amino acid metabolism.degradation.aspartate family.threonine' 'tr|b7g085|b7g085_phatc' "'(gnl|cdd|38155 : 135.0) no description available & (chl4|521973 : 131.0) no description available & (loc_os05g22970.1 : 130.0) no description available & (o49818|lgul_cicar : 125.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 123.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|77707 : 70.5) no description available & (reliability: 246.0) & (original description: Lactyolglutathione lyase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GLXI PE=4 SV=1)'" P '13.2.3.4' 'amino acid metabolism.degradation.aspartate family.methionine' 'tr|b7ft14|b7ft14_phatc' "'(at4g13940 : 693.0) Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.; HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: methylation-dependent chromatin silencing, one-carbon metabolic process, posttranscriptional gene silencing, embryo development ending in seed dormancy; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 34 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), NAD(P)-binding domain (InterPro:IPR016040), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-l-homocysteine (SAH) hydrolase 2 (TAIR:AT3G23810.1); Has 6788 Blast hits to 6786 proteins in 1444 species: Archae - 223; Bacteria - 2243; Metazoa - 514; Fungi - 135; Plants - 203; Viruses - 0; Other Eukaryotes - 3470 (source: NCBI BLink). & (chl4|521588 : 691.0) no description available & (p68173|sahh_tobac : 688.0) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Cytokinin-binding protein CBP57) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|80108 : 674.0) no description available & (loc_os11g26850.2 : 657.0) no description available & (gnl|cdd|36584 : 624.0) no description available & (ipr000043 : 296.697) Adenosylhomocysteinase & (reliability: 1386.0) & (original description: Adenosylhomocysteinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18319 PE=3 SV=1)'" P '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'tr|b5y3b5|b5y3b5_phatc' "'(gnl|cdd|36606 : 435.0) no description available & (gnl|cdd|82759 : 382.0) no description available & (ipr020616 : 159.63339) Thiolase, N-terminal & (at2g33150 : 155.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (loc_os10g31950.1 : 146.0) no description available & (chl4|517584 : 142.0) no description available & (reliability: 310.0) & (original description: Beta-ketoacyl-CoA thiolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=KCT3 PE=3 SV=1)'" P '13.2.4.1' 'amino acid metabolism.degradation.branched chain group.shared' 'tr|b7fz92|b7fz92_phatc' "'(gnl|cdd|36605 : 476.0) no description available & (gnl|cdd|29411 : 469.0) no description available & (at5g47720 : 235.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (loc_os01g02020.1 : 228.0) no description available & (ipr020616 : 195.45737) Thiolase, N-terminal & (chl4|517584 : 179.0) no description available & (reliability: 428.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45947 PE=3 SV=1)'" P '13.2.4.3' 'amino acid metabolism.degradation.branched chain group.valine' 'tr|b7gbu6|b7gbu6_phatc' "'(loc_os07g09060.1 : 547.0) no description available & (at2g14170 : 538.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase 6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (chl4|516570 : 502.0) no description available & (gnl|cdd|84580 : 416.0) no description available & (ipr015590 : 285.25818) Aldehyde dehydrogenase domain & (gnl|cdd|37661 : 252.0) no description available & (o24174|badh_orysa : 168.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1076.0) & (original description: Dehydrogenase methylmalonate-semialdhyde dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23467 PE=4 SV=1)'" P '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'tr|b5y5r5|b5y5r5_phatc' "'(gnl|cdd|29658 : 540.0) no description available & (gnl|cdd|35361 : 466.0) no description available & (loc_os05g03480.3 : 243.0) no description available & (q9fs88|ivd1_soltu : 229.0) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (at3g45300 : 218.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (chl4|523816 : 189.0) no description available & (ipr009075 : 163.91432) Acyl-CoA dehydrogenase/oxidase C-terminal & (reliability: 436.0) & (original description: Short chain acyl-coenzyme A dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACD1 PE=3 SV=1)'" P '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'tr|b7ftr6|b7ftr6_phatc' "'(gnl|cdd|83019 : 684.0) no description available & (gnl|cdd|35359 : 112.0) no description available & (ipr015396 : 80.93297) Acyl-CoA dehydrogenase, C-termina, bacterial type & (q9fs88|ivd1_soltu : 69.3) Isovaleryl-CoA dehydrogenase 1, mitochondrial precursor (EC 1.3.99.10) (IVD 1) - Solanum tuberosum (Potato) & (loc_os05g03480.3 : 65.9) no description available & (at3g51840 : 45.4) Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.; acyl-CoA oxidase 4 (ACX4); FUNCTIONS IN: oxidoreductase activity, acyl-CoA oxidase activity; INVOLVED IN: fatty acid beta-oxidation, short-chain fatty acid metabolic process, embryo development ending in seed dormancy; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 36828 Blast hits to 36765 proteins in 1995 species: Archae - 537; Bacteria - 24188; Metazoa - 1639; Fungi - 822; Plants - 341; Viruses - 0; Other Eukaryotes - 9301 (source: NCBI BLink). & (chl4|516987 : 42.0) no description available & (reliability: 87.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11014 PE=4 SV=1)'" P '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'tr|b7fz17|b7fz17_phatc' "'(ipr000022 : 1500.0) Carboxyl transferase & (gnl|cdd|34408 : 658.0) no description available & (gnl|cdd|35760 : 541.0) no description available & (loc_os08g32850.1 : 213.0) no description available & (at4g34030 : 211.0) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.; 3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|521090 : 196.0) no description available & (p12217|accd_marpo : 71.2) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) - Marchantia polymorpha (Liverwort) & (reliability: 422.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45886 PE=4 SV=1)'" P '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'tr|b7gcl6|b7gcl6_phatc' "'(gnl|cdd|34383 : 633.0) no description available & (gnl|cdd|35459 : 575.0) no description available & (at5g35360 : 345.0) Encodes biotin carboxylase subunit (CAC2).; acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2); CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), Acetyl-CoA carboxylase, biotin carboxylase (InterPro:IPR004549), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold (InterPro:IPR011761), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (TAIR:AT1G03090.2). & (chl4|525207 : 336.0) no description available & (loc_os12g41250.2 : 325.0) no description available & (q2qmg2|mcca_orysa : 323.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (ipr013816 : 179.50633) ATP-grasp fold, subdomain 2 & (reliability: 670.0) & (original description: Carboxylase propionyl-coa carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51245 PE=4 SV=1)'" P '13.2.4.4' 'amino acid metabolism.degradation.branched chain group.leucine' 'tr|b7ga98|b7ga98_phatc' "'(gnl|cdd|84404 : 1552.0) no description available & (gnl|cdd|35590 : 1445.0) no description available & (chl4|523008 : 688.0) no description available & (at1g03090 : 325.0) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.; MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 41492 Blast hits to 34824 proteins in 3674 species: Archae - 718; Bacteria - 26555; Metazoa - 1797; Fungi - 1117; Plants - 802; Viruses - 0; Other Eukaryotes - 10503 (source: NCBI BLink). & (loc_os12g41250.2 : 311.0) no description available & (q2qmg2|mcca_orysa : 310.0) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (ipr013785 : 294.6356) Aldolase-type TIM barrel & (reliability: 650.0) & (original description: Precursor of carboxylase pyruvate carboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PYC2 PE=4 SV=1)'" P '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'tr|b5y3b5|b5y3b5_phatc' "'(gnl|cdd|36606 : 435.0) no description available & (gnl|cdd|82759 : 382.0) no description available & (ipr020616 : 159.63339) Thiolase, N-terminal & (at2g33150 : 155.0) Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.; peroxisomal 3-ketoacyl-CoA thiolase 3 (PKT3); FUNCTIONS IN: acetyl-CoA C-acyltransferase activity; INVOLVED IN: fatty acid beta-oxidation, jasmonic acid biosynthetic process, response to wounding, fatty acid oxidation, glyoxysome organization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 4 (TAIR:AT1G04710.1); Has 22382 Blast hits to 22371 proteins in 2261 species: Archae - 414; Bacteria - 14116; Metazoa - 985; Fungi - 655; Plants - 282; Viruses - 0; Other Eukaryotes - 5930 (source: NCBI BLink). & (loc_os10g31950.1 : 146.0) no description available & (chl4|517584 : 142.0) no description available & (reliability: 292.0) & (original description: Beta-ketoacyl-CoA thiolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=KCT3 PE=3 SV=1)'" P '13.2.4.5' 'amino acid metabolism.degradation.branched chain group.isoleucine' 'tr|b7fz92|b7fz92_phatc' "'(gnl|cdd|36605 : 476.0) no description available & (gnl|cdd|29411 : 469.0) no description available & (at5g47720 : 235.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (loc_os01g02020.1 : 228.0) no description available & (ipr020616 : 195.45737) Thiolase, N-terminal & (chl4|517584 : 179.0) no description available & (reliability: 470.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45947 PE=3 SV=1)'" P '13.2.5.2' 'amino acid metabolism.degradation.serine-glycine-cysteine group.glycine' 'tr|b7s451|b7s451_phatc' "'(gnl|cdd|37981 : 398.0) no description available & (p93256|gcst_mescr : 348.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Mesembryanthemum crystallinum (Common ice plant) & (chl4|521364 : 341.0) no description available & (loc_os04g53230.1 : 338.0) no description available & (at1g11860 : 337.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (gnl|cdd|30753 : 332.0) no description available & (ipr006222 : 143.47363) Glycine cleavage T-protein, N-terminal & (reliability: 925.07886) & (original description: Aminomethyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GDCT PE=3 SV=1)'" P '13.2.6.2' 'amino acid metabolism.degradation.aromatic aa.tyrosine' 'tr|b7gdj9|b7gdj9_phatc' "'(gnl|cdd|38054 : 445.0) no description available & (at1g12050 : 364.0) fumarylacetoacetase, putative; FUNCTIONS IN: fumarylacetoacetase activity, catalytic activity; INVOLVED IN: aromatic amino acid family metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234), Fumarylacetoacetase, N-terminal (InterPro:IPR015377), Fumarylacetoacetase (InterPro:IPR005959); Has 4441 Blast hits to 4434 proteins in 1063 species: Archae - 139; Bacteria - 2814; Metazoa - 297; Fungi - 179; Plants - 60; Viruses - 0; Other Eukaryotes - 952 (source: NCBI BLink). & (loc_os02g10310.1 : 344.0) no description available & (chl4|517785 : 267.0) no description available & (ipr011234 : 216.9373) Fumarylacetoacetase, C-terminal-related & (gnl|cdd|79833 : 129.0) no description available & (reliability: 901.79645) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50281 PE=4 SV=1)'" P '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'tr|b7fx40|b7fx40_phatc' "'(gnl|cdd|36897 : 81.1) no description available & (gnl|cdd|75599 : 67.7) no description available & (at2g30650 : 46.6) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: petal, leaf whorl, sepal, flower, pedicel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: beta-hydroxyisobutyryl-CoA hydrolase 1 (TAIR:AT5G65940.1); Has 32067 Blast hits to 32054 proteins in 2254 species: Archae - 421; Bacteria - 21939; Metazoa - 1258; Fungi - 833; Plants - 620; Viruses - 0; Other Eukaryotes - 6996 (source: NCBI BLink). & (loc_os12g16350.13 : 42.4) no description available & (reliability: 93.2) & (original description: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45277 PE=3 SV=1)'" P '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'tr|b7fz92|b7fz92_phatc' "'(gnl|cdd|36605 : 476.0) no description available & (gnl|cdd|29411 : 469.0) no description available & (at5g47720 : 235.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (loc_os01g02020.1 : 228.0) no description available & (ipr020616 : 195.45737) Thiolase, N-terminal & (chl4|517584 : 179.0) no description available & (reliability: 470.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45947 PE=3 SV=1)'" P '13.2.6.3' 'amino acid metabolism.degradation.aromatic aa.tryptophan' 'tr|b7ge26|b7ge26_phatc' "'(gnl|cdd|75276 : 328.0) no description available & (gnl|cdd|36893 : 269.0) no description available & (loc_os02g43720.1 : 162.0) no description available & (at4g16800 : 158.0) ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink). & (chl4|518804 : 145.0) no description available & (ipr001753 : 122.10958) Crotonase, core & (q39659|mfpa_cucsa : 112.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (reliability: 316.0) & (original description: Hydratase enyol-coa hydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55192 PE=3 SV=1)'" P '13.99' 'amino acid metabolism.misc' 'tr|b7gd47|b7gd47_phatc' "'(chl4|516515 : 525.0) no description available & (gnl|cdd|83076 : 393.0) no description available & (loc_os04g57400.1 : 372.0) no description available & (gnl|cdd|36681 : 370.0) no description available & (at1g49820 : 367.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (ipr000649 : 153.24358) Initiation factor 2B-related & (reliability: 734.0) & (original description: Methylthioribose-1-phosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23811 PE=3 SV=1)'" P '14.1' 'S-assimilation.ATPS' 'tr|b7fxq3|b7fxq3_phatc' "'(gnl|cdd|39439 : 558.0) no description available & (at1g19920 : 376.0) encodes a chloroplast form of ATP sulfurylase; APS2; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2101 Blast hits to 2098 proteins in 651 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 508 (source: NCBI BLink). & (loc_os03g53230.1 : 348.0) no description available & (gnl|cdd|28806 : 313.0) no description available & (o49204|kaps_catro : 151.0) Adenylyl-sulfate kinase, chloroplast precursor (EC 2.7.1.25) (APS kinase) (Adenosine-5'-phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (ipr002650 : 145.71678) Sulphate adenylyltransferase & (chl4|516610 : 145.0) no description available & (reliability: 1007.0044) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19901 PE=4 SV=1)'" P '14.1' 'S-assimilation.ATPS' 'tr|b7ga44|b7ga44_phatc' "'(chl4|521580 : 517.0) no description available & (gnl|cdd|28806 : 393.0) no description available & (ipr002650 : 190.23909) Sulphate adenylyltransferase & (gnl|cdd|35855 : 177.0) no description available & (at3g22890 : 108.0) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.; ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink). & (loc_os03g53230.1 : 88.6) no description available & (reliability: 548.9184) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42282 PE=4 SV=1)'" P '14.2' 'S-assimilation.APR' 'tr|b5y5u2|b5y5u2_phatc' "'(at4g04610 : 76.6) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (gnl|cdd|48542 : 75.0) no description available & (chl4|513209 : 74.7) no description available & (loc_os07g32570.1 : 56.6) no description available & (gnl|cdd|35412 : 43.6) no description available & (p80284|pdi_horvu : 42.4) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) (Endosperm protein E-1) - Hordeum vulgare (Barley) & (ipr012335 : 41.775036) no description available & (reliability: 153.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10518 PE=4 SV=1)'" P '14.2' 'S-assimilation.APR' 'tr|b5y5u1|b5y5u1_phatc' "'(gnl|cdd|80937 : 148.0) no description available & (gnl|cdd|35410 : 127.0) no description available & (ipr014729 : 94.06952) Rossmann-like alpha/beta/alpha sandwich fold & (at4g21990 : 66.2) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.; APS reductase 3 (APR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500); BEST Arabidopsis thaliana protein match is: APS reductase 1 (TAIR:AT4G04610.1). & (loc_os07g32570.1 : 62.4) no description available & (chl4|513209 : 49.3) no description available & (reliability: 132.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25956 PE=4 SV=1)'" P '14.3' 'S-assimilation.sulfite redox' 'tr|b7frm6|b7frm6_phatc' "'(at5g04590 : 549.0) A.thaliana gene encoding sulfite reductase.; sulfite reductase (SIR); FUNCTIONS IN: sulfite reductase activity, sulfite reductase (ferredoxin) activity, copper ion binding; INVOLVED IN: sulfate reduction, response to salt stress, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sulphite reductase, ferredoxin dependent (InterPro:IPR011787), Nitrite/sulphite reductase iron-sulphur/siroheam-binding site (InterPro:IPR006066), Nitrite/sulphite reductase 4Fe-4S domain (InterPro:IPR006067), Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like (InterPro:IPR005117); BEST Arabidopsis thaliana protein match is: nitrite reductase 1 (TAIR:AT2G15620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os05g42350.1 : 538.0) no description available & (gnl|cdd|35780 : 505.0) no description available & (gnl|cdd|30504 : 390.0) no description available & (chl4|516945 : 323.0) no description available & (p05314|nir_spiol : 84.3) Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1) - Spinacia oleracea (Spinach) & (ipr006067 : 79.25548) Nitrite/sulphite reductase 4Fe-4S domain & (reliability: 1098.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24374 PE=4 SV=1)'" P '14.5' 'S-assimilation.sulfite oxidase' 'tr|b7fu98|b7fu98_phatc' "'(gnl|cdd|29406 : 335.0) no description available & (gnl|cdd|35755 : 333.0) no description available & (chl4|521708 : 317.0) no description available & (at3g01910 : 240.0) Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.; sulfite oxidase (SOX); FUNCTIONS IN: sulfite oxidase activity; INVOLVED IN: sulfur metabolic process, response to sulfur dioxide, chlorophyll metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Eukaryotic molybdopterin oxidoreductase (InterPro:IPR008335), Moybdenum cofactor oxidoreductase, dimerisation (InterPro:IPR005066), Oxidoreductase, molybdopterin-binding domain (InterPro:IPR000572); BEST Arabidopsis thaliana protein match is: nitrate reductase 1 (TAIR:AT1G77760.1); Has 3266 Blast hits to 3265 proteins in 737 species: Archae - 124; Bacteria - 1570; Metazoa - 141; Fungi - 268; Plants - 245; Viruses - 0; Other Eukaryotes - 918 (source: NCBI BLink). & (loc_os08g41830.1 : 236.0) no description available & (p27968|nia7_horvu : 191.0) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) - Hordeum vulgare (Barley) & (ipr000572 : 154.98656) Oxidoreductase, molybdopterin-binding domain & (reliability: 480.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44482 PE=4 SV=1)'" P '15.2' "'metal handling.binding, chelation and storage'" 'tr|b7gcl1|b7gcl1_phatc' "'(gnl|cdd|35851 : 86.3) no description available & (ipr007719 : 82.89307) Phytochelatin synthase & (loc_os05g34290.1 : 73.6) no description available & (at1g03980 : 73.2) Encodes a protein with phytochelatin synthase activity which binds Cd2+ and Cd-glutathione complexes with high affinity. The protein has been postulated to be involved in Cd2+ tolerance. AtPCS2 expression appears to be less than that of AtPCS1, explaining the inability of endogenous AtPCS2 to substitute for AtPCS1 in the cad1-3 mutant (AtPCS1 null).; phytochelatin synthase 2 (PCS2); CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 1 (PCS1) (TAIR:AT5G44070.1); Has 342 Blast hits to 342 proteins in 145 species: Archae - 0; Bacteria - 138; Metazoa - 36; Fungi - 7; Plants - 117; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (chl4|524337 : 62.8) no description available & (gnl|cdd|68592 : 50.0) no description available & (reliability: 291.46286) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50006 PE=4 SV=1)'" P '15.2' "'metal handling.binding, chelation and storage'" 'tr|b7s466|b7s466_phatc' "'(gnl|cdd|36719 : 629.0) no description available & (gnl|cdd|81480 : 606.0) no description available & (p93438|metl_orysa : 517.0) S-adenosylmethionine synthetase 2 (EC 2.5.1.6) (Methionine adenosyltransferase 2) (AdoMet synthetase 2) - Oryza sativa (Rice) & (loc_os01g22010.3 : 517.0) no description available & (chl4|522823 : 516.0) no description available & (at3g17390 : 508.0) S-adenosylmethionine synthetase; METHIONINE OVER-ACCUMULATOR 3 (MTO3); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: lignin biosynthetic process, response to cold, methionine metabolic process, S-adenosylmethionine biosynthetic process; LOCATED IN: nucleolus, cell wall, plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10856 Blast hits to 10849 proteins in 2868 species: Archae - 12; Bacteria - 5440; Metazoa - 373; Fungi - 167; Plants - 707; Viruses - 1; Other Eukaryotes - 4156 (source: NCBI BLink). & (ipr022630 : 149.78456) S-adenosylmethionine synthetase, C-terminal & (reliability: 1016.0) & (original description: S-adenosylmethionine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd913 PE=3 SV=1)'" P '16.1.1' 'secondary metabolism.isoprenoids.non-mevalonate pathway' 'tr|b7fp19|b7fp19_phatc' "'(chl4|511675 : 514.0) no description available & (at1g74470 : 508.0) Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.; Pyridine nucleotide-disulphide oxidoreductase family protein; FUNCTIONS IN: geranylgeranyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Geranylgeranyl reductase (InterPro:IPR010253), Geranylgeranyl reductase, plant/cyanobacteria (InterPro:IPR011774), Geranylgeranyl reductase, plant/prokaryotic (InterPro:IPR011777); Has 4540 Blast hits to 4539 proteins in 1185 species: Archae - 562; Bacteria - 2644; Metazoa - 5; Fungi - 25; Plants - 302; Viruses - 0; Other Eukaryotes - 1002 (source: NCBI BLink). & (loc_os02g51080.1 : 506.0) no description available & (gnl|cdd|30989 : 169.0) no description available & (gnl|cdd|37825 : 51.9) no description available & (reliability: 1016.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50650 PE=4 SV=1)'" P '16.1.1.10' 'secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase' 'tr|b7fu89|b7fu89_phatc' "'(p80042|ggpps_capan : 280.0) Geranylgeranyl pyrophosphate synthetase, chloroplast precursor (GGPP synthetase) (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] - Capsicum an & (chl4|512501 : 267.0) no description available & (gnl|cdd|35995 : 265.0) no description available & (at4g36810 : 258.0) Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.; geranylgeranyl pyrophosphate synthase 1 (GGPS1); FUNCTIONS IN: farnesyltranstransferase activity; INVOLVED IN: isoprenoid biosynthetic process; LOCATED IN: etioplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: Terpenoid synthases superfamily protein (TAIR:AT2G18620.1); Has 16617 Blast hits to 16612 proteins in 2936 species: Archae - 341; Bacteria - 9385; Metazoa - 291; Fungi - 423; Plants - 452; Viruses - 12; Other Eukaryotes - 5713 (source: NCBI BLink). & (gnl|cdd|30491 : 239.0) no description available & (ipr008949 : 229.72787) Terpenoid synthase & (loc_os07g39270.2 : 220.0) no description available & (reliability: 516.0) & (original description: Farnesyltranstransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19000 PE=3 SV=1)'" P '16.1.1.6' 'secondary metabolism.isoprenoids.non-mevalonate pathway.HDS' 'tr|b7fv10|b7fv10_phatc' "'(chl4|512641 : 762.0) no description available & (loc_os02g39160.1 : 734.0) no description available & (at5g60600 : 731.0) Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase (HDS); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 4 iron, 4 sulfur cluster binding; INVOLVED IN: response to light stimulus, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, atypical (InterPro:IPR017178), 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type (InterPro:IPR004588); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr004588 : 331.75858) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type & (gnl|cdd|73758 : 325.0) no description available & (reliability: 2042.5775) & (original description: 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HDS PE=3 SV=1)'" P '16.1.2.1' 'secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase' 'tr|b7fz92|b7fz92_phatc' "'(gnl|cdd|36605 : 476.0) no description available & (gnl|cdd|29411 : 469.0) no description available & (at5g47720 : 235.0) Thiolase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, acetyl-CoA C-acetyltransferase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039); BEST Arabidopsis thaliana protein match is: acetoacetyl-CoA thiolase 2 (TAIR:AT5G48230.2); Has 23291 Blast hits to 23276 proteins in 2315 species: Archae - 454; Bacteria - 14875; Metazoa - 988; Fungi - 698; Plants - 252; Viruses - 0; Other Eukaryotes - 6024 (source: NCBI BLink). & (loc_os01g02020.1 : 228.0) no description available & (ipr020616 : 195.45737) Thiolase, N-terminal & (chl4|517584 : 179.0) no description available & (reliability: 470.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45947 PE=3 SV=1)'" P '16.1.2.6' 'secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase' 'tr|b7s422|b7s422_phatc' "'(gnl|cdd|38044 : 411.0) no description available & (loc_os02g01920.1 : 303.0) no description available & (at2g38700 : 298.0) Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.; mevalonate diphosphate decarboxylase 1 (MVD1); CONTAINS InterPro DOMAIN/s: Diphosphomevalonate decarboxylase (InterPro:IPR005935), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT3G54250.1); Has 1516 Blast hits to 1513 proteins in 678 species: Archae - 56; Bacteria - 877; Metazoa - 121; Fungi - 149; Plants - 60; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). & (gnl|cdd|33213 : 262.0) no description available & (ipr014721 : 137.81863) Ribosomal protein S5 domain 2-type fold, subgroup & (reliability: 596.0) & (original description: Diphosphomevalonate decarboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=MPDC PE=3 SV=1)'" P '16.1.2.7' 'secondary metabolism.isoprenoids.mevalonate pathway.isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase' 'tr|b7g0x8|b7g0x8_phatc' "'(gnl|cdd|35364 : 204.0) no description available & (chl4|522299 : 191.0) no description available & (gnl|cdd|72881 : 189.0) no description available & (loc_os05g34180.1 : 165.0) no description available & (at5g16440 : 158.0) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.; isopentenyl diphosphate isomerase 1 (IPP1); FUNCTIONS IN: isopentenyl-diphosphate delta-isomerase activity; INVOLVED IN: chlorophyll biosynthetic process, isoprenoid biosynthetic process, isopentenyl diphosphate biosynthetic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086), Isopentenyl-diphosphate delta-isomerase, type 1 (InterPro:IPR011876); BEST Arabidopsis thaliana protein match is: isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 (TAIR:AT3G02780.1); Has 2226 Blast hits to 2225 proteins in 801 species: Archae - 35; Bacteria - 1199; Metazoa - 210; Fungi - 137; Plants - 180; Viruses - 0; Other Eukaryotes - 465 (source: NCBI BLink). & (ipr000086 : 114.387314) NUDIX hydrolase domain & (reliability: 316.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12972 PE=4 SV=1)'" P '16.1.2.9' 'secondary metabolism.isoprenoids.mevalonate pathway.farnesyl pyrophosphate synthetase' 'tr|b7ga81|b7ga81_phatc' "'(gnl|cdd|35930 : 372.0) no description available & (chl4|521660 : 337.0) no description available & (loc_os01g50760.1 : 318.0) no description available & (p49353|fpps_maize : 315.0) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] - Zea mays (Maize) & (at4g17190 : 299.0) Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.; farnesyl diphosphate synthase 2 (FPS2); CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: farnesyl diphosphate synthase 1 (TAIR:AT5G47770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr008949 : 240.98297) Terpenoid synthase & (gnl|cdd|84711 : 214.0) no description available & (reliability: 598.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49325 PE=3 SV=1)'" P '16.1.3.5' 'secondary metabolism.isoprenoids.tocopherol biosynthesis.tocopherol methyltransferase' 'tr|b5y5j4|b5y5j4_phatc' "'(chl4|515475 : 406.0) no description available & (loc_os02g47310.1 : 171.0) no description available & (at1g64970 : 158.0) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves; gamma-tocopherol methyltransferase (G-TMT); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73600.1); Has 14618 Blast hits to 14609 proteins in 2288 species: Archae - 408; Bacteria - 10917; Metazoa - 203; Fungi - 466; Plants - 497; Viruses - 0; Other Eukaryotes - 2127 (source: NCBI BLink). & (gnl|cdd|87468 : 98.5) no description available & (q6zix2|smt1_orysa : 95.1) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (gnl|cdd|36483 : 94.7) no description available & (ipr013216 : 47.712433) Methyltransferase type 11 & (reliability: 316.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_33530 PE=3 SV=1)'" P '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'tr|b7fwy8|b7fwy8_phatc' "'(chl4|516552 : 416.0) no description available & (at1g57770 : 405.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (loc_os03g62510.1 : 385.0) no description available & (gnl|cdd|39455 : 284.0) no description available & (gnl|cdd|31426 : 217.0) no description available & (q2vex9|crtso_dauca : 166.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 810.0) & (original description: Carotenoid isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CRTISO4 PE=4 SV=1)'" P '16.1.4' 'secondary metabolism.isoprenoids.carotenoids' 'tr|b7fqf7|b7fqf7_phatc' "'(at1g57770 : 322.0) FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: carotenoid isomerase (TAIR:AT1G06820.1); Has 6263 Blast hits to 6155 proteins in 967 species: Archae - 159; Bacteria - 2901; Metazoa - 394; Fungi - 76; Plants - 350; Viruses - 0; Other Eukaryotes - 2383 (source: NCBI BLink). & (loc_os03g62510.1 : 298.0) no description available & (chl4|516552 : 292.0) no description available & (gnl|cdd|39455 : 241.0) no description available & (gnl|cdd|31426 : 192.0) no description available & (q2vex9|crtso_dauca : 132.0) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 644.0) & (original description: CRTISO5 carotenoid isomerase 5,phytoene dehydrogenase-related protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CRTISO5 PE=4 SV=1)'" P '16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'tr|b7fzl9|b7fzl9_phatc' "'(chl4|513052 : 616.0) no description available & (p80093|crti_capan : 584.0) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (at4g14210 : 582.0) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g08570.1 : 561.0) no description available & (gnl|cdd|33157 : 358.0) no description available & (gnl|cdd|35252 : 214.0) no description available & (ipr002937 : 159.84596) Amine oxidase & (reliability: 1164.0) & (original description: Amine oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDS1 PE=3 SV=1)'" P '16.1.4.2' 'secondary metabolism.isoprenoids.carotenoids.phytoene dehydrogenase' 'tr|b5y509|b5y509_phatc' "'(chl4|514693 : 304.0) no description available & (gnl|cdd|33157 : 125.0) no description available & (loc_os04g47290.3 : 96.7) no description available & (p80093|crti_capan : 48.1) Phytoene dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase) - Capsicum annuum (Bell pepper) & (gnl|cdd|35252 : 40.0) no description available & (at4g14210 : 37.7) Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.; phytoene desaturase 3 (PDS3); FUNCTIONS IN: phytoene dehydrogenase activity; INVOLVED IN: carotenoid biosynthetic process, carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Phytoene desaturase (InterPro:IPR014102); BEST Arabidopsis thaliana protein match is: zeta-carotene desaturase (TAIR:AT3G04870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 75.4) & (original description: PDS-like 1, phytoene desaturase-like protein, phytoene dehydrogenase-like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDS-like1 PE=4 SV=1)'" P '16.1.4.21' 'secondary metabolism.isoprenoids.carotenoids.violaxanthin de-epoxidase' 'tr|b7fur6|b7fur6_phatc' "'(loc_os04g31040.1 : 305.0) no description available & (at1g08550 : 304.0) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex; non-photochemical quenching 1 (NPQ1); FUNCTIONS IN: violaxanthin de-epoxidase activity; INVOLVED IN: fatty acid metabolic process, response to heat, chlorophyll metabolic process, xanthophyll metabolic process, xanthophyll cycle; LOCATED IN: chloroplast thylakoid lumen, chloroplast photosystem II, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Violaxanthin de-epoxidase (InterPro:IPR010788), Calycin-like (InterPro:IPR011038); BEST Arabidopsis thaliana protein match is: violaxanthin de-epoxidase-related (TAIR:AT2G21860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|70594 : 235.0) no description available & (ipr010788 : 151.70825) Violaxanthin de-epoxidase & (chl4|519468 : 48.9) no description available & (reliability: 608.0) & (original description: Violaxanthin deepoxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=VDE PE=4 SV=1)'" P '16.1.4.3' 'secondary metabolism.isoprenoids.carotenoids.zeta-carotene desaturase' 'tr|b7fpc4|b7fpc4_phatc' "'(loc_os07g10490.1 : 543.0) no description available & (q9ztp4|zds_maize : 539.0) Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) (Carotene 7,8-desaturase) - Zea mays (Maize) & (chl4|524221 : 515.0) no description available & (at3g04870 : 499.0) Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.; zeta-carotene desaturase (ZDS); FUNCTIONS IN: carotene 7,8-desaturase activity; INVOLVED IN: carotene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Carotene 7,8-desaturase (InterPro:IPR014103); BEST Arabidopsis thaliana protein match is: phytoene desaturase 3 (TAIR:AT4G14210.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|33157 : 395.0) no description available & (gnl|cdd|35252 : 167.0) no description available & (ipr002937 : 119.39795) Amine oxidase & (reliability: 998.0) & (original description: Zeta-carotene desaturase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ZDS PE=4 SV=1)'" P '16.2.1.10' 'secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD' 'tr|b7ga85|b7ga85_phatc' "'(gnl|cdd|31264 : 290.0) no description available & (gnl|cdd|35246 : 274.0) no description available & (chl4|515460 : 233.0) no description available & (p93257|mtdh_mescr : 206.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g37970 : 191.0) cinnamyl alcohol dehydrogenase 6 (CAD6); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 9 (TAIR:AT4G39330.1); Has 35385 Blast hits to 35371 proteins in 2946 species: Archae - 789; Bacteria - 23408; Metazoa - 1218; Fungi - 2700; Plants - 2633; Viruses - 3; Other Eukaryotes - 4634 (source: NCBI BLink). & (loc_os10g29470.1 : 191.0) no description available & (ipr013154 : 48.017815) Alcohol dehydrogenase GroES-like & (reliability: 382.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30246 PE=3 SV=1)'" P '16.4.1' 'secondary metabolism.N misc.alkaloid-like' 'tr|b7fu94|b7fu94_phatc' "'(gnl|cdd|36733 : 143.0) no description available & (chl4|513878 : 123.0) no description available & (at3g59530 : 100.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g15710.1 : 96.3) no description available & (ipr011042 : 77.12474) Six-bladed beta-propeller, TolB-like & (gnl|cdd|66743 : 72.3) no description available & (p18417|stsy_catro : 55.8) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 200.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44479 PE=4 SV=1)'" P '16.4.2.1' 'secondary metabolism.N misc.betaine.betaine-aldehyde dehydrogenase' 'tr|b7fnt8|b7fnt8_phatc' "'(ipr015590 : 1500.0) Aldehyde dehydrogenase domain & (gnl|cdd|84580 : 433.0) no description available & (gnl|cdd|37661 : 317.0) no description available & (at1g74920 : 270.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (p17202|badh_spiol : 263.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (loc_os08g32870.1 : 254.0) no description available & (chl4|525683 : 222.0) no description available & (reliability: 540.0) & (original description: Succinate semialdehyde dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SSDH PE=3 SV=1)'" P '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'tr|b7g3q9|b7g3q9_phatc' "'(gnl|cdd|29568 : 232.0) no description available & (gnl|cdd|36193 : 225.0) no description available & (at1g50110 : 178.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT1G50090.1); Has 12195 Blast hits to 12195 proteins in 2532 species: Archae - 155; Bacteria - 7654; Metazoa - 266; Fungi - 412; Plants - 250; Viruses - 0; Other Eukaryotes - 3458 (source: NCBI BLink). & (loc_os05g48450.6 : 176.0) no description available & (chl4|522677 : 148.0) no description available & (reliability: 338.0) & (original description: Branched-chain-amino-acid aminotransferase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28585 PE=3 SV=1)'" P '16.5.1.1.1.1' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.branched-chain amino acid aminotransferase (BCAT/MAAT)' 'tr|b7ft57|b7ft57_phatc' "'(gnl|cdd|36193 : 369.0) no description available & (gnl|cdd|29568 : 325.0) no description available & (loc_os05g48450.6 : 213.0) no description available & (at5g65780 : 207.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (chl4|522677 : 170.0) no description available & (ipr001544 : 52.777134) Aminotransferase, class IV & (reliability: 400.0) & (original description: Branched-chain-amino-acid aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43697 PE=3 SV=1)'" P '16.5.1.1.1.3' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate isomerase large subunit (MAM-IL)' 'tr|b7fur4|b7fur4_phatc' "'(gnl|cdd|82876 : 1504.0) no description available & (ipr015928 : 236.7608) Aconitase/3-isopropylmalate dehydratase, swivel & (gnl|cdd|35674 : 89.7) no description available & (at4g13430 : 72.4) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g03260.2 : 66.6) no description available & (chl4|510692 : 64.3) no description available & (q6yzx6|acoc_orysa : 47.4) Putative aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Oryza sativa (Rice) & (reliability: 144.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26290 PE=4 SV=1)'" P '16.5.1.1.1.5' 'secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.methylthioalkylmalate dehydrogenase (MAM-D)' 'tr|b7g1x8|b7g1x8_phatc' "'(ipr001804 : 1500.0) Isocitrate and isopropylmalate dehydrogenases family & (gnl|cdd|80743 : 536.0) no description available & (gnl|cdd|36005 : 421.0) no description available & (loc_os03g45320.1 : 410.0) no description available & (at1g31180 : 407.0) The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 3 (IMD3); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, response to salt stress, metabolic process; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, plastid; EXPRESSED IN: fruit, root, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 1 (TAIR:AT5G14200.1); Has 15253 Blast hits to 15253 proteins in 2616 species: Archae - 395; Bacteria - 8280; Metazoa - 576; Fungi - 831; Plants - 243; Viruses - 0; Other Eukaryotes - 4928 (source: NCBI BLink). & (p29102|leu3_brana : 405.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (chl4|524462 : 387.0) no description available & (reliability: 814.0) & (original description: 3-isopropylmalate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=IPMDH PE=3 SV=1)'" P '16.5.1.3.2.1' 'secondary metabolism.sulfur-containing.glucosinolates.degradation.nitrilespecifier protein.epithiospecifier protein' 'tr|b7gc67|b7gc67_phatc' "'(ipr015915 : 129.81227) Kelch-type beta propeller & (gnl|cdd|39642 : 106.0) no description available & (chl4|521335 : 44.3) no description available & (gnl|cdd|85395 : 40.7) no description available & (at1g67480 : 38.9) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (loc_os05g07220.1 : 38.5) no description available & (reliability: 73.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49881 PE=4 SV=1)'" P '16.7' 'secondary metabolism.wax' 'tr|b7fsq7|b7fsq7_phatc' "'(gnl|cdd|36232 : 269.0) no description available & (at1g67730 : 256.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (loc_os04g40730.1 : 243.0) no description available & (gnl|cdd|30648 : 165.0) no description available & (ipr016040 : 121.343864) NAD(P)-binding domain & (chl4|512755 : 86.7) no description available & (q08632|sdr1_picab : 70.9) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (reliability: 512.0) & (original description: Short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25360 PE=3 SV=1)'" P '16.8.2' 'secondary metabolism.flavonoids.chalcones' 'tr|b7g763|b7g763_phatc' "'(at1g53520 : 57.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (chl4|510757 : 42.4) no description available & (p28013|cfi2_medsa : 38.1) Chalcone--flavonone isomerase 2 (EC 5.5.1.6) (Chalcone isomerase 2) (Fragment) - Medicago sativa (Alfalfa) & (loc_os07g38390.1 : 37.7) no description available & (gnl|cdd|66148 : 36.5) no description available & (reliability: 114.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48449 PE=4 SV=1)'" P '16.99' 'secondary metabolism.unspecified' 'tr|b7ftp5|b7ftp5_phatc' "'(gnl|cdd|82590 : 211.0) no description available & (ipr003462 : 112.238884) Ornithine cyclodeaminase/mu-crystallin & (gnl|cdd|38217 : 79.7) no description available & (at5g52810 : 61.6) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os10g38930.1 : 55.5) no description available & (reliability: 123.2) & (original description: Ornithine cyclodeaminase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54222 PE=4 SV=1)'" P '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'tr|b7ft25|b7ft25_phatc' '(gnl|cdd|36936 : 133.0) no description available & (gnl|cdd|86250 : 106.0) no description available & (chl4|521017 : 96.7) no description available & (q07764|hva22_horvu : 89.4) Protein HVA22 - Hordeum vulgare (Barley) & (loc_os11g30500.1 : 88.6) no description available & (at4g36720 : 84.3) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (ipr004345 : 68.33562) TB2/DP1/HVA22-related protein & (reliability: 160.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43671 PE=3 SV=1)' P '17.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation' 'tr|b7g054|b7g054_phatc' "'(gnl|cdd|36936 : 98.9) no description available & (chl4|521017 : 87.8) no description available & (gnl|cdd|86250 : 83.0) no description available & (loc_os11g38920.1 : 77.4) no description available & (at2g36020 : 69.3) HVA22-like protein J (HVA22J); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: Abscisic acid-responsive (TB2/DP1, HVA22) family protein (TAIR:AT5G42560.1); Has 1423 Blast hits to 1423 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 697; Fungi - 144; Plants - 486; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (ipr004345 : 62.169796) TB2/DP1/HVA22-related protein & (q07764|hva22_horvu : 61.6) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 138.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46126 PE=3 SV=1)'" P '17.1.1.1.1' 'hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase' 'tr|b7fur7|b7fur7_phatc' "'(at5g67030 : 284.0) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.; ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6741 Blast hits to 6737 proteins in 1083 species: Archae - 12; Bacteria - 3697; Metazoa - 0; Fungi - 1597; Plants - 576; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (loc_os04g37619.2 : 277.0) no description available & (q40412|aba2_nicpl : 265.0) Zeaxanthin epoxidase, chloroplast precursor (EC 1.14.13.90) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (chl4|518602 : 258.0) no description available & (gnl|cdd|37825 : 182.0) no description available & (gnl|cdd|82506 : 143.0) no description available & (reliability: 568.0) & (original description: Zeaxanthin epoxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ZEP3 PE=4 SV=1)'" P '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'tr|b7ft25|b7ft25_phatc' '(gnl|cdd|36936 : 133.0) no description available & (gnl|cdd|86250 : 106.0) no description available & (chl4|521017 : 96.7) no description available & (q07764|hva22_horvu : 89.4) Protein HVA22 - Hordeum vulgare (Barley) & (loc_os11g30500.1 : 88.6) no description available & (at4g36720 : 84.3) HVA22-like protein K (HVA22K); CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue B (TAIR:AT5G62490.1); Has 1515 Blast hits to 1515 proteins in 211 species: Archae - 0; Bacteria - 0; Metazoa - 701; Fungi - 226; Plants - 493; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (ipr004345 : 68.33562) TB2/DP1/HVA22-related protein & (reliability: 168.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43671 PE=3 SV=1)' P '17.1.3' 'hormone metabolism.abscisic acid.induced-regulated-responsive-activated' 'tr|b7g054|b7g054_phatc' "'(gnl|cdd|36936 : 98.9) no description available & (chl4|521017 : 87.8) no description available & (gnl|cdd|86250 : 83.0) no description available & (loc_os11g38920.1 : 77.4) no description available & (at2g36020 : 69.3) HVA22-like protein J (HVA22J); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: Abscisic acid-responsive (TB2/DP1, HVA22) family protein (TAIR:AT5G42560.1); Has 1423 Blast hits to 1423 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 697; Fungi - 144; Plants - 486; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink). & (ipr004345 : 62.169796) TB2/DP1/HVA22-related protein & (q07764|hva22_horvu : 61.6) Protein HVA22 - Hordeum vulgare (Barley) & (reliability: 131.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46126 PE=3 SV=1)'" P '17.2.2' 'hormone metabolism.auxin.signal transduction' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '17.2.2' 'hormone metabolism.auxin.signal transduction' 'tr|b7fxk1|b7fxk1_phatc' "'(at5g07120 : 78.6) Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.; sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37484 : 74.8) no description available & (gnl|cdd|85027 : 67.0) no description available & (chl4|510496 : 63.9) no description available & (loc_os01g64280.1 : 50.4) no description available & (ipr001683 : 37.63987) Phox homologous domain & (reliability: 157.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45401 PE=4 SV=1)'" P '17.2.3' 'hormone metabolism.auxin.induced-regulated-responsive-activated' 'tr|b7fug6|b7fug6_phatc' "'(gnl|cdd|31011 : 193.0) no description available & (loc_os10g28320.1 : 193.0) no description available & (at1g60680 : 183.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 31100 Blast hits to 31077 proteins in 2588 species: Archae - 657; Bacteria - 20302; Metazoa - 1863; Fungi - 2395; Plants - 1353; Viruses - 0; Other Eukaryotes - 4530 (source: NCBI BLink). & (gnl|cdd|36788 : 179.0) no description available & (p40691|a115_tobac : 173.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (ipr023210 : 152.32729) NADP-dependent oxidoreductase domain & (chl4|518106 : 134.0) no description available & (reliability: 366.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44546 PE=4 SV=1)'" P '17.3.1.1.1' 'hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DET2' 'tr|b7g1m2|b7g1m2_phatc' "'(at5g16010 : 118.0) 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT3G55360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g06800.1 : 103.0) no description available & (gnl|cdd|36851 : 102.0) no description available & (gnl|cdd|66254 : 63.0) no description available & (chl4|515272 : 48.1) no description available & (reliability: 236.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28009 PE=4 SV=1)'" P '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'tr|b7fu36|b7fu36_phatc' "'(q6zix2|smt1_orysa : 315.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (loc_os07g10600.1 : 315.0) no description available & (at5g13710 : 304.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (chl4|512854 : 231.0) no description available & (gnl|cdd|36483 : 187.0) no description available & (gnl|cdd|71926 : 126.0) no description available & (reliability: 608.0) & (original description: Methyltransferase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10824 PE=3 SV=1)'" P '17.3.1.2.2' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT2' 'tr|b7fz54|b7fz54_phatc' "'(gnl|cdd|87468 : 72.6) no description available & (gnl|cdd|37572 : 55.7) no description available & (chl4|515475 : 54.3) no description available & (o82427|smt2_orysa : 53.1) 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol C-methyltransferase 2) (Sterol-C-methyltransferase 2) - Oryza sativa (Rice) & (loc_os03g04340.1 : 53.1) no description available & (at5g13710 : 50.1) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (reliability: 100.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12280 PE=4 SV=1)'" P '17.3.1.2.3' 'hormone metabolism.brassinosteroid.synthesis-degradation.sterols.CYP51' 'tr|b7gej8|b7gej8_phatc' "'(chl4|518815 : 391.0) no description available & (gnl|cdd|35903 : 383.0) no description available & (at1g11680 : 381.0) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.; CYTOCHROME P450 51G1 (CYP51G1); FUNCTIONS IN: sterol 14-demethylase activity, oxygen binding; INVOLVED IN: sterol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 707, subfamily A, polypeptide 4 (TAIR:AT3G19270.1); Has 30265 Blast hits to 30215 proteins in 1662 species: Archae - 71; Bacteria - 5605; Metazoa - 9913; Fungi - 5125; Plants - 8048; Viruses - 6; Other Eukaryotes - 1497 (source: NCBI BLink). & (p93846|cp51_sorbi : 372.0) Cytochrome P450 51 (EC 1.14.13.70) (CYPLI) (P450-LIA1) (Obtusifoliol 14-alpha demethylase) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (loc_os11g32240.1 : 347.0) no description available & (ipr001128 : 221.96446) Cytochrome P450 & (gnl|cdd|84486 : 191.0) no description available & (reliability: 762.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31339 PE=3 SV=1)'" P '17.3.2.99' 'hormone metabolism.brassinosteroid.signal transduction.other' 'tr|b7g8w6|b7g8w6_phatc' "'(gnl|cdd|35862 : 347.0) no description available & (chl4|521378 : 281.0) no description available & (loc_os08g21660.1 : 274.0) no description available & (at2g46290 : 263.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|29257 : 138.0) no description available & (ipr015943 : 115.514915) WD40/YVTN repeat-like-containing domain & (p93107|pf20_chlre : 60.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 508.0) & (original description: Eukaryotic translation initiation factor 3 subunit I OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39526 PE=3 SV=1)'" P '17.5.1.1' 'hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase' 'tr|b7fwv4|b7fwv4_phatc' "'(gnl|cdd|35477 : 257.0) no description available & (at4g08040 : 213.0) encodes an aminotransferase that belongs to ACC synthase gene family structurally; 1-aminocyclopropane-1-carboxylate synthase 11 (ACS11); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity; INVOLVED IN: ethylene biosynthetic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, petiole, leaf; EXPRESSED DURING: LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q00257|1a12_cucma : 198.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (loc_os03g51740.1 : 192.0) no description available & (chl4|524025 : 162.0) no description available & (gnl|cdd|84568 : 143.0) no description available & (ipr015421 : 108.7158) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 426.0) & (original description: 1-aminocyclopropane-1-carboxylate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19699 PE=4 SV=1)'" P '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'tr|b7g4k1|b7g4k1_phatc' "'(at2g42680 : 88.2) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.; multiprotein bridging factor 1A (MBF1A); CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729), Helix-turn-helix type 3 (InterPro:IPR001387); BEST Arabidopsis thaliana protein match is: multiprotein bridging factor 1B (TAIR:AT3G58680.1); Has 672 Blast hits to 672 proteins in 252 species: Archae - 42; Bacteria - 8; Metazoa - 193; Fungi - 147; Plants - 135; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink). & (loc_os08g27850.1 : 85.9) no description available & (gnl|cdd|38608 : 82.4) no description available & (chl4|519165 : 75.5) no description available & (gnl|cdd|31998 : 53.1) no description available & (reliability: 176.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14374 PE=4 SV=1)'" P '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'tr|b7fqs8|b7fqs8_phatc' "'(chl4|511190 : 557.0) no description available & (loc_os01g10050.1 : 530.0) no description available & (at1g55150 : 529.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 529.0) no description available & (p46942|db10_nicsy : 409.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 396.0) no description available & (ipr011545 : 106.15464) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1058.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17862 PE=3 SV=1)'" P '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '17.5.3' 'hormone metabolism.ethylene.induced-regulated-responsive-activated' 'tr|b7s475|b7s475_phatc' "'(gnl|cdd|35552 : 479.0) no description available & (loc_os01g36860.1 : 411.0) no description available & (at5g14610 : 410.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (p46942|db10_nicsy : 399.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (chl4|511190 : 390.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (ipr011545 : 100.72596) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 774.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd920 PE=3 SV=1)'" P '17.7.1.5' 'hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase' 'tr|b7fzj4|b7fzj4_phatc' "'(gnl|cdd|73381 : 433.0) no description available & (ipr013785 : 254.71147) Aldolase-type TIM barrel & (at1g76680 : 229.0) Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 1 (OPR1); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, developing seed stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os06g11290.1 : 224.0) no description available & (gnl|cdd|35356 : 217.0) no description available & (chl4|518293 : 215.0) no description available & (reliability: 458.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50914 PE=4 SV=1)'" P '17.7.3' 'hormone metabolism.jasmonate.induced-regulated-responsive-activated' 'tr|b7gc67|b7gc67_phatc' "'(ipr015915 : 129.81227) Kelch-type beta propeller & (gnl|cdd|39642 : 106.0) no description available & (chl4|521335 : 44.3) no description available & (gnl|cdd|85395 : 40.7) no description available & (at1g67480 : 38.9) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (loc_os05g07220.1 : 38.5) no description available & (reliability: 73.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49881 PE=4 SV=1)'" P '18' 'Co-factor and vitamine metabolism' 'tr|b7g8h7|b7g8h7_phatc' "'(gnl|cdd|81311 : 489.0) no description available & (gnl|cdd|36819 : 428.0) no description available & (q9at63|pdx1_ginbi : 353.0) Pyridoxin biosynthesis protein PDX1 (Sor-like protein) - Ginkgo biloba (Ginkgo) & (chl4|515880 : 350.0) no description available & (at5g01410 : 344.0) Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.; REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os11g48080.1 : 342.0) no description available & (ipr001852 : 248.03734) Vitamin B6 biosynthesis protein & (reliability: 688.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29885 PE=3 SV=1)'" P '18.13' 'Co-factor and vitamine metabolism.isochorismatase' 'tr|b7fuz0|b7fuz0_phatc' '(chl4|510207 : 320.0) no description available & (ipr000868 : 155.988) Isochorismatase-like & (gnl|cdd|29548 : 152.0) no description available & (at3g16190 : 59.3) Isochorismatase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isochorismatase-like (InterPro:IPR000868); BEST Arabidopsis thaliana protein match is: nicotinamidase 2 (TAIR:AT5G23230.1); Has 6935 Blast hits to 6933 proteins in 1622 species: Archae - 156; Bacteria - 6040; Metazoa - 0; Fungi - 183; Plants - 97; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink). & (loc_os02g17640.1 : 59.3) no description available & (gnl|cdd|39206 : 56.6) no description available & (reliability: 118.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26363 PE=4 SV=1)' P '18.2' 'Co-factor and vitamine metabolism.thiamine' 'tr|b7g4w8|b7g4w8_phatc' '(ipr002817 : 1500.0) Thiamine biosynthesis protein ThiC & (at2g29630 : 843.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (loc_os03g47610.8 : 835.0) no description available & (gnl|cdd|82913 : 765.0) no description available & (chl4|522572 : 715.0) no description available & (reliability: 1686.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38085 PE=3 SV=1)' P '18.3.1' 'Co-factor and vitamine metabolism.riboflavin.GTP cyclohydrolase II' 'tr|b7fny5|b7fny5_phatc' "'(gnl|cdd|82147 : 600.0) no description available & (gnl|cdd|36498 : 145.0) no description available & (ipr022163 : 109.69118) GTP cyclohydrolase N-terminal & (loc_os02g36340.2 : 57.4) no description available & (at5g64300 : 50.8) encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively; GTP cyclohydrolase II (GCH); FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: riboflavin biosynthesis protein, putative (TAIR:AT2G22450.1); Has 11690 Blast hits to 11688 proteins in 2324 species: Archae - 209; Bacteria - 6956; Metazoa - 1; Fungi - 397; Plants - 132; Viruses - 0; Other Eukaryotes - 3995 (source: NCBI BLink). & (chl4|525958 : 49.7) no description available & (reliability: 101.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42619 PE=4 SV=1)'" P '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'tr|b7g3q9|b7g3q9_phatc' "'(gnl|cdd|29568 : 232.0) no description available & (gnl|cdd|36193 : 225.0) no description available & (at1g50110 : 178.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT1G50090.1); Has 12195 Blast hits to 12195 proteins in 2532 species: Archae - 155; Bacteria - 7654; Metazoa - 266; Fungi - 412; Plants - 250; Viruses - 0; Other Eukaryotes - 3458 (source: NCBI BLink). & (loc_os05g48450.6 : 176.0) no description available & (chl4|522677 : 148.0) no description available & (reliability: 352.0) & (original description: Branched-chain-amino-acid aminotransferase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28585 PE=3 SV=1)'" P '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'tr|b7fp52|b7fp52_phatc' "'(gnl|cdd|35383 : 64.1) no description available & (gnl|cdd|31389 : 53.5) no description available & (chl4|523067 : 45.8) no description available & (at1g04600 : 44.3) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (loc_os02g57190.1 : 43.9) no description available & (q5jly8|goga5_orysa : 36.6) Golgin-84 - Oryza sativa (Rice) & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42675 PE=4 SV=1)'" P '18.4.1' 'Co-factor and vitamine metabolism.pantothenate.branched-chain amino acid aminotransferase' 'tr|b7ft57|b7ft57_phatc' "'(gnl|cdd|36193 : 369.0) no description available & (gnl|cdd|29568 : 325.0) no description available & (loc_os05g48450.6 : 213.0) no description available & (at5g65780 : 207.0) encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant; ATBCAT-5; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: little nuclei4 (TAIR:AT5G65770.3). & (chl4|522677 : 170.0) no description available & (ipr001544 : 52.777134) Aminotransferase, class IV & (reliability: 414.0) & (original description: Branched-chain-amino-acid aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43697 PE=3 SV=1)'" P '18.5.2.8' "'Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase'" 'tr|b7g968|b7g968_phatc' "'(chl4|518118 : 311.0) no description available & (gnl|cdd|84012 : 173.0) no description available & (gnl|cdd|36484 : 55.4) no description available & (at1g23360 : 50.1) Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.; MENG; CONTAINS InterPro DOMAIN/s: UbiE/COQ5 methyltransferase (InterPro:IPR004033); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G57300.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9fr44|peam1_arath : 47.4) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) - Arabidopsis thaliana (Mouse-ear cress) & (loc_os05g47540.2 : 43.1) no description available & (reliability: 100.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39627 PE=4 SV=1)'" P '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'tr|b7fvz9|b7fvz9_phatc' '(at1g55805 : 79.3) BolA-like family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: chloroplast sulfur E (TAIR:AT4G26500.1); Has 3687 Blast hits to 3687 proteins in 1115 species: Archae - 26; Bacteria - 2113; Metazoa - 172; Fungi - 142; Plants - 137; Viruses - 0; Other Eukaryotes - 1097 (source: NCBI BLink). & (gnl|cdd|37524 : 77.1) no description available & (gnl|cdd|30620 : 73.5) no description available & (chl4|521079 : 64.3) no description available & (loc_os09g09790.1 : 63.5) no description available & (ipr002634 : 45.463917) BolA protein & (reliability: 152.6) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11230 PE=3 SV=1)' P '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'tr|b7g619|b7g619_phatc' "'(at5g50210 : 222.0) Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.; quinolinate synthase (QS); CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), Quinolinate synthetase A (InterPro:IPR003473); BEST Arabidopsis thaliana protein match is: sulfur E2 (TAIR:AT1G67810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|522848 : 205.0) no description available & (loc_os12g19304.2 : 184.0) no description available & (gnl|cdd|82962 : 97.1) no description available & (ipr003473 : 47.045956) Quinolinate synthetase A & (reliability: 444.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14735 PE=4 SV=1)'" P '18.7' 'Co-factor and vitamine metabolism.iron-sulphur clusters' 'tr|b7fxc0|b7fxc0_phatc' "'(loc_os02g38900.1 : 317.0) no description available & (at5g50960 : 316.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38232 : 315.0) no description available & (chl4|512723 : 275.0) no description available & (gnl|cdd|73300 : 220.0) no description available & (ipr019591 : 59.39721) ATPase-like, ParA/MinD & (p56346|mind_chlvu : 55.5) Putative septum site-determining protein minD - Chlorella vulgaris (Green alga) & (reliability: 632.0) & (original description: Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19821 PE=3 SV=1)'" P '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'tr|b5y3f4|b5y3f4_phatc' "'(gnl|cdd|84160 : 2017.0) no description available & (at5g13630 : 1702.0) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.; GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 3665 Blast hits to 3123 proteins in 644 species: Archae - 281; Bacteria - 1903; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). & (loc_os03g20700.2 : 1667.0) no description available & (chl4|524464 : 1654.0) no description available & (ipr003672 : 1500.0) CobN/magnesium chelatase & (reliability: 3404.0) & (original description: Protoporphyrin IX magnesium chelatase, subunit H OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CHLH PE=4 SV=1)'" P '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'tr|a0t0b5|a0t0b5_phatc' "'(gnl|cdd|79298 : 632.0) no description available & (q9tl08|chli_nepol : 455.0) Magnesium-chelatase subunit chlI (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) - Nephroselmis olivacea & (chl4|524023 : 448.0) no description available & (at4g18480 : 431.0) Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.; CHLI1; FUNCTIONS IN: magnesium chelatase activity, ATPase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, cell wall, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit I (InterPro:IPR011775); BEST Arabidopsis thaliana protein match is: magnesium chelatase i2 (TAIR:AT5G45930.1); Has 6584 Blast hits to 6581 proteins in 1594 species: Archae - 309; Bacteria - 5009; Metazoa - 2; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 1058 (source: NCBI BLink). & (loc_os03g36540.1 : 424.0) no description available & (reliability: 862.0) & (original description: Mg-protoporphyrin IX chelatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chlI PE=3 SV=1)'" P '19.10' 'tetrapyrrole synthesis.magnesium chelatase' 'tr|b7fta2|b7fta2_phatc' "'(o22437|chld_pea : 324.0) Magnesium-chelatase subunit chlD, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) - Pisum sativum (Garden pea) & (loc_os03g59640.1 : 317.0) no description available & (at1g08520 : 313.0) Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.; ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink). & (chl4|522598 : 310.0) no description available & (gnl|cdd|31432 : 267.0) no description available & (gnl|cdd|35991 : 42.3) no description available & (reliability: 626.0) & (original description: Mg-protoporphyrin IX chelatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50740 PE=3 SV=1)'" P '19.11' 'tetrapyrrole synthesis.magnesium protoporphyrin IX methyltransferase' 'tr|b7ftq8|b7ftq8_phatc' "'(gnl|cdd|82288 : 297.0) no description available & (chl4|512812 : 275.0) no description available & (at4g25080 : 251.0) Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.; magnesium-protoporphyrin IX methyltransferase (CHLM); CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX methyltransferase, C-terminal (InterPro:IPR010940), Magnesium protoporphyrin O-methyltransferase (InterPro:IPR010251). & (loc_os06g04150.1 : 230.0) no description available & (gnl|cdd|36484 : 116.0) no description available & (ipr010940 : 69.969154) Magnesium-protoporphyrin IX methyltransferase, C-terminal & (reliability: 502.0) & (original description: Magnesium-protoporphyrin IX methyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chlM PE=4 SV=1)'" P '19.13' 'tetrapyrrole synthesis.divinyl chlorophyllide-a 8-vinyl-reductase' 'tr|b7gc47|b7gc47_phatc' "'(at5g18660 : 259.0) Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.; PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2); FUNCTIONS IN: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g22780.1 : 257.0) no description available & (chl4|511498 : 257.0) no description available & (gnl|cdd|36417 : 100.0) no description available & (ipr016040 : 94.14362) NAD(P)-binding domain & (gnl|cdd|86857 : 72.2) no description available & (p52579|ifrh_tobac : 45.4) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 518.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30690 PE=4 SV=1)'" P '19.14' 'tetrapyrrole synthesis.protochlorophyllide reductase' 'tr|b7fy80|b7fy80_phatc' "'(gnl|cdd|82229 : 369.0) no description available & (at5g54190 : 310.0) light-dependent NADPH:protochlorophyllide oxidoreductase A; protochlorophyllide oxidoreductase A (PORA); FUNCTIONS IN: oxidoreductase activity, protochlorophyllide reductase activity; INVOLVED IN: chlorophyll biosynthetic process, response to ethylene stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Light-dependent protochlorophyllide reductase (InterPro:IPR005979), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: protochlorophyllide oxidoreductase B (TAIR:AT4G27440.2); Has 5533 Blast hits to 5523 proteins in 759 species: Archae - 38; Bacteria - 1884; Metazoa - 1114; Fungi - 682; Plants - 679; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink). & (loc_os10g35370.1 : 300.0) no description available & (q42850|porb_horvu : 298.0) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) & (chl4|510922 : 285.0) no description available & (gnl|cdd|36422 : 171.0) no description available & (ipr016040 : 93.712845) NAD(P)-binding domain & (reliability: 620.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56608 PE=4 SV=1)'" P '19.3' 'tetrapyrrole synthesis.GSA' 'tr|b7g134|b7g134_phatc' "'(gnl|cdd|80484 : 681.0) no description available & (q6yze2|gsa_orysa : 615.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Oryza sativa (Rice) & (loc_os08g41990.1 : 615.0) no description available & (at3g48730 : 608.0) glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde-2,1-aminomutase (TAIR:AT5G63570.1); Has 34778 Blast hits to 34772 proteins in 2825 species: Archae - 734; Bacteria - 23568; Metazoa - 533; Fungi - 800; Plants - 388; Viruses - 10; Other Eukaryotes - 8745 (source: NCBI BLink). & (chl4|520599 : 588.0) no description available & (gnl|cdd|36615 : 398.0) no description available & (ipr015421 : 196.26447) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 & (reliability: 1216.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50966 PE=3 SV=1)'" P '19.4' 'tetrapyrrole synthesis.ALA dehydratase' 'tr|b7fsn7|b7fsn7_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|82912 : 535.0) no description available & (gnl|cdd|38005 : 395.0) no description available & (loc_os06g49110.3 : 381.0) no description available & (at1g69740 : 375.0) Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.; HEMB1; FUNCTIONS IN: porphobilinogen synthase activity, catalytic activity, metal ion binding; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Tetrapyrrole biosynthesis, porphobilinogen synthase (InterPro:IPR001731); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT1G44318.1); Has 6820 Blast hits to 6820 proteins in 2111 species: Archae - 162; Bacteria - 3714; Metazoa - 160; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2538 (source: NCBI BLink). & (q42836|hem2_horvu : 373.0) Delta-aminolevulinic acid dehydratase, chloroplast precursor (EC 4.2.1.24) (Porphobilinogen synthase) (ALADH) - Hordeum vulgare (Barley) & (chl4|518782 : 357.0) no description available & (reliability: 3375.0) & (original description: Delta-aminolevulinic acid dehydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50723 PE=3 SV=1)'" P '19.40' 'tetrapyrrole synthesis.regulation' 'tr|b7gax7|b7gax7_phatc' "'(loc_os11g16550.1 : 100.0) no description available & (chl4|522699 : 100.0) no description available & (gnl|cdd|86866 : 97.7) no description available & (at3g59400 : 94.7) GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.; GENOMES UNCOUPLED 4 (GUN4); FUNCTIONS IN: tetrapyrrole binding, enzyme binding; INVOLVED IN: chlorophyll biosynthetic process, chloroplast-nucleus signaling pathway, positive regulation of catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GUN4-like (InterPro:IPR008629); Has 685 Blast hits to 680 proteins in 101 species: Archae - 0; Bacteria - 474; Metazoa - 4; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (ipr008629 : 49.52547) GUN4-like & (reliability: 276.06958) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15980 PE=4 SV=1)'" P '19.5' 'tetrapyrrole synthesis.porphobilinogen deaminase' 'tr|b7fwy2|b7fwy2_phatc' "'(gnl|cdd|80490 : 369.0) no description available & (loc_os02g07230.1 : 345.0) no description available & (chl4|516320 : 335.0) no description available & (q43082|hem3_pea : 333.0) Porphobilinogen deaminase, chloroplast precursor (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) - Pisum sativum (Garden pea) & (at5g08280 : 329.0) Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast.; hydroxymethylbilane synthase (HEMC); FUNCTIONS IN: hydroxymethylbilane synthase activity; INVOLVED IN: chlorophyll biosynthetic process, defense response to bacterium, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porphobilinogen deaminase, dipyrromethane cofactor binding site (InterPro:IPR022419), Tetrapyrrole biosynthesis, hydroxymethylbilane synthase (InterPro:IPR000860), Porphobilinogen deaminase, N-terminal (InterPro:IPR022417), Porphobilinogen deaminase, C-terminal domain (InterPro:IPR022418); Has 7343 Blast hits to 7329 proteins in 2247 species: Archae - 198; Bacteria - 4150; Metazoa - 157; Fungi - 178; Plants - 78; Viruses - 0; Other Eukaryotes - 2582 (source: NCBI BLink). & (gnl|cdd|38103 : 320.0) no description available & (ipr022417 : 168.76205) Porphobilinogen deaminase, N-terminal & (reliability: 658.0) & (original description: Hydroxymethylbilane synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hemC PE=3 SV=1)'" P '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'tr|b7gb77|b7gb77_phatc' "'(gnl|cdd|38083 : 311.0) no description available & (gnl|cdd|48141 : 309.0) no description available & (ipr000257 : 200.8192) Uroporphyrinogen decarboxylase (URO-D) & (chl4|518465 : 167.0) no description available & (at2g40490 : 164.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (loc_os01g43390.1 : 163.0) no description available & (q42967|dcup_tobac : 155.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (reliability: 328.0) & (original description: Uroporphyrinogen decarboxylase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hemE PE=4 SV=1)'" P '19.7' 'tetrapyrrole synthesis.uroporphyrinogen decarboxylase' 'tr|b7fut6|b7fut6_phatc' "'(gnl|cdd|80524 : 438.0) no description available & (gnl|cdd|38083 : 385.0) no description available & (q42967|dcup_tobac : 382.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (loc_os03g21900.1 : 382.0) no description available & (at2g40490 : 378.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (chl4|518465 : 378.0) no description available & (ipr000257 : 241.0783) Uroporphyrinogen decarboxylase (URO-D) & (reliability: 756.0) & (original description: Uroporphyrinogen decarboxylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HemE_2 PE=3 SV=1)'" P '19.9' 'tetrapyrrole synthesis.protoporphyrin IX oxidase' 'tr|b7gdu9|b7gdu9_phatc' "'(chl4|526010 : 323.0) no description available & (at4g01690 : 311.0) Encodes protoporphyrinogen oxidase (PPOX).; PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2189 Blast hits to 2187 proteins in 783 species: Archae - 6; Bacteria - 1392; Metazoa - 195; Fungi - 135; Plants - 152; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink). & (loc_os01g18320.1 : 311.0) no description available & (o24163|ppoc_tobac : 304.0) Protoporphyrinogen oxidase, chloroplast precursor (EC 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36490 : 242.0) no description available & (gnl|cdd|31425 : 192.0) no description available & (ipr002937 : 48.60275) Amine oxidase & (reliability: 622.0) & (original description: Protoporphyrinogen oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PPO PE=3 SV=1)'" P '2.1.1.3' 'major CHO metabolism.synthesis.sucrose.FBPase' 'tr|b7gar0|b7gar0_phatc' "'(gnl|cdd|30130 : 410.0) no description available & (gnl|cdd|36671 : 400.0) no description available & (p46276|f16p2_soltu : 336.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) (CY-F1) - Solanum tuberosum (Potato) & (loc_os01g64660.2 : 333.0) no description available & (at1g43670 : 328.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (chl4|513072 : 274.0) no description available & (ipr000146 : 248.49687) Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase & (reliability: 656.0) & (original description: Fructose-1,6-bisphosphatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FBP PE=3 SV=1)'" P '2.1.2.3' 'major CHO metabolism.synthesis.starch.starch branching' 'tr|b7g814|b7g814_phatc' "'(at3g20440 : 35.4) BE1 ia a putative glycoside hydrolase. It plays vital roles during embryogenesis and in carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.; EMBRYO DEFECTIVE 2729 (EMB2729); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity; INVOLVED IN: post-embryonic development, carbohydrate metabolic process, embryo development ending in seed dormancy; LOCATED IN: plastid; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Alpha-amylase, C-terminal all beta (InterPro:IPR006048), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycosyl hydrolase, family 13, subfamily, catalytic domain (InterPro:IPR006589), Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: starch branching enzyme 2.1 (TAIR:AT2G36390.1). & (reliability: 70.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48661 PE=4 SV=1)'" P '2.2.2.6' 'major CHO metabolism.degradation.starch.transporter' 'tr|b7fpd9|b7fpd9_phatc' "'(gnl|cdd|36654 : 153.0) no description available & (loc_os01g07730.1 : 134.0) no description available & (at5g33320 : 123.0) Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.; CAB UNDEREXPRESSED 1 (CUE1); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: mitochondrion, chloroplast, plastid, plastid inner membrane, chloroplast envelope; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate (pep)/phosphate translocator 2 (TAIR:AT3G01550.1); Has 2791 Blast hits to 2789 proteins in 409 species: Archae - 9; Bacteria - 295; Metazoa - 571; Fungi - 421; Plants - 1194; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (p49133|tpt_maize : 117.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Zea mays (Maize) & (chl4|523123 : 115.0) no description available & (gnl|cdd|66803 : 92.2) no description available & (ipr004853 : 57.15916) Domain of unknown function DUF250 & (reliability: 228.0) & (original description: Triose phosphate/phosphate translocator OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tpt1 PE=4 SV=1)'" P '20' 'stress' 'tr|b7s3w9|b7s3w9_phatc' "'(ipr011990 : 114.487404) Tetratricopeptide-like helical & (gnl|cdd|35770 : 109.0) no description available & (loc_os02g51810.1 : 74.3) no description available & (at5g09420 : 70.1) translocon at the outer membrane of chloroplasts 64-V (TOC64-V); FUNCTIONS IN: amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1); Has 28606 Blast hits to 25511 proteins in 2588 species: Archae - 476; Bacteria - 13320; Metazoa - 3833; Fungi - 2411; Plants - 1768; Viruses - 0; Other Eukaryotes - 6798 (source: NCBI BLink). & (chl4|520447 : 68.6) no description available & (gnl|cdd|29151 : 64.7) no description available & (q43468|stip_soybn : 63.2) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 136.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1626 PE=4 SV=1)'" P '20.1' 'stress.biotic' 'tr|b7fp70|b7fp70_phatc' "'(at1g63860 : 39.3) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63870.1); Has 21839 Blast hits to 14719 proteins in 768 species: Archae - 18; Bacteria - 1232; Metazoa - 3443; Fungi - 708; Plants - 12993; Viruses - 298; Other Eukaryotes - 3147 (source: NCBI BLink). & (gnl|cdd|36280 : 36.5) no description available & (gnl|cdd|85876 : 35.4) no description available & (reliability: 78.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42689 PE=4 SV=1)'" P '20.1.3' 'stress.biotic.signalling' 'tr|b7fye2|b7fye2_phatc' '(gnl|cdd|68539 : 69.9) no description available & (gnl|cdd|36880 : 60.1) no description available & (loc_os02g33180.1 : 56.6) no description available & (at5g51700 : 51.2) Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.; PPHB SUSCEPTIBLE 2 (PBS2); CONTAINS InterPro DOMAIN/s: Cysteine/histidine-rich domain (InterPro:IPR007051); Has 933 Blast hits to 477 proteins in 168 species: Archae - 0; Bacteria - 18; Metazoa - 449; Fungi - 191; Plants - 188; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 102.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35396 PE=4 SV=1)' P '20.1.7' 'stress.biotic.PR-proteins' 'tr|b7g5l6|b7g5l6_phatc' "'(chl4|523376 : 135.0) no description available & (gnl|cdd|34495 : 90.8) no description available & (gnl|cdd|35752 : 79.3) no description available & (loc_os10g42190.2 : 77.0) no description available & (at5g44700 : 63.9) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p28523|csk2a_maize : 44.7) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 123.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47992 PE=4 SV=1)'" P '20.2' 'stress.abiotic' 'tr|b7gcm8|b7gcm8_phatc' "'(chl4|519850 : 471.0) no description available & (gnl|cdd|34641 : 321.0) no description available & (gnl|cdd|36376 : 159.0) no description available & (ipr018966 : 157.02208) VTC domain & (loc_os04g48390.1 : 48.9) no description available & (at4g11810 : 44.7) Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2483 Blast hits to 2480 proteins in 874 species: Archae - 51; Bacteria - 1442; Metazoa - 164; Fungi - 323; Plants - 253; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink). & (reliability: 86.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50019 PE=4 SV=1)'" P '20.2' 'stress.abiotic' 'tr|b7s438|b7s438_phatc' "'(chl4|514335 : 388.0) no description available & (loc_os02g36570.1 : 386.0) no description available & (at5g64940 : 380.0) Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.; ABC2 homolog 13 (ATH13); FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07700.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|31005 : 341.0) no description available & (gnl|cdd|36449 : 284.0) no description available & (ipr004147 : 63.248608) ABC-1 & (reliability: 760.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd474 PE=4 SV=1)'" P '20.2' 'stress.abiotic' 'tr|b7g3d1|b7g3d1_phatc' "'(gnl|cdd|36376 : 60.0) no description available & (gnl|cdd|66759 : 59.6) no description available & (loc_os02g10780.1 : 57.0) no description available & (at2g26660 : 55.1) SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (chl4|519850 : 38.9) no description available & (reliability: 110.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47434 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fub7|b7fub7_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (gnl|cdd|35323 : 959.0) no description available & (q03685|bip5_tobac : 819.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|84440 : 817.0) no description available & (at5g42020 : 813.0) Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.; luminal binding protein (BIP); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, polar nucleus fusion, response to endoplasmic reticulum stress; LOCATED IN: in 8 components; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 34912 Blast hits to 34423 proteins in 4667 species: Archae - 159; Bacteria - 17150; Metazoa - 3676; Fungi - 1797; Plants - 1301; Viruses - 340; Other Eukaryotes - 10489 (source: NCBI BLink). & (chl4|518564 : 799.0) no description available & (loc_os02g02410.1 : 780.0) no description available & (reliability: 1626.0) & (original description: ER luminal binding protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=BiP PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'sp|a0t0h7|dnak_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (gnl|cdd|79309 : 930.0) no description available & (gnl|cdd|35325 : 710.0) no description available & (at4g24280 : 682.0) Involved in protein import into chloroplasts during early developmental stages.; chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink). & (loc_os05g23740.1 : 679.0) no description available & (q02028|hsp7s_pea : 677.0) Stromal 70 kDa heat shock-related protein, chloroplast precursor - Pisum sativum (Garden pea) & (chl4|522821 : 666.0) no description available & (reliability: 1364.0) & (original description: Chaperone protein dnaK OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=dnaK PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7g7h8|b7g7h8_phatc' "'(chl4|523046 : 157.0) no description available & (loc_os08g41110.1 : 149.0) no description available & (at2g21510 : 148.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT4G39150.2); Has 23338 Blast hits to 23238 proteins in 3239 species: Archae - 174; Bacteria - 9334; Metazoa - 4020; Fungi - 2231; Plants - 2394; Viruses - 20; Other Eukaryotes - 5165 (source: NCBI BLink). & (gnl|cdd|35910 : 115.0) no description available & (gnl|cdd|30832 : 96.8) no description available & (q04960|dnjh_cucsa : 65.1) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (ipr001623 : 56.922775) Heat shock protein DnaJ, N-terminal & (reliability: 296.0) & (original description: 3R-hydroxyacyl-[acyl carrier protein] dehydrase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FABZ_1 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fsq5|b7fsq5_phatc' "'(gnl|cdd|30832 : 111.0) no description available & (chl4|511016 : 95.1) no description available & (gnl|cdd|35932 : 91.6) no description available & (loc_os05g48810.1 : 88.6) no description available & (at3g08910 : 86.7) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink). & (ipr001623 : 67.508934) Heat shock protein DnaJ, N-terminal & (q04960|dnjh_cucsa : 67.4) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 173.4) & (original description: Chaperone, dnaj-like protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP40A PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fx28|b7fx28_phatc' "'(gnl|cdd|35941 : 119.0) no description available & (loc_os12g15590.2 : 73.9) no description available & (gnl|cdd|30832 : 66.4) no description available & (at1g61770 : 66.2) J domain protein.; Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 22399 Blast hits to 22393 proteins in 3184 species: Archae - 166; Bacteria - 8830; Metazoa - 4267; Fungi - 2142; Plants - 2270; Viruses - 12; Other Eukaryotes - 4712 (source: NCBI BLink). & (chl4|516997 : 51.2) no description available & (ipr001623 : 42.52534) Heat shock protein DnaJ, N-terminal & (q04960|dnjh_cucsa : 35.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 132.4) & (original description: Chaperone, dnaj-like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP40C PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fpy8|b7fpy8_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (gnl|cdd|80608 : 971.0) no description available & (gnl|cdd|35325 : 841.0) no description available & (chl4|525943 : 728.0) no description available & (q01899|hsp7m_phavu : 727.0) Heat shock 70 kDa protein, mitochondrial precursor - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g09590 : 721.0) heat shock protein 70 (Hsc70-5); nuclear; mitochondrial HSO70 2 (MTHSC70-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to salt stress, response to virus, response to heat; LOCATED IN: mitochondrion, cell wall, plasma membrane, chloroplast, mitochondrial matrix; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: mitochondrial heat shock protein 70-1 (TAIR:AT4G37910.1); Has 35090 Blast hits to 34955 proteins in 4871 species: Archae - 160; Bacteria - 17405; Metazoa - 3531; Fungi - 1665; Plants - 1246; Viruses - 305; Other Eukaryotes - 10778 (source: NCBI BLink). & (loc_os02g53420.1 : 716.0) no description available & (reliability: 1442.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Hsp70_1 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7g3y2|b7g3y2_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (gnl|cdd|35323 : 862.0) no description available & (gnl|cdd|84440 : 819.0) no description available & (at5g02500 : 725.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g38530.1 : 722.0) no description available & (q03685|bip5_tobac : 721.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (chl4|518564 : 702.0) no description available & (reliability: 1450.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Hsp70_2 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fq84|b7fq84_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (loc_os03g16920.1 : 883.0) no description available & (gnl|cdd|84440 : 881.0) no description available & (at3g12580 : 869.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p26413|hsp70_soybn : 867.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (gnl|cdd|35323 : 863.0) no description available & (chl4|525480 : 833.0) no description available & (reliability: 1738.0) & (original description: Protein heat shock protein Hsp70 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP70A PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7ge61|b7ge61_phatc' "'(gnl|cdd|35326 : 460.0) no description available & (at1g79930 : 347.0) encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock; heat shock protein 91 (HSP91); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84440 : 332.0) no description available & (loc_os01g08560.2 : 321.0) no description available & (ipr013126 : 237.82019) Heat shock protein 70 family & (chl4|516599 : 231.0) no description available & (q03684|bip4_tobac : 206.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (reliability: 694.0) & (original description: Heat shock protein Hsp70 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP70F PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7gce9|b7gce9_phatc' "'(gnl|cdd|35327 : 415.0) no description available & (at4g16660 : 315.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g48110.1 : 295.0) no description available & (gnl|cdd|84440 : 237.0) no description available & (chl4|510023 : 231.0) no description available & (ipr013126 : 174.08017) Heat shock protein 70 family & (q03684|bip4_tobac : 147.0) Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) - Nicotiana tabacum (Common tobacco) & (reliability: 630.0) & (original description: Protein heat shock protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP70G PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7gef7|b7gef7_phatc' "'(ipr001404 : 1500.0) Heat shock protein Hsp90 & (gnl|cdd|81471 : 645.0) no description available & (gnl|cdd|35243 : 594.0) no description available & (at2g04030 : 543.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (loc_os08g38086.3 : 533.0) no description available & (q08277|hsp82_maize : 512.0) Heat shock protein 82 - Zea mays (Maize) & (chl4|525808 : 503.0) no description available & (reliability: 1086.0) & (original description: Heat shock protein Hsp90 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP90 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b5y5r0|b5y5r0_phatc' "'(gnl|cdd|81471 : 606.0) no description available & (gnl|cdd|35242 : 488.0) no description available & (p36183|enpl_horvu : 319.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (loc_os09g29840.1 : 316.0) no description available & (at5g56010 : 310.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium.; heat shock protein 81-3 (HSP81-3); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, response to heat, cellular response to calcium ion; LOCATED IN: cytosol, nucleolus, plasma membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: heat shock protein 81-2 (TAIR:AT5G56030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|525808 : 308.0) no description available & (ipr001404 : 184.96182) Heat shock protein Hsp90 & (reliability: 620.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18793 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b5y5i5|b5y5i5_phatc' "'(at2g25140 : 867.0) Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.; casein lytic proteinase B4 (CLPB4); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to heat; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B3 (TAIR:AT5G15450.1); Has 30488 Blast hits to 27328 proteins in 3166 species: Archae - 421; Bacteria - 19864; Metazoa - 870; Fungi - 613; Plants - 740; Viruses - 7; Other Eukaryotes - 7973 (source: NCBI BLink). & (loc_os03g31300.1 : 859.0) no description available & (gnl|cdd|83547 : 835.0) no description available & (chl4|518776 : 829.0) no description available & (q6f2y7|hs101_orysa : 685.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|36269 : 673.0) no description available & (ipr013093 : 113.9661) ATPase, AAA-2 & (reliability: 1734.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25856 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b5y3p1|b5y3p1_phatc' "'(gnl|cdd|30832 : 386.0) no description available & (at2g22360 : 298.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink). & (loc_os05g26926.1 : 298.0) no description available & (chl4|513011 : 267.0) no description available & (gnl|cdd|35931 : 197.0) no description available & (q04960|dnjh_cucsa : 140.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (ipr001623 : 65.49403) Heat shock protein DnaJ, N-terminal & (reliability: 596.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_50996 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fy83|b7fy83_phatc' "'(gnl|cdd|30832 : 302.0) no description available & (at5g48030 : 179.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g11440.1 : 159.0) no description available & (gnl|cdd|35932 : 125.0) no description available & (chl4|513082 : 104.0) no description available & (ipr001623 : 77.06412) Heat shock protein DnaJ, N-terminal & (q04960|dnjh_cucsa : 64.3) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 358.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12140 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7gdn1|b7gdn1_phatc' "'(ipr001404 : 1500.0) Heat shock protein Hsp90 & (gnl|cdd|35243 : 587.0) no description available & (gnl|cdd|81471 : 547.0) no description available & (at4g24190 : 507.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36183|enpl_horvu : 499.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (chl4|518563 : 497.0) no description available & (loc_os06g50300.1 : 496.0) no description available & (reliability: 1014.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16786 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7frv0|b7frv0_phatc' "'(gnl|cdd|30832 : 275.0) no description available & (gnl|cdd|35931 : 246.0) no description available & (at3g62600 : 179.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (loc_os05g06440.1 : 172.0) no description available & (q04960|dnjh_cucsa : 162.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (chl4|517115 : 159.0) no description available & (ipr001623 : 72.40179) Heat shock protein DnaJ, N-terminal & (reliability: 358.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18036 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fuc8|b7fuc8_phatc' "'(gnl|cdd|30888 : 740.0) no description available & (loc_os03g31300.1 : 650.0) no description available & (at5g15450 : 644.0) Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.; casein lytic proteinase B3 (CLPB3); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: chloroplast organization, response to heat; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpB (InterPro:IPR017730), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4 (TAIR:AT2G25140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|518776 : 625.0) no description available & (q6f2y7|hs101_orysa : 607.0) Heat shock protein 101 - Oryza sativa (Rice) & (gnl|cdd|36269 : 568.0) no description available & (ipr013093 : 106.01322) ATPase, AAA-2 & (reliability: 1288.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26173 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fxr6|b7fxr6_phatc' "'(at1g79940 : 188.0) J domain protein localized in ER membrane. Mutants have defective pollen germination.; ATERDJ2A; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, integral to endoplasmic reticulum membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DnaJ / Sec63 Brl domains-containing protein (TAIR:AT4G21180.1). & (loc_os04g24180.2 : 184.0) no description available & (gnl|cdd|47902 : 165.0) no description available & (gnl|cdd|35940 : 153.0) no description available & (chl4|516187 : 143.0) no description available & (ipr004179 : 110.42877) Sec63 domain & (q04960|dnjh_cucsa : 47.4) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 376.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27039 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7g4p7|b7g4p7_phatc' "'(gnl|cdd|35931 : 298.0) no description available & (at5g22060 : 291.0) Co-chaperonin similar to E. coli DnaJ; DNAJ homologue 2 (J2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 3 (TAIR:AT3G44110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os03g44620.3 : 283.0) no description available & (q04960|dnjh_cucsa : 271.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (gnl|cdd|30832 : 235.0) no description available & (chl4|517115 : 225.0) no description available & (ipr001623 : 67.716576) Heat shock protein DnaJ, N-terminal & (reliability: 582.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38015 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7g4c8|b7g4c8_phatc' "'(gnl|cdd|35931 : 293.0) no description available & (loc_os02g43930.3 : 276.0) no description available & (at5g22060 : 262.0) Co-chaperonin similar to E. coli DnaJ; DNAJ homologue 2 (J2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ homologue 3 (TAIR:AT3G44110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q04960|dnjh_cucsa : 260.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (gnl|cdd|30832 : 223.0) no description available & (chl4|517115 : 222.0) no description available & (ipr001623 : 66.18718) Heat shock protein DnaJ, N-terminal & (reliability: 524.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42151 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fqh8|b7fqh8_phatc' "'(gnl|cdd|30832 : 84.5) no description available & (gnl|cdd|35932 : 79.3) no description available & (at3g62600 : 75.9) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (chl4|517115 : 75.5) no description available & (loc_os05g26926.1 : 74.3) no description available & (q04960|dnjh_cucsa : 65.9) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (ipr001623 : 48.258976) Heat shock protein DnaJ, N-terminal & (reliability: 151.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43061 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fqr3|b7fqr3_phatc' "'(gnl|cdd|35652 : 88.2) no description available & (at1g21660 : 76.6) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink). & (loc_os01g25320.1 : 73.9) no description available & (chl4|513092 : 65.9) no description available & (ipr001623 : 41.862045) Heat shock protein DnaJ, N-terminal & (gnl|cdd|84229 : 40.7) no description available & (reliability: 143.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43133 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7fv17|b7fv17_phatc' "'(gnl|cdd|35770 : 183.0) no description available & (at5g03160 : 165.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.; homolog of mamallian P58IPK (P58IPK); FUNCTIONS IN: heat shock protein binding, binding; INVOLVED IN: protein folding; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 32693 Blast hits to 30813 proteins in 3428 species: Archae - 634; Bacteria - 13349; Metazoa - 5479; Fungi - 2550; Plants - 3479; Viruses - 15; Other Eukaryotes - 7187 (source: NCBI BLink). & (loc_os02g10180.2 : 162.0) no description available & (chl4|511277 : 133.0) no description available & (gnl|cdd|30832 : 119.0) no description available & (ipr011990 : 98.42337) Tetratricopeptide-like helical & (q04960|dnjh_cucsa : 67.8) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 330.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44959 PE=4 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7gd29|b7gd29_phatc' "'(gnl|cdd|35846 : 69.5) no description available & (gnl|cdd|34769 : 68.9) no description available & (at2g41690 : 60.8) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B3 (HSFB3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleus; EXPRESSED IN: inflorescence meristem, leaf whorl, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 329; Fungi - 465; Plants - 775; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (loc_os09g28354.1 : 60.1) no description available & (chl4|525077 : 59.3) no description available & (ipr011991 : 47.521378) Winged helix-turn-helix transcription repressor DNA-binding & (reliability: 119.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50136 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7g704|b7g704_phatc' "'(at1g74310 : 816.0) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.; heat shock protein 101 (HSP101); FUNCTIONS IN: protein binding, ATPase activity, ATP binding; INVOLVED IN: response to high light intensity, response to hydrogen peroxide, response to heat, protein unfolding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA-type, core (InterPro:IPR003959), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: casein lytic proteinase B2 (TAIR:AT4G14670.1); Has 27671 Blast hits to 24472 proteins in 3146 species: Archae - 360; Bacteria - 17866; Metazoa - 1124; Fungi - 430; Plants - 707; Viruses - 13; Other Eukaryotes - 7171 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 781.0) Heat shock protein 101 - Oryza sativa (Rice) & (loc_os05g44340.1 : 781.0) no description available & (gnl|cdd|83547 : 752.0) no description available & (chl4|518085 : 732.0) no description available & (gnl|cdd|36269 : 673.0) no description available & (ipr013093 : 105.8236) ATPase, AAA-2 & (reliability: 1632.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51134 PE=3 SV=1)'" P '20.2.1' 'stress.abiotic.heat' 'tr|b7ges3|b7ges3_phatc' "'(ipr001404 : 1500.0) Heat shock protein Hsp90 & (at5g56010 : 819.0) A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium.; heat shock protein 81-3 (HSP81-3); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, response to heat, cellular response to calcium ion; LOCATED IN: cytosol, nucleolus, plasma membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: heat shock protein 81-2 (TAIR:AT5G56030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|525808 : 806.0) no description available & (q08277|hsp82_maize : 801.0) Heat shock protein 82 - Zea mays (Maize) & (loc_os08g39140.1 : 801.0) no description available & (gnl|cdd|35242 : 773.0) no description available & (gnl|cdd|84591 : 712.0) no description available & (reliability: 1638.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55230 PE=3 SV=1)'" P '20.2.2' 'stress.abiotic.cold' 'tr|b7g0q6|b7g0q6_phatc' "'(loc_os02g02870.1 : 91.3) no description available & (at2g21060 : 82.0) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 81.8) no description available & (p27484|grp2_nicsy : 80.9) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|38280 : 73.6) no description available & (chl4|523223 : 66.2) no description available & (ipr012340 : 58.643436) Nucleic acid-binding, OB-fold & (reliability: 246.51227) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12737 PE=4 SV=1)'" P '20.2.2' 'stress.abiotic.cold' 'tr|b7g5b5|b7g5b5_phatc' "'(loc_os02g02870.1 : 72.8) no description available & (at2g21060 : 70.9) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|84686 : 69.1) no description available & (p27484|grp2_nicsy : 63.9) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (chl4|523223 : 56.6) no description available & (gnl|cdd|38280 : 54.4) no description available & (ipr012340 : 40.193768) Nucleic acid-binding, OB-fold & (reliability: 201.02121) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47905 PE=4 SV=1)'" P '20.2.5' 'stress.abiotic.light' 'tr|b7g898|b7g898_phatc' "'(ipr009091 : 153.93672) Regulator of chromosome condensation/beta-lactamase-inhibitor protein II & (gnl|cdd|34783 : 92.4) no description available & (loc_os02g34860.1 : 85.5) no description available & (gnl|cdd|36640 : 79.0) no description available & (at5g63860 : 77.4) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus.; UVB-RESISTANCE 8 (UVR8); FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity; INVOLVED IN: response to UV, response to UV-B; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|522357 : 65.5) no description available & (reliability: 154.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39304 PE=4 SV=1)'" P '20.2.5' 'stress.abiotic.light' 'tr|b7fqr3|b7fqr3_phatc' "'(gnl|cdd|35652 : 88.2) no description available & (at1g21660 : 76.6) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink). & (loc_os01g25320.1 : 73.9) no description available & (chl4|513092 : 65.9) no description available & (ipr001623 : 41.862045) Heat shock protein DnaJ, N-terminal & (gnl|cdd|84229 : 40.7) no description available & (reliability: 147.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43133 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7g7a0|b7g7a0_phatc' "'(chl4|519075 : 257.0) no description available & (at4g27080 : 256.0) putative protein; PDI-like 5-4 (PDIL5-4); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: PDI-like 5-3 (TAIR:AT3G20560.1); Has 8490 Blast hits to 6181 proteins in 1071 species: Archae - 57; Bacteria - 1584; Metazoa - 3355; Fungi - 1092; Plants - 1073; Viruses - 5; Other Eukaryotes - 1324 (source: NCBI BLink). & (loc_os07g34030.1 : 234.0) no description available & (gnl|cdd|87414 : 137.0) no description available & (gnl|cdd|37878 : 124.0) no description available & (p80284|pdi_horvu : 71.2) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) (Endosperm protein E-1) - Hordeum vulgare (Barley) & (ipr012335 : 60.56036) no description available & (reliability: 518.6387) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14990 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7g1g4|b7g1g4_phatc' "'(at4g04950 : 274.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (loc_os10g35720.1 : 273.0) no description available & (chl4|521766 : 230.0) no description available & (gnl|cdd|36129 : 184.0) no description available & (gnl|cdd|48577 : 159.0) no description available & (ipr012335 : 137.97278) no description available & (p23400|trxm_chlre : 37.7) Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2) - Chlamydomonas reinhardtii & (reliability: 548.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27972 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7fns4|b7fns4_phatc' "'(gnl|cdd|48510 : 107.0) no description available & (chl4|516936 : 88.6) no description available & (loc_os05g06430.1 : 82.0) no description available & (at2g47470 : 80.9) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; UNFERTILIZED EMBRYO SAC 5 (UNE5); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress, double fertilization forming a zygote and endosperm, embryo sac development, pollen tube development, embryo development ending in seed dormancy; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Endoplasmic reticulum, protein ERp29, C-terminal (InterPro:IPR011679), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 37639 Blast hits to 19288 proteins in 2969 species: Archae - 403; Bacteria - 17566; Metazoa - 6414; Fungi - 2106; Plants - 3416; Viruses - 32; Other Eukaryotes - 7702 (source: NCBI BLink). & (p38661|pdia6_medsa : 79.7) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (gnl|cdd|35411 : 79.2) no description available & (ipr012335 : 63.137383) no description available & (reliability: 190.74466) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42566 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7fr17|b7fr17_phatc' "'(gnl|cdd|36942 : 85.4) no description available & (gnl|cdd|48510 : 78.4) no description available & (chl4|521782 : 68.6) no description available & (loc_os05g47930.2 : 64.3) no description available & (p38661|pdia6_medsa : 55.8) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g32920 : 53.5) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-3 (PDIL2-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 34824 Blast hits to 18409 proteins in 2879 species: Archae - 382; Bacteria - 17291; Metazoa - 5423; Fungi - 1895; Plants - 2648; Viruses - 40; Other Eukaryotes - 7145 (source: NCBI BLink). & (ipr012335 : 40.060238) no description available & (reliability: 100.8) & (original description: Sulfhydryl oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43224 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7fpj0|b7fpj0_phatc' "'(gnl|cdd|39478 : 97.1) no description available & (gnl|cdd|48510 : 96.9) no description available & (chl4|524522 : 85.1) no description available & (loc_os04g35290.1 : 81.3) no description available & (p29828|pdi_medsa : 79.3) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (at5g60640 : 75.1) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.; PDI-like 1-4 (PDIL1-4); CONTAINS InterPro DOMAIN/s: Disulphide isomerase (InterPro:IPR005788), Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-3 (TAIR:AT3G54960.1). & (ipr012335 : 60.888863) no description available & (reliability: 203.69743) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9171 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7frg4|b7frg4_phatc' "'(gnl|cdd|36522 : 82.4) no description available & (at3g17880 : 65.5) Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.; tetraticopeptide domain-containing thioredoxin (TDX); FUNCTIONS IN: protein binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: HSP70-interacting protein 1 (TAIR:AT4G22670.1); Has 25327 Blast hits to 23050 proteins in 2977 species: Archae - 386; Bacteria - 12482; Metazoa - 3860; Fungi - 1433; Plants - 2443; Viruses - 7; Other Eukaryotes - 4716 (source: NCBI BLink). & (loc_os09g23650.1 : 64.3) no description available & (gnl|cdd|29151 : 59.7) no description available & (ipr011990 : 56.20365) Tetratricopeptide-like helical & (chl4|519301 : 47.4) no description available & (reliability: 131.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9462 PE=4 SV=1)'" P '21.1' 'redox.thioredoxin' 'tr|b7g0c9|b7g0c9_phatc' "'(gnl|cdd|36126 : 120.0) no description available & (gnl|cdd|48496 : 107.0) no description available & (ipr012335 : 88.492485) no description available & (chl4|514004 : 86.3) no description available & (p80028|trxh_chlre : 79.0) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (at3g51030 : 75.9) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (loc_os09g23650.1 : 75.9) no description available & (reliability: 259.29877) & (original description: Thioredoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Trx-h1 PE=3 SV=1)'" P '21.1.1' 'redox.thioredoxin.PDIL' 'tr|b7g7a0|b7g7a0_phatc' "'(chl4|519075 : 257.0) no description available & (at4g27080 : 256.0) putative protein; PDI-like 5-4 (PDIL5-4); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: PDI-like 5-3 (TAIR:AT3G20560.1); Has 8490 Blast hits to 6181 proteins in 1071 species: Archae - 57; Bacteria - 1584; Metazoa - 3355; Fungi - 1092; Plants - 1073; Viruses - 5; Other Eukaryotes - 1324 (source: NCBI BLink). & (loc_os07g34030.1 : 234.0) no description available & (gnl|cdd|87414 : 137.0) no description available & (gnl|cdd|37878 : 124.0) no description available & (p80284|pdi_horvu : 71.2) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) (Endosperm protein E-1) - Hordeum vulgare (Barley) & (ipr012335 : 60.56036) no description available & (reliability: 512.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14990 PE=4 SV=1)'" P '21.1.1' 'redox.thioredoxin.PDIL' 'tr|b7fr17|b7fr17_phatc' "'(gnl|cdd|36942 : 85.4) no description available & (gnl|cdd|48510 : 78.4) no description available & (chl4|521782 : 68.6) no description available & (loc_os05g47930.2 : 64.3) no description available & (p38661|pdia6_medsa : 55.8) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g32920 : 53.5) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-3 (PDIL2-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 34824 Blast hits to 18409 proteins in 2879 species: Archae - 382; Bacteria - 17291; Metazoa - 5423; Fungi - 1895; Plants - 2648; Viruses - 40; Other Eukaryotes - 7145 (source: NCBI BLink). & (ipr012335 : 40.060238) no description available & (reliability: 107.0) & (original description: Sulfhydryl oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43224 PE=4 SV=1)'" P '21.1.2' 'redox.thioredoxin.QSOX' 'tr|b7fr17|b7fr17_phatc' "'(gnl|cdd|36942 : 85.4) no description available & (gnl|cdd|48510 : 78.4) no description available & (chl4|521782 : 68.6) no description available & (loc_os05g47930.2 : 64.3) no description available & (p38661|pdia6_medsa : 55.8) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (at2g32920 : 53.5) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-3 (PDIL2-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 34824 Blast hits to 18409 proteins in 2879 species: Archae - 382; Bacteria - 17291; Metazoa - 5423; Fungi - 1895; Plants - 2648; Viruses - 40; Other Eukaryotes - 7145 (source: NCBI BLink). & (ipr012335 : 40.060238) no description available & (reliability: 104.0) & (original description: Sulfhydryl oxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43224 PE=4 SV=1)'" P '21.2' 'redox.ascorbate and glutathione' 'tr|b7ge81|b7ge81_phatc' "'(gnl|cdd|36864 : 74.5) no description available & (gnl|cdd|48492 : 69.0) no description available & (chl4|522273 : 58.5) no description available & (at2g25080 : 53.1) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o23968|gpx4_helan : 48.1) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (Glutathione peroxidase 2) - Helianthus annuus (Common sunflower) & (loc_os06g08670.1 : 47.0) no description available & (ipr012335 : 36.253574) no description available & (reliability: 106.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50476 PE=4 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7g384|b7g384_phatc' "'(gnl|cdd|29386 : 307.0) no description available & (q7xj02|apx7_orysa : 285.0) Probable L-ascorbate peroxidase 7, chloroplast precursor (EC 1.11.1.11) (OsAPx07) - Oryza sativa (Rice) & (loc_os04g35520.4 : 285.0) no description available & (at1g77490 : 276.0) Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; thylakoidal ascorbate peroxidase (TAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: stromal ascorbate peroxidase (TAIR:AT4G08390.2); Has 7809 Blast hits to 7730 proteins in 1256 species: Archae - 55; Bacteria - 2313; Metazoa - 5; Fungi - 620; Plants - 3345; Viruses - 0; Other Eukaryotes - 1471 (source: NCBI BLink). & (chl4|518714 : 248.0) no description available & (ipr002016 : 85.32348) Haem peroxidase, plant/fungal/bacterial & (reliability: 552.0) & (original description: Ascorbate peroxidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=APX1 PE=3 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b5y428|b5y428_phatc' "'(chl4|511536 : 352.0) no description available & (gnl|cdd|35627 : 99.2) no description available & (at1g75270 : 95.1) dehydroascorbate reductase 2 (DHAR2); FUNCTIONS IN: glutathione binding, glutathione dehydrogenase (ascorbate) activity; INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: dehydroascorbate reductase (TAIR:AT1G19570.1); Has 4940 Blast hits to 4851 proteins in 1062 species: Archae - 0; Bacteria - 1874; Metazoa - 1090; Fungi - 227; Plants - 921; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). & (gnl|cdd|30970 : 92.6) no description available & (loc_os05g02530.1 : 90.1) no description available & (p49248|in21_maize : 64.7) IN2-1 protein - Zea mays (Maize) & (ipr012335 : 47.61235) no description available & (reliability: 190.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46880 PE=4 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7g155|b7g155_phatc' "'(gnl|cdd|31443 : 783.0) no description available & (gnl|cdd|36550 : 126.0) no description available & (chl4|523278 : 77.8) no description available & (ipr013027 : 73.500404) FAD-dependent pyridine nucleotide-disulphide oxidoreductase & (at1g63940 : 66.6) monodehydroascorbate reductase 6 (MDAR6); FUNCTIONS IN: ATP binding; INVOLVED IN: response to cadmium ion, response to cold; LOCATED IN: mitochondrion, stromule, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 32339 Blast hits to 32274 proteins in 3053 species: Archae - 745; Bacteria - 25255; Metazoa - 989; Fungi - 665; Plants - 640; Viruses - 0; Other Eukaryotes - 4045 (source: NCBI BLink). & (loc_os08g05570.4 : 64.7) no description available & (q40977|mdar_pea : 48.9) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase) - Pisum sativum (Garden pea) & (reliability: 133.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13154 PE=4 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7g1j9|b7g1j9_phatc' "'(gnl|cdd|29386 : 285.0) no description available & (chl4|519823 : 254.0) no description available & (at3g09640 : 210.0) Encodes a cytosolic ascorbate peroxidase APX2. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 2 (APX2); CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 1 (TAIR:AT1G07890.8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os08g43560.2 : 206.0) no description available & (q6zjj1|apx4_orysa : 203.0) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (ipr002016 : 111.12192) Haem peroxidase, plant/fungal/bacterial & (reliability: 420.0) & (original description: L-ascorbate peroxidase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13174 PE=3 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7g386|b7g386_phatc' "'(gnl|cdd|29386 : 284.0) no description available & (loc_os04g35520.4 : 278.0) no description available & (q7xj02|apx7_orysa : 277.0) Probable L-ascorbate peroxidase 7, chloroplast precursor (EC 1.11.1.11) (OsAPx07) - Oryza sativa (Rice) & (chl4|518714 : 264.0) no description available & (at4g08390 : 263.0) Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; stromal ascorbate peroxidase (SAPX); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: mitochondrion, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: thylakoidal ascorbate peroxidase (TAIR:AT1G77490.1). & (ipr002016 : 88.29674) Haem peroxidase, plant/fungal/bacterial & (reliability: 526.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47395 PE=3 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7s491|b7s491_phatc' "'(chl4|519823 : 293.0) no description available & (gnl|cdd|29386 : 256.0) no description available & (q6ty83|apx3_orysa : 205.0) Probable L-ascorbate peroxidase 3 (EC 1.11.1.11) (OsAPx03) - Oryza sativa (Rice) & (loc_os04g14680.1 : 205.0) no description available & (at4g35000 : 197.0) Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.; ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink). & (ipr002016 : 99.367836) Haem peroxidase, plant/fungal/bacterial & (reliability: 394.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1023 PE=3 SV=1)'" P '21.2.1' 'redox.ascorbate and glutathione.ascorbate' 'tr|b7s401|b7s401_phatc' "'(gnl|cdd|29386 : 90.3) no description available & (at4g35970 : 52.4) Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.; ascorbate peroxidase 5 (APX5); FUNCTIONS IN: L-ascorbate peroxidase activity, peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 3 (TAIR:AT4G35000.1); Has 11368 Blast hits to 9243 proteins in 1286 species: Archae - 103; Bacteria - 4136; Metazoa - 9; Fungi - 795; Plants - 3885; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink). & (loc_os08g43560.2 : 51.2) no description available & (q6zjj1|apx4_orysa : 50.4) Probable L-ascorbate peroxidase 4 (EC 1.11.1.11) (OsAPx04) - Oryza sativa (Rice) & (chl4|511561 : 47.0) no description available & (ipr002016 : 39.590233) Haem peroxidase, plant/fungal/bacterial & (reliability: 104.8) & (original description: Peroxidase domain-containing protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1645 PE=3 SV=1)'" P '21.2.1.1' 'redox.ascorbate and glutathione.ascorbate.GME' 'tr|b7fxn9|b7fxn9_phatc' "'(q2r1v8|gme2_orysa : 443.0) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man 3,5-epimerase 2) - Oryza sativa (Rice) & (loc_os11g37890.1 : 443.0) no description available & (at5g28840 : 442.0) Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.; ""GDP-D-mannose 3',5'-epimerase"" (GME); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G62830.2). & (chl4|511001 : 442.0) no description available & (gnl|cdd|36642 : 329.0) no description available & (gnl|cdd|30800 : 182.0) no description available & (ipr016040 : 101.64225) NAD(P)-binding domain & (reliability: 884.0) & (original description: Nad-dependent epimerase/dehydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45434 PE=4 SV=1)'" P '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'tr|b5y5j7|b5y5j7_phatc' "'(gnl|cdd|29279 : 401.0) no description available & (gnl|cdd|35244 : 373.0) no description available & (o23732|gshb_braju : 297.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 294.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (loc_os12g34380.1 : 291.0) no description available & (chl4|517267 : 267.0) no description available & (ipr005615 : 204.5936) Glutathione synthase, eukaryotic & (reliability: 588.0) & (original description: Glutathione synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=gshB PE=3 SV=1)'" P '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'tr|b7g9q1|b7g9q1_phatc' "'(gnl|cdd|81850 : 547.0) no description available & (gnl|cdd|35626 : 518.0) no description available & (loc_os03g06740.1 : 287.0) no description available & (p80461|gshrp_tobac : 286.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54660 : 283.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (chl4|519679 : 270.0) no description available & (ipr013027 : 102.06876) FAD-dependent pyridine nucleotide-disulphide oxidoreductase & (reliability: 566.0) & (original description: Glutathione-disulfide reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Gsr_1 PE=3 SV=1)'" P '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'tr|b7fzc3|b7fzc3_phatc' "'(gnl|cdd|81850 : 593.0) no description available & (gnl|cdd|35626 : 557.0) no description available & (q43154|gshrp_spiol : 311.0) Glutathione reductase, chloroplast precursor (EC 1.8.1.7) (GR) (GRase) (Fragment) - Spinacia oleracea (Spinach) & (loc_os02g56850.3 : 300.0) no description available & (at3g54660 : 299.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (chl4|519679 : 261.0) no description available & (ipr013027 : 94.31068) FAD-dependent pyridine nucleotide-disulphide oxidoreductase & (reliability: 598.0) & (original description: Glutathione reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Gsr_2 PE=3 SV=1)'" P '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'tr|b7ge81|b7ge81_phatc' "'(gnl|cdd|36864 : 74.5) no description available & (gnl|cdd|48492 : 69.0) no description available & (chl4|522273 : 58.5) no description available & (at2g25080 : 53.1) Encodes glutathione peroxidase.; glutathione peroxidase 1 (GPX1); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7896 Blast hits to 7895 proteins in 1765 species: Archae - 2; Bacteria - 4003; Metazoa - 799; Fungi - 210; Plants - 390; Viruses - 8; Other Eukaryotes - 2484 (source: NCBI BLink). & (o23968|gpx4_helan : 48.1) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) (Glutathione peroxidase 2) - Helianthus annuus (Common sunflower) & (loc_os06g08670.1 : 47.0) no description available & (ipr012335 : 36.253574) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50476 PE=4 SV=1)'" P '21.2.2' 'redox.ascorbate and glutathione.glutathione' 'tr|b7g326|b7g326_phatc' "'(gnl|cdd|39914 : 611.0) no description available & (chl4|525395 : 424.0) no description available & (gnl|cdd|81850 : 402.0) no description available & (p27456|gshrp_pea : 225.0) Glutathione reductase, chloroplast/mitochondrial precursor (EC 1.8.1.7) (GR) (GRase) (GOR1) - Pisum sativum (Garden pea) & (at3g54660 : 222.0) Encodes glutathione reductase that is most likely localized in the chloroplast.; glutathione reductase (GR); FUNCTIONS IN: glutathione-disulfide reductase activity, copper ion binding, ATP binding; INVOLVED IN: glutathione metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), Glutathione-disulphide reductase (InterPro:IPR006324), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099); BEST Arabidopsis thaliana protein match is: glutathione-disulfide reductase (TAIR:AT3G24170.3); Has 33740 Blast hits to 33692 proteins in 3140 species: Archae - 759; Bacteria - 24408; Metazoa - 813; Fungi - 438; Plants - 579; Viruses - 0; Other Eukaryotes - 6743 (source: NCBI BLink). & (loc_os02g56850.3 : 219.0) no description available & (ipr004099 : 77.18928) Pyridine nucleotide-disulphide oxidoreductase, dimerisation & (reliability: 444.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51055 PE=3 SV=1)'" P '21.4' 'redox.glutaredoxins' 'tr|b7gdy5|b7gdy5_phatc' "'(gnl|cdd|48634 : 114.0) no description available & (gnl|cdd|36963 : 111.0) no description available & (loc_os06g44910.1 : 100.0) no description available & (at5g20500 : 99.4) Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Glutaredoxin active site (InterPro:IPR011767), Glutaredoxin, eukaryotic/virial (InterPro:IPR011899), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT1G77370.1); Has 5770 Blast hits to 5765 proteins in 1222 species: Archae - 22; Bacteria - 2763; Metazoa - 448; Fungi - 348; Plants - 743; Viruses - 110; Other Eukaryotes - 1336 (source: NCBI BLink). & (p55143|glrx_ricco : 89.7) Glutaredoxin - Ricinus communis (Castor bean) & (chl4|513905 : 89.4) no description available & (ipr012335 : 72.347725) no description available & (reliability: 198.8) & (original description: Glutaredoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GLRX1 PE=4 SV=1)'" P '21.5' 'redox.peroxiredoxin' 'tr|b7g442|b7g442_phatc' "'(at3g26060 : 155.0) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (loc_os06g09610.1 : 154.0) no description available & (gnl|cdd|31418 : 134.0) no description available & (gnl|cdd|36073 : 134.0) no description available & (chl4|509664 : 103.0) no description available & (ipr012335 : 79.75757) no description available & (p52572|rehy_horvu : 54.3) Probable peroxiredoxin (EC 1.11.1.15) (Thioredoxin peroxidase) (Rehydrin homolog) (B15C) - Hordeum vulgare (Barley) & (reliability: 310.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21736 PE=4 SV=1)'" P '21.5' 'redox.peroxiredoxin' 'tr|b7g6x0|b7g6x0_phatc' "'(gnl|cdd|31022 : 214.0) no description available & (chl4|510228 : 131.0) no description available & (gnl|cdd|35761 : 127.0) no description available & (loc_os06g42000.1 : 114.0) no description available & (at3g52960 : 111.0) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: defense response to bacterium, peptidyl-cysteine S-nitrosylation; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 1 (TAIR:AT1G65980.1); Has 4202 Blast hits to 4202 proteins in 933 species: Archae - 58; Bacteria - 1639; Metazoa - 177; Fungi - 321; Plants - 255; Viruses - 0; Other Eukaryotes - 1752 (source: NCBI BLink). & (ipr012335 : 104.9634) no description available & (reliability: 222.0) & (original description: Peroxiredoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22388 PE=4 SV=1)'" P '21.5' 'redox.peroxiredoxin' 'tr|b7g0f8|b7g0f8_phatc' "'(gnl|cdd|48566 : 142.0) no description available & (ipr012335 : 81.93755) no description available & (at3g26060 : 78.6) encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus; ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1). & (loc_os06g09610.1 : 74.3) no description available & (gnl|cdd|36073 : 72.1) no description available & (chl4|509664 : 63.2) no description available & (q96468|bas1_horvu : 53.9) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (reliability: 157.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46206 PE=4 SV=1)'" P '21.5' 'redox.peroxiredoxin' 'tr|b7g753|b7g753_phatc' "'(gnl|cdd|48562 : 154.0) no description available & (gnl|cdd|35761 : 139.0) no description available & (loc_os01g48420.1 : 124.0) no description available & (at1g65980 : 119.0) thioredoxin-dependent peroxidase; thioredoxin-dependent peroxidase 1 (TPX1); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: thioredoxin-dependent peroxidase 2 (TAIR:AT1G65970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|510228 : 107.0) no description available & (ipr012335 : 92.23124) no description available & (p52572|rehy_horvu : 49.3) Probable peroxiredoxin (EC 1.11.1.15) (Thioredoxin peroxidase) (Rehydrin homolog) (B15C) - Hordeum vulgare (Barley) & (reliability: 238.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56578 PE=4 SV=1)'" P '21.6' 'redox.dismutases and catalases' 'tr|b7ga12|b7ga12_phatc' "'(gnl|cdd|84499 : 145.0) no description available & (gnl|cdd|35662 : 133.0) no description available & (p07505|sodcp_spiol : 121.0) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC 1.15.1.1) - Spinacia oleracea (Spinach) & (loc_os03g22810.1 : 117.0) no description available & (at1g08830 : 113.0) Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress.; copper/zinc superoxide dismutase 1 (CSD1); CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 4705 Blast hits to 4689 proteins in 1491 species: Archae - 6; Bacteria - 2000; Metazoa - 1249; Fungi - 303; Plants - 666; Viruses - 142; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr001424 : 104.69514) Superoxide dismutase, copper/zinc binding & (reliability: 409.2165) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15852 PE=4 SV=1)'" P '21.6' 'redox.dismutases and catalases' 'tr|b7g713|b7g713_phatc' "'(ipr018028 : 1500.0) Catalase, mono-functional, haem-containing & (gnl|cdd|35270 : 699.0) no description available & (gnl|cdd|29422 : 679.0) no description available & (p30567|cata2_goshi : 379.0) Catalase isozyme 2 (EC 1.11.1.6) - Gossypium hirsutum (Upland cotton) & (at1g20630 : 377.0) Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.; catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (chl4|526443 : 374.0) no description available & (loc_os03g03910.1 : 368.0) no description available & (reliability: 754.0) & (original description: Catalase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22418 PE=3 SV=1)'" P '21.6' 'redox.dismutases and catalases' 'tr|b7g0l6|b7g0l6_phatc' "'(gnl|cdd|30950 : 232.0) no description available & (gnl|cdd|36094 : 199.0) no description available & (q42684|sodm_chlre : 192.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Chlamydomonas reinhardtii & (chl4|518898 : 192.0) no description available & (at3g10920 : 163.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g25850.1 : 160.0) no description available & (ipr019832 : 79.67419) Manganese/iron superoxide dismutase, C-terminal & (reliability: 326.0) & (original description: Superoxide dismutase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SOD1 PE=3 SV=1)'" P '21.99' 'redox.misc' 'tr|b7g7m5|b7g7m5_phatc' "'(gnl|cdd|35754 : 168.0) no description available & (at5g17770 : 127.0) Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.; NADH:cytochrome B5 reductase 1 (CBR); FUNCTIONS IN: cytochrome-b5 reductase activity; INVOLVED IN: electron transport chain; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADH:cytochrome b5 reductase (CBR) (InterPro:IPR001834); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase (TAIR:AT5G20080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g07910.1 : 124.0) no description available & (chl4|511852 : 117.0) no description available & (p27967|nia1_horvu : 113.0) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) - Hordeum vulgare (Barley) & (gnl|cdd|84583 : 98.4) no description available & (ipr001433 : 44.593086) Oxidoreductase FAD/NAD(P)-binding & (reliability: 254.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29658 PE=4 SV=1)'" P '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'tr|b7fpj4|b7fpj4_phatc' '(gnl|cdd|80755 : 92.9) no description available & (gnl|cdd|36775 : 65.7) no description available & (q9ztr1|spd1_pea : 61.6) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Pisum sativum (Garden pea) & (loc_os02g15550.1 : 60.8) no description available & (at1g70310 : 58.5) Spermidine synthase.; spermidine synthase 2 (SPDS2); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 5357 Blast hits to 5354 proteins in 1531 species: Archae - 177; Bacteria - 2946; Metazoa - 372; Fungi - 210; Plants - 425; Viruses - 0; Other Eukaryotes - 1227 (source: NCBI BLink). & (chl4|514077 : 40.0) no description available & (ipr001045 : 38.31104) Spermidine/spermine synthases family & (reliability: 117.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42788 PE=4 SV=1)' P '22.1.6' 'polyamine metabolism.synthesis.spermidine synthase' 'tr|b7gds3|b7gds3_phatc' '(gnl|cdd|36775 : 344.0) no description available & (gnl|cdd|85532 : 310.0) no description available & (q9smb1|spd1_orysa : 299.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (loc_os07g22600.1 : 299.0) no description available & (at1g70310 : 295.0) Spermidine synthase.; spermidine synthase 2 (SPDS2); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 5357 Blast hits to 5354 proteins in 1531 species: Archae - 177; Bacteria - 2946; Metazoa - 372; Fungi - 210; Plants - 425; Viruses - 0; Other Eukaryotes - 1227 (source: NCBI BLink). & (chl4|514077 : 286.0) no description available & (ipr001045 : 195.13194) Spermidine/spermine synthases family & (reliability: 590.0) & (original description: Spermine/spermidine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55177 PE=3 SV=1)' P '22.1.7' 'polyamine metabolism.synthesis.spermine synthase' 'tr|b7gds3|b7gds3_phatc' '(gnl|cdd|36775 : 344.0) no description available & (gnl|cdd|85532 : 310.0) no description available & (q9smb1|spd1_orysa : 299.0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine aminopropyltransferase 1) (SPDSY 1) - Oryza sativa (Rice) & (loc_os07g22600.1 : 299.0) no description available & (at1g70310 : 295.0) Spermidine synthase.; spermidine synthase 2 (SPDS2); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 1 (TAIR:AT1G23820.1); Has 5357 Blast hits to 5354 proteins in 1531 species: Archae - 177; Bacteria - 2946; Metazoa - 372; Fungi - 210; Plants - 425; Viruses - 0; Other Eukaryotes - 1227 (source: NCBI BLink). & (chl4|514077 : 286.0) no description available & (ipr001045 : 195.13194) Spermidine/spermine synthases family & (reliability: 542.0) & (original description: Spermine/spermidine synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55177 PE=3 SV=1)' P '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'tr|b7g8w8|b7g8w8_phatc' "'(gnl|cdd|35591 : 1790.0) no description available & (ipr013816 : 1500.0) ATP-grasp fold, subdomain 2 & (gnl|cdd|81506 : 1199.0) no description available & (at1g29900 : 687.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (loc_os01g38970.1 : 662.0) no description available & (chl4|520315 : 661.0) no description available & (q42777|mcca_soybn : 38.5) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Glycine max (Soybean) & (reliability: 1374.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CPS-II PE=3 SV=1)'" P '23.1.1.1' 'nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase' 'tr|b7geg8|b7geg8_phatc' "'(gnl|cdd|35591 : 1860.0) no description available & (ipr013816 : 1500.0) ATP-grasp fold, subdomain 2 & (gnl|cdd|81506 : 1287.0) no description available & (at1g29900 : 765.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (loc_os01g38970.1 : 757.0) no description available & (chl4|520315 : 733.0) no description available & (q2qmg2|mcca_orysa : 36.2) Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) - Oryza sativa (Rice) & (reliability: 1530.0) & (original description: CPS III, carbamoyl-phosphate synthase mitochindrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24195 PE=3 SV=1)'" P '23.1.1.10' 'nucleotide metabolism.synthesis.pyrimidine.CTP synthetase' 'tr|b7gcp7|b7gcp7_phatc' "'(gnl|cdd|37598 : 778.0) no description available & (gnl|cdd|81555 : 709.0) no description available & (at4g02120 : 659.0) CTP synthase family protein; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), CTP synthase (InterPro:IPR004468), CTP synthase, N-terminal (InterPro:IPR017456), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: CTP synthase family protein (TAIR:AT3G12670.1); Has 10891 Blast hits to 10859 proteins in 2938 species: Archae - 237; Bacteria - 5545; Metazoa - 255; Fungi - 228; Plants - 170; Viruses - 0; Other Eukaryotes - 4456 (source: NCBI BLink). & (loc_os01g43020.1 : 647.0) no description available & (chl4|526213 : 270.0) no description available & (ipr017456 : 265.7389) CTP synthase, N-terminal & (reliability: 1318.0) & (original description: CTP synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50034 PE=3 SV=1)'" P '23.1.1.3' 'nucleotide metabolism.synthesis.pyrimidine.dihydroorotase' 'tr|b7fwu0|b7fwu0_phatc' "'(gnl|cdd|81600 : 518.0) no description available & (at4g22930 : 374.0) Encodes dihydroorotase (PYR4).; pyrimidin 4 (PYR4); FUNCTIONS IN: dihydroorotase activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, pyrimidine base biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dihydroorotase, conserved site (InterPro:IPR002195), Dihydroorotase homodimeric type (InterPro:IPR004721), Amidohydrolase 1 (InterPro:IPR006680); Has 3373 Blast hits to 3371 proteins in 1108 species: Archae - 32; Bacteria - 2225; Metazoa - 2; Fungi - 146; Plants - 54; Viruses - 0; Other Eukaryotes - 914 (source: NCBI BLink). & (loc_os01g54370.1 : 368.0) no description available & (chl4|512142 : 347.0) no description available & (gnl|cdd|38113 : 318.0) no description available & (reliability: 748.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19692 PE=4 SV=1)'" P '23.1.1.5' 'nucleotide metabolism.synthesis.pyrimidine.orotate phosphoribosyltransferase' 'tr|b7fwt1|b7fwt1_phatc' "'(gnl|cdd|80532 : 215.0) no description available & (ipr013785 : 144.88054) Aldolase-type TIM barrel & (gnl|cdd|36591 : 134.0) no description available & (q42942|pyr5_tobac : 66.6) Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRTase); Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)] (Fragment) - Nicotiana tabacum (Common tobacco) & (at3g54470 : 65.9) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis; uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS); FUNCTIONS IN: orotate phosphoribosyltransferase activity, orotidine-5'-phosphate decarboxylase activity; INVOLVED IN: response to cadmium ion, cellular response to phosphate starvation, pyrimidine ribonucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Orotidine 5'-phosphate decarboxylase, subfamily 1, core (InterPro:IPR014732), Orotidine 5'-phosphate decarboxylase, active site (InterPro:IPR018089), Ribulose-phosphate binding barrel (InterPro:IPR011060), Phosphoribosyltransferase (InterPro:IPR000836), Orotate phosphoribosyl transferase (InterPro:IPR004467), Orotidine 5'-phosphate decarboxylase, core (InterPro:IPR001754); Has 9174 Blast hits to 9124 proteins in 2964 species: Archae - 386; Bacteria - 5538; Metazoa - 208; Fungi - 955; Plants - 89; Viruses - 3; Other Eukaryotes - 1995 (source: NCBI BLink). & (loc_os01g72240.1 : 59.3) no description available & (chl4|511635 : 57.4) no description available & (reliability: 131.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56623 PE=3 SV=1)'" P '23.1.2.2' 'nucleotide metabolism.synthesis.purine.GAR Synthetase' 'tr|b7g2b9|b7g2b9_phatc' "'(gnl|cdd|80769 : 511.0) no description available & (gnl|cdd|35458 : 470.0) no description available & (at1g09830 : 323.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (loc_os08g09210.2 : 317.0) no description available & (chl4|521748 : 313.0) no description available & (p52424|pur5_vigun : 281.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (ipr020561 : 167.2558) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain & (reliability: 646.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47067 PE=3 SV=1)'" P '23.1.2.20' 'nucleotide metabolism.synthesis.purine.adenylosuccinate synthase' 'sp|b7fum7|pura_phatc' "'(ipr001114 : 1500.0) Adenylosuccinate synthetase & (gnl|cdd|84969 : 600.0) no description available & (gnl|cdd|36569 : 551.0) no description available & (loc_os03g49220.1 : 442.0) no description available & (chl4|517811 : 438.0) no description available & (at3g57610 : 437.0) encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate); adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink). & (o24396|pura_wheat : 427.0) Adenylosuccinate synthetase, chloroplast precursor (EC 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) - Triticum aestivum (Wheat) & (reliability: 3499.0) & (original description: Adenylosuccinate synthetase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26256 PE=3 SV=1)'" P '23.1.2.30' 'nucleotide metabolism.synthesis.purine.IMP dehydrogenase' 'tr|b7fp55|b7fp55_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|37761 : 580.0) no description available & (gnl|cdd|84798 : 532.0) no description available & (chl4|515255 : 436.0) no description available & (loc_os03g56800.1 : 372.0) no description available & (at1g79470 : 363.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: IMP dehydrogenase activity, oxidoreductase activity, catalytic activity; INVOLVED IN: oxidation reduction, GMP biosynthetic process, metabolic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IMP dehydrogenase (InterPro:IPR005990), IMP dehydrogenase related (InterPro:IPR018529), Aldolase-type TIM barrel (InterPro:IPR013785), IMP dehydrogenase/GMP reductase (InterPro:IPR001093), IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT1G16350.1); Has 13395 Blast hits to 12591 proteins in 2701 species: Archae - 175; Bacteria - 7357; Metazoa - 460; Fungi - 182; Plants - 88; Viruses - 2; Other Eukaryotes - 5131 (source: NCBI BLink). & (reliability: 726.0) & (original description: Inosine-5'-monophosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31718 PE=3 SV=1)'" P '23.1.2.31' 'nucleotide metabolism.synthesis.purine.GMP synthetase' 'tr|b7g0i5|b7g0i5_phatc' "'(gnl|cdd|80492 : 812.0) no description available & (gnl|cdd|36835 : 554.0) no description available & (loc_os08g23730.1 : 488.0) no description available & (at1g63660 : 478.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|518828 : 478.0) no description available & (ipr014729 : 118.08577) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 1086.4218) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27735 PE=3 SV=1)'" P '23.1.2.4' 'nucleotide metabolism.synthesis.purine.FGAR amidotransferase' 'tr|b7fqe5|b7fqe5_phatc' "'(gnl|cdd|37118 : 1553.0) no description available & (at1g74260 : 1445.0) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.; purine biosynthesis 4 (PUR4); FUNCTIONS IN: phosphoribosylformylglycinamidine synthase activity, catalytic activity, ATP binding; INVOLVED IN: microgametogenesis, pollen development; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PurM, N-terminal-like (InterPro:IPR016188), Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria (InterPro:IPR010073), AIR synthase related protein (InterPro:IPR000728), AIR synthase related protein, C-terminal (InterPro:IPR010918), Glutamine amidotransferase type 1 (InterPro:IPR017926); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g66500.1 : 1439.0) no description available & (gnl|cdd|81507 : 1379.0) no description available & (chl4|525320 : 1351.0) no description available & (ipr010918 : 37.272144) AIR synthase-related protein, C-terminal domain & (reliability: 2890.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17772 PE=3 SV=1)'" P '23.1.2.5' 'nucleotide metabolism.synthesis.purine.AIR synthase' 'tr|b7g2b9|b7g2b9_phatc' "'(gnl|cdd|80769 : 511.0) no description available & (gnl|cdd|35458 : 470.0) no description available & (at1g09830 : 323.0) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide; Glycinamide ribonucleotide (GAR) synthetase; FUNCTIONS IN: phosphoribosylamine-glycine ligase activity; INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosylglycinamide synthetase, conserved site (InterPro:IPR020559), Phosphoribosylglycinamide synthetase, C-domain (InterPro:IPR020560), Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain (InterPro:IPR020561), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Phosphoribosylglycinamide synthetase, N-domain (InterPro:IPR020562), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054), Phosphoribosylglycinamide synthetase (InterPro:IPR000115); Has 12648 Blast hits to 12644 proteins in 2666 species: Archae - 340; Bacteria - 7373; Metazoa - 216; Fungi - 226; Plants - 88; Viruses - 0; Other Eukaryotes - 4405 (source: NCBI BLink). & (loc_os08g09210.2 : 317.0) no description available & (chl4|521748 : 313.0) no description available & (p52424|pur5_vigun : 281.0) Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast/mitochondrial precursor (EC 6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (VUpur5) - Vigna unguiculata (Cowpea) & (ipr020561 : 167.2558) Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain & (reliability: 584.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47067 PE=3 SV=1)'" P '23.1.2.6' 'nucleotide metabolism.synthesis.purine.AIR carboxylase' 'tr|b7fs21|b7fs21_phatc' "'(loc_os01g10280.2 : 442.0) no description available & (at2g37690 : 424.0) phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative; FUNCTIONS IN: phosphoribosylaminoimidazole carboxylase activity, catalytic activity, ATP binding; INVOLVED IN: 'de novo' IMP biosynthetic process, pollen development; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Phosphoribosylaminoimidazole carboxylase (InterPro:IPR016301), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (InterPro:IPR003135), Phosphoribosylaminoimidazole carboxylase, ATPase subunit (InterPro:IPR005875), 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (InterPro:IPR000031), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), Rudiment single hybrid motif (InterPro:IPR011054); BEST Arabidopsis thaliana protein match is: phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein (TAIR:AT2G05140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|512914 : 404.0) no description available & (gnl|cdd|30376 : 354.0) no description available & (gnl|cdd|38046 : 220.0) no description available & (ipr000031 : 167.75224) N5-carboxyaminoimidazole ribonucleotide mutase PurE domain & (reliability: 848.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56626 PE=3 SV=1)'" P '23.1.2.9' 'nucleotide metabolism.synthesis.purine.AICAR transformylase' 'tr|b7gbn9|b7gbn9_phatc' "'(gnl|cdd|37766 : 621.0) no description available & (gnl|cdd|30487 : 535.0) no description available & (ipr013982 : 205.3456) no description available & (at2g35040 : 202.0) AICARFT/IMPCHase bienzyme family protein; FUNCTIONS IN: phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; INVOLVED IN: response to cold, purine nucleotide biosynthetic process; LOCATED IN: stromule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AICARFT/IMPCHase bienzyme, transformylase domain (InterPro:IPR013982), AICARFT/IMPCHase bienzyme (InterPro:IPR002695), MGS-like (InterPro:IPR011607). & (loc_os08g10570.2 : 201.0) no description available & (chl4|524161 : 82.4) no description available & (reliability: 404.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23429 PE=3 SV=1)'" P '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'tr|b7fqv1|b7fqv1_phatc' "'(gnl|cdd|30810 : 353.0) no description available & (gnl|cdd|36661 : 296.0) no description available & (at2g35390 : 241.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q9xg99|kprs2_spiol : 241.0) Ribose-phosphate pyrophosphokinase 2, chloroplast precursor (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Spinacia oleracea (Spinach) & (chl4|525622 : 240.0) no description available & (loc_os02g03540.1 : 230.0) no description available & (reliability: 482.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32326 PE=4 SV=1)'" P '23.1.3' 'nucleotide metabolism.synthesis.PRS-PP' 'tr|b7g1i1|b7g1i1_phatc' "'(gnl|cdd|30810 : 262.0) no description available & (gnl|cdd|36661 : 208.0) no description available & (at2g35390 : 174.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|525622 : 172.0) no description available & (q69xq6|kprs2_orysa : 166.0) Ribose-phosphate pyrophosphokinase 2 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 2) - Oryza sativa (Rice) & (loc_os06g41360.2 : 166.0) no description available & (reliability: 348.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4059 PE=4 SV=1)'" P '23.2' 'nucleotide metabolism.degradation' 'tr|b7g802|b7g802_phatc' "'(gnl|cdd|29760 : 215.0) no description available & (gnl|cdd|36812 : 182.0) no description available & (loc_os01g64520.1 : 166.0) no description available & (o04104|uric2_soybn : 163.0) Uricase-2 isozyme 2 (EC 1.7.3.3) (Uricase II isozyme 2) (Urate oxidase) (Nodulin 35) (N-35) (Non-symbiotic uricase) - Glycine max (Soybean) & (at2g26230 : 157.0) uricase / urate oxidase / nodulin 35, putative; FUNCTIONS IN: urate oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, purine base metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uricase, conserved site (InterPro:IPR019842), Uricase (InterPro:IPR002042); Has 677 Blast hits to 673 proteins in 262 species: Archae - 5; Bacteria - 239; Metazoa - 140; Fungi - 185; Plants - 90; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (ipr002042 : 156.64836) Uricase & (chl4|512950 : 143.0) no description available & (reliability: 588.13464) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29736 PE=4 SV=1)'" P '23.2' 'nucleotide metabolism.degradation' 'tr|b7fv38|b7fv38_phatc' '(gnl|cdd|36600 : 251.0) no description available & (gnl|cdd|85272 : 228.0) no description available & (ipr000407 : 164.30452) Nucleoside phosphatase GDA1/CD39 & (at1g14240 : 149.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os08g33850.1 : 144.0) no description available & (p80595|apy_soltu : 105.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (chl4|523335 : 102.0) no description available & (reliability: 298.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44968 PE=3 SV=1)' P '23.2.1.3' 'nucleotide metabolism.degradation.pyrimidine.dihydrouracil dehydrogenase' 'tr|b7g610|b7g610_phatc' "'(gnl|cdd|80999 : 305.0) no description available & (gnl|cdd|36649 : 175.0) no description available & (ipr013785 : 147.36545) Aldolase-type TIM barrel & (loc_os02g50350.1 : 50.4) no description available & (chl4|518196 : 41.2) no description available & (at3g17810 : 40.8) Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.; pyrimidine 1 (PYD1); FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, dihydropyrimidine dehydrogenase (NADP+) activity; INVOLVED IN: 'de novo' pyrimidine base biosynthetic process, uracil catabolic process, cellular response to nitrogen levels; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydroorotate dehydrogenase, class 1/ 2 (InterPro:IPR012135), Dihydroorotate dehydrogenase, class 1, core (InterPro:IPR005720); Has 5953 Blast hits to 5953 proteins in 1914 species: Archae - 176; Bacteria - 4342; Metazoa - 263; Fungi - 99; Plants - 89; Viruses - 0; Other Eukaryotes - 984 (source: NCBI BLink). & (reliability: 81.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48112 PE=4 SV=1)'" P '23.3.1.1' 'nucleotide metabolism.salvage.phosphoribosyltransferases.aprt' 'tr|b7g7k1|b7g7k1_phatc' "'(gnl|cdd|80977 : 158.0) no description available & (gnl|cdd|36924 : 151.0) no description available & (at1g80050 : 126.0) Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol.; adenine phosphoribosyl transferase 2 (APT2); FUNCTIONS IN: phosphate transmembrane transporter activity, adenine phosphoribosyltransferase activity; INVOLVED IN: adenine salvage; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyltransferase 5 (TAIR:AT5G11160.1); Has 8411 Blast hits to 8411 proteins in 2474 species: Archae - 199; Bacteria - 5670; Metazoa - 171; Fungi - 181; Plants - 165; Viruses - 0; Other Eukaryotes - 2025 (source: NCBI BLink). & (loc_os12g39860.1 : 117.0) no description available & (q43199|apt1_wheat : 116.0) Adenine phosphoribosyltransferase 1 (EC 2.4.2.7) (APRT 1) - Triticum aestivum (Wheat) & (chl4|517180 : 108.0) no description available & (ipr000836 : 41.110058) Phosphoribosyltransferase domain & (reliability: 252.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_6834 PE=4 SV=1)'" P '23.3.2.1' 'nucleotide metabolism.salvage.nucleoside kinases.adenosine kinase' 'tr|b7gce4|b7gce4_phatc' "'(gnl|cdd|38065 : 364.0) no description available & (at3g09820 : 318.0) Involved in the salvage synthesis of adenylates and methyl recycling; adenosine kinase 1 (ADK1); FUNCTIONS IN: adenosine kinase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to trehalose-6-phosphate stimulus, adenosine salvage; LOCATED IN: cytosol, apoplast, plasma membrane, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 2 (TAIR:AT5G03300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o49923|adk_phypa : 314.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (gnl|cdd|29352 : 305.0) no description available & (loc_os02g41590.1 : 305.0) no description available & (ipr011611 : 143.78192) PfkB & (chl4|521594 : 122.0) no description available & (reliability: 636.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51242 PE=4 SV=1)'" P '23.3.2.2' 'nucleotide metabolism.salvage.nucleoside kinases.uridine kinase' 'tr|b7s4d8|b7s4d8_phatc' "'(gnl|cdd|82901 : 141.0) no description available & (gnl|cdd|37913 : 133.0) no description available & (at1g03030 : 117.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink). & (loc_os12g40880.1 : 115.0) no description available & (chl4|519005 : 87.8) no description available & (reliability: 234.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1463 PE=4 SV=1)'" P '23.4.1' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.adenylate kinase' 'tr|b7g015|b7g015_phatc' "'(gnl|cdd|80603 : 255.0) no description available & (gnl|cdd|38288 : 190.0) no description available & (chl4|514060 : 166.0) no description available & (q08479|kad1_orysa : 164.0) Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Oryza sativa (Rice) & (loc_os12g13380.1 : 164.0) no description available & (at5g63400 : 161.0) encodes a protein similar to adenylate kinase.; adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink). & (ipr000850 : 108.30488) Adenylate kinase & (reliability: 322.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12732 PE=3 SV=1)'" P '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'tr|b7g2s9|b7g2s9_phatc' "'(gnl|cdd|58528 : 225.0) no description available & (p93554|ndk1_sacof : 208.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) (PP18) - Saccharum officinarum (Sugarcane) & (at4g09320 : 207.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36106 : 202.0) no description available & (chl4|516027 : 201.0) no description available & (loc_os10g41410.2 : 199.0) no description available & (ipr001564 : 147.27014) Nucleoside diphosphate kinase & (reliability: 414.0) & (original description: Nucleoside diphosphate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NDK2 PE=3 SV=1)'" P '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'tr|b7fpe8|b7fpe8_phatc' "'(gnl|cdd|58528 : 230.0) no description available & (loc_os10g41410.2 : 199.0) no description available & (gnl|cdd|36106 : 198.0) no description available & (chl4|516027 : 197.0) no description available & (q852s5|ndk2_tobac : 196.0) Nucleoside diphosphate kinase 2, chloroplast precursor (EC 2.7.4.6) (Nucleoside diphosphate kinase II) (NDK II) (NDP kinase II) (NDPK II) - Nicotiana tabacum (Common tobacco) & (at5g63310 : 192.0) Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.; nucleoside diphosphate kinase 2 (NDPK2); FUNCTIONS IN: nucleoside diphosphate kinase activity, protein binding, ATP binding; INVOLVED IN: response to UV, auxin mediated signaling pathway, response to hydrogen peroxide, red, far-red light phototransduction; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: Nucleoside diphosphate kinase family protein (TAIR:AT4G09320.1); Has 9088 Blast hits to 8922 proteins in 2598 species: Archae - 291; Bacteria - 4641; Metazoa - 1094; Fungi - 170; Plants - 375; Viruses - 117; Other Eukaryotes - 2400 (source: NCBI BLink). & (ipr001564 : 149.68823) Nucleoside diphosphate kinase & (reliability: 384.0) & (original description: Nucleoside diphosphate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NDK1 PE=3 SV=1)'" P '23.4.10' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.nucleoside diphosphate kinase' 'tr|b7fr80|b7fr80_phatc' "'(gnl|cdd|79568 : 223.0) no description available & (q02254|ndk1_spiol : 192.0) Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I) - Spinacia oleracea (Spinach) & (at4g09320 : 190.0) nucleoside diphosphate kinase type 1 (NDPK1) gene, complete; NDPK1; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: apoplast, peroxisome, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 3 (TAIR:AT4G11010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36106 : 190.0) no description available & (chl4|520249 : 189.0) no description available & (loc_os10g41410.2 : 186.0) no description available & (ipr001564 : 133.07993) Nucleoside diphosphate kinase & (reliability: 380.0) & (original description: Nucleoside diphosphate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NDK3 PE=3 SV=1)'" P '23.4.3' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.uridylate kinase' 'tr|b7s454|b7s454_phatc' "'(gnl|cdd|38289 : 210.0) no description available & (at5g26667 : 180.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (gnl|cdd|30189 : 176.0) no description available & (loc_os02g53790.1 : 173.0) no description available & (chl4|511221 : 167.0) no description available & (ipr000850 : 89.158966) Adenylate kinase & (p43188|kadc_maize : 87.8) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 360.0) & (original description: UMP-CMP kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1367 PE=3 SV=1)'" P '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'tr|b7g529|b7g529_phatc' "'(gnl|cdd|36839 : 243.0) no description available & (at5g09650 : 231.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (loc_os02g52940.2 : 223.0) no description available & (q93y52|ipyr1_chlre : 222.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (chl4|509704 : 222.0) no description available & (ipr008162 : 183.2513) Inorganic pyrophosphatase & (gnl|cdd|29533 : 163.0) no description available & (reliability: 462.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14529 PE=4 SV=1)'" P '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'tr|b7ft09|b7ft09_phatc' "'(gnl|cdd|36839 : 243.0) no description available & (loc_os02g52940.2 : 212.0) no description available & (at5g09650 : 206.0) Encodes a protein with inorganic pyrophosphatase activity.; pyrophosphorylase 6 (PPa6); FUNCTIONS IN: inorganic diphosphatase activity, pyrophosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, membrane, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic pyrophosphatase (InterPro:IPR008162); BEST Arabidopsis thaliana protein match is: pyrophosphorylase 5 (TAIR:AT4G01480.1); Has 4681 Blast hits to 4677 proteins in 1304 species: Archae - 167; Bacteria - 3164; Metazoa - 258; Fungi - 287; Plants - 274; Viruses - 0; Other Eukaryotes - 531 (source: NCBI BLink). & (q93y52|ipyr1_chlre : 206.0) Soluble inorganic pyrophosphatase 1, chloroplast precursor (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase 1) (PPase 1) - Chlamydomonas reinhardtii & (chl4|509704 : 206.0) no description available & (gnl|cdd|29533 : 168.0) no description available & (ipr008162 : 166.1572) Inorganic pyrophosphatase & (reliability: 412.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32923 PE=4 SV=1)'" P '23.4.99' 'nucleotide metabolism.phosphotransfer and pyrophosphatases.misc' 'tr|b7fr48|b7fr48_phatc' "'(gnl|cdd|58616 : 298.0) no description available & (ipr001048 : 210.92154) Aspartate/glutamate/uridylate kinase & (chl4|510915 : 173.0) no description available & (loc_os04g46460.2 : 169.0) no description available & (at3g57560 : 165.0) encodes a N-acetylglutamate kinase, involved in arginine biosynthesis; N-acetyl-l-glutamate kinase (NAGK); FUNCTIONS IN: acetylglutamate kinase activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglutamate kinase (InterPro:IPR011148), Glutamate 5-kinase (InterPro:IPR001057), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Acetylglutamate kinase (InterPro:IPR004662); BEST Arabidopsis thaliana protein match is: N-acetyl-l-glutamate synthase 2 (TAIR:AT4G37670.2); Has 9387 Blast hits to 9387 proteins in 2227 species: Archae - 281; Bacteria - 6131; Metazoa - 9; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 2686 (source: NCBI BLink). & (gnl|cdd|37647 : 116.0) no description available & (reliability: 330.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43249 PE=3 SV=1)'" P '23.5' 'nucleotide metabolism.deoxynucleotide metabolism' 'tr|b7fpb6|b7fpb6_phatc' "'(ipr000788 : 1500.0) Ribonucleotide reductase large subunit, C-terminal & (gnl|cdd|36328 : 1317.0) no description available & (at2g21790 : 1116.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (loc_os06g07210.1 : 1104.0) no description available & (chl4|512694 : 1079.0) no description available & (gnl|cdd|86154 : 752.0) no description available & (reliability: 2625.0) & (original description: Ribonucleoside-diphosphate reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42726 PE=3 SV=1)'" P '23.5.3' 'nucleotide metabolism.deoxynucleotide metabolism.cytosine deaminase' 'tr|b7g1w7|b7g1w7_phatc' "'(gnl|cdd|30466 : 85.3) no description available & (at4g20960 : 52.8) encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis; Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|514027 : 49.3) no description available & (loc_os04g09810.1 : 48.9) no description available & (gnl|cdd|36236 : 43.4) no description available & (reliability: 105.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46623 PE=4 SV=1)'" P '24.1' 'Biodegradation of Xenobiotics.hydroxyacylglutathione hydrolase' 'tr|b7gdi2|b7gdi2_phatc' "'(gnl|cdd|36032 : 296.0) no description available & (loc_os01g47690.1 : 268.0) no description available & (at1g53580 : 254.0) Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.; glyoxalase II 3 (GLY3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, hydroxyacylglutathione hydrolase activity; INVOLVED IN: response to salt stress, methylglyoxal catabolic process to D-lactate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: Metallo-hydrolase/oxidoreductase superfamily protein (TAIR:AT3G10850.1); Has 13580 Blast hits to 13577 proteins in 2470 species: Archae - 281; Bacteria - 8959; Metazoa - 398; Fungi - 229; Plants - 189; Viruses - 0; Other Eukaryotes - 3524 (source: NCBI BLink). & (gnl|cdd|30837 : 101.0) no description available & (chl4|514062 : 70.5) no description available & (ipr001279 : 40.416912) Beta-lactamase-like & (reliability: 508.0) & (original description: Glyoxalase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GLO_1 PE=4 SV=1)'" P '24.2' 'Biodegradation of Xenobiotics.lactoylglutathione lyase' 'tr|b7g085|b7g085_phatc' "'(gnl|cdd|38155 : 135.0) no description available & (chl4|521973 : 131.0) no description available & (loc_os05g22970.1 : 130.0) no description available & (o49818|lgul_cicar : 125.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) - Cicer arietinum (Chickpea) (Garbanzo) & (at1g08110 : 123.0) lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN: calmodulin binding, lactoylglutathione lyase activity; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|77707 : 70.5) no description available & (reliability: 246.0) & (original description: Lactyolglutathione lyase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GLXI PE=4 SV=1)'" P '24.3' 'Biodegradation of Xenobiotics.3-hydroxybutyryl-CoA dehydrogenase' 'tr|b7g9c0|b7g9c0_phatc' "'(gnl|cdd|31442 : 327.0) no description available & (gnl|cdd|37515 : 297.0) no description available & (loc_os01g58380.1 : 219.0) no description available & (at3g15290 : 197.0) 3-hydroxyacyl-CoA dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase (InterPro:IPR022694); BEST Arabidopsis thaliana protein match is: multifunctional protein 2 (TAIR:AT3G06860.1); Has 14531 Blast hits to 13544 proteins in 1840 species: Archae - 475; Bacteria - 9128; Metazoa - 588; Fungi - 237; Plants - 152; Viruses - 0; Other Eukaryotes - 3951 (source: NCBI BLink). & (chl4|513566 : 182.0) no description available & (o49809|mfpa_brana : 159.0) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase ( & (ipr006176 : 134.8229) 3-hydroxyacyl-CoA dehydrogenase, NAD binding & (reliability: 394.0) & (original description: 3-hydroxyacyl-coenzyme A dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HAD2 PE=4 SV=1)'" P '25' 'C1-metabolism' 'tr|b7g9x0|b7g9x0_phatc' "'(ipr000559 : 1500.0) Formate-tetrahydrofolate ligase, FTHFS & (gnl|cdd|39431 : 853.0) no description available & (gnl|cdd|73210 : 802.0) no description available & (p28723|fths_spiol : 739.0) Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (10-formyletrahydrofolate synthetase) (FHS) (FTHFS) - Spinacia oleracea (Spinach) & (at1g50480 : 731.0) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete; 10-formyltetrahydrofolate synthetase (THFS); FUNCTIONS IN: formate-tetrahydrofolate ligase activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, folic acid and derivative biosynthetic process; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Formate-tetrahydrofolate ligase, FTHFS, conserved site (InterPro:IPR020628), Formate-tetrahydrofolate ligase, FTHFS (InterPro:IPR000559); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G12280.1); Has 7211 Blast hits to 7172 proteins in 1581 species: Archae - 30; Bacteria - 3794; Metazoa - 307; Fungi - 186; Plants - 64; Viruses - 0; Other Eukaryotes - 2830 (source: NCBI BLink). & (loc_os09g27420.1 : 725.0) no description available & (chl4|514243 : 705.0) no description available & (reliability: 2625.0) & (original description: Fomate-tetrahydrofolate ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FTHFS PE=3 SV=1)'" P '25' 'C1-metabolism' 'tr|b7g5z8|b7g5z8_phatc' "'(gnl|cdd|81549 : 1575.0) no description available & (ipr020580 : 1500.0) Glycine cleavage system P-protein, N-terminal & (gnl|cdd|37251 : 1353.0) no description available & (p26969|gcsp_pea : 993.0) Glycine dehydrogenase [decarboxylating], mitochondrial precursor (EC 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) - Pisum sativum (Garden pea) & (at2g26080 : 990.0) glycine decarboxylase P-protein 2 (GLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: oxidation reduction, glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein-like (InterPro:IPR020581), Glycine cleavage system P-protein (InterPro:IPR003437), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 1 (TAIR:AT4G33010.1); Has 12461 Blast hits to 11458 proteins in 1938 species: Archae - 256; Bacteria - 5279; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6474 (source: NCBI BLink). & (chl4|513576 : 969.0) no description available & (loc_os01g51410.1 : 953.0) no description available & (reliability: 1980.0) & (original description: Glycine cleavage system P protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GDCP PE=3 SV=1)'" P '25' 'C1-metabolism' 'tr|b7fqj9|b7fqj9_phatc' "'(gnl|cdd|35892 : 514.0) no description available & (gnl|cdd|84679 : 502.0) no description available & (o81395|drts_maize : 498.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Zea mays (Maize) & (loc_os11g29390.1 : 497.0) no description available & (at4g34570 : 491.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 2 (THY-2); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 13567 Blast hits to 13544 proteins in 2627 species: Archae - 73; Bacteria - 8801; Metazoa - 517; Fungi - 428; Plants - 92; Viruses - 256; Other Eukaryotes - 3400 (source: NCBI BLink). & (chl4|517417 : 431.0) no description available & (ipr000398 : 296.62802) Thymidylate synthase & (reliability: 1477.0991) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_1690 PE=3 SV=1)'" P '25.5' 'C1-metabolism.Methylenetetrahydrofolate dehydrogenase & Methenyltetrahydrofolate cyclohydrolase' 'tr|b7g8y9|b7g8y9_phatc' "'(gnl|cdd|35312 : 172.0) no description available & (gnl|cdd|30539 : 137.0) no description available & (ipr016040 : 73.755295) NAD(P)-binding domain & (loc_os02g02850.1 : 62.4) no description available & (at4g00620 : 61.2) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|517055 : 44.7) no description available & (reliability: 122.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4402 PE=4 SV=1)'" P '25.6' 'C1-metabolism.methylenetetrahydrofolate reductase' 'tr|b7gb47|b7gb47_phatc' "'(gnl|cdd|35784 : 337.0) no description available & (gnl|cdd|85914 : 304.0) no description available & (chl4|509896 : 296.0) no description available & (at2g44160 : 290.0) methylenetetrahydrofolate reductase MTHFR2 mRNA, complete; methylenetetrahydrofolate reductase 2 (MTHFR2); FUNCTIONS IN: methylenetetrahydrofolate reductase (NADPH) activity; INVOLVED IN: oxidation reduction, methionine metabolic process; EXPRESSED IN: male gametophyte, guard cell, cultured cell, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methylenetetrahydrofolate reductase (InterPro:IPR003171), Eukaryotic-type methylenetetrahydrofolate reductase (InterPro:IPR004621); BEST Arabidopsis thaliana protein match is: methylenetetrahydrofolate reductase 1 (TAIR:AT3G59970.3); Has 4605 Blast hits to 4574 proteins in 1845 species: Archae - 16; Bacteria - 3444; Metazoa - 135; Fungi - 300; Plants - 75; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). & (q75he6|mthr_orysa : 288.0) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20) - Oryza sativa (Rice) & (loc_os03g60090.1 : 288.0) no description available & (ipr003171 : 150.87201) Methylenetetrahydrofolate reductase & (reliability: 580.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30471 PE=4 SV=1)'" P '26.1' 'misc.misc2' 'tr|b7fys6|b7fys6_phatc' "'(ipr004304 : 1500.0) Acetamidase/Formamidase & (chl4|516917 : 595.0) no description available & (at4g37560 : 558.0) Acetamidase/Formamidase family protein; FUNCTIONS IN: formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetamidase/Formamidase (InterPro:IPR004304); BEST Arabidopsis thaliana protein match is: Acetamidase/Formamidase family protein (TAIR:AT4G37550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g55950.1 : 558.0) no description available & (gnl|cdd|86229 : 474.0) no description available & (reliability: 1116.0) & (original description: Formidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54476 PE=4 SV=1)'" P '26.10' 'misc.cytochrome P450' 'tr|b7fw67|b7fw67_phatc' "'(chl4|518189 : 227.0) no description available & (loc_os01g11270.1 : 224.0) no description available & (at2g28860 : 201.0) member of CYP710A; cytochrome P450, family 710, subfamily A, polypeptide 4 (CYP710A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 3 (TAIR:AT2G28850.1); Has 26515 Blast hits to 26466 proteins in 1471 species: Archae - 50; Bacteria - 2884; Metazoa - 10516; Fungi - 4738; Plants - 7451; Viruses - 0; Other Eukaryotes - 876 (source: NCBI BLink). & (gnl|cdd|35379 : 159.0) no description available & (gnl|cdd|84486 : 118.0) no description available & (ipr001128 : 113.74296) Cytochrome P450 & (p37124|c77a2_solme : 60.8) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXVIIA2) (P-450EG5) - Solanum melongena (Eggplant) (Aubergine) & (reliability: 402.0) & (original description: Cytochrome P450 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51757 PE=3 SV=1)'" P '26.11.1' 'misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase' 'tr|b7gea6|b7gea6_phatc' "'(gnl|cdd|36715 : 257.0) no description available & (chl4|512790 : 247.0) no description available & (at5g19440 : 172.0) similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase; NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to salt stress; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G51410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g34480.2 : 156.0) no description available & (p51110|dfra_vitvi : 148.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Vitis vinifera (Grape) & (gnl|cdd|30800 : 110.0) no description available & (ipr016040 : 88.11442) NAD(P)-binding domain & (reliability: 344.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50500 PE=3 SV=1)'" P '26.13' 'misc.acid and other phosphatases' 'tr|b5y3g0|b5y3g0_phatc' "'(gnl|cdd|36275 : 347.0) no description available & (at3g01310 : 300.0) Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-grasp fold, RimK-type (InterPro:IPR013651), Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT5G15070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os01g56980.1 : 293.0) no description available & (chl4|521182 : 287.0) no description available & (ipr000560 : 136.69649) Histidine phosphatase superfamily, clade-2 & (gnl|cdd|84696 : 71.7) no description available & (reliability: 586.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46684 PE=3 SV=1)'" P '26.17' 'misc.dynamin' 'tr|b7g3l7|b7g3l7_phatc' "'(gnl|cdd|35667 : 563.0) no description available & (at4g33650 : 536.0) Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.; dynamin-related protein 3A (DRP3A); CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), GTPase effector domain, GED (InterPro:IPR020850), Dynamin, GTPase region, conserved site (InterPro:IPR019762), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: dynamin related protein (TAIR:AT2G14120.1). & (loc_os01g69130.1 : 536.0) no description available & (chl4|517595 : 430.0) no description available & (gnl|cdd|64873 : 290.0) no description available & (ipr000375 : 205.37636) Dynamin central domain & (reliability: 1431.4087) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DYN1 PE=3 SV=1)'" P '26.2' 'misc.UDP glucosyl and glucoronyl transferases' 'tr|b7fnw8|b7fnw8_phatc' '(gnl|cdd|85073 : 60.1) no description available & (loc_os08g45130.1 : 37.4) no description available & (at2g30140 : 36.6) UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G30150.1); Has 7928 Blast hits to 7876 proteins in 486 species: Archae - 0; Bacteria - 504; Metazoa - 2238; Fungi - 27; Plants - 5010; Viruses - 79; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 73.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42606 PE=4 SV=1)' P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b5y4w1|b5y4w1_phatc' "'(gnl|cdd|36422 : 212.0) no description available & (gnl|cdd|81882 : 190.0) no description available & (loc_os11g07930.1 : 174.0) no description available & (at4g23430 : 156.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast, chloroplast inner membrane; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G23420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|519731 : 151.0) no description available & (ipr016040 : 124.15727) NAD(P)-binding domain & (q42850|porb_horvu : 77.8) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) & (reliability: 378.21234) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10567 PE=3 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7fsq7|b7fsq7_phatc' "'(gnl|cdd|36232 : 269.0) no description available & (at1g67730 : 256.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (loc_os04g40730.1 : 243.0) no description available & (gnl|cdd|30648 : 165.0) no description available & (ipr016040 : 121.343864) NAD(P)-binding domain & (chl4|512755 : 86.7) no description available & (q08632|sdr1_picab : 70.9) Short-chain type dehydrogenase/reductase (EC 1.-.-.-) - Picea abies (Norway spruce) (Picea excelsa) & (reliability: 490.67905) & (original description: Short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25360 PE=3 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7ftd2|b7ftd2_phatc' "'(gnl|cdd|35944 : 164.0) no description available & (gnl|cdd|81679 : 162.0) no description available & (ipr016040 : 154.09088) NAD(P)-binding domain & (at2g29320 : 113.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29300.1); Has 115907 Blast hits to 115692 proteins in 3517 species: Archae - 975; Bacteria - 76352; Metazoa - 4750; Fungi - 5727; Plants - 2476; Viruses - 5; Other Eukaryotes - 25622 (source: NCBI BLink). & (loc_os11g43200.1 : 107.0) no description available & (chl4|524254 : 100.0) no description available & (q75kh3|grdh_orysa : 97.8) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 270.06274) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25521 PE=4 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7fwv9|b7fwv9_phatc' "'(gnl|cdd|81880 : 133.0) no description available & (gnl|cdd|36419 : 114.0) no description available & (ipr016040 : 108.87543) NAD(P)-binding domain & (at1g49670 : 62.0) molecular function has not been defined. Was shown involved in oxidative stress tolerance.; NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1). & (loc_os04g32070.1 : 61.6) no description available & (chl4|525033 : 47.4) no description available & (q75kh3|grdh_orysa : 40.0) Glucose and ribitol dehydrogenase homolog (EC 1.1.1.-) - Oryza sativa (Rice) & (reliability: 165.60284) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34853 PE=3 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7fu29|b7fu29_phatc' "'(loc_os06g39040.1 : 178.0) no description available & (at4g09750 : 177.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G24050.1); Has 75095 Blast hits to 75002 proteins in 3239 species: Archae - 588; Bacteria - 48774; Metazoa - 5574; Fungi - 4887; Plants - 2346; Viruses - 0; Other Eukaryotes - 12926 (source: NCBI BLink). & (gnl|cdd|36422 : 163.0) no description available & (ipr016040 : 112.038216) NAD(P)-binding domain & (gnl|cdd|81882 : 105.0) no description available & (chl4|526035 : 68.9) no description available & (q42850|porb_horvu : 60.8) Protochlorophyllide reductase B, chloroplast precursor (EC 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) - Hordeum vulgare (Barley) & (reliability: 354.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4266 PE=4 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7fur1|b7fur1_phatc' "'(chl4|517750 : 143.0) no description available & (at5g61830 : 139.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr016040 : 130.84189) NAD(P)-binding domain & (gnl|cdd|36422 : 126.0) no description available & (loc_os02g39490.1 : 117.0) no description available & (gnl|cdd|31231 : 113.0) no description available & (q93x68|fabg5_brana : 67.0) 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 5) (Fragment) - Brassica napus (Rape) & (reliability: 278.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44630 PE=3 SV=1)'" P '26.22' 'misc.short chain dehydrogenase/reductase (SDR)' 'tr|b7fw30|b7fw30_phatc' "'(loc_os01g12710.2 : 137.0) no description available & (at4g13250 : 136.0) Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).; NON-YELLOW COLORING 1 (NYC1); CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NYC1-like (TAIR:AT5G04900.1). & (gnl|cdd|31231 : 118.0) no description available & (chl4|513219 : 117.0) no description available & (gnl|cdd|35944 : 115.0) no description available & (ipr016040 : 96.613266) NAD(P)-binding domain & (q93x68|fabg5_brana : 55.8) 3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 5) (Fragment) - Brassica napus (Rape) & (reliability: 349.77396) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44908 PE=4 SV=1)'" P '26.26.1' 'misc.aminotransferases.aminotransferase class IV family protein' 'tr|b7g3q9|b7g3q9_phatc' "'(gnl|cdd|29568 : 232.0) no description available & (gnl|cdd|36193 : 225.0) no description available & (at1g50110 : 178.0) D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: branched-chain-amino-acid transaminase activity, catalytic activity; INVOLVED IN: branched chain family amino acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544), Aminotransferase, class IV, conserved site (InterPro:IPR018300), Branched-chain amino acid aminotransferase II (InterPro:IPR005786); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT1G50090.1); Has 12195 Blast hits to 12195 proteins in 2532 species: Archae - 155; Bacteria - 7654; Metazoa - 266; Fungi - 412; Plants - 250; Viruses - 0; Other Eukaryotes - 3458 (source: NCBI BLink). & (loc_os05g48450.6 : 176.0) no description available & (chl4|522677 : 148.0) no description available & (reliability: 342.0) & (original description: Branched-chain-amino-acid aminotransferase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28585 PE=3 SV=1)'" P '26.27' 'misc.calcineurin-like phosphoesterase family protein' 'tr|b7fr35|b7fr35_phatc' "'(gnl|cdd|38535 : 214.0) no description available & (loc_os02g16550.1 : 190.0) no description available & (at3g47810 : 185.0) Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.; MAIGO 1 (MAG1); FUNCTIONS IN: hydrolase activity, acting on ester bonds, protein serine/threonine phosphatase activity; INVOLVED IN: endosome to lysosome transport, protein targeting to vacuole; LOCATED IN: microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphodiesterase MJ0936 (InterPro:IPR000979); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|512839 : 164.0) no description available & (gnl|cdd|30967 : 97.4) no description available & (reliability: 370.0) & (original description: Vacuolar protein sorting-associated protein 29 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17936 PE=3 SV=1)'" P '26.6' 'misc.O-methyl transferases' 'tr|b7g3r9|b7g3r9_phatc' "'(loc_os06g05090.1 : 306.0) no description available & (at1g04870 : 291.0) Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.; protein arginine methyltransferase 10 (PRMT10); FUNCTIONS IN: histone-arginine N-methyltransferase activity, methyltransferase activity, protein-arginine omega-N asymmetric methyltransferase activity, [myelin basic protein]-arginine N-methyltransferase activity, protein-arginine omega-N monomethyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, peptidyl-arginine methylation, to asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast hits to 3335 proteins in 890 species: Archae - 50; Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants - 354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI BLink). & (gnl|cdd|36712 : 291.0) no description available & (chl4|514070 : 273.0) no description available & (gnl|cdd|33834 : 60.0) no description available & (reliability: 582.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54710 PE=3 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7ftu0|b7ftu0_phatc' "'(gnl|cdd|36411 : 231.0) no description available & (gnl|cdd|30949 : 207.0) no description available & (loc_os03g01190.1 : 195.0) no description available & (at5g61510 : 174.0) GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr016040 : 87.929016) NAD(P)-binding domain & (chl4|516527 : 74.7) no description available & (q8h0m1|qorh_spiol : 57.8) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 348.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18893 PE=4 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7fpi2|b7fpi2_phatc' "'(gnl|cdd|47971 : 64.3) no description available & (gnl|cdd|36804 : 55.8) no description available & (at1g20270 : 52.8) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G66060.1); Has 2479 Blast hits to 2467 proteins in 338 species: Archae - 0; Bacteria - 393; Metazoa - 997; Fungi - 73; Plants - 409; Viruses - 15; Other Eukaryotes - 592 (source: NCBI BLink). & (loc_os10g35470.1 : 52.0) no description available & (chl4|520647 : 44.7) no description available & (reliability: 105.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31846 PE=4 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7fr90|b7fr90_phatc' "'(gnl|cdd|36804 : 93.2) no description available & (gnl|cdd|47971 : 83.6) no description available & (loc_os03g07000.1 : 80.5) no description available & (chl4|515514 : 75.5) no description available & (at1g20270 : 71.6) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G66060.1); Has 2479 Blast hits to 2467 proteins in 338 species: Archae - 0; Bacteria - 393; Metazoa - 997; Fungi - 73; Plants - 409; Viruses - 15; Other Eukaryotes - 592 (source: NCBI BLink). & (reliability: 143.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42426 PE=4 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7g869|b7g869_phatc' "'(gnl|cdd|36804 : 100.0) no description available & (at2g43080 : 89.4) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (gnl|cdd|47971 : 81.7) no description available & (loc_os04g27850.1 : 80.1) no description available & (chl4|520646 : 66.6) no description available & (reliability: 178.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48732 PE=4 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7gaw7|b7gaw7_phatc' "'(gnl|cdd|36804 : 119.0) no description available & (gnl|cdd|47971 : 110.0) no description available & (at2g43080 : 90.9) Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.; P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink). & (loc_os04g27850.1 : 90.1) no description available & (chl4|520646 : 75.5) no description available & (reliability: 181.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49523 PE=4 SV=1)'" P '26.7' "'misc.oxidases - copper, flavone etc'" 'tr|b7s4b2|b7s4b2_phatc' "'(gnl|cdd|30949 : 146.0) no description available & (gnl|cdd|36412 : 119.0) no description available & (q8h0m1|qorh_spiol : 73.6) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (loc_os09g32620.1 : 71.6) no description available & (at1g23740 : 64.7) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (chl4|512337 : 49.3) no description available & (ipr016040 : 35.70996) NAD(P)-binding domain & (reliability: 129.4) & (original description: Alcohol dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1820 PE=4 SV=1)'" P '26.8' "'misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases'" 'tr|b7fsu6|b7fsu6_phatc' "'(gnl|cdd|80942 : 430.0) no description available & (chl4|513150 : 417.0) no description available & (gnl|cdd|36452 : 386.0) no description available & (ipr000172 : 147.36545) Glucose-methanol-choline oxidoreductase, N-terminal & (at1g73050 : 119.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: cyanide biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT1G12570.1); Has 10851 Blast hits to 10547 proteins in 1106 species: Archae - 4; Bacteria - 3939; Metazoa - 853; Fungi - 1597; Plants - 293; Viruses - 12; Other Eukaryotes - 4153 (source: NCBI BLink). & (loc_os04g48400.1 : 113.0) no description available & (reliability: 238.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_1341 PE=4 SV=1)'" P '26.9' 'misc.glutathione S transferases' 'tr|b7g3e0|b7g3e0_phatc' "'(gnl|cdd|36908 : 93.8) no description available & (chl4|516844 : 88.2) no description available & (gnl|cdd|48588 : 76.8) no description available & (ipr012335 : 45.71523) no description available & (at1g77290 : 37.4) Glutathione S-transferase family protein; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 74.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37658 PE=4 SV=1)'" P '26.9' 'misc.glutathione S transferases' 'tr|b7g9s4|b7g9s4_phatc' "'(loc_os03g50130.1 : 52.0) no description available & (at1g65820 : 50.1) microsomal glutathione s-transferase, putative; CONTAINS InterPro DOMAIN/s: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein (InterPro:IPR001129); Has 388 Blast hits to 388 proteins in 129 species: Archae - 0; Bacteria - 4; Metazoa - 195; Fungi - 88; Plants - 65; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (chl4|514105 : 48.1) no description available & (gnl|cdd|85252 : 41.8) no description available & (reliability: 100.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49189 PE=4 SV=1)'" P '26.9' 'misc.glutathione S transferases' 'tr|b7s3u7|b7s3u7_phatc' "'(gnl|cdd|83965 : 430.0) no description available & (ipr010987 : 96.70857) Glutathione S-transferase, C-terminal-like & (gnl|cdd|36085 : 87.4) no description available & (p04907|gstf3_maize : 55.1) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST class-phi) - Zea mays (Maize) & (chl4|514635 : 53.5) no description available & (at2g30860 : 51.2) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase PHI 9 (GSTF9); FUNCTIONS IN: glutathione transferase activity, glutathione peroxidase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to zinc ion, defense response to bacterium, toxin catabolic process, defense response; LOCATED IN: thylakoid, apoplast, chloroplast, plasma membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 10 (TAIR:AT2G30870.1); Has 9998 Blast hits to 9981 proteins in 1215 species: Archae - 0; Bacteria - 5032; Metazoa - 1549; Fungi - 611; Plants - 924; Viruses - 0; Other Eukaryotes - 1882 (source: NCBI BLink). & (loc_os01g27390.1 : 50.1) no description available & (reliability: 102.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd420 PE=4 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7fqs8|b7fqs8_phatc' "'(chl4|511190 : 557.0) no description available & (loc_os01g10050.1 : 530.0) no description available & (at1g55150 : 529.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 529.0) no description available & (p46942|db10_nicsy : 409.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 396.0) no description available & (ipr011545 : 106.15464) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1042.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17862 PE=3 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7gdq3|b7gdq3_phatc' "'(chl4|511424 : 402.0) no description available & (gnl|cdd|35345 : 395.0) no description available & (loc_os09g02700.1 : 375.0) no description available & (at1g71770 : 374.0) Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro.; poly(A)-binding protein 5 (PAB5); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 3 (TAIR:AT1G22760.1). & (ipr012677 : 233.23444) Nucleotide-binding, alpha-beta plait & (gnl|cdd|47820 : 101.0) no description available & (p28644|roc1_spiol : 85.9) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (reliability: 748.0) & (original description: Polyadenylate-binding protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23959 PE=3 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7fnw4|b7fnw4_phatc' "'(gnl|cdd|35866 : 368.0) no description available & (at1g80670 : 301.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G15850.1); Has 28564 Blast hits to 16034 proteins in 648 species: Archae - 58; Bacteria - 6462; Metazoa - 9394; Fungi - 6178; Plants - 3041; Viruses - 0; Other Eukaryotes - 3431 (source: NCBI BLink). & (loc_os08g07960.2 : 300.0) no description available & (chl4|514819 : 281.0) no description available & (ipr015943 : 105.51345) WD40/YVTN repeat-like-containing domain & (gnl|cdd|29257 : 103.0) no description available & (p93340|gblp_nicpl : 50.4) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 602.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24439 PE=4 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7fpe9|b7fpe9_phatc' "'(gnl|cdd|47687 : 46.0) no description available & (gnl|cdd|35345 : 40.7) no description available & (at1g49760 : 38.5) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.; poly(A) binding protein 8 (PAB8); CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1). & (reliability: 77.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42754 PE=4 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7g1z9|b7g1z9_phatc' "'(gnl|cdd|36800 : 171.0) no description available & (ipr015943 : 85.27903) WD40/YVTN repeat-like-containing domain & (p27766|dyi3_chlre : 68.9) Dynein, 70 kDa intermediate chain, flagellar outer arm (IC69) (IC70) - Chlamydomonas reinhardtii & (chl4|512971 : 68.9) no description available & (gnl|cdd|29257 : 65.0) no description available & (at5g23730 : 42.7) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1); Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16; Bacteria - 2654; Metazoa - 3890; Fungi - 2899; Plants - 1307; Viruses - 0; Other Eukaryotes - 1524 (source: NCBI BLink). & (loc_os08g44010.5 : 41.2) no description available & (reliability: 78.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46969 PE=4 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7g8v5|b7g8v5_phatc' "'(gnl|cdd|36809 : 393.0) no description available & (gnl|cdd|85352 : 367.0) no description available & (at5g52470 : 359.0) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.; fibrillarin 1 (FIB1); FUNCTIONS IN: snoRNA binding; INVOLVED IN: RNA methylation, rRNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fibrillarin (InterPro:IPR000692); BEST Arabidopsis thaliana protein match is: fibrillarin 2 (TAIR:AT4G25630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g57590.1 : 353.0) no description available & (chl4|518487 : 342.0) no description available & (ipr000692 : 240.81592) Fibrillarin & (reliability: 1139.4279) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48920 PE=3 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7g5j8|b7g5j8_phatc' "'(gnl|cdd|38638 : 115.0) no description available & (gnl|cdd|29711 : 111.0) no description available & (loc_os02g37430.1 : 89.0) no description available & (at4g02840 : 85.9) Small nuclear ribonucleoprotein family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: nucleus, small nucleolar ribonucleoprotein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Small nuclear ribonucleoprotein family protein (TAIR:AT3G07590.2). & (chl4|516351 : 81.3) no description available & (reliability: 171.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51100 PE=4 SV=1)'" P '27.1' 'RNA.processing' 'tr|b7s475|b7s475_phatc' "'(gnl|cdd|35552 : 479.0) no description available & (loc_os01g36860.1 : 411.0) no description available & (at5g14610 : 410.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (p46942|db10_nicsy : 399.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (chl4|511190 : 390.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (ipr011545 : 100.72596) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 800.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd920 PE=3 SV=1)'" P '27.1.1' 'RNA.processing.splicing' 'tr|b7fz63|b7fz63_phatc' "'(loc_os03g25770.1 : 83.6) no description available & (at5g18810 : 83.2) encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.; SC35-like splicing factor 28 (SCL28); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: nuclear speck, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (chl4|514680 : 79.3) no description available & (gnl|cdd|84495 : 65.6) no description available & (gnl|cdd|35334 : 53.9) no description available & (ipr012677 : 51.966206) Nucleotide-binding, alpha-beta plait & (p19683|roc4_nicsy : 42.4) 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 166.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12366 PE=4 SV=1)'" P '27.1.1' 'RNA.processing.splicing' 'tr|b7s3y6|b7s3y6_phatc' "'(gnl|cdd|35510 : 227.0) no description available & (loc_os10g32880.2 : 148.0) no description available & (chl4|518405 : 144.0) no description available & (at2g33340 : 137.0) Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity.; MOS4-associated complex 3B (MAC3B); FUNCTIONS IN: ubiquitin-protein ligase activity, nucleotide binding; INVOLVED IN: defense response to bacterium; LOCATED IN: cell wall, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), U box domain (InterPro:IPR003613), WD40 repeat (InterPro:IPR001680), Pre-mRNA-splicing factor 19 (InterPro:IPR013915), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: MOS4-associated complex 3A (TAIR:AT1G04510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr015943 : 126.91662) WD40/YVTN repeat-like-containing domain & (gnl|cdd|29257 : 99.7) no description available & (p49026|gblp_tobac : 45.4) Guanine nucleotide-binding protein subunit beta-like protein - Nicotiana tabacum (Common tobacco) & (reliability: 274.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1638 PE=4 SV=1)'" P '27.1.19' 'RNA.processing.ribonucleases' 'tr|b7fu25|b7fu25_phatc' '(gnl|cdd|35839 : 49.6) no description available & (gnl|cdd|34836 : 44.9) no description available & (chl4|512928 : 44.7) no description available & (at1g73875 : 41.2) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g32330.2 : 38.9) no description available & (reliability: 76.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44427 PE=4 SV=1)' P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7gbf9|b7gbf9_phatc' "'(gnl|cdd|35563 : 346.0) no description available & (at5g63630 : 305.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (loc_os01g43120.1 : 304.0) no description available & (gnl|cdd|30859 : 283.0) no description available & (chl4|516276 : 282.0) no description available & (p46942|db10_nicsy : 177.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (ipr011545 : 89.27019) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 610.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16073 PE=4 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7fqs8|b7fqs8_phatc' "'(chl4|511190 : 557.0) no description available & (loc_os01g10050.1 : 530.0) no description available & (at1g55150 : 529.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (gnl|cdd|35552 : 529.0) no description available & (p46942|db10_nicsy : 409.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|30859 : 396.0) no description available & (ipr011545 : 106.15464) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1058.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17862 PE=3 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7fzs6|b7fzs6_phatc' "'(gnl|cdd|35556 : 506.0) no description available & (loc_os11g38670.1 : 479.0) no description available & (at3g58510 : 475.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|509775 : 471.0) no description available & (gnl|cdd|30859 : 370.0) no description available & (p46942|db10_nicsy : 306.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (ipr011545 : 102.87439) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 950.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_2097 PE=3 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7g0r3|b7g0r3_phatc' "'(gnl|cdd|35552 : 343.0) no description available & (at5g26742 : 340.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (gnl|cdd|30859 : 333.0) no description available & (loc_os09g34910.1 : 310.0) no description available & (chl4|517675 : 310.0) no description available & (q41382|rh7_spiol : 307.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (ipr011545 : 88.66942) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 680.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27821 PE=4 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7fr43|b7fr43_phatc' "'(gnl|cdd|30859 : 93.7) no description available & (gnl|cdd|35528 : 89.3) no description available & (at1g12770 : 57.4) Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (loc_os03g12000.1 : 53.9) no description available & (chl4|509775 : 50.1) no description available & (p41380|if4a3_nicpl : 38.1) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 114.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43245 PE=4 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7fz31|b7fz31_phatc' "'(gnl|cdd|30859 : 187.0) no description available & (gnl|cdd|35552 : 163.0) no description available & (loc_os09g21520.1 : 119.0) no description available & (at4g09730 : 110.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (chl4|520783 : 107.0) no description available & (p41380|if4a3_nicpl : 79.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 199.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45898 PE=4 SV=1)'" P '27.1.2' 'RNA.processing.RNA helicase' 'tr|b7s475|b7s475_phatc' "'(gnl|cdd|35552 : 479.0) no description available & (loc_os01g36860.1 : 411.0) no description available & (at5g14610 : 410.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4). & (p46942|db10_nicsy : 399.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (chl4|511190 : 390.0) no description available & (gnl|cdd|30859 : 374.0) no description available & (ipr011545 : 100.72596) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 820.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd920 PE=3 SV=1)'" P '27.1.3.11' 'RNA.processing.3' end processing.Pfs2' 'tr|b7fy56|b7fy56_phatc' "'(gnl|cdd|35524 : 357.0) no description available & (gnl|cdd|87748 : 170.0) no description available & (ipr015049 : 92.17597) Domain of unknown function DUF1900 & (q39336|gblp_brana : 68.9) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (at1g18080 : 67.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (chl4|512570 : 64.3) no description available & (loc_os01g49290.1 : 62.4) no description available & (reliability: 121.0) & (original description: Coronin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45580 PE=3 SV=1)'" P '27.1.3.17' 'RNA.processing.3' end processing.PabN' 'tr|b7g1h1|b7g1h1_phatc' "'(at5g51120 : 105.0) Encodes a homolog of the protein PABN1, a polyadenylation factor subunit.; polyadenylate-binding protein 1 (PABN1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G65260.1). & (gnl|cdd|39410 : 104.0) no description available & (loc_os02g52140.1 : 102.0) no description available & (chl4|523355 : 101.0) no description available & (gnl|cdd|31068 : 68.9) no description available & (ipr012677 : 51.828056) Nucleotide-binding, alpha-beta plait & (p19684|roc5_nicsy : 47.8) 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13095 PE=4 SV=1)'" P '27.1.3.8' 'RNA.processing.3' end processing.CstF77' 'tr|b7fyk1|b7fyk1_phatc' "'(gnl|cdd|37125 : 118.0) no description available & (at1g17760 : 105.0) Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-end??processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.; CSTF77; FUNCTIONS IN: protein binding, mRNA binding, transcription repressor activity; INVOLVED IN: RNA 3'-end processing, mRNA processing, embryo sac development; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Suppressor of forked (InterPro:IPR008847); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2092 Blast hits to 1537 proteins in 234 species: Archae - 0; Bacteria - 14; Metazoa - 771; Fungi - 713; Plants - 343; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink). & (loc_os12g38380.1 : 98.6) no description available & (gnl|cdd|34710 : 84.4) no description available & (chl4|512972 : 50.1) no description available & (reliability: 210.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45697 PE=4 SV=1)'" P '27.2' 'RNA.transcription' 'tr|b7gag2|b7gag2_phatc' "'(gnl|cdd|35286 : 981.0) no description available & (at4g19210 : 906.0) member of RLI subfamily; RNAse l inhibitor protein 2 (RLI2); FUNCTIONS IN: transporter activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), 4Fe-4S binding domain (InterPro:IPR001450), ATPase, AAA+ type, core (InterPro:IPR003593), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209), ABC transporter, ABCE (InterPro:IPR013283), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 1 (TAIR:AT3G13640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os11g34350.1 : 891.0) no description available & (chl4|526281 : 890.0) no description available & (gnl|cdd|31438 : 851.0) no description available & (q85a69|cysa_antfo : 72.4) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Anthoceros formosae (Hornwort) & (reliability: 1812.0) & (original description: Phosphatase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_1048 PE=4 SV=1)'" P '27.2' 'RNA.transcription' 'tr|b7fsy0|b7fsy0_phatc' "'(gnl|cdd|38428 : 234.0) no description available & (chl4|519428 : 223.0) no description available & (at3g22320 : 207.0) Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.; NRPB5; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381), RNA polymerase, subunit H/Rpb5, conserved site (InterPro:IPR020608); BEST Arabidopsis thaliana protein match is: RNA polymerase II fifth largest subunit, C (TAIR:AT5G57980.1); Has 1046 Blast hits to 1046 proteins in 368 species: Archae - 260; Bacteria - 0; Metazoa - 162; Fungi - 216; Plants - 118; Viruses - 20; Other Eukaryotes - 270 (source: NCBI BLink). & (loc_os04g41040.1 : 204.0) no description available & (gnl|cdd|65020 : 102.0) no description available & (ipr005571 : 87.528694) RNA polymerase, Rpb5, N-terminal & (reliability: 567.17523) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25420 PE=3 SV=1)'" P '27.2' 'RNA.transcription' 'sp|a0t0d7|rpob_phatc' "'(ipr007120 : 1500.0) DNA-directed RNA polymerase, subunit 2, domain 6 & (gnl|cdd|79220 : 1275.0) no description available & (q9mus5|rpob_mesvi : 975.0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) - Mesostigma viride & (atcg00190 : 741.0) Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution.; RNA polymerase subunit beta (RPOB); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, subunit 2, domain 6 (InterPro:IPR007120), RNA polymerase Rpb2, domain 7 (InterPro:IPR007641), RNA polymerase, beta subunit, protrusion (InterPro:IPR007644), DNA-directed RNA polymerase, beta subunit, bacterial-type (InterPro:IPR010243), RNA polymerase Rpb2, domain 3 (InterPro:IPR007645), DNA-directed RNA polymerase, subunit 2 (InterPro:IPR015712), RNA polymerase Rpb2, domain 2 (InterPro:IPR007642), RNA polymerase, beta subunit, conserved site (InterPro:IPR007121); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT4G21710.1). & (loc_osp1g00240.1 : 736.0) no description available & (gnl|cdd|35435 : 442.0) no description available & (chl4|513746 : 169.0) no description available & (reliability: 4107.0) & (original description: DNA-directed RNA polymerase subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpoB PE=3 SV=1)'" P '27.2' 'RNA.transcription' 'sp|a0t0d8|rpoc1_phatc' "'(gnl|cdd|79237 : 659.0) no description available & (q9mus6|rpoc1_mesvi : 651.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Mesostigma viride & (atcg00180 : 486.0) RNA polymerase beta' subunit-1; RPOC1; FUNCTIONS IN: DNA-directed RNA polymerase activity; INVOLVED IN: RNA elongation; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1). & (loc_osp1g00250.1 : 473.0) no description available & (gnl|cdd|35481 : 197.0) no description available & (ipr007080 : 162.84169) RNA polymerase Rpb1, domain 1 & (chl4|520766 : 130.0) no description available & (reliability: 1256.9729) & (original description: DNA-directed RNA polymerase subunit beta' OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpoC1 PE=3 SV=1)'" P '27.3.11' 'RNA.regulation of transcription.C2H2 zinc finger family' 'tr|b7gaf5|b7gaf5_phatc' "'(gnl|cdd|28912 : 62.8) no description available & (gnl|cdd|36249 : 55.6) no description available & (at4g05330 : 54.7) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 13 (AGD13); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os09g37100.1 : 50.4) no description available & (chl4|517077 : 37.0) no description available & (reliability: 109.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49389 PE=4 SV=1)'" P '27.3.17' "'RNA.regulation of transcription.CPP(Zn),CPP1-related transcription factor family'" 'tr|b7fpk1|b7fpk1_phatc' "'(gnl|cdd|36386 : 124.0) no description available & (at4g14770 : 117.0) TESMIN/TSO1-like CXC 2 (TCX2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT3G22780.1); Has 1250 Blast hits to 741 proteins in 97 species: Archae - 0; Bacteria - 6; Metazoa - 464; Fungi - 8; Plants - 353; Viruses - 0; Other Eukaryotes - 419 (source: NCBI BLink). & (loc_os02g17460.1 : 115.0) no description available & (chl4|512450 : 100.0) no description available & (gnl|cdd|86393 : 65.0) no description available & (reliability: 234.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42794 PE=4 SV=1)'" P '27.3.20' "'RNA.regulation of transcription.G2-like transcription factor family, GARP'" 'tr|b7g3r5|b7g3r5_phatc' "'(at5g58080 : 50.8) member of Response Regulator: B- Type; response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink). & (loc_os06g43910.1 : 49.7) no description available & (chl4|518625 : 47.8) no description available & (q42450|rcab_horvu : 35.8) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) & (reliability: 98.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47256 PE=4 SV=1)'" P '27.3.23' "'RNA.regulation of transcription.HSF,Heat-shock transcription factor family'" 'tr|b7gd29|b7gd29_phatc' "'(gnl|cdd|35846 : 69.5) no description available & (gnl|cdd|34769 : 68.9) no description available & (at2g41690 : 60.8) member of Heat Stress Transcription Factor (Hsf) family; heat shock transcription factor B3 (HSFB3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleus; EXPRESSED IN: inflorescence meristem, leaf whorl, flower, cultured cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor B2A (TAIR:AT5G62020.1); Has 2046 Blast hits to 2034 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 329; Fungi - 465; Plants - 775; Viruses - 0; Other Eukaryotes - 477 (source: NCBI BLink). & (loc_os09g28354.1 : 60.1) no description available & (chl4|525077 : 59.3) no description available & (ipr011991 : 47.521378) Winged helix-turn-helix transcription repressor DNA-binding & (reliability: 121.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50136 PE=3 SV=1)'" P '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'tr|b7g689|b7g689_phatc' "'(gnl|cdd|35274 : 109.0) no description available & (at5g41020 : 71.6) myb family transcription factor; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os06g19980.1 : 70.1) no description available & (gnl|cdd|34748 : 62.7) no description available & (ipr012287 : 57.034) no description available & (chl4|519163 : 39.3) no description available & (reliability: 143.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48179 PE=4 SV=1)'" P '27.3.25' 'RNA.regulation of transcription.MYB domain transcription factor family' 'tr|b7gc08|b7gc08_phatc' "'(chl4|523374 : 62.4) no description available & (loc_os01g06320.1 : 61.6) no description available & (at5g52660 : 60.8) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|84643 : 53.2) no description available & (gnl|cdd|37783 : 36.5) no description available & (reliability: 112.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49838 PE=4 SV=1)'" P '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'tr|b7ftp2|b7ftp2_phatc' "'(gnl|cdd|47827 : 43.3) no description available & (loc_os03g58470.1 : 43.1) no description available & (p23444|h1_maize : 42.4) Histone H1 - Zea mays (Maize) & (chl4|523385 : 41.6) no description available & (ipr011991 : 40.571064) Winged helix-turn-helix transcription repressor DNA-binding & (at1g49950 : 35.8) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 71.6) & (original description: N-terminal histone linker H1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44318 PE=3 SV=1)'" P '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'tr|b7g7q5|b7g7q5_phatc' "'(loc_os12g41920.3 : 50.8) no description available & (at1g49950 : 45.8) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|522082 : 45.8) no description available & (gnl|cdd|47985 : 41.4) no description available & (gnl|cdd|35483 : 38.0) no description available & (reliability: 91.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48573 PE=4 SV=1)'" P '27.3.26' 'RNA.regulation of transcription.MYB-related transcription factor family' 'tr|b7gc08|b7gc08_phatc' "'(chl4|523374 : 62.4) no description available & (loc_os01g06320.1 : 61.6) no description available & (at5g52660 : 60.8) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G01280.1); Has 1360 Blast hits to 1350 proteins in 120 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 8; Plants - 1059; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). & (gnl|cdd|84643 : 53.2) no description available & (gnl|cdd|37783 : 36.5) no description available & (reliability: 121.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49838 PE=4 SV=1)'" P '27.3.35' 'RNA.regulation of transcription.bZIP transcription factor family' 'tr|b7g789|b7g789_phatc' "'(gnl|cdd|85799 : 88.0) no description available & (loc_os05g42010.1 : 57.8) no description available & (at1g05270 : 56.6) TraB family protein; CONTAINS InterPro DOMAIN/s: Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis thaliana protein match is: TraB family protein (TAIR:AT2G32340.1); Has 779 Blast hits to 750 proteins in 262 species: Archae - 153; Bacteria - 256; Metazoa - 121; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink). & (ipr002816 : 49.592163) Pheromone shutdown, TraB & (gnl|cdd|38071 : 43.1) no description available & (reliability: 113.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48468 PE=4 SV=1)'" P '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'tr|b7fuh5|b7fuh5_phatc' "'(gnl|cdd|35207 : 53.1) no description available & (gnl|cdd|35746 : 50.3) no description available & (at1g20696 : 38.1) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (chl4|512434 : 37.4) no description available & (loc_os02g15810.1 : 35.0) no description available & (reliability: 73.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44554 PE=4 SV=1)'" P '27.3.38' 'RNA.regulation of transcription.AT-rich interaction domain containing transcription factor family' 'tr|b7gdf0|b7gdf0_phatc' "'(gnl|cdd|35207 : 59.3) no description available & (gnl|cdd|35746 : 54.6) no description available & (chl4|523068 : 47.0) no description available & (loc_os09g37250.1 : 43.1) no description available & (at3g28730 : 40.8) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (o04235|ssrp1_vicfa : 40.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (ipr000910 : 37.757652) no description available & (reliability: 74.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50240 PE=4 SV=1)'" P '27.3.39' 'RNA.regulation of transcription.AtSR Transcription Factor family' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '27.3.42' 'RNA.regulation of transcription.Bromodomain proteins' 'tr|b7fty9|b7fty9_phatc' "'(gnl|cdd|36687 : 98.7) no description available & (gnl|cdd|47625 : 87.7) no description available & (loc_os02g38980.6 : 78.6) no description available & (at5g63320 : 74.3) Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.; nuclear protein X1 (NPX1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 5825 Blast hits to 4645 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 3479; Fungi - 996; Plants - 604; Viruses - 2; Other Eukaryotes - 742 (source: NCBI BLink). & (chl4|525374 : 54.3) no description available & (ipr001487 : 53.274166) Bromodomain & (reliability: 188.02979) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44399 PE=4 SV=1)'" P '27.3.44' 'RNA.regulation of transcription.Chromatin Remodeling Factors' 'tr|b7fsa6|b7fsa6_phatc' "'(gnl|cdd|36493 : 56.6) no description available & (gnl|cdd|34856 : 50.5) no description available & (at2g33610 : 46.2) Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.; switch subunit 3 (SWI3B); FUNCTIONS IN: DNA binding; INVOLVED IN: chromatin remodeling; LOCATED IN: SWI/SNF complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 1055 Blast hits to 780 proteins in 192 species: Archae - 0; Bacteria - 2; Metazoa - 438; Fungi - 310; Plants - 199; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (loc_os02g10060.1 : 35.4) no description available & (reliability: 92.4) & (original description: Chromatin remodeling-related protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54092 PE=4 SV=1)'" P '27.3.5' 'RNA.regulation of transcription.ARR' 'tr|b7g3r5|b7g3r5_phatc' "'(at5g58080 : 50.8) member of Response Regulator: B- Type; response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink). & (loc_os06g43910.1 : 49.7) no description available & (chl4|518625 : 47.8) no description available & (q42450|rcab_horvu : 35.8) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) & (reliability: 101.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47256 PE=4 SV=1)'" P '27.3.50' 'RNA.regulation of transcription.General Transcription' 'tr|b7ftc4|b7ftc4_phatc' '(gnl|cdd|37451 : 125.0) no description available & (chl4|518319 : 99.8) no description available & (loc_os03g01910.1 : 96.3) no description available & (at1g17880 : 89.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|65629 : 74.5) no description available & (ipr002715 : 44.243412) Nascent polypeptide-associated complex NAC & (reliability: 178.0) & (original description: Nascent polypeptide-associated complex subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9697 PE=3 SV=1)' P '27.3.52' 'RNA.regulation of transcription.Global transcription factor group' 'tr|b7g376|b7g376_phatc' "'(gnl|cdd|37210 : 407.0) no description available & (at4g08350 : 265.0) global transcription factor group A2 (GTA2); FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity; INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter; LOCATED IN: ribosome, intracellular; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Transcription elongation factor Spt5 (InterPro:IPR017071), Transcription antitermination protein, NusG, N-terminal (InterPro:IPR006645), KOW (InterPro:IPR005824), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), Transcription elongation factor Spt5, NGN domain (InterPro:IPR005100); BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5 (TAIR:AT2G34210.1); Has 14630 Blast hits to 9620 proteins in 607 species: Archae - 121; Bacteria - 647; Metazoa - 6069; Fungi - 2592; Plants - 1061; Viruses - 307; Other Eukaryotes - 3833 (source: NCBI BLink). & (loc_os06g10620.1 : 207.0) no description available & (chl4|511248 : 199.0) no description available & (gnl|cdd|34765 : 130.0) no description available & (reliability: 530.0) & (original description: Transcription elongation factor SPT5 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47388 PE=3 SV=1)'" P '27.3.55' 'RNA.regulation of transcription.HDA' 'tr|b7gby2|b7gby2_phatc' "'(gnl|cdd|36556 : 610.0) no description available & (at5g63110 : 457.0) RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.; histone deacetylase 6 (HDA6); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: response to salt stress, gene silencing, posttranscriptional gene silencing, response to abscisic acid stimulus, histone deacetylation; LOCATED IN: nucleus, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 1 (TAIR:AT4G38130.1); Has 8759 Blast hits to 8549 proteins in 1444 species: Archae - 221; Bacteria - 3162; Metazoa - 1525; Fungi - 546; Plants - 480; Viruses - 0; Other Eukaryotes - 2825 (source: NCBI BLink). & (loc_os08g25570.1 : 452.0) no description available & (chl4|516505 : 451.0) no description available & (p56521|hdac_maize : 437.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (gnl|cdd|85068 : 385.0) no description available & (ipr000286 : 264.2095) Histone deacetylase superfamily & (reliability: 914.0) & (original description: Histone deacetylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49800 PE=3 SV=1)'" P '27.3.55' 'RNA.regulation of transcription.HDA' 'tr|b7g263|b7g263_phatc' "'(gnl|cdd|36556 : 651.0) no description available & (loc_os06g38470.1 : 563.0) no description available & (at4g38130 : 555.0) Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation.; histone deacetylase 1 (HD1); CONTAINS InterPro DOMAIN/s: Histone deacetylase (InterPro:IPR003084), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 6 (TAIR:AT5G63110.1); Has 8759 Blast hits to 8549 proteins in 1452 species: Archae - 219; Bacteria - 3192; Metazoa - 1525; Fungi - 536; Plants - 478; Viruses - 0; Other Eukaryotes - 2809 (source: NCBI BLink). & (p56521|hdac_maize : 543.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (chl4|516505 : 478.0) no description available & (gnl|cdd|85068 : 415.0) no description available & (ipr000286 : 274.78415) Histone deacetylase superfamily & (reliability: 1110.0) & (original description: Histone deacetylase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51026 PE=3 SV=1)'" P '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'tr|b7fqd6|b7fqd6_phatc' "'(ipr000910 : 94.22367) no description available & (gnl|cdd|35746 : 81.9) no description available & (chl4|512434 : 77.8) no description available & (o04235|ssrp1_vicfa : 72.8) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (gnl|cdd|35207 : 72.0) no description available & (at3g28730 : 62.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (loc_os05g08970.1 : 48.5) no description available & (reliability: 124.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24886 PE=4 SV=1)'" P '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'tr|b7fuh5|b7fuh5_phatc' "'(gnl|cdd|35207 : 53.1) no description available & (gnl|cdd|35746 : 50.3) no description available & (at1g20696 : 38.1) Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.; high mobility group B3 (HMGB3); FUNCTIONS IN: chromatin binding, structural constituent of chromatin, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B2 (TAIR:AT1G20693.2); Has 5742 Blast hits to 4932 proteins in 507 species: Archae - 0; Bacteria - 0; Metazoa - 4274; Fungi - 383; Plants - 553; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (chl4|512434 : 37.4) no description available & (loc_os02g15810.1 : 35.0) no description available & (reliability: 76.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44554 PE=4 SV=1)'" P '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'tr|b7gac7|b7gac7_phatc' "'(gnl|cdd|35746 : 57.3) no description available & (gnl|cdd|35207 : 56.2) no description available & (ipr000910 : 54.674255) no description available & (o04235|ssrp1_vicfa : 47.8) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (at3g28730 : 43.9) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (chl4|511215 : 40.0) no description available & (loc_os09g37250.1 : 38.5) no description available & (reliability: 87.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49362 PE=4 SV=1)'" P '27.3.62' 'RNA.regulation of transcription.Nucleosome/chromatin assembly factor group' 'tr|b7gdf0|b7gdf0_phatc' "'(gnl|cdd|35207 : 59.3) no description available & (gnl|cdd|35746 : 54.6) no description available & (chl4|523068 : 47.0) no description available & (loc_os09g37250.1 : 43.1) no description available & (at3g28730 : 40.8) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (o04235|ssrp1_vicfa : 40.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (ipr000910 : 37.757652) no description available & (reliability: 81.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50240 PE=4 SV=1)'" P '27.3.66' 'RNA.regulation of transcription.Psudo ARR transcription factor family' 'tr|b7g3r5|b7g3r5_phatc' "'(at5g58080 : 50.8) member of Response Regulator: B- Type; response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink). & (loc_os06g43910.1 : 49.7) no description available & (chl4|518625 : 47.8) no description available & (q42450|rcab_horvu : 35.8) Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast precursor (RuBisCO activase B) (RA B) - Hordeum vulgare (Barley) & (reliability: 97.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47256 PE=4 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b7g5k3|b7g5k3_phatc' "'(gnl|cdd|36849 : 325.0) no description available & (q43124|pcna_brana : 303.0) Proliferating cell nuclear antigen (PCNA) - Brassica napus (Rape) & (at1g07370 : 301.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (loc_os02g56130.1 : 294.0) no description available & (chl4|513184 : 278.0) no description available & (gnl|cdd|48351 : 231.0) no description available & (ipr022649 : 112.64435) Proliferating cell nuclear antigen, PCNA, C-terminal & (reliability: 602.0) & (original description: Proliferating cell nuclear antigen OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PCNA PE=3 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b5y4z7|b5y4z7_phatc' "'(gnl|cdd|37784 : 574.0) no description available & (chl4|513377 : 478.0) no description available & (at1g56110 : 477.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (loc_os03g22880.1 : 465.0) no description available & (gnl|cdd|31687 : 309.0) no description available & (ipr002687 : 126.30571) Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain & (reliability: 954.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18579 PE=4 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b7fw92|b7fw92_phatc' "'(gnl|cdd|37783 : 476.0) no description available & (loc_os03g22730.5 : 410.0) no description available & (at5g27120 : 403.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G05060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|510054 : 397.0) no description available & (gnl|cdd|31687 : 316.0) no description available & (ipr002687 : 132.85678) Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain & (reliability: 806.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19552 PE=4 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b7g5l6|b7g5l6_phatc' "'(chl4|523376 : 135.0) no description available & (gnl|cdd|34495 : 90.8) no description available & (gnl|cdd|35752 : 79.3) no description available & (loc_os10g42190.2 : 77.0) no description available & (at5g44700 : 63.9) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p28523|csk2a_maize : 44.7) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 117.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47992 PE=4 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b7g7q5|b7g7q5_phatc' "'(loc_os12g41920.3 : 50.8) no description available & (at1g49950 : 45.8) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|522082 : 45.8) no description available & (gnl|cdd|47985 : 41.4) no description available & (gnl|cdd|35483 : 38.0) no description available & (reliability: 91.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48573 PE=4 SV=1)'" P '27.3.67' 'RNA.regulation of transcription.putative transcription regulator' 'tr|b7ftc4|b7ftc4_phatc' '(gnl|cdd|37451 : 125.0) no description available & (chl4|518319 : 99.8) no description available & (loc_os03g01910.1 : 96.3) no description available & (at1g17880 : 89.0) basic transcription factor 3 (BTF3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex NAC (TAIR:AT1G73230.1); Has 841 Blast hits to 841 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 427; Fungi - 178; Plants - 145; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (gnl|cdd|65629 : 74.5) no description available & (ipr002715 : 44.243412) Nascent polypeptide-associated complex NAC & (reliability: 177.2) & (original description: Nascent polypeptide-associated complex subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9697 PE=3 SV=1)' P '27.3.69' 'RNA.regulation of transcription.SET-domain transcriptional regulator family' 'tr|b5y418|b5y418_phatc' "'(loc_os12g13460.1 : 119.0) no description available & (gnl|cdd|36551 : 114.0) no description available & (at5g14260 : 112.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43088|rbcmt_pea : 105.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) - & (chl4|513361 : 97.4) no description available & (gnl|cdd|87855 : 66.1) no description available & (ipr015353 : 52.489452) Rubisco LS methyltransferase, substrate-binding domain & (reliability: 224.0) & (original description: Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rbcMT PE=4 SV=1)'" P '27.3.71' 'RNA.regulation of transcription.SNF7' 'tr|b7fxi3|b7fxi3_phatc' '(gnl|cdd|38442 : 170.0) no description available & (chl4|521248 : 124.0) no description available & (at1g73030 : 118.0) Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.; VPS46.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting 46.1 (TAIR:AT1G17730.1); Has 1330 Blast hits to 1329 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 507; Fungi - 292; Plants - 340; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). & (loc_os06g43590.3 : 118.0) no description available & (gnl|cdd|86302 : 67.9) no description available & (ipr005024 : 38.807476) Snf7 & (reliability: 236.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11901 PE=4 SV=1)' P '27.3.71' 'RNA.regulation of transcription.SNF7' 'tr|b5y534|b5y534_phatc' '(gnl|cdd|36868 : 162.0) no description available & (gnl|cdd|86302 : 104.0) no description available & (chl4|514492 : 100.0) no description available & (at5g04850 : 92.8) VPS60.2; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT3G10640.1). & (loc_os01g01350.1 : 91.3) no description available & (ipr005024 : 90.493965) Snf7 & (reliability: 185.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18620 PE=3 SV=1)' P '27.3.71' 'RNA.regulation of transcription.SNF7' 'tr|b7g8b8|b7g8b8_phatc' '(gnl|cdd|38440 : 186.0) no description available & (loc_os07g13270.1 : 164.0) no description available & (at2g06530 : 158.0) VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: vacuolar protein sorting-associated protein 2.3 (TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins in 271 species: Archae - 17; Bacteria - 20; Metazoa - 1106; Fungi - 512; Plants - 555; Viruses - 5; Other Eukaryotes - 309 (source: NCBI BLink). & (chl4|521915 : 145.0) no description available & (gnl|cdd|86302 : 108.0) no description available & (ipr005024 : 78.63039) Snf7 & (reliability: 316.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_5904 PE=4 SV=1)' P '27.3.73' 'RNA.regulation of transcription.Zn-finger(CCHC)' 'tr|b7ge46|b7ge46_phatc' "'(loc_os02g32350.2 : 287.0) no description available & (ipr006021 : 279.78397) Staphylococcal nuclease (SNase-like) & (at5g07350 : 276.0) RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.; TUDOR-SN protein 1 (Tudor1); CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), RNA-induced silencing complex, nuclease component Tudor-SN (InterPro:IPR016685), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Tudor subgroup (InterPro:IPR018351), Tudor domain (InterPro:IPR002999), Maternal tudor protein (InterPro:IPR008191); BEST Arabidopsis thaliana protein match is: TUDOR-SN protein 2 (TAIR:AT5G61780.1); Has 1297 Blast hits to 805 proteins in 208 species: Archae - 2; Bacteria - 27; Metazoa - 772; Fungi - 182; Plants - 145; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|37250 : 245.0) no description available & (chl4|512365 : 213.0) no description available & (gnl|cdd|47646 : 96.9) no description available & (p80366|ppaf_phavu : 35.0) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2) (PAP) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 552.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50440 PE=4 SV=1)'" P '27.3.75' 'RNA.regulation of transcription.GRP' 'tr|b7gen1|b7gen1_phatc' "'(gnl|cdd|31469 : 46.3) no description available & (at2g21060 : 44.7) glycine-rich protein (AtGRP2b); glycine-rich protein 2B (GRP2B); FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Cold-shock conserved site (InterPro:IPR019844), Zinc finger, CCHC retroviral-type (InterPro:IPR013084), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Cold shock protein (InterPro:IPR011129), Zinc finger, CCHC-type (InterPro:IPR001878), Cold-shock protein, DNA-binding (InterPro:IPR002059); BEST Arabidopsis thaliana protein match is: glycine rich protein 2 (TAIR:AT4G38680.1); Has 124576 Blast hits to 52040 proteins in 3306 species: Archae - 178; Bacteria - 46955; Metazoa - 35565; Fungi - 6939; Plants - 11254; Viruses - 1676; Other Eukaryotes - 22009 (source: NCBI BLink). & (gnl|cdd|38280 : 42.4) no description available & (p27484|grp2_nicsy : 39.3) Glycine-rich protein 2 - Nicotiana sylvestris (Wood tobacco) & (loc_os02g02870.1 : 36.2) no description available & (reliability: 89.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41601 PE=4 SV=1)'" P '27.3.75' 'RNA.regulation of transcription.GRP' 'tr|b7fx33|b7fx33_phatc' "'(chl4|525923 : 82.4) no description available & (gnl|cdd|47687 : 75.3) no description available & (q08935|roc1_nicsy : 71.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (loc_os09g39180.1 : 67.4) no description available & (at2g37220 : 66.2) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35331 : 62.5) no description available & (ipr012677 : 53.757965) Nucleotide-binding, alpha-beta plait & (reliability: 131.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8269 PE=4 SV=1)'" P '27.3.75' 'RNA.regulation of transcription.GRP' 'tr|b7fxb9|b7fxb9_phatc' "'(chl4|525923 : 85.9) no description available & (at4g39260 : 79.7) Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; cold, circadian rhythm, and RNA binding 1 (CCR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to zinc ion, response to salt stress, response to cold, circadian rhythm, innate immune response; LOCATED IN: nucleolus, cell wall, peroxisome, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and rna binding 2 (TAIR:AT2G21660.2); Has 82664 Blast hits to 34440 proteins in 1574 species: Archae - 59; Bacteria - 22063; Metazoa - 30672; Fungi - 6267; Plants - 13203; Viruses - 1104; Other Eukaryotes - 9296 (source: NCBI BLink). & (gnl|cdd|47687 : 73.7) no description available & (q99070|grp2_sorbi : 70.5) Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (loc_os03g61990.5 : 69.3) no description available & (gnl|cdd|39408 : 66.7) no description available & (ipr012677 : 53.34512) Nucleotide-binding, alpha-beta plait & (reliability: 159.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8270 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7fwp5|b7fwp5_phatc' "'(at1g65260 : 154.0) Encodes a protein required for thylakoid membrane formation.; plastid transcriptionally active 4 (PTAC4); INVOLVED IN: vesicle organization, thylakoid membrane organization; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PspA/IM30 (InterPro:IPR007157); Has 3123 Blast hits to 3108 proteins in 1139 species: Archae - 38; Bacteria - 2412; Metazoa - 160; Fungi - 68; Plants - 89; Viruses - 95; Other Eukaryotes - 261 (source: NCBI BLink). & (q8s0j7|im30_orysa : 148.0) Probable membrane-associated 30 kDa protein, chloroplast precursor - Oryza sativa (Rice) & (loc_os01g67000.1 : 148.0) no description available & (gnl|cdd|32027 : 131.0) no description available & (chl4|514611 : 112.0) no description available & (ipr007157 : 106.553795) PspA/IM30 & (gnl|cdd|35383 : 37.1) no description available & (reliability: 308.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19661 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7fp70|b7fp70_phatc' "'(at1g63860 : 39.3) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63870.1); Has 21839 Blast hits to 14719 proteins in 768 species: Archae - 18; Bacteria - 1232; Metazoa - 3443; Fungi - 708; Plants - 12993; Viruses - 298; Other Eukaryotes - 3147 (source: NCBI BLink). & (gnl|cdd|36280 : 36.5) no description available & (gnl|cdd|85876 : 35.4) no description available & (reliability: 74.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42689 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7fqv5|b7fqv5_phatc' "'(loc_os07g11110.1 : 175.0) no description available & (at3g63140 : 152.0) Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.; chloroplast stem-loop binding protein of 41 kDa (CSP41A); FUNCTIONS IN: mRNA binding, poly(U) RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: chloroplast RNA binding (TAIR:AT1G09340.1); Has 1047 Blast hits to 1047 proteins in 372 species: Archae - 70; Bacteria - 649; Metazoa - 6; Fungi - 5; Plants - 106; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink). & (chl4|510026 : 130.0) no description available & (gnl|cdd|30800 : 73.8) no description available & (gnl|cdd|35966 : 57.2) no description available & (ipr016040 : 46.0517) NAD(P)-binding domain & (reliability: 304.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43169 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 84.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7g1d9|b7g1d9_phatc' "'(loc_os09g23690.1 : 51.2) no description available & (chl4|519344 : 48.9) no description available & (gnl|cdd|87954 : 48.4) no description available & (at2g01650 : 41.2) encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.; plant UBX domain-containing protein 2 (PUX2); CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), UBX (InterPro:IPR001012), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 563 Blast hits to 563 proteins in 115 species: Archae - 0; Bacteria - 15; Metazoa - 269; Fungi - 22; Plants - 176; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46483 PE=4 SV=1)'" P '27.3.99' 'RNA.regulation of transcription.unclassified' 'tr|b7fx33|b7fx33_phatc' "'(chl4|525923 : 82.4) no description available & (gnl|cdd|47687 : 75.3) no description available & (q08935|roc1_nicsy : 71.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (loc_os09g39180.1 : 67.4) no description available & (at2g37220 : 66.2) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35331 : 62.5) no description available & (ipr012677 : 53.757965) Nucleotide-binding, alpha-beta plait & (reliability: 130.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8269 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7fpp7|b7fpp7_phatc' "'(loc_os07g46820.2 : 183.0) no description available & (gnl|cdd|35366 : 182.0) no description available & (at4g03110 : 169.0) Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.; RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink). & (ipr012677 : 166.45947) Nucleotide-binding, alpha-beta plait & (chl4|521011 : 97.1) no description available & (gnl|cdd|47687 : 82.2) no description available & (p82277|rrp2_spiol : 60.5) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 404.4664) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42828 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7fvf4|b7fvf4_phatc' "'(gnl|cdd|36889 : 88.2) no description available & (at5g04430 : 80.9) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.; binding to TOMV RNA 1L (long form) (BTR1L); CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G15270.1); Has 5613 Blast hits to 2614 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 3980; Fungi - 530; Plants - 787; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (loc_os02g13130.3 : 75.5) no description available & (chl4|522835 : 68.2) no description available & (gnl|cdd|29002 : 59.8) no description available & (reliability: 161.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44729 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7fxe3|b7fxe3_phatc' "'(chl4|525397 : 100.0) no description available & (loc_os08g31810.3 : 99.0) no description available & (at5g04600 : 84.7) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|39409 : 76.7) no description available & (gnl|cdd|47687 : 59.1) no description available & (p28644|roc1_spiol : 41.6) 28 kDa ribonucleoprotein, chloroplast (28RNP) - Spinacia oleracea (Spinach) & (ipr012677 : 37.24184) Nucleotide-binding, alpha-beta plait & (reliability: 169.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45356 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7g2a9|b7g2a9_phatc' "'(gnl|cdd|37261 : 211.0) no description available & (chl4|513453 : 112.0) no description available & (at3g16810 : 99.4) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (loc_os03g61560.1 : 98.2) no description available & (ipr011989 : 93.04501) Armadillo-like helical & (gnl|cdd|71579 : 37.7) no description available & (reliability: 198.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47058 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7ger2|b7ger2_phatc' "'(chl4|511273 : 123.0) no description available & (ipr012677 : 113.82092) Nucleotide-binding, alpha-beta plait & (loc_os09g10760.1 : 84.0) no description available & (gnl|cdd|39413 : 82.9) no description available & (at4g34110 : 81.3) Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.; poly(A) binding protein 2 (PAB2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: response to salt stress, translational initiation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004), RNA recognition motif, RNP-1 (InterPro:IPR000504), Polyadenylate binding protein, human types 1, 2, 3, 4 (InterPro:IPR006515), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2); Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430; Bacteria - 568582; Metazoa - 213912; Fungi - 30250; Plants - 62241; Viruses - 64851; Other Eukaryotes - 27728 (source: NCBI BLink). & (gnl|cdd|84495 : 81.0) no description available & (p82277|rrp2_spiol : 79.0) Plastid-specific 30S ribosomal protein 2, chloroplast precursor (PSRP-2) - Spinacia oleracea (Spinach) & (reliability: 218.60818) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51303 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7fx33|b7fx33_phatc' "'(chl4|525923 : 82.4) no description available & (gnl|cdd|47687 : 75.3) no description available & (q08935|roc1_nicsy : 71.6) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (loc_os09g39180.1 : 67.4) no description available & (at2g37220 : 66.2) Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, poly(U) RNA binding; INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 (TAIR:AT3G53460.3); Has 997478 Blast hits to 497195 proteins in 22066 species: Archae - 21542; Bacteria - 603238; Metazoa - 188798; Fungi - 28200; Plants - 60491; Viruses - 70820; Other Eukaryotes - 24389 (source: NCBI BLink). & (gnl|cdd|35331 : 62.5) no description available & (ipr012677 : 53.757965) Nucleotide-binding, alpha-beta plait & (reliability: 132.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8269 PE=4 SV=1)'" P '27.4' 'RNA.RNA binding' 'tr|b7fxb9|b7fxb9_phatc' "'(chl4|525923 : 85.9) no description available & (at4g39260 : 79.7) Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; cold, circadian rhythm, and RNA binding 1 (CCR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: response to zinc ion, response to salt stress, response to cold, circadian rhythm, innate immune response; LOCATED IN: nucleolus, cell wall, peroxisome, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and rna binding 2 (TAIR:AT2G21660.2); Has 82664 Blast hits to 34440 proteins in 1574 species: Archae - 59; Bacteria - 22063; Metazoa - 30672; Fungi - 6267; Plants - 13203; Viruses - 1104; Other Eukaryotes - 9296 (source: NCBI BLink). & (gnl|cdd|47687 : 73.7) no description available & (q99070|grp2_sorbi : 70.5) Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (loc_os03g61990.5 : 69.3) no description available & (gnl|cdd|39408 : 66.7) no description available & (ipr012677 : 53.34512) Nucleotide-binding, alpha-beta plait & (reliability: 147.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8270 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7fqg1|b7fqg1_phatc' "'(gnl|cdd|85149 : 190.0) no description available & (gnl|cdd|36720 : 189.0) no description available & (ipr002164 : 148.3597) Nucleosome assembly protein (NAP) & (loc_os06g05660.2 : 144.0) no description available & (at4g26110 : 143.0) Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.; nucleosome assembly protein1;1 (NAP1;1); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA repair, nucleosome assembly; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein 1;3 (TAIR:AT5G56950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|526426 : 125.0) no description available & (reliability: 545.62946) & (original description: Nucleosome assembly protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NAP PE=3 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'sp|b7g7y7|fen1_phatc' "'(gnl|cdd|37730 : 331.0) no description available & (at5g26680 : 326.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (gnl|cdd|29030 : 318.0) no description available & (q9sxq6|fen1a_orysa : 308.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (loc_os05g46270.1 : 302.0) no description available & (chl4|511858 : 275.0) no description available & (ipr006085 : 61.639168) XPG N-terminal & (reliability: 652.0) & (original description: Flap endonuclease 1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FEN1 PE=3 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7gem2|b7gem2_phatc' "'(at5g11170 : 569.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g36920.1 : 564.0) no description available & (gnl|cdd|35550 : 554.0) no description available & (chl4|517489 : 500.0) no description available & (gnl|cdd|30859 : 345.0) no description available & (q40471|if4a9_tobac : 215.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (ipr011545 : 81.41146) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1138.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=helicase_5 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7fu25|b7fu25_phatc' '(gnl|cdd|35839 : 49.6) no description available & (gnl|cdd|34836 : 44.9) no description available & (chl4|512928 : 44.7) no description available & (at1g73875 : 41.2) DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G18500.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g32330.2 : 38.9) no description available & (reliability: 82.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44427 PE=4 SV=1)' P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7fz31|b7fz31_phatc' "'(gnl|cdd|30859 : 187.0) no description available & (gnl|cdd|35552 : 163.0) no description available & (loc_os09g21520.1 : 119.0) no description available & (at4g09730 : 110.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (chl4|520783 : 107.0) no description available & (p41380|if4a3_nicpl : 79.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 220.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45898 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7g370|b7g370_phatc' "'(gnl|cdd|35553 : 375.0) no description available & (gnl|cdd|30859 : 292.0) no description available & (p41382|if410_tobac : 238.0) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 237.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (loc_os02g05330.1 : 236.0) no description available & (chl4|523861 : 229.0) no description available & (ipr011545 : 63.779236) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 452.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47384 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7g3a5|b7g3a5_phatc' "'(gnl|cdd|36167 : 177.0) no description available & (gnl|cdd|34219 : 72.3) no description available & (loc_os02g50560.1 : 57.4) no description available & (chl4|511167 : 55.8) no description available & (at1g70070 : 54.7) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (reliability: 109.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47412 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7g614|b7g614_phatc' "'(gnl|cdd|85845 : 44.2) no description available & (gnl|cdd|39460 : 43.3) no description available & (o50017|parp2_maize : 40.8) Poly [ADP-ribose] polymerase 2 (EC 2.4.2.30) (PARP-2) (ADPRT 2) (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) - Zea mays (Maize) & (loc_os01g24940.1 : 39.3) no description available & (chl4|515713 : 37.4) no description available & (at2g41460 : 36.2) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 72.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48114 PE=4 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7fuz3|b7fuz3_phatc' "'(gnl|cdd|37891 : 588.0) no description available & (chl4|510084 : 536.0) no description available & (loc_os06g08770.1 : 531.0) no description available & (gnl|cdd|31417 : 520.0) no description available & (at5g67630 : 515.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr010339 : 233.63991) TIP49, C-terminal & (q5z9s8|pdr12_orysa : 38.5) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 1030.0) & (original description: RuvB-like helicase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50825 PE=3 SV=1)'" P '28.1' 'DNA.synthesis/chromatin structure' 'tr|b7g5l2|b7g5l2_phatc' "'(at2g06510 : 290.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g53680.1 : 256.0) no description available & (chl4|517486 : 195.0) no description available & (gnl|cdd|72071 : 150.0) no description available & (ipr012340 : 125.25588) Nucleic acid-binding, OB-fold & (gnl|cdd|36069 : 39.1) no description available & (reliability: 548.0) & (original description: Replication protein a large 70 kD subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPA1 PE=4 SV=1)'" P '28.1.3' 'DNA.synthesis/chromatin structure.histone' 'tr|b7g7q5|b7g7q5_phatc' "'(loc_os12g41920.3 : 50.8) no description available & (at1g49950 : 45.8) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|522082 : 45.8) no description available & (gnl|cdd|47985 : 41.4) no description available & (gnl|cdd|35483 : 38.0) no description available & (reliability: 83.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48573 PE=4 SV=1)'" P '28.1.3.1' 'DNA.synthesis/chromatin structure.histone.H1' 'tr|b7fx66|b7fx66_phatc' "'(chl4|514273 : 48.5) no description available & (p27806|h1_wheat : 47.8) Histone H1 - Triticum aestivum (Wheat) & (loc_os03g58470.1 : 45.1) no description available & (gnl|cdd|47827 : 44.5) no description available & (gnl|cdd|36189 : 42.3) no description available & (at2g30620 : 40.0) winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H5 (InterPro:IPR005819), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT1G06760.1). & (ipr011991 : 38.227657) Winged helix-turn-helix transcription repressor DNA-binding & (reliability: 80.0) & (original description: Histone linker H1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H1 PE=3 SV=1)'" P '28.1.3.1' 'DNA.synthesis/chromatin structure.histone.H1' 'tr|b7ftp2|b7ftp2_phatc' "'(gnl|cdd|47827 : 43.3) no description available & (loc_os03g58470.1 : 43.1) no description available & (p23444|h1_maize : 42.4) Histone H1 - Zea mays (Maize) & (chl4|523385 : 41.6) no description available & (ipr011991 : 40.571064) Winged helix-turn-helix transcription repressor DNA-binding & (at1g49950 : 35.8) Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.; telomere repeat binding factor 1 (TRB1); FUNCTIONS IN: DNA binding, protein homodimerization activity, sequence-specific DNA binding transcription factor activity, double-stranded telomeric DNA binding; INVOLVED IN: in 8 processes; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: telomere repeat binding factor 3 (TAIR:AT3G49850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 71.6) & (original description: N-terminal histone linker H1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44318 PE=3 SV=1)'" P '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'tr|b7g2a5|b7g2a5_phatc' "'(gnl|cdd|36968 : 172.0) no description available & (q84mp7|h2av3_orysa : 164.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (loc_os03g53190.2 : 164.0) no description available & (chl4|514278 : 162.0) no description available & (at1g52740 : 159.0) Encodes HTA9, a histone H2A protein.; histone H2A protein 9 (HTA9); FUNCTIONS IN: DNA binding; INVOLVED IN: detection of temperature stimulus, defense response to bacterium, regulation of flower development; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3910 Blast hits to 3905 proteins in 353 species: Archae - 0; Bacteria - 0; Metazoa - 2573; Fungi - 292; Plants - 612; Viruses - 4; Other Eukaryotes - 429 (source: NCBI BLink). & (gnl|cdd|28955 : 143.0) no description available & (ipr009072 : 111.140274) Histone-fold & (reliability: 318.0) & (original description: Histone H2A OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H2A-m1 PE=3 SV=1)'" P '28.1.3.2.1' 'DNA.synthesis/chromatin structure.histone.core.H2A' 'tr|b7fwr8|b7fwr8_phatc' "'(loc_os01g05970.1 : 148.0) no description available & (p16867|h2b3_volca : 133.0) Histone H2B.3 (H2B-III) - Volvox carteri & (chl4|517327 : 133.0) no description available & (gnl|cdd|47734 : 131.0) no description available & (ipr009072 : 130.71672) Histone-fold & (at5g22880 : 130.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 128.0) no description available & (reliability: 260.0) & (original description: Histone H2B OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H2B-1b PE=3 SV=1)'" P '28.1.3.2.2' 'DNA.synthesis/chromatin structure.histone.core.H2B' 'tr|b7fwr8|b7fwr8_phatc' "'(loc_os01g05970.1 : 148.0) no description available & (p16867|h2b3_volca : 133.0) Histone H2B.3 (H2B-III) - Volvox carteri & (chl4|517327 : 133.0) no description available & (gnl|cdd|47734 : 131.0) no description available & (ipr009072 : 130.71672) Histone-fold & (at5g22880 : 130.0) Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.; histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36955 : 128.0) no description available & (reliability: 260.0) & (original description: Histone H2B OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H2B-1b PE=3 SV=1)'" P '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'tr|b7g218|b7g218_phatc' "'(at4g40030 : 216.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (loc_os06g06480.1 : 207.0) no description available & (q71h73|h33_vitvi : 204.0) Histone H3.3 - Vitis vinifera (Grape) & (chl4|523146 : 204.0) no description available & (gnl|cdd|36956 : 195.0) no description available & (ipr009072 : 185.41078) Histone-fold & (gnl|cdd|47735 : 153.0) no description available & (reliability: 432.0) & (original description: Histone H3 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H3.3 PE=3 SV=1)'" P '28.1.3.2.3' 'DNA.synthesis/chromatin structure.histone.core.H3' 'tr|b7fr39|b7fr39_phatc' "'(at4g40030 : 217.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1); Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2037; Plants - 1258; Viruses - 0; Other Eukaryotes - 702 (source: NCBI BLink). & (loc_os06g06480.1 : 210.0) no description available & (chl4|523146 : 208.0) no description available & (q71h73|h33_vitvi : 205.0) Histone H3.3 - Vitis vinifera (Grape) & (gnl|cdd|36956 : 195.0) no description available & (ipr009072 : 184.33464) Histone-fold & (gnl|cdd|47735 : 153.0) no description available & (reliability: 434.0) & (original description: Histone H3 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H3-1c PE=3 SV=1)'" P '28.1.3.2.4' 'DNA.synthesis/chromatin structure.histone.core.H4' 'tr|b7fx68|b7fx68_phatc' "'(gnl|cdd|38677 : 147.0) no description available & (q71v09|h4_capan : 135.0) Histone H4 (CaH4) - Capsicum annuum (Bell pepper) & (at5g59970 : 134.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os10g39410.1 : 134.0) no description available & (chl4|523403 : 132.0) no description available & (gnl|cdd|28957 : 123.0) no description available & (ipr009072 : 114.09963) Histone-fold & (reliability: 268.0) & (original description: Histone H4 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=H4-1b PE=3 SV=1)'" P '28.2' 'DNA.repair' 'tr|b7fsn5|b7fsn5_phatc' "'(gnl|cdd|35235 : 190.0) no description available & (gnl|cdd|29207 : 90.7) no description available & (at1g79650 : 70.9) Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.; RADIATION SENSITIVE23B (RAD23B); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), XPC-binding domain (InterPro:IPR015360), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G16190.1). & (q40742|rad23_orysa : 63.2) Probable DNA repair protein RAD23 (OsRAD23) - Oryza sativa (Rice) & (loc_os09g24200.2 : 63.2) no description available & (ipr015360 : 49.781403) XPC-binding domain & (chl4|525353 : 48.5) no description available & (reliability: 141.8) & (original description: RAD23 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hRad23 PE=4 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b5y536|b5y536_phatc' "'(ipr004240 : 1500.0) Nonaspanin (TM9SF) & (gnl|cdd|36492 : 619.0) no description available & (gnl|cdd|66650 : 508.0) no description available & (loc_os08g44100.1 : 493.0) no description available & (at3g13772 : 488.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (chl4|510022 : 481.0) no description available & (reliability: 958.0) & (original description: Transmembrane 9 superfamily member OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25752 PE=3 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7g2v6|b7g2v6_phatc' "'(ipr004240 : 1500.0) Nonaspanin (TM9SF) & (gnl|cdd|36491 : 572.0) no description available & (gnl|cdd|66650 : 472.0) no description available & (chl4|511937 : 462.0) no description available & (at2g01970 : 460.0) Endomembrane protein 70 protein family; INVOLVED IN: transport; LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G14670.1); Has 1574 Blast hits to 1528 proteins in 319 species: Archae - 0; Bacteria - 2; Metazoa - 611; Fungi - 238; Plants - 459; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (loc_os10g02350.1 : 451.0) no description available & (reliability: 904.0) & (original description: Transmembrane 9 superfamily member (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13662 PE=3 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7g3a5|b7g3a5_phatc' "'(gnl|cdd|36167 : 177.0) no description available & (gnl|cdd|34219 : 72.3) no description available & (loc_os02g50560.1 : 57.4) no description available & (chl4|511167 : 55.8) no description available & (at1g70070 : 54.7) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (reliability: 105.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47412 PE=4 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7g8v3|b7g8v3_phatc' "'(gnl|cdd|84916 : 74.6) no description available & (loc_os04g45190.3 : 72.8) no description available & (gnl|cdd|35660 : 63.0) no description available & (at4g00170 : 58.5) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (chl4|521426 : 53.9) no description available & (ipr008962 : 49.52547) PapD-like & (reliability: 107.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48918 PE=4 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7gcr5|b7gcr5_phatc' "'(gnl|cdd|35624 : 212.0) no description available & (at3g48390 : 154.0) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2); Has 1943 Blast hits to 788 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 1171; Fungi - 12; Plants - 600; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). & (loc_os04g40660.3 : 147.0) no description available & (chl4|526415 : 143.0) no description available & (gnl|cdd|86147 : 98.7) no description available & (q03387|if41_wheat : 48.9) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (ipr003891 : 48.171967) Initiation factor eIF-4 gamma, MA3 & (reliability: 290.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50049 PE=4 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7fuz3|b7fuz3_phatc' "'(gnl|cdd|37891 : 588.0) no description available & (chl4|510084 : 536.0) no description available & (loc_os06g08770.1 : 531.0) no description available & (gnl|cdd|31417 : 520.0) no description available & (at5g67630 : 515.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr010339 : 233.63991) TIP49, C-terminal & (q5z9s8|pdr12_orysa : 38.5) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 1006.0) & (original description: RuvB-like helicase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50825 PE=3 SV=1)'" P '28.99' 'DNA.unspecified' 'tr|b7g0a0|b7g0a0_phatc' "'(ipr004240 : 1500.0) Nonaspanin (TM9SF) & (gnl|cdd|36492 : 574.0) no description available & (gnl|cdd|66650 : 492.0) no description available & (at2g24170 : 483.0) Endomembrane protein 70 protein family; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G10840.1); Has 1577 Blast hits to 1550 proteins in 327 species: Archae - 0; Bacteria - 11; Metazoa - 618; Fungi - 234; Plants - 447; Viruses - 0; Other Eukaryotes - 267 (source: NCBI BLink). & (loc_os06g37160.1 : 472.0) no description available & (chl4|510022 : 471.0) no description available & (q8l5c6|xip1_wheat : 35.4) Xylanase inhibitor protein 1 precursor (Class III chitinase homolog) (XIP-I protein) - Triticum aestivum (Wheat) & (reliability: 966.0) & (original description: Transmembrane 9 superfamily member (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RabX1 PE=3 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7gct7|b7gct7_phatc' "'(gnl|cdd|37452 : 157.0) no description available & (gnl|cdd|48401 : 149.0) no description available & (chl4|511872 : 142.0) no description available & (at2g40660 : 138.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: tRNA binding; INVOLVED IN: tRNA aminoacylation for protein translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 6072 Blast hits to 6060 proteins in 2115 species: Archae - 244; Bacteria - 4267; Metazoa - 483; Fungi - 217; Plants - 163; Viruses - 1; Other Eukaryotes - 697 (source: NCBI BLink). & (q9zts1|sym_orysa : 131.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (loc_os06g31210.1 : 131.0) no description available & (ipr012340 : 86.622765) Nucleic acid-binding, OB-fold & (reliability: 378.02255) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16545 PE=4 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7gdr8|b7gdr8_phatc' "'(gnl|cdd|37734 : 187.0) no description available & (at1g09150 : 150.0) pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Translation-associated RNA-binding, predicted (InterPro:IPR016437), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor SUI1 family protein (TAIR:AT1G71350.1); Has 885 Blast hits to 883 proteins in 291 species: Archae - 148; Bacteria - 0; Metazoa - 325; Fungi - 155; Plants - 86; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (loc_os01g21180.1 : 139.0) no description available & (gnl|cdd|32199 : 103.0) no description available & (chl4|520825 : 55.1) no description available & (reliability: 300.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16787 PE=4 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7frf4|b7frf4_phatc' "'(ipr002300 : 1500.0) Aminoacyl-tRNA synthetase, class Ia & (gnl|cdd|81722 : 1272.0) no description available & (loc_os02g53770.1 : 1031.0) no description available & (at5g49030 : 998.0) ovule abortion 2 (OVA2); FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1). & (gnl|cdd|35654 : 962.0) no description available & (chl4|516057 : 309.0) no description available & (reliability: 2625.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17198 PE=3 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7g3y1|b7g3y1_phatc' "'(ipr002300 : 1500.0) Aminoacyl-tRNA synthetase, class Ia & (gnl|cdd|81717 : 1197.0) no description available & (gnl|cdd|35653 : 993.0) no description available & (at5g16715 : 972.0) embryo defective 2247 (EMB2247); FUNCTIONS IN: valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Valyl-tRNA synthetase, class Ia, tRNA-binding arm (InterPro:IPR019499), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: valyl-tRNA synthetase / valine--tRNA ligase (VALRS) (TAIR:AT1G14610.1); Has 40467 Blast hits to 37894 proteins in 3157 species: Archae - 953; Bacteria - 21019; Metazoa - 839; Fungi - 772; Plants - 400; Viruses - 0; Other Eukaryotes - 16484 (source: NCBI BLink). & (chl4|524989 : 968.0) no description available & (loc_os03g48850.2 : 607.0) no description available & (q9zts1|sym_orysa : 40.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 2625.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21513 PE=3 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7g888|b7g888_phatc' "'(ipr002300 : 1500.0) Aminoacyl-tRNA synthetase, class Ia & (gnl|cdd|35655 : 1350.0) no description available & (gnl|cdd|81821 : 1183.0) no description available & (chl4|516057 : 1145.0) no description available & (at4g10320 : 1101.0) tRNA synthetase class I (I, L, M and V) family protein; FUNCTIONS IN: isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, guard cell, epidermis, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849 proteins in 3074 species: Archae - 1055; Bacteria - 22228; Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0; Other Eukaryotes - 13766 (source: NCBI BLink). & (loc_os06g43760.1 : 1077.0) no description available & (reliability: 2625.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29824 PE=3 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7fqc5|b7fqc5_phatc' "'(ipr014729 : 1500.0) Rossmann-like alpha/beta/alpha sandwich fold & (gnl|cdd|35653 : 1257.0) no description available & (gnl|cdd|81717 : 1062.0) no description available & (chl4|513629 : 987.0) no description available & (loc_os03g48850.2 : 948.0) no description available & (at1g14610 : 931.0) Required for proper proliferation of basal cells.; TWIN 2 (TWN2); FUNCTIONS IN: valine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Valyl-tRNA synthetase, class Ia (InterPro:IPR002303), Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Valyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR019754); BEST Arabidopsis thaliana protein match is: ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases (TAIR:AT5G16715.1); Has 39194 Blast hits to 36732 proteins in 3122 species: Archae - 839; Bacteria - 19755; Metazoa - 1534; Fungi - 892; Plants - 369; Viruses - 3; Other Eukaryotes - 15802 (source: NCBI BLink). & (reliability: 2625.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43016 PE=3 SV=1)'" P '29.1' 'protein.aa activation' 'tr|b7fqj6|b7fqj6_phatc' "'(gnl|cdd|80688 : 444.0) no description available & (ipr002319 : 207.56116) Phenylalanyl-tRNA synthetase & (gnl|cdd|37994 : 176.0) no description available & (chl4|518543 : 146.0) no description available & (at3g58140 : 142.0) phenylalanyl-tRNA synthetase class IIc family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA processing, phenylalanyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, mitochondrial (InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding (InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078 proteins in 3125 species: Archae - 246; Bacteria - 7816; Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0; Other Eukaryotes - 3326 (source: NCBI BLink). & (loc_os12g34860.1 : 135.0) no description available & (reliability: 363.23203) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8926 PE=3 SV=1)'" P '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'tr|b7fzq5|b7fzq5_phatc' "'(gnl|cdd|81792 : 427.0) no description available & (gnl|cdd|37834 : 322.0) no description available & (chl4|515081 : 280.0) no description available & (at3g02660 : 268.0) EMBRYO DEFECTIVE 2768 (emb2768); FUNCTIONS IN: RNA binding, tyrosine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), RNA-binding S4 (InterPro:IPR002942), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9022 Blast hits to 9013 proteins in 2715 species: Archae - 16; Bacteria - 5542; Metazoa - 116; Fungi - 145; Plants - 38; Viruses - 0; Other Eukaryotes - 3165 (source: NCBI BLink). & (loc_os01g31610.1 : 229.0) no description available & (ipr014729 : 209.55545) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 536.0) & (original description: Tyrosine--tRNA ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27323 PE=3 SV=1)'" P '29.1.1' 'protein.aa activation.tyrosine-tRNA ligase' 'tr|b7fxf6|b7fxf6_phatc' "'(at1g28350 : 379.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: translation, tyrosyl-tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, archaeal/eukaryotic cytosolic (InterPro:IPR015624), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); BEST Arabidopsis thaliana protein match is: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (TAIR:AT2G33840.1); Has 6761 Blast hits to 4745 proteins in 1539 species: Archae - 718; Bacteria - 3084; Metazoa - 577; Fungi - 521; Plants - 241; Viruses - 10; Other Eukaryotes - 1610 (source: NCBI BLink). & (loc_os08g05490.1 : 367.0) no description available & (chl4|511860 : 361.0) no description available & (gnl|cdd|37355 : 264.0) no description available & (gnl|cdd|82676 : 208.0) no description available & (ipr014729 : 156.10579) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 758.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45368 PE=4 SV=1)'" P '29.1.10' 'protein.aa activation.methionine-tRNA ligase' 'tr|b7g4v2|b7g4v2_phatc' "'(gnl|cdd|84023 : 720.0) no description available & (gnl|cdd|35657 : 514.0) no description available & (loc_os03g11120.1 : 417.0) no description available & (at3g55400 : 412.0) OVULE ABORTION 1 (OVA1); FUNCTIONS IN: methionine-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 24900 Blast hits to 23813 proteins in 3001 species: Archae - 930; Bacteria - 15835; Metazoa - 410; Fungi - 530; Plants - 181; Viruses - 3; Other Eukaryotes - 7011 (source: NCBI BLink). & (chl4|512568 : 366.0) no description available & (ipr015413 : 292.5117) Methionyl/Leucyl tRNA synthetase & (q9zts1|sym_orysa : 155.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 824.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29029 PE=3 SV=1)'" P '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'tr|b7g8g1|b7g8g1_phatc' "'(gnl|cdd|81585 : 543.0) no description available & (gnl|cdd|37720 : 313.0) no description available & (at5g27470 : 204.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o81983|sys_helan : 204.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (chl4|521268 : 204.0) no description available & (loc_os03g10190.1 : 196.0) no description available & (ipr002314 : 69.240074) Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain & (reliability: 408.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15374 PE=4 SV=1)'" P '29.1.11' 'protein.aa activation.serine-tRNA ligase' 'tr|b7gbq6|b7gbq6_phatc' "'(gnl|cdd|37720 : 475.0) no description available & (at5g27470 : 438.0) seryl-tRNA synthetase / serine--tRNA ligase; FUNCTIONS IN: serine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, seryl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: Seryl-tRNA synthetase (TAIR:AT1G11870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o81983|sys_helan : 411.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (chl4|521268 : 410.0) no description available & (loc_os01g37837.1 : 407.0) no description available & (gnl|cdd|30521 : 393.0) no description available & (ipr002314 : 66.43849) Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain & (reliability: 876.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30572 PE=4 SV=1)'" P '29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'tr|b5y3f5|b5y3f5_phatc' "'(gnl|cdd|35776 : 647.0) no description available & (loc_os02g46130.1 : 518.0) no description available & (chl4|523453 : 486.0) no description available & (at4g26870 : 478.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aspartate-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G31180.2); Has 28683 Blast hits to 22852 proteins in 2993 species: Archae - 454; Bacteria - 19619; Metazoa - 777; Fungi - 1015; Plants - 410; Viruses - 0; Other Eukaryotes - 6408 (source: NCBI BLink). & (gnl|cdd|29821 : 404.0) no description available & (ipr004364 : 168.93268) Aminoacyl-tRNA synthetase, class II (D/K/N) & (q6f2u9|syk_orysa : 51.2) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 956.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_42051 PE=3 SV=1)'" P '29.1.12' 'protein.aa activation.aspartate-tRNA ligase' 'tr|b7gd24|b7gd24_phatc' "'(gnl|cdd|35776 : 567.0) no description available & (chl4|523453 : 501.0) no description available & (loc_os02g46130.1 : 421.0) no description available & (at4g26870 : 420.0) Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aspartate-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G31180.2); Has 28683 Blast hits to 22852 proteins in 2993 species: Archae - 454; Bacteria - 19619; Metazoa - 777; Fungi - 1015; Plants - 410; Viruses - 0; Other Eukaryotes - 6408 (source: NCBI BLink). & (gnl|cdd|30367 : 359.0) no description available & (ipr004364 : 147.5886) Aminoacyl-tRNA synthetase, class II (D/K/N) & (q6f2u9|syk_orysa : 56.6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 840.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41016 PE=3 SV=1)'" P '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'tr|b7fx58|b7fx58_phatc' "'(gnl|cdd|37509 : 707.0) no description available & (chl4|522422 : 605.0) no description available & (gnl|cdd|30772 : 591.0) no description available & (at1g29880 : 587.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (loc_os08g42560.1 : 583.0) no description available & (ipr002314 : 119.970146) Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain & (reliability: 1174.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19761 PE=4 SV=1)'" P '29.1.14' 'protein.aa activation.glycine-tRNA ligase' 'tr|b7fxk7|b7fxk7_phatc' "'(gnl|cdd|81307 : 663.0) no description available & (loc_os04g32650.1 : 213.0) no description available & (gnl|cdd|37509 : 209.0) no description available & (at1g29880 : 177.0) glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink). & (chl4|522422 : 172.0) no description available & (ipr002314 : 106.63226) Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain & (reliability: 354.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50885 PE=3 SV=1)'" P '29.1.16' 'protein.aa activation.cysteine-tRNA ligase' 'tr|b7fux6|b7fux6_phatc' "'(gnl|cdd|37218 : 592.0) no description available & (gnl|cdd|30564 : 466.0) no description available & (chl4|520852 : 343.0) no description available & (at2g31170 : 263.0) SYCO ARATH; FUNCTIONS IN: cysteine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: cysteinyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cysteinyl-tRNA synthetase, class Ia (InterPro:IPR002308), Cysteinyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015803), Cysteinyl-tRNA synthetase, class Ia, DALR (InterPro:IPR015273), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Cysteinyl-tRNA synthetase, class Ia, C-terminal (InterPro:IPR015804); BEST Arabidopsis thaliana protein match is: Cysteinyl-tRNA synthetase, class Ia family protein (TAIR:AT5G38830.1); Has 10676 Blast hits to 10676 proteins in 2860 species: Archae - 252; Bacteria - 6117; Metazoa - 332; Fungi - 154; Plants - 139; Viruses - 3; Other Eukaryotes - 3679 (source: NCBI BLink). & (ipr015803 : 258.02878) Cysteinyl-tRNA synthetase, class Ia & (loc_os09g38420.1 : 256.0) no description available & (reliability: 526.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26346 PE=3 SV=1)'" P '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'tr|b7fq83|b7fq83_phatc' "'(gnl|cdd|36362 : 667.0) no description available & (loc_os01g16520.1 : 509.0) no description available & (chl4|522301 : 496.0) no description available & (at5g26710 : 481.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (gnl|cdd|81539 : 372.0) no description available & (p52780|syq_luplu : 261.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (ipr020058 : 226.85732) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain & (reliability: 962.0) & (original description: Glutamate-trna ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GluRS_1 PE=3 SV=1)'" P '29.1.17' 'protein.aa activation.glutamate-tRNA ligase' 'tr|b7gct6|b7gct6_phatc' "'(gnl|cdd|80878 : 488.0) no description available & (chl4|524211 : 442.0) no description available & (at5g64050 : 431.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g02860.1 : 430.0) no description available & (q43794|sye_tobac : 429.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|36364 : 408.0) no description available & (ipr020058 : 216.65372) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain & (reliability: 862.0) & (original description: Glutamyl-trna synthase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GluRS_2 PE=3 SV=1)'" P '29.1.18' 'protein.aa activation.glutamine-tRNA ligase' 'tr|b7fyy2|b7fyy2_phatc' "'(gnl|cdd|36363 : 571.0) no description available & (gnl|cdd|81539 : 533.0) no description available & (loc_os01g09000.1 : 444.0) no description available & (p52780|syq_luplu : 436.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (at1g25350 : 429.0) ovule abortion 9 (OVA9); CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (chl4|522301 : 225.0) no description available & (ipr020058 : 181.49876) Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain & (reliability: 858.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27385 PE=3 SV=1)'" P '29.1.19' 'protein.aa activation.arginine-tRNA ligase' 'tr|b7s469|b7s469_phatc' "'(gnl|cdd|39627 : 582.0) no description available & (chl4|511778 : 499.0) no description available & (at4g26300 : 491.0) embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). & (loc_os05g07030.1 : 476.0) no description available & (gnl|cdd|80884 : 467.0) no description available & (ipr014729 : 237.6283) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 982.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd552 PE=3 SV=1)'" P '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'tr|b7fsl5|b7fsl5_phatc' "'(gnl|cdd|37995 : 594.0) no description available & (at4g39280 : 511.0) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; FUNCTIONS IN: phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR004529), Phenylalanyl-tRNA synthetase alpha chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: phenylalanyl-tRNA synthetase class IIc family protein (TAIR:AT3G58140.1). & (chl4|519510 : 498.0) no description available & (loc_os10g26130.1 : 465.0) no description available & (gnl|cdd|81306 : 422.0) no description available & (ipr002319 : 190.70909) Phenylalanyl-tRNA synthetase & (reliability: 1022.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25331 PE=4 SV=1)'" P '29.1.20' 'protein.aa activation.phenylalanine-tRNA ligase' 'tr|b7g0g3|b7g0g3_phatc' "'(gnl|cdd|37683 : 608.0) no description available & (at1g72550 : 521.0) tRNA synthetase beta subunit family protein; FUNCTIONS IN: RNA binding, phenylalanine-tRNA ligase activity, magnesium ion binding, nucleotide binding, ATP binding; INVOLVED IN: phenylalanyl-tRNA aminoacylation, translation; LOCATED IN: phenylalanine-tRNA ligase complex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Putative DNA binding domain (InterPro:IPR009061), tRNA synthetase, B5 (InterPro:IPR005147), Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic (InterPro:IPR004531), B3/B4 tRNA-binding domain (InterPro:IPR005146); Has 5993 Blast hits to 5980 proteins in 2451 species: Archae - 257; Bacteria - 4083; Metazoa - 257; Fungi - 153; Plants - 58; Viruses - 0; Other Eukaryotes - 1185 (source: NCBI BLink). & (loc_os05g48510.1 : 519.0) no description available & (chl4|515035 : 424.0) no description available & (gnl|cdd|83112 : 362.0) no description available & (ipr005147 : 39.778824) tRNA synthetase, B5-domain & (reliability: 1042.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27709 PE=4 SV=1)'" P '29.1.21' 'protein.aa activation.histidine-tRNA ligase' 'tr|b7gdk8|b7gdk8_phatc' "'(at3g46100 : 476.0) histidyl-tRNA synthetase; Histidyl-tRNA synthetase 1 (HRS1); FUNCTIONS IN: histidine-tRNA ligase activity; INVOLVED IN: histidyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidyl-tRNA synthetase, class IIa, subgroup (InterPro:IPR015807), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Anticodon-binding (InterPro:IPR004154), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Histidyl-tRNA synthetase, class IIa (InterPro:IPR004516); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G03406.1); Has 12183 Blast hits to 12140 proteins in 2982 species: Archae - 258; Bacteria - 7725; Metazoa - 293; Fungi - 147; Plants - 90; Viruses - 0; Other Eukaryotes - 3670 (source: NCBI BLink). & (loc_os02g51830.1 : 454.0) no description available & (gnl|cdd|80464 : 343.0) no description available & (gnl|cdd|37147 : 324.0) no description available & (chl4|519275 : 230.0) no description available & (p93422|syh_orysa : 149.0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS) - Oryza sativa (Rice) & (ipr004154 : 51.796307) Anticodon-binding & (reliability: 952.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23920 PE=3 SV=1)'" P '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'tr|b7g8h8|b7g8h8_phatc' "'(gnl|cdd|81233 : 669.0) no description available & (loc_os07g30200.1 : 528.0) no description available & (gnl|cdd|35774 : 519.0) no description available & (at4g17300 : 518.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (chl4|521365 : 452.0) no description available & (ipr004364 : 158.04546) Aminoacyl-tRNA synthetase, class II (D/K/N) & (q6f2u9|syk_orysa : 36.2) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1036.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42247 PE=3 SV=1)'" P '29.1.22' 'protein.aa activation.asparagine-tRNA ligase' 'tr|b7fp41|b7fp41_phatc' "'(gnl|cdd|81233 : 651.0) no description available & (at4g17300 : 517.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (loc_os07g30200.1 : 507.0) no description available & (gnl|cdd|35774 : 500.0) no description available & (chl4|521365 : 375.0) no description available & (ipr004364 : 148.79256) Aminoacyl-tRNA synthetase, class II (D/K/N) & (q6f2u9|syk_orysa : 40.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (reliability: 1034.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8755 PE=3 SV=1)'" P '29.1.3' 'protein.aa activation.threonine-tRNA ligase' 'tr|b5y4r6|b5y4r6_phatc' "'(loc_os08g19850.1 : 743.0) no description available & (at5g26830 : 715.0) Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion.; Threonyl-tRNA synthetase; FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, threonine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: threonyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: mitochondrion, cell wall, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Threonyl-tRNA synthetase, class IIa (InterPro:IPR002320), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), TGS-like (InterPro:IPR012676), TGS (InterPro:IPR004095), Anticodon-binding (InterPro:IPR004154), Threonyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR018158); BEST Arabidopsis thaliana protein match is: threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (TAIR:AT2G04842.1); Has 19313 Blast hits to 19116 proteins in 2937 species: Archae - 413; Bacteria - 11477; Metazoa - 486; Fungi - 321; Plants - 109; Viruses - 0; Other Eukaryotes - 6507 (source: NCBI BLink). & (chl4|523328 : 699.0) no description available & (gnl|cdd|80656 : 677.0) no description available & (gnl|cdd|36850 : 617.0) no description available & (ipr002314 : 89.10767) Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain & (o81983|sys_helan : 38.9) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 1430.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18524 PE=3 SV=1)'" P '29.1.30' 'protein.aa activation.pseudouridylate synthase' 'tr|b5y592|b5y592_phatc' "'(gnl|cdd|30910 : 158.0) no description available & (gnl|cdd|37130 : 97.8) no description available & (loc_os06g50360.1 : 71.2) no description available & (at3g19440 : 69.7) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G78910.1); Has 18366 Blast hits to 18356 proteins in 2657 species: Archae - 12; Bacteria - 13665; Metazoa - 270; Fungi - 217; Plants - 245; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (chl4|518524 : 65.5) no description available & (ipr006145 : 52.622986) Pseudouridine synthase, RsuA/RluB/C/D/E/F & (reliability: 139.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10284 PE=4 SV=1)'" P '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'tr|b7fuc3|b7fuc3_phatc' "'(gnl|cdd|35658 : 1080.0) no description available & (loc_os09g32650.1 : 894.0) no description available & (at1g09620 : 856.0) ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases; FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: leucyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic (InterPro:IPR004493); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT4G04350.1); Has 16931 Blast hits to 15894 proteins in 2953 species: Archae - 757; Bacteria - 11010; Metazoa - 639; Fungi - 488; Plants - 264; Viruses - 0; Other Eukaryotes - 3773 (source: NCBI BLink). & (gnl|cdd|84063 : 571.0) no description available & (chl4|523759 : 272.0) no description available & (ipr014729 : 215.13466) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 1712.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11088 PE=3 SV=1)'" P '29.1.4' 'protein.aa activation.leucine-tRNA ligase' 'tr|b7g661|b7g661_phatc' "'(ipr014729 : 1500.0) Rossmann-like alpha/beta/alpha sandwich fold & (gnl|cdd|80643 : 1176.0) no description available & (at4g04350 : 817.0) EMBRYO DEFECTIVE 2369 (EMB2369); FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, leucine-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial (InterPro:IPR002302), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080); BEST Arabidopsis thaliana protein match is: tRNA synthetase class I (I, L, M and V) family protein (TAIR:AT5G49030.1); Has 40727 Blast hits to 36917 proteins in 3154 species: Archae - 1372; Bacteria - 23600; Metazoa - 846; Fungi - 790; Plants - 334; Viruses - 3; Other Eukaryotes - 13782 (source: NCBI BLink). & (loc_os01g03020.1 : 808.0) no description available & (gnl|cdd|35656 : 752.0) no description available & (chl4|514504 : 297.0) no description available & (q9zts1|sym_orysa : 38.5) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (reliability: 1634.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56599 PE=3 SV=1)'" P '29.1.40' 'protein.aa activation.bifunctional aminoacyl-tRNA synthetase' 'tr|b7gc21|b7gc21_phatc' "'(gnl|cdd|39365 : 660.0) no description available & (gnl|cdd|82724 : 562.0) no description available & (at3g62120 : 560.0) Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (loc_os12g25710.3 : 555.0) no description available & (chl4|509806 : 534.0) no description available & (ipr004154 : 68.01284) Anticodon-binding & (reliability: 1120.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23547 PE=3 SV=1)'" P '29.1.6' 'protein.aa activation.lysine-tRNA ligase' 'tr|b7gae4|b7gae4_phatc' "'(gnl|cdd|37096 : 683.0) no description available & (chl4|520656 : 625.0) no description available & (q6f2u9|syk_orysa : 596.0) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice) & (loc_os03g38980.1 : 596.0) no description available & (gnl|cdd|31383 : 592.0) no description available & (at3g11710 : 563.0) lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink). & (ipr004364 : 196.8284) Aminoacyl-tRNA synthetase, class II (D/K/N) & (reliability: 1126.0) & (original description: Lysine--tRNA ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42289 PE=3 SV=1)'" P '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'tr|b7g7j0|b7g7j0_phatc' "'(ipr018164 : 1500.0) Alanyl-tRNA synthetase, class IIc, N-terminal & (gnl|cdd|35409 : 926.0) no description available & (at1g50200 : 843.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (chl4|519906 : 832.0) no description available & (loc_os10g10244.1 : 821.0) no description available & (gnl|cdd|30363 : 817.0) no description available & (reliability: 1686.0) & (original description: Alanine--tRNA ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15186 PE=3 SV=1)'" P '29.1.7' 'protein.aa activation.alanine-tRNA ligase' 'tr|b7g5m3|b7g5m3_phatc' "'(ipr018164 : 1500.0) Alanyl-tRNA synthetase, class IIc, N-terminal & (gnl|cdd|35409 : 903.0) no description available & (at1g50200 : 855.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (loc_os10g10244.1 : 828.0) no description available & (gnl|cdd|80592 : 814.0) no description available & (chl4|519906 : 813.0) no description available & (reliability: 1710.0) & (original description: Alanine--tRNA ligase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47999 PE=3 SV=1)'" P '29.2' 'protein.synthesis' 'tr|b7fw69|b7fw69_phatc' "'(gnl|cdd|36456 : 148.0) no description available & (chl4|522118 : 126.0) no description available & (at1g64790 : 117.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (loc_os03g51140.1 : 106.0) no description available & (ipr011989 : 60.521137) Armadillo-like helical & (gnl|cdd|71383 : 41.8) no description available & (reliability: 234.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44942 PE=4 SV=1)'" P '29.2' 'protein.synthesis' 'tr|b7gbs0|b7gbs0_phatc' "'(ipr011989 : 1500.0) Armadillo-like helical & (at1g64790 : 808.0) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (loc_os03g51140.1 : 715.0) no description available & (chl4|510927 : 684.0) no description available & (gnl|cdd|36456 : 358.0) no description available & (gnl|cdd|34718 : 48.5) no description available & (p36875|2aaa_pea : 35.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (reliability: 1616.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49748 PE=4 SV=1)'" P '29.2.1.1.1.1.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S10' 'sp|a0t0k7|rr10_phatc' "'(gnl|cdd|79347 : 131.0) no description available & (at3g13120 : 97.4) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10 subgroup (InterPro:IPR005731), Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10 (InterPro:IPR001848). & (q9m4y3|rr10_mescr : 95.5) 30S ribosomal protein S10, chloroplast precursor - Mesembryanthemum crystallinum (Common ice plant) & (loc_os03g10060.1 : 93.6) no description available & (chl4|521403 : 75.5) no description available & (ipr001848 : 70.31543) Ribosomal protein S10 & (gnl|cdd|36118 : 52.3) no description available & (reliability: 194.8) & (original description: 30S ribosomal protein S10, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps10 PE=3 SV=1)'" P '29.2.1.1.1.1.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S11' 'sp|a0t0j9|rr11_phatc' "'(gnl|cdd|81515 : 185.0) no description available & (q9muu9|rr11_mesvi : 136.0) Chloroplast 30S ribosomal protein S11 - Mesostigma viride & (gnl|cdd|35629 : 116.0) no description available & (atcg00750 : 111.0) 30S chloroplast ribosomal protein S11; ribosomal protein S11 (RPS11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11, bacterial-type (InterPro:IPR019981), Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G52580.1). & (ipr001971 : 109.36093) Ribosomal protein S11 & (loc_osp1g00670.1 : 107.0) no description available & (chl4|523651 : 87.4) no description available & (reliability: 222.0) & (original description: 30S ribosomal protein S11, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps11 PE=3 SV=1)'" P '29.2.1.1.1.1.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S12' 'sp|a0t0k4|rr12_phatc' "'(gnl|cdd|81456 : 214.0) no description available & (p56354|rr12_chlvu : 183.0) Chloroplast 30S ribosomal protein S12 - Chlorella vulgaris (Green alga) & (atcg00905 : 175.0) chloroplast gene encoding ribosomal protein s12. The gene is located in three distinct loci on the chloroplast genome and is transpliced to make one transcript.; ribosomal protein S12C (RPS12C); CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: ribosomal protein S12B (TAIR:ATCG01230.1). & (ipr012340 : 149.76234) Nucleic acid-binding, OB-fold & (gnl|cdd|36961 : 148.0) no description available & (loc_osp1g01040.1 : 128.0) no description available & (chl4|519932 : 93.6) no description available & (reliability: 350.0) & (original description: 30S ribosomal protein S12, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps12 PE=3 SV=1)'" P '29.2.1.1.1.1.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13' 'sp|a0t0j8|rr13_phatc' "'(gnl|cdd|79349 : 162.0) no description available & (loc_os03g49710.1 : 99.0) no description available & (at5g14320 : 98.6) Ribosomal protein S13/S18 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G77750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|512714 : 89.4) no description available & (q8lpw2|rt13_soybn : 70.5) Small ribosomal subunit protein S13, mitochondrial precursor - Glycine max (Soybean) & (ipr001892 : 66.03303) Ribosomal protein S13 & (gnl|cdd|38521 : 57.6) no description available & (reliability: 197.2) & (original description: 30S ribosomal protein S13, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps13 PE=3 SV=1)'" P '29.2.1.1.1.1.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S14' 'sp|a0t0b3|rr14_phatc' "'(gnl|cdd|79291 : 147.0) no description available & (q9mur6|rr14_mesvi : 112.0) Chloroplast 30S ribosomal protein S14 - Mesostigma viride & (atcg00330 : 93.6) 30S chloroplast ribosomal protein S14; chloroplast ribosomal protein S14 (RPS14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209), Ribosomal protein S14, conserved site (InterPro:IPR018271). & (gnl|cdd|36952 : 88.9) no description available & (loc_osp1g00320.1 : 87.0) no description available & (chl4|517640 : 57.0) no description available & (ipr001209 : 53.34512) Ribosomal protein S14 & (reliability: 187.2) & (original description: 30S ribosomal protein S14, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps14 PE=3 SV=1)'" P '29.2.1.1.1.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S15' 'tr|b7fu91|b7fu91_phatc' "'(gnl|cdd|81667 : 104.0) no description available & (ipr009068 : 72.55132) S15/NS1, RNA-binding & (loc_os12g10580.1 : 68.2) no description available & (q9muk9|rr15_mesvi : 66.2) Chloroplast 30S ribosomal protein S15 - Mesostigma viride & (chl4|523132 : 59.7) no description available & (at1g80620 : 53.9) S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink). & (gnl|cdd|38026 : 53.4) no description available & (reliability: 106.2) & (original description: 30S ribosomal protein S15 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_7893 PE=3 SV=1)'" P '29.2.1.1.1.1.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S19' 'sp|a0t0i2|rr19_phatc' "'(gnl|cdd|79268 : 153.0) no description available & (q9tl19|rr19_nepol : 125.0) Chloroplast 30S ribosomal protein S19 - Nephroselmis olivacea & (atcg00820 : 111.0) Encodes a 6.8-kDa protein of the small ribosomal subunit.; ribosomal protein S19 (RPS19); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, chloroplast stroma, plastid ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934), Ribosomal protein S19, bacterial-type (InterPro:IPR005732); BEST Arabidopsis thaliana protein match is: ribosomal protein S19 (TAIR:AT5G47320.1). & (loc_osp1g01130.1 : 99.0) no description available & (gnl|cdd|36117 : 95.9) no description available & (ipr002222 : 80.76483) Ribosomal protein S19/S15 & (chl4|525543 : 60.8) no description available & (reliability: 222.0) & (original description: 30S ribosomal protein S19, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps19 PE=3 SV=1)'" P '29.2.1.1.1.1.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S2' 'sp|a0t0e0|rr2_phatc' "'(gnl|cdd|79284 : 351.0) no description available & (q9mus8|rr2_mesvi : 261.0) Chloroplast 30S ribosomal protein S2 - Mesostigma viride & (atcg00160 : 211.0) Chloroplast ribosomal protein S2; ribosomal protein S2 (RPS2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, bacteria/mitochondria/plastid (InterPro:IPR005706). & (loc_os02g24612.1 : 205.0) no description available & (ipr001865 : 182.55815) Ribosomal protein S2 & (gnl|cdd|36050 : 179.0) no description available & (chl4|509880 : 35.4) no description available & (reliability: 422.0) & (original description: 30S ribosomal protein S2, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps2 PE=3 SV=1)'" P '29.2.1.1.1.1.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S3' 'sp|a0t0i5|rr3_phatc' "'(gnl|cdd|79266 : 285.0) no description available & (q9tl20|rr3_nepol : 215.0) Chloroplast 30S ribosomal protein S3 - Nephroselmis olivacea & (atcg00800 : 159.0) encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex; RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, nucleoid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), Ribosomal protein S3, N-terminal (InterPro:IPR008282), K homology-like, alpha/beta (InterPro:IPR015946), Ribosomal protein S3, conserved site (InterPro:IPR018280), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, bacterial (InterPro:IPR005704); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome;protein binding (TAIR:ATMG00090.1). & (loc_os09g24409.1 : 131.0) no description available & (ipr001351 : 96.87109) Ribosomal protein S3, C-terminal & (chl4|518034 : 46.6) no description available & (gnl|cdd|38391 : 37.3) no description available & (reliability: 318.0) & (original description: 30S ribosomal protein S3, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps3 PE=3 SV=1)'" P '29.2.1.1.1.1.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S4' 'sp|a0t0h2|rr4_phatc' "'(gnl|cdd|79326 : 241.0) no description available & (p32975|rr4_chlvu : 181.0) Chloroplast 30S ribosomal protein S4 - Chlorella vulgaris (Green alga) & (atcg00380 : 176.0) Chloroplast encoded ribosomal protein S4; chloroplast ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4, bacterial-type (InterPro:IPR005709). & (loc_osp1g00360.1 : 166.0) no description available & (gnl|cdd|38511 : 87.0) no description available & (ipr001912 : 48.258976) Ribosomal protein S4/S9, N-terminal & (chl4|525216 : 47.0) no description available & (reliability: 352.0) & (original description: 30S ribosomal protein S4, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps4 PE=3 SV=1)'" P '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'tr|b7fps3|b7fps3_phatc' "'(gnl|cdd|30447 : 113.0) no description available & (gnl|cdd|37857 : 68.6) no description available & (loc_os03g34040.1 : 57.0) no description available & (at1g64880 : 48.9) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, Golgi apparatus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal (InterPro:IPR013810); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT2G33800.1); Has 12743 Blast hits to 11445 proteins in 2840 species: Archae - 327; Bacteria - 5337; Metazoa - 1616; Fungi - 508; Plants - 194; Viruses - 58; Other Eukaryotes - 4703 (source: NCBI BLink). & (q9st69|rr5_spiol : 47.8) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (chl4|516234 : 40.0) no description available & (reliability: 94.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42848 PE=3 SV=1)'" P '29.2.1.1.1.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5' 'sp|a0t0j5|rr5_phatc' "'(gnl|cdd|79350 : 193.0) no description available & (at2g33800 : 145.0) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to cadmium ion, response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5, bacterial-type (InterPro:IPR005712), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G64880.1); Has 8967 Blast hits to 8967 proteins in 2880 species: Archae - 262; Bacteria - 5121; Metazoa - 552; Fungi - 265; Plants - 165; Viruses - 0; Other Eukaryotes - 2602 (source: NCBI BLink). & (q9st69|rr5_spiol : 143.0) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (loc_os03g34040.1 : 137.0) no description available & (chl4|516234 : 120.0) no description available & (gnl|cdd|36095 : 89.3) no description available & (ipr014721 : 57.30226) Ribosomal protein S5 domain 2-type fold, subgroup & (reliability: 290.0) & (original description: 30S ribosomal protein S5, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps5 PE=3 SV=1)'" P '29.2.1.1.1.1.530' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S30A' 'tr|b7ge66|b7ge66_phatc' "'(at5g24490 : 99.4) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 92.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (loc_os03g63950.1 : 83.6) no description available & (gnl|cdd|29642 : 77.9) no description available & (chl4|522503 : 75.1) no description available & (ipr003489 : 42.87365) Ribosomal protein S30Ae/sigma 54 modulation protein & (reliability: 198.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16962 PE=4 SV=1)'" P '29.2.1.1.1.1.7' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S7' 'sp|a0t0k5|rr7_phatc' "'(gnl|cdd|79271 : 228.0) no description available & (q9mup1|rr7_mesvi : 177.0) Chloroplast 30S ribosomal protein S7 - Mesostigma viride & (atcg00900 : 153.0) encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex; RPS7.1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, bacterial-type (InterPro:IPR005717), Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein S7 (TAIR:ATCG01240.1). & (loc_osp1g01050.1 : 128.0) no description available & (gnl|cdd|38501 : 125.0) no description available & (ipr000235 : 124.33959) Ribosomal protein S5/S7 & (chl4|523702 : 52.4) no description available & (reliability: 306.0) & (original description: 30S ribosomal protein S7, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps7 PE=3 SV=1)'" P '29.2.1.1.1.1.8' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S8' 'sp|a0t0j2|rr8_phatc' "'(gnl|cdd|79260 : 196.0) no description available & (q6yxl1|rr8_phypa : 144.0) Chloroplast 30S ribosomal protein S8 - Physcomitrella patens (Moss) & (atcg00770 : 115.0) chloroplast 30S ribosomal protein S8; ribosomal protein S8 (RPS8); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid small ribosomal subunit, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630). & (loc_osp1g00700.1 : 109.0) no description available & (ipr000630 : 106.365204) Ribosomal protein S8 & (gnl|cdd|36965 : 72.6) no description available & (reliability: 230.0) & (original description: 30S ribosomal protein S8, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps8 PE=3 SV=1)'" P '29.2.1.1.1.1.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S9' 'sp|a0t0k2|rr9_phatc' "'(gnl|cdd|79296 : 178.0) no description available & (q9muv1|rr9_mesvi : 157.0) Chloroplast 30S ribosomal protein S9 - Mesostigma viride & (at1g74970 : 124.0) ribosomal protein S9, nuclear encoded component of the chloroplast ribosome; ribosomal protein S9 (RPS9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S9, conserved site (InterPro:IPR020574); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G49080.1); Has 7998 Blast hits to 7997 proteins in 2816 species: Archae - 205; Bacteria - 5347; Metazoa - 103; Fungi - 127; Plants - 149; Viruses - 0; Other Eukaryotes - 2067 (source: NCBI BLink). & (gnl|cdd|36910 : 117.0) no description available & (loc_os03g55930.1 : 116.0) no description available & (ipr014721 : 101.967674) Ribosomal protein S5 domain 2-type fold, subgroup & (chl4|519127 : 65.9) no description available & (reliability: 248.0) & (original description: 30S ribosomal protein S9, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps9 PE=3 SV=1)'" P '29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'tr|b7g736|b7g736_phatc' "'(gnl|cdd|81579 : 174.0) no description available & (q9le95|rk1_spiol : 115.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (at3g63490 : 108.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g32220.1 : 108.0) no description available & (ipr002143 : 104.14396) Ribosomal protein L1 & (gnl|cdd|36782 : 102.0) no description available & (chl4|518740 : 101.0) no description available & (reliability: 216.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14915 PE=4 SV=1)'" P '29.2.1.1.1.2.1' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L1' 'sp|a0t0c1|rk1_phatc' "'(gnl|cdd|79341 : 327.0) no description available & (at3g63490 : 249.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: chloroplast thylakoid membrane, ribosome, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 3-layer alpha/beta-sandwich (InterPro:IPR016095), Ribosomal protein L1, bacterial-type (InterPro:IPR005878); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g32220.1 : 241.0) no description available & (chl4|518740 : 238.0) no description available & (q9le95|rk1_spiol : 230.0) 50S ribosomal protein L1, chloroplast precursor (CL1) - Spinacia oleracea (Spinach) & (ipr002143 : 168.80206) Ribosomal protein L1 & (gnl|cdd|36782 : 152.0) no description available & (reliability: 498.0) & (original description: 50S ribosomal protein L1, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl1 PE=3 SV=1)'" P '29.2.1.1.1.2.10' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L10' 'tr|b7g672|b7g672_phatc' "'(gnl|cdd|80511 : 113.0) no description available & (o80362|rk10_tobac : 92.0) 50S ribosomal protein L10, chloroplast precursor (CL10) - Nicotiana tabacum (Common tobacco) & (loc_os03g17580.1 : 91.3) no description available & (at5g13510 : 90.9) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G12370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|523319 : 68.2) no description available & (ipr001790 : 36.099422) Ribosomal protein L10/acidic P0 & (reliability: 181.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14715 PE=3 SV=1)'" P '29.2.1.1.1.2.11' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L11' 'sp|a0t0c2|rk11_phatc' "'(gnl|cdd|80543 : 210.0) no description available & (at1g32990 : 162.0) mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11; plastid ribosomal protein l11 (PRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT5G51610.1); Has 8526 Blast hits to 8526 proteins in 2812 species: Archae - 305; Bacteria - 5419; Metazoa - 123; Fungi - 122; Plants - 106; Viruses - 0; Other Eukaryotes - 2451 (source: NCBI BLink). & (p31164|rk11_spiol : 161.0) 50S ribosomal protein L11, chloroplast precursor (CL11) - Spinacia oleracea (Spinach) & (chl4|509695 : 159.0) no description available & (loc_os03g03020.1 : 152.0) no description available & (gnl|cdd|38467 : 133.0) no description available & (ipr020784 : 76.23377) Ribosomal protein L11, N-terminal & (reliability: 324.0) & (original description: 50S ribosomal protein L11, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl11 PE=3 SV=1)'" P '29.2.1.1.1.2.12' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12' 'sp|a0t0c0|rk12_phatc' "'(gnl|cdd|79300 : 137.0) no description available & (gnl|cdd|36927 : 95.5) no description available & (q9tl30|rk12_nepol : 82.8) Chloroplast 50S ribosomal protein L12 - Nephroselmis olivacea & (chl4|514573 : 64.7) no description available & (ipr014719 : 63.30923) Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like & (at3g27830 : 62.4) 50S ribosomal protein L12-A; ribosomal protein L12-A (RPL12-A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: cotyledon, juvenile leaf, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7/L12 (InterPro:IPR000206), Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, oligomerisation (InterPro:IPR008932), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: ribosomal protein L12-C (TAIR:AT3G27850.1); Has 8536 Blast hits to 8536 proteins in 2747 species: Archae - 0; Bacteria - 5673; Metazoa - 193; Fungi - 128; Plants - 248; Viruses - 0; Other Eukaryotes - 2294 (source: NCBI BLink). & (loc_os01g47330.1 : 53.9) no description available & (reliability: 124.8) & (original description: 50S ribosomal protein L12, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl12 PE=3 SV=1)'" P '29.2.1.1.1.2.13' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L13' 'tr|a0t0k1|a0t0k1_phatc' "'(gnl|cdd|82862 : 125.0) no description available & (chl4|523133 : 99.8) no description available & (loc_os01g54540.1 : 87.8) no description available & (at1g78630 : 84.7) embryo defective 1473 (emb1473); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: thylakoid, ribosome, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT3G01790.2); Has 8725 Blast hits to 8725 proteins in 2839 species: Archae - 248; Bacteria - 5258; Metazoa - 358; Fungi - 293; Plants - 251; Viruses - 0; Other Eukaryotes - 2317 (source: NCBI BLink). & (p12629|rk13_spiol : 83.6) 50S ribosomal protein L13, chloroplast precursor (CL13) - Spinacia oleracea (Spinach) & (gnl|cdd|38413 : 79.7) no description available & (ipr005822 : 71.90777) Ribosomal protein L13 & (reliability: 169.4) & (original description: 50S ribosomal protein L13, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl13 PE=3 SV=1)'" P '29.2.1.1.1.2.14' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L14' 'sp|a0t0i9|rk14_phatc' "'(gnl|cdd|79274 : 197.0) no description available & (q9tl22|rk14_nepol : 150.0) Chloroplast 50S ribosomal protein L14 - Nephroselmis olivacea & (loc_osp1g00710.1 : 132.0) no description available & (atcg00780 : 130.0) encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex; ribosomal protein L14 (RPL14); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14, bacterial-type (InterPro:IPR005745), Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT5G46160.2). & (ipr000218 : 118.858955) Ribosomal protein L14b/L23e & (gnl|cdd|36119 : 113.0) no description available & (chl4|521882 : 60.1) no description available & (reliability: 260.0) & (original description: 50S ribosomal protein L14, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl14 PE=3 SV=1)'" P '29.2.1.1.1.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L15' 'tr|b7ftv7|b7ftv7_phatc' "'(gnl|cdd|81651 : 150.0) no description available & (chl4|515215 : 124.0) no description available & (at3g25920 : 118.0) encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex; ribosomal protein L15 (RPL15); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G64670.1); Has 7744 Blast hits to 7744 proteins in 2658 species: Archae - 15; Bacteria - 5386; Metazoa - 72; Fungi - 86; Plants - 90; Viruses - 0; Other Eukaryotes - 2095 (source: NCBI BLink). & (p31165|rk15_pea : 116.0) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (gnl|cdd|36064 : 108.0) no description available & (loc_os03g12020.1 : 100.0) no description available & (ipr021131 : 37.57533) Ribosomal protein L18e/L15P & (reliability: 236.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10774 PE=3 SV=1)'" P '29.2.1.1.1.2.16' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L16' 'sp|a0t0i6|rk16_phatc' "'(gnl|cdd|79262 : 231.0) no description available & (q5sd18|rk16_huplu : 187.0) Chloroplast 50S ribosomal protein L16 - Huperzia lucidula (Shining clubmoss) (Lycopodium lucidulum) & (atcg00790 : 182.0) chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit; ribosomal protein L16 (RPL16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L16 (InterPro:IPR000114), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L16, conserved site (InterPro:IPR020798); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1). & (loc_osp1g00720.1 : 174.0) no description available & (gnl|cdd|38632 : 146.0) no description available & (ipr016180 : 114.541466) Ribosomal protein L10e/L16 & (chl4|514944 : 85.1) no description available & (reliability: 364.0) & (original description: 50S ribosomal protein L16, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl16 PE=3 SV=1)'" P '29.2.1.1.1.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L17' 'tr|b7fp95|b7fp95_phatc' "'(gnl|cdd|81650 : 156.0) no description available & (at3g54210 : 155.0) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 8019 Blast hits to 8019 proteins in 2737 species: Archae - 0; Bacteria - 5501; Metazoa - 121; Fungi - 128; Plants - 120; Viruses - 0; Other Eukaryotes - 2149 (source: NCBI BLink). & (o80363|rk17_tobac : 152.0) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (loc_os03g60100.1 : 140.0) no description available & (chl4|519173 : 133.0) no description available & (gnl|cdd|38490 : 113.0) no description available & (ipr000456 : 102.66082) Ribosomal protein L17 & (reliability: 310.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8720 PE=3 SV=1)'" P '29.2.1.1.1.2.18' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L18' 'sp|a0t0j4|rk18_phatc' "'(gnl|cdd|79351 : 147.0) no description available & (q8say0|rk18_orysa : 116.0) 50S ribosomal protein L18, chloroplast precursor (CL18) - Oryza sativa (Rice) & (loc_os03g61260.2 : 116.0) no description available & (chl4|511699 : 108.0) no description available & (at1g48350 : 102.0) Ribosomal L18p/L5e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18/L5 (InterPro:IPR005484), Ribosomal protein L18, bacterial (InterPro:IPR004389); BEST Arabidopsis thaliana protein match is: Ribosomal L18p/L5e family protein (TAIR:AT1G14205.1); Has 7344 Blast hits to 7344 proteins in 2490 species: Archae - 0; Bacteria - 5225; Metazoa - 1; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 2003 (source: NCBI BLink). & (ipr005484 : 77.00696) Ribosomal protein L18/L5 & (reliability: 204.0) & (original description: 50S ribosomal protein L18, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl18 PE=3 SV=1)'" P '29.2.1.1.1.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L19' 'tr|b7fqm0|b7fqm0_phatc' "'(gnl|cdd|79301 : 58.7) no description available & (loc_os02g11030.1 : 53.5) no description available & (gnl|cdd|36911 : 53.4) no description available & (at4g11630 : 52.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9tjq7|rk19_prowi : 47.0) Plastid 50S ribosomal protein L19 - Prototheca wickerhamii & (chl4|517818 : 39.7) no description available & (reliability: 103.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9259 PE=4 SV=1)'" P '29.2.1.1.1.2.2' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L2' 'sp|a0t0i1|rk2_phatc' "'(gnl|cdd|79270 : 422.0) no description available & (q9mut9|rk2_mesvi : 310.0) Chloroplast 50S ribosomal protein L2 - Mesostigma viride & (atcg01310 : 268.0) encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex; ribosomal protein L2 (RPL2.2); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2 (InterPro:IPR002171), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG00830.1). & (loc_osp1g01100.1 : 256.0) no description available & (gnl|cdd|35659 : 231.0) no description available & (chl4|524955 : 165.0) no description available & (ipr022669 : 121.161545) Ribosomal protein L2, C-terminal & (reliability: 536.0) & (original description: 50S ribosomal protein L2, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl2 PE=3 SV=1)'" P '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'tr|b5y5i6|b5y5i6_phatc' "'(gnl|cdd|81640 : 83.9) no description available & (chl4|525843 : 68.2) no description available & (gnl|cdd|36899 : 62.3) no description available & (at4g30930 : 48.1) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g48410.1 : 47.0) no description available & (p24613|rk21_spiol : 37.0) 50S ribosomal protein L21, chloroplast precursor (CL21) (CS-L7) - Spinacia oleracea (Spinach) & (ipr001787 : 35.21212) Ribosomal protein L21 & (reliability: 96.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_33523 PE=3 SV=1)'" P '29.2.1.1.1.2.21' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L21' 'sp|a0t0g3|rk21_phatc' "'(gnl|cdd|79292 : 143.0) no description available & (chl4|523868 : 100.0) no description available & (ipr001787 : 71.197815) Ribosomal protein L21 & (p06387|rk21_marpo : 62.4) Chloroplast 50S ribosomal protein L21 - Marchantia polymorpha (Liverwort) & (gnl|cdd|36899 : 62.0) no description available & (loc_os05g48410.1 : 58.5) no description available & (at4g30930 : 54.3) Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).; NUCLEAR FUSION DEFECTIVE 1 (NFD1); FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, karyogamy, embryo sac development, double fertilization forming a zygote and endosperm, pollen development; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L21, conserved site (InterPro:IPR018258), Ribosomal protein L21 (InterPro:IPR001787); BEST Arabidopsis thaliana protein match is: Ribosomal protein L21 (TAIR:AT1G35680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 108.6) & (original description: 50S ribosomal protein L21, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl21 PE=3 SV=1)'" P '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'tr|b7gei3|b7gei3_phatc' "'(gnl|cdd|48343 : 77.5) no description available & (gnl|cdd|36923 : 70.4) no description available & (loc_os01g42980.1 : 62.4) no description available & (at4g28360 : 55.1) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: mitochondrion, ribosome; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G52370.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr001063 : 49.781403) Ribosomal protein L22/L17 & (chl4|522617 : 39.3) no description available & (q5sd20|rk22_huplu : 37.7) Chloroplast 50S ribosomal protein L22 - Huperzia lucidula (Shining clubmoss) (Lycopodium lucidulum) & (reliability: 110.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8024 PE=3 SV=1)'" P '29.2.1.1.1.2.22' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L22' 'sp|a0t0i4|rk22_phatc' "'(gnl|cdd|79252 : 174.0) no description available & (q8m9u9|rk22_chagl : 139.0) Chloroplast 50S ribosomal protein L22 - Chaetosphaeridium globosum & (atcg00810 : 126.0) encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex; ribosomal protein L22 (RPL22); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: plastid large ribosomal subunit, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22, bacterial-type (InterPro:IPR005727), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT4G28360.1). & (chl4|514555 : 114.0) no description available & (gnl|cdd|36923 : 99.7) no description available & (ipr001063 : 94.41604) Ribosomal protein L22/L17 & (loc_osp1g00740.1 : 89.4) no description available & (reliability: 252.0) & (original description: 50S ribosomal protein L22, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl22 PE=3 SV=1)'" P '29.2.1.1.1.2.23' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L23' 'sp|a0t0i0|rk23_phatc' "'(q9mut8|rk23_mesvi : 103.0) Chloroplast 50S ribosomal protein L23 - Mesostigma viride & (gnl|cdd|84663 : 98.1) no description available & (atcg01300 : 72.4) One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex; ribosomal protein L23 (RPL23.2); CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L25, conserved site (InterPro:IPR001014), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); BEST Arabidopsis thaliana protein match is: ribosomal protein L23.1 (TAIR:ATCG00840.1). & (ipr012677 : 71.46352) Nucleotide-binding, alpha-beta plait & (loc_osp1g01090.1 : 70.5) no description available & (gnl|cdd|36962 : 46.9) no description available & (chl4|523525 : 39.7) no description available & (reliability: 144.8) & (original description: 50S ribosomal protein L23, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl23 PE=3 SV=1)'" P '29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'tr|b5y4k4|b5y4k4_phatc' "'(gnl|cdd|80437 : 254.0) no description available & (gnl|cdd|38351 : 237.0) no description available & (at3g17465 : 217.0) encodes a putative L3 ribosomal protein targeted to the plastid.; ribosomal protein L3 plastid (RPL3P); CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L3 family protein (TAIR:AT2G43030.1); Has 8719 Blast hits to 8719 proteins in 2855 species: Archae - 267; Bacteria - 5444; Metazoa - 136; Fungi - 140; Plants - 91; Viruses - 0; Other Eukaryotes - 2641 (source: NCBI BLink). & (loc_os01g14830.1 : 209.0) no description available & (chl4|511068 : 174.0) no description available & (o80360|rk3_tobac : 112.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (ipr000597 : 73.82198) Ribosomal protein L3 & (reliability: 434.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10617 PE=3 SV=1)'" P '29.2.1.1.1.2.3' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L3' 'sp|a0t0h8|rk3_phatc' "'(gnl|cdd|79355 : 298.0) no description available & (gnl|cdd|38351 : 212.0) no description available & (loc_os02g04460.1 : 188.0) no description available & (o80360|rk3_tobac : 179.0) 50S ribosomal protein L3, chloroplast precursor (Fragment) - Nicotiana tabacum (Common tobacco) & (at2g43030 : 177.0) Ribosomal protein L3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, bacterial/organelle-type (InterPro:IPR019927), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein L3 plastid (TAIR:AT3G17465.1); Has 8745 Blast hits to 8744 proteins in 2878 species: Archae - 254; Bacteria - 5494; Metazoa - 134; Fungi - 132; Plants - 92; Viruses - 0; Other Eukaryotes - 2639 (source: NCBI BLink). & (chl4|511068 : 115.0) no description available & (ipr000597 : 93.27459) Ribosomal protein L3 & (reliability: 354.0) & (original description: 50S ribosomal protein L3, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl3 PE=3 SV=1)'" P '29.2.1.1.1.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L4' 'sp|a0t0h9|rk4_phatc' "'(gnl|cdd|79358 : 250.0) no description available & (gnl|cdd|36837 : 128.0) no description available & (ipr002136 : 117.24952) Ribosomal protein L4/L1e & (o49937|rk4_spiol : 116.0) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (chl4|512402 : 116.0) no description available & (loc_os03g15870.1 : 114.0) no description available & (at1g07320 : 95.1) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 190.2) & (original description: 50S ribosomal protein L4, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl4 PE=3 SV=1)'" P '29.2.1.1.1.2.5' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L5' 'sp|a0t0j1|rk5_phatc' "'(gnl|cdd|79295 : 224.0) no description available & (q9tl23|rk5_nepol : 158.0) Chloroplast 50S ribosomal protein L5 - Nephroselmis olivacea & (gnl|cdd|35619 : 127.0) no description available & (at4g01310 : 123.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (ipr022803 : 117.462296) Ribosomal protein L5 domain & (loc_os03g03360.1 : 108.0) no description available & (chl4|511164 : 43.9) no description available & (reliability: 246.0) & (original description: 50S ribosomal protein L5, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl5 PE=3 SV=1)'" P '29.2.1.1.1.2.6' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L6' 'sp|a0t0j3|rk6_phatc' "'(gnl|cdd|81626 : 234.0) no description available & (at1g05190 : 166.0) embryo defective 2394 (emb2394); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast, large ribosomal subunit, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, bacterial-type (InterPro:IPR019906), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site (InterPro:IPR002358); BEST Arabidopsis thaliana protein match is: ribosomal protein L6 family protein (TAIR:AT2G18400.1); Has 8498 Blast hits to 8498 proteins in 2848 species: Archae - 226; Bacteria - 5468; Metazoa - 15; Fungi - 189; Plants - 125; Viruses - 0; Other Eukaryotes - 2475 (source: NCBI BLink). & (loc_os03g54040.1 : 157.0) no description available & (gnl|cdd|38464 : 144.0) no description available & (chl4|526418 : 138.0) no description available & (ipr020040 : 86.756294) Ribosomal protein L6, alpha-beta domain & (p46748|rm06_prowi : 81.6) Mitochondrial 60S ribosomal protein L6 - Prototheca wickerhamii & (reliability: 332.0) & (original description: 50S ribosomal protein L6, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl6 PE=3 SV=1)'" P '29.2.1.1.1.2.9' 'protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L9' 'tr|b7g1a9|b7g1a9_phatc' "'(gnl|cdd|80541 : 57.8) no description available & (gnl|cdd|39807 : 45.8) no description available & (q8l803|rk9_wheat : 39.3) 50S ribosomal protein L9, chloroplast precursor (CL9) - Triticum aestivum (Wheat) & (loc_os02g57670.2 : 37.4) no description available & (at3g44890 : 36.2) Plastid ribosomal protein CL9; ribosomal protein L9 (RPL9); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, plastid large ribosomal subunit, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9, bacteria/chloroplast (InterPro:IPR020594), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 7269 Blast hits to 7269 proteins in 2533 species: Archae - 0; Bacteria - 5393; Metazoa - 2; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 1796 (source: NCBI BLink). & (reliability: 72.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36420 PE=4 SV=1)'" P '29.2.1.1.2.1.29' 'protein.synthesis.ribosomal protein.prokaryotic.mitochondrion.30S subunit.S29' 'tr|b5y3s8|b5y3s8_phatc' "'(gnl|cdd|39131 : 56.1) no description available & (at1g16870 : 42.4) mitochondrial 28S ribosomal protein S29-related; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23/S29, mitochondrial (InterPro:IPR019368); Has 239 Blast hits to 239 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (chl4|521002 : 39.3) no description available & (loc_os07g10300.3 : 37.7) no description available & (ipr019368 : 37.35219) Ribosomal protein S23/S29, mitochondrial & (reliability: 84.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46790 PE=4 SV=1)'" P '29.2.1.1.3.1.1' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1' 'tr|b7fu58|b7fu58_phatc' "'(gnl|cdd|82218 : 300.0) no description available & (p29344|rr1_spiol : 255.0) 30S ribosomal protein S1, chloroplast precursor (CS1) - Spinacia oleracea (Spinach) & (at5g30510 : 254.0) ribosomal protein S1 (RPS1); FUNCTIONS IN: RNA binding; LOCATED IN: thylakoid, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding proteins superfamily (TAIR:AT1G71720.1); Has 27453 Blast hits to 18967 proteins in 2720 species: Archae - 77; Bacteria - 20681; Metazoa - 178; Fungi - 177; Plants - 343; Viruses - 0; Other Eukaryotes - 5997 (source: NCBI BLink). & (loc_os03g20100.1 : 230.0) no description available & (chl4|525976 : 201.0) no description available & (ipr012340 : 96.52625) Nucleic acid-binding, OB-fold & (gnl|cdd|36288 : 58.9) no description available & (reliability: 508.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10847 PE=4 SV=1)'" P '29.2.1.1.3.1.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S15' 'tr|b7fu91|b7fu91_phatc' "'(gnl|cdd|81667 : 104.0) no description available & (ipr009068 : 72.55132) S15/NS1, RNA-binding & (loc_os12g10580.1 : 68.2) no description available & (q9muk9|rr15_mesvi : 66.2) Chloroplast 30S ribosomal protein S15 - Mesostigma viride & (chl4|523132 : 59.7) no description available & (at1g80620 : 53.9) S15/NS1, RNA-binding protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: small ribosomal subunit, ribosome, intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15 (InterPro:IPR000589), Ribosomal protein S15, bacterial-type (InterPro:IPR005290), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: S15/NS1, RNA-binding protein (TAIR:AT1G15810.1); Has 7972 Blast hits to 7972 proteins in 2715 species: Archae - 0; Bacteria - 5433; Metazoa - 85; Fungi - 116; Plants - 310; Viruses - 0; Other Eukaryotes - 2028 (source: NCBI BLink). & (gnl|cdd|38026 : 53.4) no description available & (reliability: 107.8) & (original description: 30S ribosomal protein S15 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_7893 PE=3 SV=1)'" P '29.2.1.1.3.1.16' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S16' 'sp|q5d704|rr16_phatc' "'(gnl|cdd|80466 : 92.8) no description available & (gnl|cdd|38629 : 75.8) no description available & (chl4|512724 : 63.2) no description available & (ipr000307 : 62.804676) Ribosomal protein S16 & (at4g34620 : 57.0) Encodes ribosomal protein S16, has embryo-defective lethal mutant phenotype; small subunit ribosomal protein 16 (SSR16); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: Ribosomal protein S16 family protein (TAIR:AT5G56940.1); Has 8683 Blast hits to 8683 proteins in 3031 species: Archae - 0; Bacteria - 5404; Metazoa - 128; Fungi - 129; Plants - 717; Viruses - 0; Other Eukaryotes - 2305 (source: NCBI BLink). & (q9mur5|rr16_mesvi : 57.0) Chloroplast 30S ribosomal protein S16 - Mesostigma viride & (loc_os08g40610.1 : 48.1) no description available & (reliability: 114.0) & (original description: 30S ribosomal protein S16, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps16 PE=3 SV=1)'" P '29.2.1.1.3.1.21' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S21' 'tr|b7fqc3|b7fqc3_phatc' "'(at3g27160 : 38.5) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|64997 : 36.8) no description available & (loc_os02g09590.1 : 35.0) no description available & (reliability: 77.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8802 PE=3 SV=1)'" P '29.2.1.1.3.1.5' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S5' 'tr|b7fps3|b7fps3_phatc' "'(gnl|cdd|30447 : 113.0) no description available & (gnl|cdd|37857 : 68.6) no description available & (loc_os03g34040.1 : 57.0) no description available & (at1g64880 : 48.9) Ribosomal protein S5 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, Golgi apparatus, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal (InterPro:IPR013810); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT2G33800.1); Has 12743 Blast hits to 11445 proteins in 2840 species: Archae - 327; Bacteria - 5337; Metazoa - 1616; Fungi - 508; Plants - 194; Viruses - 58; Other Eukaryotes - 4703 (source: NCBI BLink). & (q9st69|rr5_spiol : 47.8) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (chl4|516234 : 40.0) no description available & (reliability: 97.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42848 PE=3 SV=1)'" P '29.2.1.1.3.1.6' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S6' 'sp|a0t0l0|rr6_phatc' "'(gnl|cdd|85336 : 91.0) no description available & (loc_os12g37610.1 : 43.1) no description available & (ipr014717 : 40.222755) Translation elongation factor EF1B/ribosomal protein S6 & (at3g17170 : 38.9) REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 13593 Blast hits to 10425 proteins in 2441 species: Archae - 19; Bacteria - 4805; Metazoa - 3511; Fungi - 908; Plants - 375; Viruses - 253; Other Eukaryotes - 3722 (source: NCBI BLink). & (chl4|513278 : 38.5) no description available & (p82403|rr6_spiol : 38.1) 30S ribosomal protein S6 alpha, chloroplast precursor [Contains: 30S ribosomal protein S6 beta; 30S ribosomal protein S6 gamma; 30S ribosomal protein S6 delta; 30S ribosomal protein S6 epsilon] (Fragment) - Spinacia oleracea (Spinach) & (reliability: 77.8) & (original description: 30S ribosomal protein S6, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps6 PE=3 SV=1)'" P '29.2.1.1.3.2.15' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L15' 'tr|b7g1s0|b7g1s0_phatc' "'(gnl|cdd|36064 : 159.0) no description available & (gnl|cdd|81651 : 143.0) no description available & (at5g64670 : 112.0) Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, bacterial-type (InterPro:IPR005749); BEST Arabidopsis thaliana protein match is: ribosomal protein L15 (TAIR:AT3G25920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os08g21840.1 : 102.0) no description available & (chl4|515215 : 61.2) no description available & (p31165|rk15_pea : 58.2) 50S ribosomal protein L15, chloroplast precursor (CL15) (Fragment) - Pisum sativum (Garden pea) & (ipr021131 : 45.358555) Ribosomal protein L18e/L15P & (reliability: 224.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_5769 PE=3 SV=1)'" P '29.2.1.1.3.2.17' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L17' 'tr|b7g099|b7g099_phatc' "'(gnl|cdd|81650 : 137.0) no description available & (gnl|cdd|38490 : 95.8) no description available & (ipr000456 : 95.678955) Ribosomal protein L17 & (loc_os05g38580.2 : 92.4) no description available & (at5g64650 : 88.6) Ribosomal protein L17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L17 (InterPro:IPR000456); BEST Arabidopsis thaliana protein match is: Ribosomal protein L17 family protein (TAIR:AT5G09770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|521093 : 69.7) no description available & (o80363|rk17_tobac : 65.1) 50S ribosomal protein L17, chloroplast precursor (CL17) - Nicotiana tabacum (Common tobacco) & (reliability: 177.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27659 PE=3 SV=1)'" P '29.2.1.1.3.2.19' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L19' 'tr|b7fqm0|b7fqm0_phatc' "'(gnl|cdd|79301 : 58.7) no description available & (loc_os02g11030.1 : 53.5) no description available & (gnl|cdd|36911 : 53.4) no description available & (at4g11630 : 52.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (q9tjq7|rk19_prowi : 47.0) Plastid 50S ribosomal protein L19 - Prototheca wickerhamii & (chl4|517818 : 39.7) no description available & (reliability: 104.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9259 PE=4 SV=1)'" P '29.2.1.1.3.2.20' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L20' 'sp|a0t0f6|rk20_phatc' "'(gnl|cdd|81464 : 141.0) no description available & (q9mup7|rk20_mesvi : 116.0) Chloroplast 50S ribosomal protein L20 - Mesostigma viride & (ipr005813 : 97.3625) Ribosomal protein L20 & (gnl|cdd|39905 : 85.0) no description available & (chl4|511704 : 84.3) no description available & (loc_os01g53280.2 : 81.6) no description available & (at1g16740 : 78.6) Ribosomal protein L20; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L20 (InterPro:IPR005813); BEST Arabidopsis thaliana protein match is: ribosomal protein L20 (TAIR:ATCG00660.1); Has 8162 Blast hits to 8162 proteins in 2777 species: Archae - 0; Bacteria - 5193; Metazoa - 126; Fungi - 0; Plants - 621; Viruses - 0; Other Eukaryotes - 2222 (source: NCBI BLink). & (reliability: 327.58438) & (original description: 50S ribosomal protein L20, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl20 PE=3 SV=1)'" P '29.2.1.1.3.2.35' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L35' 'tr|b7fst1|b7fst1_phatc' "'(gnl|cdd|81663 : 82.1) no description available & (at4g23620 : 38.1) Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; FUNCTIONS IN: cobalt ion binding, zinc ion binding; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G66860.1). & (reliability: 76.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32845 PE=4 SV=1)'" P '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'tr|b7fxm9|b7fxm9_phatc' "'(gnl|cdd|81519 : 149.0) no description available & (gnl|cdd|36837 : 119.0) no description available & (loc_os11g37510.1 : 108.0) no description available & (at2g20060 : 98.6) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: ribosomal protein L4 (TAIR:AT1G07320.4); Has 8236 Blast hits to 8236 proteins in 2694 species: Archae - 70; Bacteria - 5573; Metazoa - 121; Fungi - 129; Plants - 100; Viruses - 0; Other Eukaryotes - 2243 (source: NCBI BLink). & (ipr002136 : 89.6185) Ribosomal protein L4/L1e & (o80361|rk4_tobac : 69.7) 50S ribosomal protein L4, chloroplast precursor (CL4) (R-protein L4) - Nicotiana tabacum (Common tobacco) & (chl4|512402 : 66.6) no description available & (reliability: 197.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12238 PE=4 SV=1)'" P '29.2.1.1.3.2.4' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L4' 'sp|a0t0h9|rk4_phatc' "'(gnl|cdd|79358 : 250.0) no description available & (gnl|cdd|36837 : 128.0) no description available & (ipr002136 : 117.24952) Ribosomal protein L4/L1e & (o49937|rk4_spiol : 116.0) 50S ribosomal protein L4, chloroplast precursor (R-protein L4) - Spinacia oleracea (Spinach) & (chl4|512402 : 116.0) no description available & (loc_os03g15870.1 : 114.0) no description available & (at1g07320 : 95.1) encodes a plastid ribosomal protein L4; ribosomal protein L4 (RPL4); FUNCTIONS IN: structural constituent of ribosome, poly(U) RNA binding; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4 (InterPro:IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro:IPR013005), Ribosomal protein L4/L1e (InterPro:IPR002136); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT2G20060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 173.4) & (original description: 50S ribosomal protein L4, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl4 PE=3 SV=1)'" P '29.2.1.1.3.2.510' 'protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.50S subunit.L10A' 'tr|b7g216|b7g216_phatc' "'(gnl|cdd|36783 : 258.0) no description available & (at5g22440 : 234.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (loc_os08g44450.2 : 234.0) no description available & (chl4|519012 : 216.0) no description available & (q9sw75|rl10a_chlre : 203.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|30430 : 142.0) no description available & (ipr002143 : 99.4892) Ribosomal protein L1 & (reliability: 466.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28359 PE=4 SV=1)'" P '29.2.1.2.1.11' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11' 'tr|b7g2u6|b7g2u6_phatc' "'(gnl|cdd|36939 : 192.0) no description available & (p17093|rs11_soybn : 169.0) 40S ribosomal protein S11 - Glycine max (Soybean) & (chl4|513156 : 168.0) no description available & (at4g30800 : 167.0) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S17, archaeal (InterPro:IPR019978), Ribosomal protein S17, conserved site (InterPro:IPR019979), Ribosomal protein S17 (InterPro:IPR000266); BEST Arabidopsis thaliana protein match is: ribosomal protein S11-beta (TAIR:AT5G23740.1); Has 1377 Blast hits to 1375 proteins in 498 species: Archae - 239; Bacteria - 304; Metazoa - 305; Fungi - 147; Plants - 148; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink). & (loc_os08g10608.1 : 160.0) no description available & (gnl|cdd|82687 : 112.0) no description available & (ipr012340 : 78.71867) Nucleic acid-binding, OB-fold & (reliability: 334.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28562 PE=3 SV=1)'" P '29.2.1.2.1.12' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S12' 'tr|b7fpa1|b7fpa1_phatc' "'(loc_os07g12650.3 : 106.0) no description available & (gnl|cdd|38616 : 106.0) no description available & (q9xhs0|rs12_horvu : 104.0) 40S ribosomal protein S12 - Hordeum vulgare (Barley) & (at1g15930 : 102.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cadmium ion, response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e (InterPro:IPR000530), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT2G32060.2); Has 1044 Blast hits to 1044 proteins in 336 species: Archae - 248; Bacteria - 0; Metazoa - 315; Fungi - 181; Plants - 131; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (gnl|cdd|85334 : 72.5) no description available & (ipr004038 : 44.25994) Ribosomal protein L7Ae/L30e/S12e/Gadd45 & (reliability: 204.0) & (original description: 40S ribosomal protein S12 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8686 PE=3 SV=1)'" P '29.2.1.2.1.13' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13' 'tr|b7fny4|b7fny4_phatc' "'(gnl|cdd|35621 : 237.0) no description available & (p62302|rs13_soybn : 233.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (at4g00100 : 223.0) Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (loc_os08g02410.1 : 215.0) no description available & (chl4|524602 : 214.0) no description available & (gnl|cdd|82677 : 170.0) no description available & (ipr012606 : 58.298595) Ribosomal protein S13/S15, N-terminal & (reliability: 446.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9199 PE=3 SV=1)'" P '29.2.1.2.1.14' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S14' 'tr|b7fxk9|b7fxk9_phatc' "'(gnl|cdd|35628 : 219.0) no description available & (p19950|rs141_maize : 207.0) 40S ribosomal protein S14 (Clone MCH1) - Zea mays (Maize) & (loc_os02g06700.2 : 207.0) no description available & (at2g36160 : 206.0) Ribosomal protein S11 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S11 (InterPro:IPR001971), Ribosomal S11, conserved site (InterPro:IPR018102); BEST Arabidopsis thaliana protein match is: Ribosomal protein S11 family protein (TAIR:AT3G11510.1); Has 8774 Blast hits to 8774 proteins in 2901 species: Archae - 250; Bacteria - 4863; Metazoa - 587; Fungi - 162; Plants - 736; Viruses - 0; Other Eukaryotes - 2176 (source: NCBI BLink). & (chl4|512415 : 201.0) no description available & (gnl|cdd|83108 : 183.0) no description available & (ipr001971 : 111.36806) Ribosomal protein S11 & (reliability: 412.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50886 PE=3 SV=1)'" P '29.2.1.2.1.15' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15' 'tr|b7fx18|b7fx18_phatc' "'(gnl|cdd|36116 : 210.0) no description available & (p31674|rs15_orysa : 184.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (loc_os07g08660.1 : 184.0) no description available & (at5g09500 : 179.0) Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09490.1); Has 7968 Blast hits to 7968 proteins in 3010 species: Archae - 256; Bacteria - 3995; Metazoa - 281; Fungi - 217; Plants - 1424; Viruses - 0; Other Eukaryotes - 1795 (source: NCBI BLink). & (chl4|525240 : 149.0) no description available & (gnl|cdd|81270 : 131.0) no description available & (ipr002222 : 73.944084) Ribosomal protein S19/S15 & (reliability: 358.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rps19 PE=3 SV=1)'" P '29.2.1.2.1.16' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S16' 'tr|b7fpk3|b7fpk3_phatc' "'(gnl|cdd|36964 : 206.0) no description available & (chl4|514396 : 170.0) no description available & (at5g18380 : 167.0) Ribosomal protein S5 domain 2-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S9 (InterPro:IPR000754), Ribosomal protein S9, conserved site (InterPro:IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT2G09990.1). & (p46293|rs16_goshi : 167.0) 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton) & (loc_os12g03090.1 : 166.0) no description available & (gnl|cdd|80683 : 145.0) no description available & (ipr014721 : 95.60996) Ribosomal protein S5 domain 2-type fold, subgroup & (reliability: 334.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17519 PE=3 SV=1)'" P '29.2.1.2.1.17' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S17' 'tr|b7fvn4|b7fvn4_phatc' "'(gnl|cdd|35408 : 176.0) no description available & (gnl|cdd|85056 : 158.0) no description available & (loc_os10g27190.1 : 141.0) no description available & (chl4|512805 : 140.0) no description available & (at2g05220 : 139.0) Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT5G04800.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr001210 : 118.37345) Ribosomal protein S17e & (reliability: 485.15353) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19314 PE=3 SV=1)'" P '29.2.1.2.1.18' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S18' 'tr|b7gb86|b7gb86_phatc' "'(at4g09800 : 193.0) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex; S18 ribosomal protein (RPS18C); FUNCTIONS IN: structural constituent of ribosome, RNA binding, nucleic acid binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit, nucleolus, cell wall, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13-like, H2TH (InterPro:IPR010979), Ribosomal protein S13, conserved site (InterPro:IPR018269), Ribosomal protein S13 (InterPro:IPR001892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S18 family (TAIR:AT1G22780.1); Has 7974 Blast hits to 7971 proteins in 2923 species: Archae - 237; Bacteria - 5081; Metazoa - 352; Fungi - 177; Plants - 401; Viruses - 0; Other Eukaryotes - 1726 (source: NCBI BLink). & (loc_os07g07709.1 : 191.0) no description available & (p49202|rs18_chlre : 189.0) 40S ribosomal protein S18 - Chlamydomonas reinhardtii & (chl4|523321 : 189.0) no description available & (gnl|cdd|38521 : 166.0) no description available & (gnl|cdd|81278 : 145.0) no description available & (ipr001892 : 70.68699) Ribosomal protein S13 & (reliability: 386.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30486 PE=3 SV=1)'" P '29.2.1.2.1.19' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S19' 'tr|b7g3g6|b7g3g6_phatc' "'(gnl|cdd|85236 : 167.0) no description available & (gnl|cdd|38621 : 163.0) no description available & (at3g02080 : 149.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1131 Blast hits to 1131 proteins in 394 species: Archae - 214; Bacteria - 4; Metazoa - 402; Fungi - 148; Plants - 164; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (loc_os03g31134.1 : 140.0) no description available & (p40978|rs19_orysa : 135.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (chl4|519124 : 135.0) no description available & (ipr001266 : 109.56857) Ribosomal protein S19e & (reliability: 489.745) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51066 PE=4 SV=1)'" P '29.2.1.2.1.2' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2' 'tr|b7g715|b7g715_phatc' "'(at1g58380 : 305.0) XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink). & (chl4|511423 : 299.0) no description available & (gnl|cdd|36095 : 294.0) no description available & (loc_os03g59310.1 : 291.0) no description available & (gnl|cdd|81274 : 224.0) no description available & (q9st69|rr5_spiol : 70.1) 30S ribosomal protein S5, chloroplast precursor - Spinacia oleracea (Spinach) & (ipr014721 : 68.047935) Ribosomal protein S5 domain 2-type fold, subgroup & (reliability: 610.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48411 PE=3 SV=1)'" P '29.2.1.2.1.20' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S20' 'tr|b7ged8|b7ged8_phatc' "'(chl4|516239 : 160.0) no description available & (p35686|rs20_orysa : 156.0) 40S ribosomal protein S20 - Oryza sativa (Rice) & (loc_os06g04290.1 : 156.0) no description available & (at5g62300 : 147.0) Ribosomal protein S10p/S20e family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, small ribosomal subunit; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S10, conserved site (InterPro:IPR018268), Ribosomal protein S10, eukaryotic/archaeal (InterPro:IPR005729), Ribosomal protein S10 (InterPro:IPR001848); BEST Arabidopsis thaliana protein match is: Ribosomal protein S10p/S20e family protein (TAIR:AT3G45030.1); Has 7487 Blast hits to 7487 proteins in 2603 species: Archae - 270; Bacteria - 4745; Metazoa - 380; Fungi - 144; Plants - 182; Viruses - 0; Other Eukaryotes - 1766 (source: NCBI BLink). & (gnl|cdd|36118 : 143.0) no description available & (gnl|cdd|64215 : 119.0) no description available & (ipr001848 : 78.73418) Ribosomal protein S10 & (reliability: 294.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51291 PE=3 SV=1)'" P '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'tr|b7gc20|b7gc20_phatc' "'(gnl|cdd|38696 : 94.3) no description available & (gnl|cdd|85335 : 93.9) no description available & (loc_os03g46490.1 : 90.5) no description available & (p35687|rs21_orysa : 88.6) 40S ribosomal protein S21 - Oryza sativa (Rice) & (at5g27700 : 84.3) Ribosomal protein S21e ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21e, conserved site (InterPro:IPR018279), Ribosomal protein S21e (InterPro:IPR001931); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21e (TAIR:AT3G53890.2); Has 660 Blast hits to 660 proteins in 258 species: Archae - 0; Bacteria - 0; Metazoa - 293; Fungi - 137; Plants - 120; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). & (chl4|521571 : 77.4) no description available & (ipr001931 : 64.06692) Ribosomal protein S21e & (reliability: 168.6) & (original description: 40S ribosomal protein S21 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30670 PE=3 SV=1)'" P '29.2.1.2.1.21' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S21' 'tr|b7fqc3|b7fqc3_phatc' "'(at3g27160 : 38.5) GHS1 encodes plastid ribosomal protein S21; GLUCOSE HYPERSENSITIVE 1 (GHS1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S21 (InterPro:IPR001911); BEST Arabidopsis thaliana protein match is: Ribosomal protein S21 family protein (TAIR:AT5G63300.1); Has 1937 Blast hits to 1937 proteins in 824 species: Archae - 0; Bacteria - 1717; Metazoa - 0; Fungi - 4; Plants - 72; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (gnl|cdd|64997 : 36.8) no description available & (loc_os02g09590.1 : 35.0) no description available & (reliability: 74.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8802 PE=3 SV=1)'" P '29.2.1.2.1.23' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S23' 'tr|b7frr3|b7frr3_phatc' "'(gnl|cdd|36960 : 224.0) no description available & (loc_os03g60400.1 : 200.0) no description available & (chl4|512935 : 197.0) no description available & (p46297|rs23_fraan : 196.0) 40S ribosomal protein S23 (S12) - Fragaria ananassa (Strawberry) & (gnl|cdd|48340 : 196.0) no description available & (at5g02960 : 194.0) Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). & (ipr006032 : 83.455185) Ribosomal protein S12/S23 & (reliability: 388.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50701 PE=3 SV=1)'" P '29.2.1.2.1.24' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S24' 'tr|b7g2b5|b7g2b5_phatc' "'(gnl|cdd|38634 : 133.0) no description available & (chl4|510367 : 112.0) no description available & (at5g28060 : 109.0) Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT3G04920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g52490.1 : 104.0) no description available & (gnl|cdd|32187 : 96.1) no description available & (ipr012677 : 88.637665) Nucleotide-binding, alpha-beta plait & (reliability: 334.39706) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21323 PE=3 SV=1)'" P '29.2.1.2.1.26' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26' 'tr|b7g9t0|b7g9t0_phatc' "'(gnl|cdd|85360 : 125.0) no description available & (gnl|cdd|36979 : 117.0) no description available & (at2g40590 : 103.0) Ribosomal protein S26e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892); BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1); Has 766 Blast hits to 766 proteins in 273 species: Archae - 53; Bacteria - 0; Metazoa - 312; Fungi - 152; Plants - 120; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (ipr000892 : 99.05198) Ribosomal protein S26e & (chl4|516709 : 75.5) no description available & (loc_os05g39960.3 : 75.1) no description available & (p49216|rs26_orysa : 71.2) 40S ribosomal protein S26 (S31) - Oryza sativa (Rice) & (reliability: 379.34094) & (original description: 40S ribosomal protein S26 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30160 PE=3 SV=1)'" P '29.2.1.2.1.27' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S27' 'tr|b7s416|b7s416_phatc' "'(at3g61110 : 120.0) Arabidopsis ribosomal protein; ribosomal protein S27 (RS27A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT2G45710.1); Has 1035 Blast hits to 1035 proteins in 379 species: Archae - 136; Bacteria - 0; Metazoa - 447; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (gnl|cdd|36990 : 120.0) no description available & (chl4|513463 : 114.0) no description available & (q96564|rs27_horvu : 109.0) 40S ribosomal protein S27 (Manganese efficiency-related protein 1) - Hordeum vulgare (Barley) & (loc_os02g27769.1 : 109.0) no description available & (gnl|cdd|65462 : 81.1) no description available & (ipr000592 : 53.875748) Ribosomal protein S27e & (reliability: 334.28256) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd477 PE=3 SV=1)'" P '29.2.1.2.1.28' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S28' 'tr|b7gcw6|b7gcw6_phatc' "'(gnl|cdd|38712 : 80.8) no description available & (gnl|cdd|85301 : 78.5) no description available & (ipr012340 : 73.944084) Nucleic acid-binding, OB-fold & (loc_os10g27174.1 : 54.7) no description available & (at5g03850 : 53.5) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46302|rs28_maize : 53.5) 40S ribosomal protein S28 - Zea mays (Maize) & (reliability: 219.36754) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23748 PE=3 SV=1)'" P '29.2.1.2.1.29' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S29' 'tr|b5y3h6|b5y3h6_phatc' "'(gnl|cdd|38716 : 60.7) no description available & (loc_os11g41610.1 : 51.6) no description available & (at4g33865 : 50.4) Ribosomal protein S14p/S29e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S14 (InterPro:IPR001209); BEST Arabidopsis thaliana protein match is: Ribosomal protein S14p/S29e family protein (TAIR:AT3G43980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|81734 : 47.1) no description available & (reliability: 100.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_28147 PE=4 SV=1)'" P '29.2.1.2.1.3' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3' 'tr|b7fti0|b7fti0_phatc' "'(gnl|cdd|38391 : 336.0) no description available & (loc_os07g41750.1 : 298.0) no description available & (at3g53870 : 289.0) Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, membrane; EXPRESSED IN: root, leaf; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 5912 Blast hits to 5911 proteins in 2101 species: Archae - 256; Bacteria - 3650; Metazoa - 372; Fungi - 151; Plants - 167; Viruses - 0; Other Eukaryotes - 1316 (source: NCBI BLink). & (chl4|519030 : 288.0) no description available & (gnl|cdd|30441 : 157.0) no description available & (ipr001351 : 47.398777) Ribosomal protein S3, C-terminal & (q9bbp8|rr3_lotja : 43.1) Chloroplast 30S ribosomal protein S3 - Lotus japonicus & (reliability: 578.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_33660 PE=4 SV=1)'" P '29.2.1.2.1.30' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S30' 'tr|b7fuk5|b7fuk5_phatc' "'(ipr006846 : 56.97684) Ribosomal protein S30 & (gnl|cdd|68335 : 52.4) no description available & (gnl|cdd|35233 : 52.0) no description available & (loc_os06g07580.2 : 49.3) no description available & (at5g56670 : 48.9) Ribosomal protein S30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30 (InterPro:IPR006846); BEST Arabidopsis thaliana protein match is: Ribosomal protein S30 family protein (TAIR:AT4G29390.1); Has 682 Blast hits to 682 proteins in 246 species: Archae - 2; Bacteria - 0; Metazoa - 304; Fungi - 135; Plants - 106; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 97.8) & (original description: 40S ribosomal protein S30 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10769 PE=3 SV=1)'" P '29.2.1.2.1.31' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.SA' 'tr|b7g2b6|b7g2b6_phatc' "'(o80377|rssa_dauca : 304.0) 40S ribosomal protein SA (p40) - Daucus carota (Carrot) & (at1g72370 : 296.0) acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.; 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os07g42450.1 : 293.0) no description available & (chl4|509880 : 284.0) no description available & (gnl|cdd|36048 : 256.0) no description available & (gnl|cdd|84690 : 230.0) no description available & (ipr001865 : 43.749115) Ribosomal protein S2 & (reliability: 592.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13682 PE=3 SV=1)'" P '29.2.1.2.1.4' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S4' 'tr|b7fny3|b7fny3_phatc' "'(gnl|cdd|35599 : 334.0) no description available & (chl4|524062 : 328.0) no description available & (loc_os05g30530.1 : 307.0) no description available & (p46300|rs4_soltu : 306.0) 40S ribosomal protein S4 - Solanum tuberosum (Potato) & (at5g58420 : 301.0) Ribosomal protein S4 (RPS4A) family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4e, central (InterPro:IPR013845), Ribosomal protein S4e, N-terminal, conserved site (InterPro:IPR018199), KOW (InterPro:IPR005824), RNA-binding S4 (InterPro:IPR002942), Ribosomal protein S4e, N-terminal (InterPro:IPR013843), Ribosomal protein S4e (InterPro:IPR000876); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (RPS4A) family protein (TAIR:AT5G07090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|31660 : 271.0) no description available & (ipr013845 : 57.382305) Ribosomal protein S4e, central & (reliability: 602.0) & (original description: 40S ribosomal protein S4 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17324 PE=3 SV=1)'" P '29.2.1.2.1.5' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S5' 'tr|b7g544|b7g544_phatc' "'(chl4|523702 : 283.0) no description available & (o65731|rs5_cicar : 275.0) 40S ribosomal protein S5 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (loc_os11g29190.2 : 272.0) no description available & (at2g37270 : 270.0) One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.; ribosomal protein 5B (RPS5B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 7 components; EXPRESSED IN: fruit, cultured cell, pollen tube, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7, conserved site (InterPro:IPR020606), Ribosomal protein S7, eukaryotic/archaeal (InterPro:IPR005716), Ribosomal protein S7 (InterPro:IPR000235); BEST Arabidopsis thaliana protein match is: ribosomal protein 5A (TAIR:AT3G11940.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38501 : 243.0) no description available & (gnl|cdd|81264 : 227.0) no description available & (ipr000235 : 181.31644) Ribosomal protein S5/S7 & (reliability: 540.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29097 PE=3 SV=1)'" P '29.2.1.2.1.515' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S15A' 'tr|b7gcp9|b7gcp9_phatc' '(gnl|cdd|36965 : 207.0) no description available & (loc_os07g10720.2 : 205.0) no description available & (at2g39590 : 202.0) Ribosomal protein S8 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 4287 Blast hits to 4287 proteins in 1592 species: Archae - 277; Bacteria - 2368; Metazoa - 435; Fungi - 223; Plants - 268; Viruses - 0; Other Eukaryotes - 716 (source: NCBI BLink). & (q9at34|rs15a_dauca : 202.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (gnl|cdd|81268 : 164.0) no description available & (ipr000630 : 52.37167) Ribosomal protein S8 & (reliability: 404.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23691 PE=3 SV=1)' P '29.2.1.2.1.53' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S3A' 'tr|b7fpm3|b7fpm3_phatc' "'(chl4|514298 : 269.0) no description available & (p49397|rs3a_orysj : 264.0) 40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2 & (loc_os03g10340.1 : 264.0) no description available & (at4g34670 : 263.0) Ribosomal protein S3Ae; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S3Ae, conserved site (InterPro:IPR018281), Ribosomal protein S3Ae (InterPro:IPR001593); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3Ae (TAIR:AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species: Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (gnl|cdd|85186 : 244.0) no description available & (gnl|cdd|36841 : 242.0) no description available & (ipr001593 : 154.81793) Ribosomal protein S3Ae & (reliability: 796.9314) & (original description: 40S ribosomal protein S3a OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17545 PE=3 SV=1)'" P '29.2.1.2.1.6' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S6' 'tr|b5y4x4|b5y4x4_phatc' "'(gnl|cdd|36859 : 253.0) no description available & (q9m3v8|rs6_aspof : 239.0) 40S ribosomal protein S6 - Asparagus officinalis (Garden asparagus) & (loc_os03g27260.1 : 233.0) no description available & (at5g10360 : 232.0) RPS6A and RPS6B are fully redundant and essential during gametogenesis.; embryo defective 3010 (EMB3010); CONTAINS InterPro DOMAIN/s: Ribosomal protein S6e (InterPro:IPR001377), Ribosomal protein S6e, conserved site (InterPro:IPR018282); BEST Arabidopsis thaliana protein match is: ribosomal protein S6 (TAIR:AT4G31700.1). & (chl4|526098 : 209.0) no description available & (gnl|cdd|64928 : 166.0) no description available & (ipr001377 : 112.13352) Ribosomal protein S6e & (reliability: 660.23364) & (original description: 40S ribosomal protein S6 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18559 PE=3 SV=1)'" P '29.2.1.2.1.7' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S7' 'tr|b7gdn5|b7gdn5_phatc' "'(gnl|cdd|38530 : 217.0) no description available & (gnl|cdd|85337 : 206.0) no description available & (chl4|512819 : 198.0) no description available & (loc_os03g18580.1 : 176.0) no description available & (q8lju5|rs7_orysa : 175.0) 40S ribosomal protein S7 - Oryza sativa (Rice) & (at3g02560 : 170.0) Ribosomal protein S7e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S7e (InterPro:IPR000554); BEST Arabidopsis thaliana protein match is: Ribosomal protein S7e family protein (TAIR:AT5G16130.1); Has 785 Blast hits to 785 proteins in 311 species: Archae - 0; Bacteria - 0; Metazoa - 354; Fungi - 147; Plants - 160; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). & (ipr000554 : 166.83595) Ribosomal protein S7e & (reliability: 631.9629) & (original description: 40S ribosomal protein S7 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31073 PE=3 SV=1)'" P '29.2.1.2.1.8' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S8' 'tr|b7fp80|b7fp80_phatc' "'(gnl|cdd|38493 : 252.0) no description available & (chl4|523318 : 206.0) no description available & (at5g59240 : 205.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (q08069|rs8_maize : 204.0) 40S ribosomal protein S8 - Zea mays (Maize) & (loc_os02g28810.2 : 204.0) no description available & (gnl|cdd|85302 : 140.0) no description available & (ipr022309 : 106.8865) Ribosomal protein S8e/ribosomal biogenesis NSA2 & (reliability: 410.0) & (original description: 40S ribosomal protein S8 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17414 PE=3 SV=1)'" P '29.2.1.2.1.9' 'protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9' 'tr|b7fxj2|b7fxj2_phatc' "'(loc_os11g38959.1 : 213.0) no description available & (chl4|525216 : 210.0) no description available & (at5g39850 : 205.0) Ribosomal protein S4; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S4 (InterPro:IPR001912), Ribosomal protein S4, conserved site (InterPro:IPR018079), Ribosomal protein S4/S9, eukaryotic/archaeal (InterPro:IPR005710), RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Ribosomal protein S4 (TAIR:AT5G15200.1); Has 6814 Blast hits to 6810 proteins in 3349 species: Archae - 264; Bacteria - 730; Metazoa - 422; Fungi - 285; Plants - 4172; Viruses - 0; Other Eukaryotes - 941 (source: NCBI BLink). & (gnl|cdd|38511 : 199.0) no description available & (gnl|cdd|81277 : 145.0) no description available & (p49214|rs9_tobac : 84.3) 40S ribosomal protein S9 (S4) (Fragment) - Nicotiana tabacum (Common tobacco) & (ipr001912 : 44.05022) Ribosomal protein S4/S9, N-terminal & (reliability: 410.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_6847 PE=3 SV=1)'" P '29.2.1.2.2.10' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10' 'tr|b7g7f1|b7g7f1_phatc' "'(p45635|rl101_orysa : 265.0) 60S ribosomal protein L10-1 (Putative tumor suppressor SC34) (Protein QM) - Oryza sativa (Rice) & (loc_os11g11390.1 : 265.0) no description available & (at1g66580 : 257.0) senescence associated gene 24 (SAG24); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1679 Blast hits to 1677 proteins in 605 species: Archae - 325; Bacteria - 13; Metazoa - 562; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). & (chl4|525837 : 252.0) no description available & (gnl|cdd|36075 : 229.0) no description available & (gnl|cdd|81322 : 173.0) no description available & (ipr016180 : 62.631832) Ribosomal protein L10e/L16 & (reliability: 514.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48699 PE=4 SV=1)'" P '29.2.1.2.2.11' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L11' 'tr|b7gb09|b7gb09_phatc' "'(gnl|cdd|35618 : 282.0) no description available & (p46287|rl11_medsa : 259.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (at2g42740 : 258.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (loc_os02g14059.1 : 256.0) no description available & (chl4|511164 : 234.0) no description available & (gnl|cdd|81331 : 201.0) no description available & (ipr022803 : 161.8543) Ribosomal protein L5 domain & (reliability: 514.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23324 PE=3 SV=1)'" P '29.2.1.2.2.12' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L12' 'tr|b7g4k6|b7g4k6_phatc' "'(gnl|cdd|36104 : 211.0) no description available & (loc_os04g50990.1 : 192.0) no description available & (at2g37190 : 189.0) Ribosomal protein L11 family protein; FUNCTIONS IN: structural constituent of ribosome, zinc ion binding; INVOLVED IN: response to cold, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11, conserved site (InterPro:IPR020785), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: Ribosomal protein L11 family protein (TAIR:AT3G53430.1); Has 1580 Blast hits to 1580 proteins in 592 species: Archae - 303; Bacteria - 410; Metazoa - 359; Fungi - 167; Plants - 131; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (chl4|513449 : 184.0) no description available & (p50884|rl12_chlre : 181.0) 60S ribosomal protein L12 (Fragment) - Chlamydomonas reinhardtii & (gnl|cdd|47926 : 120.0) no description available & (ipr020784 : 77.03513) Ribosomal protein L11, N-terminal & (reliability: 378.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28979 PE=3 SV=1)'" P '29.2.1.2.2.13' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13' 'tr|b7g9g2|b7g9g2_phatc' "'(gnl|cdd|38505 : 123.0) no description available & (gnl|cdd|65117 : 120.0) no description available & (loc_os06g02510.3 : 92.8) no description available & (ipr001380 : 92.197716) Ribosomal protein L13e & (at3g49010 : 91.7) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).; breast basic conserved 1 (BBC1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13e (InterPro:IPR001380); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13e family protein (TAIR:AT5G23900.1); Has 742 Blast hits to 736 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 295; Fungi - 161; Plants - 147; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (p49627|rl13_tobac : 84.3) 60S ribosomal protein L13 (Clone 6.2.1) - Nicotiana tabacum (Common tobacco) & (chl4|515596 : 75.5) no description available & (reliability: 183.4) & (original description: 60S ribosomal protein L13 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15619 PE=3 SV=1)'" P '29.2.1.2.2.14' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L14' 'tr|b5y4g9|b5y4g9_phatc' "'(gnl|cdd|38631 : 140.0) no description available & (loc_os04g43540.1 : 131.0) no description available & (p55844|rl14_pea : 127.0) Probable 60 ribosomal protein L14 (Hydroxyproline-rich glycoprotein HRGP1) - Pisum sativum (Garden pea) & (at4g27090 : 122.0) Ribosomal protein L14; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14 (InterPro:IPR002784); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14 (TAIR:AT2G20450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|517109 : 114.0) no description available & (gnl|cdd|65700 : 88.4) no description available & (ipr014722 : 62.35613) Translation protein SH3-like, subgroup & (reliability: 350.8172) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25577 PE=4 SV=1)'" P '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'tr|b7g1y6|b7g1y6_phatc' "'(gnl|cdd|36688 : 384.0) no description available & (chl4|519717 : 375.0) no description available & (at5g02870 : 345.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT3G09630.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os03g58204.1 : 316.0) no description available & (gnl|cdd|81272 : 235.0) no description available & (ipr002136 : 85.79349) Ribosomal protein L4/L1e & (reliability: 690.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51018 PE=4 SV=1)'" P '29.2.1.2.2.141' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L4/L1' 'tr|b7s3i7|b7s3i7_phatc' "'(gnl|cdd|36688 : 385.0) no description available & (chl4|519717 : 367.0) no description available & (at5g02870 : 349.0) Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT3G09630.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os07g08330.1 : 308.0) no description available & (gnl|cdd|81272 : 236.0) no description available & (ipr002136 : 86.30431) Ribosomal protein L4/L1e & (reliability: 698.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd977 PE=4 SV=1)'" P '29.2.1.2.2.15' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L15' 'tr|b5y502|b5y502_phatc' "'(gnl|cdd|36891 : 257.0) no description available & (gnl|cdd|64679 : 217.0) no description available & (ipr000439 : 207.13734) Ribosomal protein L15e & (chl4|518783 : 206.0) no description available & (at4g16720 : 196.0) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G17390.1); Has 1382 Blast hits to 1381 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 409; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink). & (o82528|rl15_pethy : 196.0) 60S ribosomal protein L15 - Petunia hybrida (Petunia) & (loc_os05g19370.1 : 193.0) no description available & (reliability: 754.49036) & (original description: Ribosomal protein L15 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25714 PE=3 SV=1)'" P '29.2.1.2.2.16' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L16' 'tr|b7gb09|b7gb09_phatc' "'(gnl|cdd|35618 : 282.0) no description available & (p46287|rl11_medsa : 259.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (at2g42740 : 258.0) encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.; ribosomal protein large subunit 16A (RPL16A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2); Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312; Bacteria - 5129; Metazoa - 255; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (loc_os02g14059.1 : 256.0) no description available & (chl4|511164 : 234.0) no description available & (gnl|cdd|81331 : 201.0) no description available & (ipr022803 : 161.8543) Ribosomal protein L5 domain & (reliability: 516.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23324 PE=3 SV=1)'" P '29.2.1.2.2.17' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L17' 'tr|b7g5i7|b7g5i7_phatc' "'(at1g27400 : 168.0) Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink). & (chl4|514303 : 167.0) no description available & (p35266|rl171_horvu : 157.0) 60S ribosomal protein L17-1 - Hordeum vulgare (Barley) & (gnl|cdd|38563 : 154.0) no description available & (loc_os08g41810.1 : 152.0) no description available & (ipr001063 : 125.76671) Ribosomal protein L22/L17 & (gnl|cdd|81333 : 118.0) no description available & (reliability: 336.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29177 PE=3 SV=1)'" P '29.2.1.2.2.18' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18' 'tr|b7gag0|b7gag0_phatc' "'(loc_os05g06310.1 : 206.0) no description available & (at3g05590 : 204.0) Encodes cytoplasmic ribosomal protein L18.; ribosomal protein L18 (RPL18); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole, large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 786 Blast hits to 785 proteins in 305 species: Archae - 30; Bacteria - 0; Metazoa - 334; Fungi - 154; Plants - 130; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (chl4|513111 : 202.0) no description available & (o65729|rl18_cicar : 198.0) 60S ribosomal protein L18 (Fragment) - Cicer arietinum (Chickpea) (Garbanzo) & (gnl|cdd|85054 : 195.0) no description available & (gnl|cdd|36926 : 195.0) no description available & (reliability: 408.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30315 PE=4 SV=1)'" P '29.2.1.2.2.19' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L19' 'tr|b7gaa5|b7gaa5_phatc' "'(gnl|cdd|29599 : 190.0) no description available & (gnl|cdd|36909 : 172.0) no description available & (at3g16780 : 144.0) Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT4G02230.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 171; Plants - 158; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (loc_os03g21940.1 : 144.0) no description available & (chl4|518452 : 139.0) no description available & (ipr000196 : 131.60402) Ribosomal protein L19/L19e & (q08066|rl19_maize : 82.4) 60S ribosomal protein L19 (Fragment) - Zea mays (Maize) & (reliability: 288.0) & (original description: Ribosomal protein L19 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30262 PE=3 SV=1)'" P '29.2.1.2.2.21' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L21' 'tr|b5y3l9|b5y3l9_phatc' "'(at1g57860 : 159.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (loc_os03g04750.1 : 155.0) no description available & (chl4|514858 : 139.0) no description available & (gnl|cdd|36943 : 134.0) no description available & (gnl|cdd|64990 : 112.0) no description available & (ipr001147 : 75.34345) Ribosomal protein L21e & (reliability: 449.85104) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46735 PE=4 SV=1)'" P '29.2.1.2.2.22' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L22' 'tr|b7g9c7|b7g9c7_phatc' "'(gnl|cdd|85669 : 121.0) no description available & (gnl|cdd|38644 : 120.0) no description available & (at3g05560 : 92.0) Ribosomal L22e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22e (InterPro:IPR002671); BEST Arabidopsis thaliana protein match is: Ribosomal L22e protein family (TAIR:AT5G27770.1); Has 686 Blast hits to 686 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 136; Plants - 114; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). & (loc_os03g22340.1 : 88.2) no description available & (ipr002671 : 83.19417) Ribosomal protein L22e & (chl4|525143 : 82.8) no description available & (reliability: 329.58978) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39687 PE=4 SV=1)'" P '29.2.1.2.2.23' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23' 'tr|b7gdh3|b7gdh3_phatc' "'(at3g04400 : 182.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 180.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (loc_os10g32920.1 : 180.0) no description available & (chl4|521882 : 177.0) no description available & (gnl|cdd|36119 : 151.0) no description available & (gnl|cdd|82686 : 146.0) no description available & (ipr000218 : 97.4636) Ribosomal protein L14b/L23e & (reliability: 364.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl14 PE=3 SV=1)'" P '29.2.1.2.2.24' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L24' 'tr|b7fup5|b7fup5_phatc' "'(gnl|cdd|36933 : 81.7) no description available & (loc_os05g40820.2 : 80.1) no description available & (p50888|rl24_horvu : 75.9) 60S ribosomal protein L24 - Hordeum vulgare (Barley) & (at2g36620 : 74.3) RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).; ribosomal protein L24 (RPL24A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L24e (InterPro:IPR000988); BEST Arabidopsis thaliana protein match is: Ribosomal protein L24e family protein (TAIR:AT3G53020.1); Has 1480 Blast hits to 1465 proteins in 352 species: Archae - 106; Bacteria - 37; Metazoa - 463; Fungi - 306; Plants - 338; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink). & (chl4|519552 : 74.3) no description available & (gnl|cdd|85333 : 56.9) no description available & (ipr000988 : 39.306465) Ribosomal protein L24e-related & (reliability: 148.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19152 PE=4 SV=1)'" P '29.2.1.2.2.26' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L26' 'tr|b7fth9|b7fth9_phatc' "'(at5g67510 : 126.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT3G49910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|511439 : 119.0) no description available & (loc_os12g05430.1 : 118.0) no description available & (gnl|cdd|38611 : 118.0) no description available & (q39411|rl26_brara : 114.0) 60S ribosomal protein L26 - Brassica rapa (Turnip) & (ipr014723 : 85.10034) Ribosomal protein L24, SH3-like & (gnl|cdd|80834 : 84.9) no description available & (reliability: 252.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11032 PE=4 SV=1)'" P '29.2.1.2.2.27' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27' 'tr|b7fqq4|b7fqq4_phatc' "'(gnl|cdd|38628 : 104.0) no description available & (chl4|517118 : 97.4) no description available & (at2g32220 : 93.2) Ribosomal L27e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, intracellular, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L27e, conserved site (InterPro:IPR018262), Ribosomal protein L27e (InterPro:IPR001141); BEST Arabidopsis thaliana protein match is: Ribosomal L27e protein family (TAIR:AT3G22230.1); Has 767 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 0; Metazoa - 342; Fungi - 149; Plants - 139; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (q05462|rl27_pea : 91.7) 60S ribosomal protein L27 - Pisum sativum (Garden pea) & (loc_os10g41470.1 : 89.7) no description available & (gnl|cdd|85670 : 55.8) no description available & (ipr001141 : 44.227154) Ribosomal protein L27e & (reliability: 263.79752) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17846 PE=4 SV=1)'" P '29.2.1.2.2.28' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L28' 'tr|b5y501|b5y501_phatc' "'(at4g29410 : 79.3) Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (loc_os02g57540.1 : 77.0) no description available & (gnl|cdd|38622 : 76.6) no description available & (gnl|cdd|85671 : 70.9) no description available & (ipr002672 : 47.222885) Ribosomal protein L28e & (chl4|518149 : 46.2) no description available & (reliability: 241.24005) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18585 PE=4 SV=1)'" P '29.2.1.2.2.3' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L3' 'tr|b5y405|b5y405_phatc' "'(gnl|cdd|35965 : 496.0) no description available & (p35684|rl3_orysj : 446.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (loc_os12g07010.1 : 446.0) no description available & (at1g61580 : 445.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (chl4|509568 : 438.0) no description available & (gnl|cdd|81334 : 287.0) no description available & (ipr000597 : 238.88106) Ribosomal protein L3 & (reliability: 890.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_13361 PE=3 SV=1)'" P '29.2.1.2.2.30' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L30' 'tr|b5y4i0|b5y4i0_phatc' "'(chl4|509631 : 130.0) no description available & (at1g77940 : 128.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L30e (InterPro:IPR000231); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G36240.1); Has 1074 Blast hits to 1073 proteins in 382 species: Archae - 212; Bacteria - 1; Metazoa - 396; Fungi - 147; Plants - 146; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). & (o48558|rl30_maize : 125.0) 60S ribosomal protein L30 - Zea mays (Maize) & (gnl|cdd|38199 : 125.0) no description available & (loc_os01g16890.1 : 124.0) no description available & (gnl|cdd|32095 : 112.0) no description available & (ipr004038 : 45.95639) Ribosomal protein L7Ae/L30e/S12e/Gadd45 & (reliability: 256.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43840 PE=4 SV=1)'" P '29.2.1.2.2.31' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L31' 'tr|b7fy06|b7fy06_phatc' "'(gnl|cdd|36111 : 108.0) no description available & (p45841|rl31_chlre : 107.0) 60S ribosomal protein L31 - Chlamydomonas reinhardtii & (gnl|cdd|85299 : 107.0) no description available & (chl4|512610 : 107.0) no description available & (at5g56710 : 103.0) Ribosomal protein L31e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31e (InterPro:IPR000054); BEST Arabidopsis thaliana protein match is: Ribosomal protein L31e family protein (TAIR:AT4G26230.1); Has 842 Blast hits to 842 proteins in 260 species: Archae - 2; Bacteria - 0; Metazoa - 430; Fungi - 129; Plants - 169; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (loc_os08g39500.1 : 94.0) no description available & (ipr000054 : 92.73828) Ribosomal protein L31e & (reliability: 368.292) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27125 PE=4 SV=1)'" P '29.2.1.2.2.32' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32' 'tr|b7g3g9|b7g3g9_phatc' "'(gnl|cdd|36096 : 148.0) no description available & (loc_os09g32500.2 : 138.0) no description available & (at4g18100 : 131.0) Ribosomal protein L32e; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus; EXPRESSED IN: callus, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263); BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|85596 : 131.0) no description available & (chl4|523676 : 131.0) no description available & (ipr001515 : 98.67469) Ribosomal protein L32e & (p51421|rl32_maize : 40.0) 60S ribosomal protein L32 (Fragment) - Zea mays (Maize) & (reliability: 262.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21659 PE=4 SV=1)'" P '29.2.1.2.2.34' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34' 'tr|b7ftl4|b7ftl4_phatc' "'(gnl|cdd|37001 : 90.0) no description available & (gnl|cdd|85300 : 77.3) no description available & (at3g28900 : 75.5) Ribosomal protein L34e superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L34e, conserved site (InterPro:IPR018065), Ribosomal protein L34e (InterPro:IPR008195); BEST Arabidopsis thaliana protein match is: ribosomal protein L34 (TAIR:AT1G69620.1); Has 932 Blast hits to 932 proteins in 308 species: Archae - 48; Bacteria - 0; Metazoa - 298; Fungi - 143; Plants - 198; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). & (p40590|rl34_pea : 72.4) 60S ribosomal protein L34 - Pisum sativum (Garden pea) & (chl4|516257 : 70.5) no description available & (loc_os09g24690.1 : 68.9) no description available & (ipr008195 : 57.56463) Ribosomal protein L34e & (reliability: 251.7381) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44291 PE=4 SV=1)'" P '29.2.1.2.2.35' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35' 'tr|b7fwj5|b7fwj5_phatc' "'(gnl|cdd|38646 : 78.6) no description available & (loc_os04g30730.1 : 71.6) no description available & (chl4|515335 : 69.7) no description available & (at5g02610 : 68.2) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1). & (q8l805|rl35_wheat : 64.7) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (ipr001854 : 46.74485) Ribosomal protein L29 & (gnl|cdd|72765 : 40.9) no description available & (reliability: 136.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19615 PE=3 SV=1)'" P '29.2.1.2.2.36' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36' 'tr|b7ftl3|b7ftl3_phatc' "'(loc_os05g38520.3 : 75.1) no description available & (gnl|cdd|38662 : 74.6) no description available & (at2g37600 : 72.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 756 Blast hits to 755 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 140; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (gnl|cdd|64991 : 72.0) no description available & (chl4|512498 : 65.9) no description available & (p52866|rl36_dauca : 64.3) 60S ribosomal protein L36 - Daucus carota (Carrot) & (ipr000509 : 58.53221) Ribosomal protein L36e & (reliability: 246.43137) & (original description: 60S ribosomal protein L36 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18859 PE=3 SV=1)'" P '29.2.1.2.2.38' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L38' 'tr|b7fvy3|b7fvy3_phatc' "'(gnl|cdd|38709 : 82.4) no description available & (gnl|cdd|65567 : 78.5) no description available & (chl4|520259 : 77.8) no description available & (loc_os11g24610.1 : 74.7) no description available & (at3g59540 : 72.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (ipr002675 : 65.781715) Ribosomal protein L38e & (reliability: 259.118) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19413 PE=3 SV=1)'" P '29.2.1.2.2.39' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L39' 'tr|b7gb32|b7gb32_phatc' "'(ipr000077 : 53.11028) Ribosomal protein L39e & (at4g31985 : 50.4) Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT3G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51426|rl39_orysa : 50.4) 60S ribosomal protein L39 - Oryza sativa (Rice) & (loc_os06g08320.1 : 50.4) no description available & (gnl|cdd|35226 : 42.7) no description available & (gnl|cdd|64683 : 37.6) no description available & (reliability: 100.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16125 PE=4 SV=1)'" P '29.2.1.2.2.44' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L44' 'tr|b7fv96|b7fv96_phatc' "'(gnl|cdd|38674 : 93.9) no description available & (ipr000552 : 84.72565) Ribosomal protein L44e & (loc_os07g33860.1 : 80.1) no description available & (at4g14320 : 78.6) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|31818 : 77.3) no description available & (q96499|rl44_goshi : 72.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (chl4|524113 : 72.0) no description available & (reliability: 148.26988) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8185 PE=4 SV=1)'" P '29.2.1.2.2.5' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L5' 'tr|b7fpq0|b7fpq0_phatc' "'(gnl|cdd|36093 : 287.0) no description available & (o65353|rl5_helan : 270.0) 60S ribosomal protein L5 - Helianthus annuus (Common sunflower) & (loc_os01g67126.1 : 261.0) no description available & (at3g25520 : 255.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (chl4|515414 : 227.0) no description available & (gnl|cdd|82684 : 145.0) no description available & (ipr005484 : 80.99096) Ribosomal protein L18/L5 & (reliability: 510.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31919 PE=3 SV=1)'" P '29.2.1.2.2.510' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L10A' 'tr|b7g216|b7g216_phatc' "'(gnl|cdd|36783 : 258.0) no description available & (at5g22440 : 234.0) Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1); Has 4875 Blast hits to 4874 proteins in 1649 species: Archae - 280; Bacteria - 2611; Metazoa - 459; Fungi - 187; Plants - 522; Viruses - 0; Other Eukaryotes - 816 (source: NCBI BLink). & (loc_os08g44450.2 : 234.0) no description available & (chl4|519012 : 216.0) no description available & (q9sw75|rl10a_chlre : 203.0) 60S ribosomal protein L10a - Chlamydomonas reinhardtii & (gnl|cdd|30430 : 142.0) no description available & (ipr002143 : 99.4892) Ribosomal protein L1 & (reliability: 468.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28359 PE=4 SV=1)'" P '29.2.1.2.2.513' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L13A' 'tr|b7fss8|b7fss8_phatc' "'(chl4|513529 : 195.0) no description available & (loc_os03g54890.1 : 189.0) no description available & (at3g07110 : 187.0) Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|38414 : 183.0) no description available & (o49885|rl13a_luplu : 177.0) 60S ribosomal protein L13a - Lupinus luteus (European yellow lupin) & (ipr005822 : 112.184814) Ribosomal protein L13 & (gnl|cdd|84874 : 104.0) no description available & (reliability: 374.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25375 PE=3 SV=1)'" P '29.2.1.2.2.518' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A' 'tr|b7g0r5|b7g0r5_phatc' '(gnl|cdd|36047 : 200.0) no description available & (gnl|cdd|65561 : 195.0) no description available & (chl4|511606 : 162.0) no description available & (at1g29970 : 160.0) 60S ribosomal protein L18A-1; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 80 Blast hits to 80 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q943f3|rl18a_orysa : 152.0) 60S ribosomal protein L18a - Oryza sativa (Rice) & (loc_os01g54870.1 : 152.0) no description available & (ipr021138 : 110.8388) Ribosomal protein L18a & (reliability: 320.0) & (original description: 60S ribosomal protein L18a OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36226 PE=3 SV=1)' P '29.2.1.2.2.527' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A' 'tr|b7fqu7|b7fqu7_phatc' "'(at1g23290 : 172.0) Encodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20.; RPL27AB; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L15, conserved site (InterPro:IPR001196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT1G70600.1); Has 1087 Blast hits to 1087 proteins in 423 species: Archae - 174; Bacteria - 23; Metazoa - 355; Fungi - 166; Plants - 138; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). & (chl4|519308 : 170.0) no description available & (gnl|cdd|36953 : 168.0) no description available & (loc_os07g42170.1 : 159.0) no description available & (gnl|cdd|81945 : 89.1) no description available & (ipr021131 : 68.16126) Ribosomal protein L18e/L15P & (reliability: 344.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43162 PE=3 SV=1)'" P '29.2.1.2.2.535' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L35A' 'tr|b7gcp8|b7gcp8_phatc' "'(gnl|cdd|36105 : 111.0) no description available & (loc_os05g48310.2 : 104.0) no description available & (chl4|510432 : 102.0) no description available & (at1g41880 : 100.0) Ribosomal protein L35Ae family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L35Ae (InterPro:IPR001780), Ribosomal protein L35Ae, conserved site (InterPro:IPR018266); BEST Arabidopsis thaliana protein match is: Ribosomal protein L35Ae family protein (TAIR:AT3G55750.1); Has 766 Blast hits to 766 proteins in 257 species: Archae - 25; Bacteria - 0; Metazoa - 323; Fungi - 146; Plants - 149; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (gnl|cdd|65072 : 97.7) no description available & (ipr001780 : 66.97342) Ribosomal protein L35Ae & (reliability: 317.2035) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23687 PE=4 SV=1)'" P '29.2.1.2.2.536' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36A' 'tr|b7fv96|b7fv96_phatc' "'(gnl|cdd|38674 : 93.9) no description available & (ipr000552 : 84.72565) Ribosomal protein L44e & (loc_os07g33860.1 : 80.1) no description available & (at4g14320 : 78.6) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (gnl|cdd|31818 : 77.3) no description available & (q96499|rl44_goshi : 72.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (chl4|524113 : 72.0) no description available & (reliability: 157.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8185 PE=4 SV=1)'" P '29.2.1.2.2.537' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L37A' 'tr|b7g4z0|b7g4z0_phatc' "'(gnl|cdd|35623 : 112.0) no description available & (chl4|522971 : 108.0) no description available & (gnl|cdd|85673 : 107.0) no description available & (at3g60245 : 105.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae (InterPro:IPR002674), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G10950.1); Has 1052 Blast hits to 1052 proteins in 365 species: Archae - 290; Bacteria - 0; Metazoa - 325; Fungi - 120; Plants - 130; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (q5qm99|rl37a_orysa : 103.0) 60S ribosomal protein L37a - Oryza sativa (Rice) & (loc_os05g48320.1 : 103.0) no description available & (ipr011331 : 81.66929) Ribosomal protein L37ae/L37e, N-terminal & (reliability: 347.7848) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47804 PE=3 SV=1)'" P '29.2.1.2.2.57' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7A' 'tr|b7ga10|b7ga10_phatc' "'(at2g47610 : 213.0) Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L7A/L8 (InterPro:IPR001921), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro:IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal protein L7Ae conserved site (InterPro:IPR004037); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT3G62870.1); Has 2106 Blast hits to 2104 proteins in 415 species: Archae - 332; Bacteria - 1; Metazoa - 722; Fungi - 352; Plants - 299; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (p35685|rl7a_orysa : 212.0) 60S ribosomal protein L7a - Oryza sativa (Rice) & (loc_os09g32976.1 : 212.0) no description available & (chl4|513469 : 203.0) no description available & (gnl|cdd|38376 : 166.0) no description available & (gnl|cdd|31549 : 71.9) no description available & (ipr004038 : 38.55616) Ribosomal protein L7Ae/L30e/S12e/Gadd45 & (reliability: 426.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23079 PE=4 SV=1)'" P '29.2.1.2.2.6' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6' 'tr|b7fuv3|b7fuv3_phatc' "'(p34091|rl6_mescr : 153.0) 60S ribosomal protein L6 (YL16-like) - Mesembryanthemum crystallinum (Common ice plant) & (loc_os04g39700.1 : 153.0) no description available & (at1g74060 : 151.0) Ribosomal protein L6 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6, N-terminal (InterPro:IPR005568), Ribosomal protein L6E (InterPro:IPR000915); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family protein (TAIR:AT1G74050.1); Has 744 Blast hits to 744 proteins in 281 species: Archae - 16; Bacteria - 0; Metazoa - 333; Fungi - 149; Plants - 117; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (chl4|510831 : 135.0) no description available & (gnl|cdd|85278 : 120.0) no description available & (gnl|cdd|36907 : 86.2) no description available & (ipr000915 : 78.56233) Ribosomal protein L6E & (reliability: 439.48407) & (original description: 60S ribosomal protein L6 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34146 PE=3 SV=1)'" P '29.2.1.2.2.7' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7' 'tr|b7g8j0|b7g8j0_phatc' "'(at2g01250 : 234.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (loc_os08g13690.1 : 233.0) no description available & (gnl|cdd|29435 : 223.0) no description available & (gnl|cdd|38394 : 222.0) no description available & (chl4|513643 : 208.0) no description available & (ipr016082 : 67.10347) Ribosomal protein L30, ferredoxin-like fold domain & (reliability: 468.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22774 PE=4 SV=1)'" P '29.2.1.2.2.8' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L8' 'tr|b5y3u9|b5y3u9_phatc' "'(gnl|cdd|37520 : 331.0) no description available & (p25998|rl8_tobac : 295.0) 60S ribosomal protein L8 (60S ribosomal protein L2) - Nicotiana tabacum (Common tobacco) & (at4g36130 : 291.0) Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein L2 (InterPro:IPR002171), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, domain 3 (InterPro:IPR014726), Ribosomal Proteins L2, RNA binding domain (InterPro:IPR022666), Ribosomal protein L2, conserved site (InterPro:IPR022671); BEST Arabidopsis thaliana protein match is: Ribosomal protein L2 family (TAIR:AT2G18020.1); Has 10610 Blast hits to 10603 proteins in 3612 species: Archae - 317; Bacteria - 5622; Metazoa - 462; Fungi - 292; Plants - 1215; Viruses - 0; Other Eukaryotes - 2702 (source: NCBI BLink). & (loc_os12g38000.1 : 291.0) no description available & (chl4|513599 : 271.0) no description available & (gnl|cdd|83109 : 258.0) no description available & (ipr022669 : 78.43871) Ribosomal protein L2, C-terminal & (reliability: 582.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl2 PE=4 SV=1)'" P '29.2.1.2.2.80' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P0' 'tr|b7gbl1|b7gbl1_phatc' "'(gnl|cdd|36033 : 281.0) no description available & (p50346|rla0_soybn : 256.0) 60S acidic ribosomal protein P0 - Glycine max (Soybean) & (at3g09200 : 250.0) Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome, copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1417 Blast hits to 1416 proteins in 449 species: Archae - 322; Bacteria - 1; Metazoa - 456; Fungi - 192; Plants - 147; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). & (chl4|513276 : 244.0) no description available & (loc_os08g03640.1 : 239.0) no description available & (gnl|cdd|81260 : 168.0) no description available & (ipr001790 : 46.49799) Ribosomal protein L10/acidic P0 & (reliability: 500.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30660 PE=4 SV=1)'" P '29.2.1.2.2.82' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2' 'tr|b7g981|b7g981_phatc' "'(gnl|cdd|38659 : 59.5) no description available & (loc_os05g37330.1 : 54.7) no description available & (o24415|rla2b_maize : 48.1) 60S acidic ribosomal protein P2B - Zea mays (Maize) & (gnl|cdd|32241 : 47.6) no description available & (chl4|519902 : 45.8) no description available & (at3g44590 : 40.4) 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27710.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 80.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15632 PE=3 SV=1)'" P '29.2.1.2.2.9' 'protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L9' 'tr|b7fub2|b7fub2_phatc' "'(at4g10450 : 209.0) Ribosomal protein L6 family; FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L6 (InterPro:IPR000702), Ribosomal protein L6, alpha-beta domain (InterPro:IPR020040), Ribosomal protein L6, conserved site-2 (InterPro:IPR002359); BEST Arabidopsis thaliana protein match is: Ribosomal protein L6 family (TAIR:AT1G33140.1); Has 2629 Blast hits to 2626 proteins in 920 species: Archae - 312; Bacteria - 1081; Metazoa - 421; Fungi - 181; Plants - 347; Viruses - 0; Other Eukaryotes - 287 (source: NCBI BLink). & (chl4|512716 : 207.0) no description available & (p30707|rl9_pea : 202.0) 60S ribosomal protein L9 (Gibberellin-regulated protein GA) - Pisum sativum (Garden pea) & (loc_os09g31180.1 : 199.0) no description available & (gnl|cdd|38465 : 156.0) no description available & (gnl|cdd|81628 : 152.0) no description available & (ipr020040 : 90.82247) Ribosomal protein L6, alpha-beta domain & (reliability: 418.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19025 PE=4 SV=1)'" P '29.2.1.99.1.25' 'protein.synthesis.ribosomal protein.unknown.small subunit.S25' 'tr|b5y3p7|b5y3p7_phatc' '(gnl|cdd|86293 : 99.0) no description available & (gnl|cdd|36978 : 90.8) no description available & (ipr004977 : 84.27936) Ribosomal protein S25 & (loc_os09g39540.2 : 66.2) no description available & (at4g34555 : 64.3) Ribosomal protein S25 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977); BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|525698 : 64.3) no description available & (reliability: 147.48888) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21073 PE=4 SV=1)' P '29.2.1.99.2.19' 'protein.synthesis.ribosomal protein.unknown.large subunit.L19' 'sp|a0t0c7|rk19_phatc' "'(gnl|cdd|79301 : 148.0) no description available & (q9mun9|rk19_mesvi : 122.0) Chloroplast 50S ribosomal protein L19 - Mesostigma viride & (ipr001857 : 94.40599) Ribosomal protein L19 & (chl4|517818 : 87.0) no description available & (loc_os02g43600.1 : 72.0) no description available & (at4g11630 : 69.3) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). & (gnl|cdd|36911 : 66.1) no description available & (reliability: 165.21048) & (original description: 50S ribosomal protein L19, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl19 PE=3 SV=1)'" P '29.2.1.99.2.23' 'protein.synthesis.ribosomal protein.unknown.large subunit.L23' 'tr|b7fpj8|b7fpj8_phatc' "'(gnl|cdd|81720 : 55.1) no description available & (gnl|cdd|39292 : 53.1) no description available & (chl4|517665 : 46.6) no description available & (at4g39880 : 41.2) Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink). & (loc_os07g23244.1 : 36.2) no description available & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31866 PE=4 SV=1)'" P '29.2.1.99.2.39' 'protein.synthesis.ribosomal protein.unknown.large subunit.L39' 'tr|b7gb32|b7gb32_phatc' "'(ipr000077 : 53.11028) Ribosomal protein L39e & (at4g31985 : 50.4) Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT3G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51426|rl39_orysa : 50.4) 60S ribosomal protein L39 - Oryza sativa (Rice) & (loc_os06g08320.1 : 50.4) no description available & (gnl|cdd|35226 : 42.7) no description available & (gnl|cdd|64683 : 37.6) no description available & (reliability: 92.942986) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16125 PE=4 SV=1)'" P '29.2.2' 'protein.synthesis.ribosome biogenesis' 'tr|b7gdz2|b7gdz2_phatc' "'(chl4|522825 : 1134.0) no description available & (q9smh3|dyh1a_chlre : 1087.0) Dynein-1-alpha heavy chain, flagellar inner arm I1 complex (1-alpha DHC) (Dynein-1, subspecies f) - Chlamydomonas reinhardtii & (gnl|cdd|34842 : 936.0) no description available & (gnl|cdd|38801 : 907.0) no description available & (ipr013602 : 236.17302) Dynein heavy chain, domain-2 & (at1g67120 : 60.1) ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of protein complex assembly; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Midasin (InterPro:IPR012099), ATPase, AAA-5 (InterPro:IPR011704), ATPase, AAA+ type, core (InterPro:IPR003593), von Willebrand factor, type A (InterPro:IPR002035), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g46810.1 : 53.5) no description available & (reliability: 120.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DHC1 PE=4 SV=1)'" P '29.2.2' 'protein.synthesis.ribosome biogenesis' 'tr|b7fun1|b7fun1_phatc' "'(gnl|cdd|35836 : 284.0) no description available & (gnl|cdd|29142 : 236.0) no description available & (chl4|518479 : 232.0) no description available & (loc_os03g21620.1 : 190.0) no description available & (at3g08720 : 187.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 133.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (ipr017442 : 128.60829) no description available & (reliability: 374.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10865 PE=3 SV=1)'" P '29.2.2' 'protein.synthesis.ribosome biogenesis' 'tr|b7fq88|b7fq88_phatc' "'(gnl|cdd|35836 : 315.0) no description available & (chl4|518479 : 249.0) no description available & (gnl|cdd|29142 : 232.0) no description available & (loc_os03g21620.1 : 205.0) no description available & (at3g08720 : 202.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 130.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (ipr017442 : 128.35698) no description available & (reliability: 404.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9413 PE=3 SV=1)'" P '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'tr|b7fxr2|b7fxr2_phatc' "'(loc_os08g45010.1 : 618.0) no description available & (at5g60790 : 605.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36145 : 601.0) no description available & (chl4|520045 : 535.0) no description available & (gnl|cdd|30834 : 477.0) no description available & (q9tkx3|cysa_nepol : 59.3) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Nephroselmis olivacea & (reliability: 1210.0) & (original description: Frustulin 5 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Fru5_1 PE=4 SV=1)'" P '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'tr|b7gb66|b7gb66_phatc' "'(gnl|cdd|38128 : 198.0) no description available & (chl4|510964 : 173.0) no description available & (at1g43860 : 170.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (loc_os08g01620.2 : 158.0) no description available & (gnl|cdd|31689 : 143.0) no description available & (ipr019783 : 57.228153) Ribosome maturation protein SBDS, N-terminal & (reliability: 340.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16065 PE=4 SV=1)'" P '29.2.2.1' 'protein.synthesis.ribosome biogenesis.export from nucleus' 'tr|b7fny9|b7fny9_phatc' "'(gnl|cdd|36145 : 575.0) no description available & (at5g60790 : 556.0) member of GCN subfamily; GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1); FUNCTIONS IN: transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os08g45010.1 : 551.0) no description available & (chl4|520045 : 496.0) no description available & (gnl|cdd|30834 : 453.0) no description available & (q9tkx3|cysa_nepol : 59.3) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Nephroselmis olivacea & (reliability: 1112.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41659 PE=4 SV=1)'" P '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'tr|b5y4z7|b5y4z7_phatc' "'(gnl|cdd|37784 : 574.0) no description available & (chl4|513377 : 478.0) no description available & (at1g56110 : 477.0) NOP56-like protein; homolog of nucleolar protein NOP56 (NOP56); LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G12860.1); Has 24182 Blast hits to 12540 proteins in 912 species: Archae - 265; Bacteria - 1523; Metazoa - 8592; Fungi - 2628; Plants - 1300; Viruses - 179; Other Eukaryotes - 9695 (source: NCBI BLink). & (loc_os03g22880.1 : 465.0) no description available & (gnl|cdd|31687 : 309.0) no description available & (ipr002687 : 126.30571) Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain & (reliability: 938.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18579 PE=4 SV=1)'" P '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'tr|b7fw92|b7fw92_phatc' "'(gnl|cdd|37783 : 476.0) no description available & (loc_os03g22730.5 : 410.0) no description available & (at5g27120 : 403.0) SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein; NOP56-like pre RNA processing ribonucleoprotein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain (InterPro:IPR002687), NOP5, N-terminal (InterPro:IPR012974), NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: NOP56-like pre RNA processing ribonucleoprotein (TAIR:AT3G05060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|510054 : 397.0) no description available & (gnl|cdd|31687 : 316.0) no description available & (ipr002687 : 132.85678) Pre-mRNA processing ribonucleoprotein, snoRNA-binding domain & (reliability: 792.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19552 PE=4 SV=1)'" P '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'tr|b7g130|b7g130_phatc' "'(loc_os03g25450.1 : 586.0) no description available & (at3g57150 : 570.0) Encodes a putative pseudouridine synthase (NAP57).; homologue of NAP57 (NAP57); FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: cytosol, nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), H/ACA ribonucleoprotein complex, subunit Cbf5 (InterPro:IPR004802), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501), Dyskerin-like (InterPro:IPR012960), Uncharacterised domain 2 (InterPro:IPR004521); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G14460.1); Has 114172 Blast hits to 55339 proteins in 3754 species: Archae - 551; Bacteria - 17094; Metazoa - 41477; Fungi - 11530; Plants - 5704; Viruses - 752; Other Eukaryotes - 37064 (source: NCBI BLink). & (chl4|520921 : 560.0) no description available & (gnl|cdd|37740 : 455.0) no description available & (gnl|cdd|81343 : 337.0) no description available & (ipr012960 : 54.62019) Dyskerin-like & (q9smh4|raa2_chlre : 44.3) Trans-splicing factor Raa2, chloroplast precursor - Chlamydomonas reinhardtii & (reliability: 1140.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_20773 PE=4 SV=1)'" P '29.2.2.3.1' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs' 'tr|b7fph8|b7fph8_phatc' "'(gnl|cdd|38472 : 107.0) no description available & (gnl|cdd|68001 : 97.3) no description available & (chl4|514282 : 84.7) no description available & (at3g03920 : 78.6) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink). & (loc_os11g37080.1 : 77.8) no description available & (ipr007504 : 45.17623) H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 & (reliability: 157.2) & (original description: H/ACA ribonucleoprotein complex subunit (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_7349 PE=3 SV=1)'" P '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'tr|b5y531|b5y531_phatc' "'(gnl|cdd|35549 : 572.0) no description available & (at3g13920 : 562.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (q40465|if411_tobac : 560.0) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) - Nicotiana tabacum (Common tobacco) & (loc_os02g05330.1 : 556.0) no description available & (chl4|523861 : 553.0) no description available & (gnl|cdd|30859 : 382.0) no description available & (ipr011545 : 92.66552) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1038.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25743 PE=3 SV=1)'" P '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'tr|b7fr43|b7fr43_phatc' "'(gnl|cdd|30859 : 93.7) no description available & (gnl|cdd|35528 : 89.3) no description available & (at1g12770 : 57.4) Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (loc_os03g12000.1 : 53.9) no description available & (chl4|509775 : 50.1) no description available & (p41380|if4a3_nicpl : 38.1) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 107.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43245 PE=4 SV=1)'" P '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'tr|b7fz31|b7fz31_phatc' "'(gnl|cdd|30859 : 187.0) no description available & (gnl|cdd|35552 : 163.0) no description available & (loc_os09g21520.1 : 119.0) no description available & (at4g09730 : 110.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (chl4|520783 : 107.0) no description available & (p41380|if4a3_nicpl : 79.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 198.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45898 PE=4 SV=1)'" P '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'tr|b7g370|b7g370_phatc' "'(gnl|cdd|35553 : 375.0) no description available & (gnl|cdd|30859 : 292.0) no description available & (p41382|if410_tobac : 238.0) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 237.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (loc_os02g05330.1 : 236.0) no description available & (chl4|523861 : 229.0) no description available & (ipr011545 : 63.779236) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 446.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47384 PE=4 SV=1)'" P '29.2.2.3.5' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases' 'tr|b7g3a5|b7g3a5_phatc' "'(gnl|cdd|36167 : 177.0) no description available & (gnl|cdd|34219 : 72.3) no description available & (loc_os02g50560.1 : 57.4) no description available & (chl4|511167 : 55.8) no description available & (at1g70070 : 54.7) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (reliability: 101.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47412 PE=4 SV=1)'" P '29.2.2.3.99' 'protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc' 'tr|b7gb66|b7gb66_phatc' "'(gnl|cdd|38128 : 198.0) no description available & (chl4|510964 : 173.0) no description available & (at1g43860 : 170.0) sequence-specific DNA binding transcription factors; CONTAINS InterPro DOMAIN/s: Ribosome maturation protein SBDS, C-terminal (InterPro:IPR018978), Ribosome maturation protein SBDS (InterPro:IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro:IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro:IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species: Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink). & (loc_os08g01620.2 : 158.0) no description available & (gnl|cdd|31689 : 143.0) no description available & (ipr019783 : 57.228153) Ribosome maturation protein SBDS, N-terminal & (reliability: 340.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16065 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fzj3|b7fzj3_phatc' "'(loc_os03g21550.3 : 164.0) no description available & (o24473|if2b_wheat : 163.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (gnl|cdd|37979 : 163.0) no description available & (at5g20920 : 155.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (chl4|513509 : 150.0) no description available & (gnl|cdd|85734 : 123.0) no description available & (ipr002735 : 74.28056) Translation initiation factor IF2/IF5 & (reliability: 439.99097) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27282 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fp24|b7fp24_phatc' "'(gnl|cdd|38395 : 377.0) no description available & (chl4|514642 : 358.0) no description available & (at3g55620 : 338.0) embryo defective 1624 (emb1624); FUNCTIONS IN: ribosome binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF6 (InterPro:IPR002769); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF6 (TAIR:AT2G39820.1); Has 941 Blast hits to 941 proteins in 349 species: Archae - 255; Bacteria - 0; Metazoa - 235; Fungi - 146; Plants - 134; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (loc_os07g44620.2 : 338.0) no description available & (gnl|cdd|29623 : 299.0) no description available & (o81920|if6_betvu : 270.0) Eukaryotic translation initiation factor 6 (eIF-6) (Fragment) - Beta vulgaris (Sugar beet) & (ipr002769 : 178.8597) Translation initiation factor IF6 & (reliability: 989.00446) & (original description: Eukaryotic translation initiation factor 6 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=EIF6 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b5y531|b5y531_phatc' "'(gnl|cdd|35549 : 572.0) no description available & (at3g13920 : 562.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (q40465|if411_tobac : 560.0) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) - Nicotiana tabacum (Common tobacco) & (loc_os02g05330.1 : 556.0) no description available & (chl4|523861 : 553.0) no description available & (gnl|cdd|30859 : 382.0) no description available & (ipr011545 : 92.66552) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 1124.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_25743 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fu83|b7fu83_phatc' "'(gnl|cdd|81514 : 626.0) no description available & (gnl|cdd|36360 : 481.0) no description available & (at1g17220 : 372.0) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.; fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). & (p57997|if2c_phavu : 357.0) Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) - Phaseolus vulgaris (Kidney bean) (French bean) & (loc_os05g49970.2 : 348.0) no description available & (chl4|524809 : 328.0) no description available & (ipr000795 : 75.722946) Elongation factor, GTP-binding domain & (reliability: 744.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10835 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g170|b7g170_phatc' "'(ipr007783 : 1500.0) Eukaryotic translation initiation factor 3, subunit 7 & (gnl|cdd|68656 : 429.0) no description available & (gnl|cdd|37690 : 424.0) no description available & (loc_os05g49150.1 : 322.0) no description available & (at4g20980 : 319.0) Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 3, subunit 7 (InterPro:IPR007783); BEST Arabidopsis thaliana protein match is: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (TAIR:AT5G44320.1). & (chl4|522604 : 174.0) no description available & (reliability: 3263.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13088 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7gbr7|b7gbr7_phatc' "'(gnl|cdd|35344 : 126.0) no description available & (loc_os02g54700.1 : 106.0) no description available & (at3g11400 : 105.0) One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).; eukaryotic translation initiation factor 3G1 (EIF3G1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor 3, RNA-binding subunit (InterPro:IPR017334); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G2 (TAIR:AT5G06000.1); Has 305 Blast hits to 280 proteins in 134 species: Archae - 2; Bacteria - 2; Metazoa - 144; Fungi - 81; Plants - 54; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (chl4|523240 : 102.0) no description available & (gnl|cdd|47687 : 69.9) no description available & (ipr012677 : 51.05735) Nucleotide-binding, alpha-beta plait & (q08937|roc2_nicsy : 44.3) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco) & (reliability: 210.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16281 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fr46|b7fr46_phatc' "'(gnl|cdd|38481 : 155.0) no description available & (p80639|if5a_maize : 140.0) Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D) - Zea mays (Maize) & (loc_os12g32240.1 : 135.0) no description available & (at1g13950 : 132.0) Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.; eukaryotic elongation factor 5A-1 (ELF5A-1); FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity; INVOLVED IN: translational initiation, xylem development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, IF5A, hypusine site (InterPro:IPR019769), Translation protein SH3-like, subgroup (InterPro:IPR014722), Translation elongation factor, IF5A (InterPro:IPR001884), Translation elongation factor, IF5A C-terminal (InterPro:IPR020189), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1); Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264; Bacteria - 0; Metazoa - 366; Fungi - 246; Plants - 261; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (chl4|518927 : 121.0) no description available & (gnl|cdd|81251 : 86.0) no description available & (ipr014722 : 71.795654) Translation protein SH3-like, subgroup & (reliability: 264.0) & (original description: Eukaryotic translation initiation factor 5A OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17954 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g3t4|b7g3t4_phatc' "'(gnl|cdd|37969 : 355.0) no description available & (loc_os07g12110.1 : 305.0) no description available & (chl4|512802 : 295.0) no description available & (at3g57290 : 293.0) Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.; eukaryotic translation initiation factor 3E (EIF3E); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: flower development, response to salt stress, translation, photomorphogenesis, transcription initiation; LOCATED IN: signalosome, eukaryotic translation initiation factor 3 complex, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor 3, subunit 6, eukaryotic (InterPro:IPR016650), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to 638 proteins in 243 species: Archae - 0; Bacteria - 2; Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (gnl|cdd|87985 : 114.0) no description available & (ipr019010 : 60.4834) Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal & (reliability: 586.0) & (original description: Eukaryotic translation initiation factor 3 subunit E OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21485 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fxh3|b7fxh3_phatc' "'(gnl|cdd|37525 : 487.0) no description available & (at5g25780 : 397.0) member of eIF3b - eukaryotic initiation factor 3b; eukaryotic translation initiation factor 3B-2 (EIF3B-2); FUNCTIONS IN: protein binding, nucleic acid binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: cultured cell, seed; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Translation initiation factor eIF-3b (InterPro:IPR011400), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os10g41960.1 : 394.0) no description available & (p56821|if39_tobac : 375.0) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (chl4|521285 : 375.0) no description available & (gnl|cdd|34929 : 228.0) no description available & (ipr013979 : 90.29511) Translation initiation factor 2A, beta propellor-like domain & (reliability: 794.0) & (original description: Eukaryotic translation initiation factor 3 subunit B OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26975 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fu51|b7fu51_phatc' "'(gnl|cdd|38462 : 68.8) no description available & (q94hf1|if3c_orysa : 58.5) Eukaryotic translation initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k) - Oryza sativa (Rice) & (loc_os03g08450.1 : 58.5) no description available & (at4g33250 : 48.5) Encodes initiation factor 3k (EIF3k).; eukaryotic translation initiation factor 3K (EIF3K); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Translation initiation factor 3, subunit 12, N-terminal, eukaryotic (InterPro:IPR016020), Translation initiation factor 3, subunit 12, eukaryotic (InterPro:IPR009374), Armadillo-type fold (InterPro:IPR016024), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 423 Blast hits to 423 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 100; Plants - 89; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (chl4|513180 : 45.4) no description available & (gnl|cdd|86784 : 43.5) no description available & (reliability: 97.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_33885 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fv44|b7fv44_phatc' "'(gnl|cdd|38127 : 392.0) no description available & (at2g40290 : 290.0) Eukaryotic translation initiation factor 2 subunit 1; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Eukaryotic translation initiation factor 2, alpha subunit (InterPro:IPR011488); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 alpha subunit (TAIR:AT5G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os03g18510.1 : 280.0) no description available & (chl4|512633 : 271.0) no description available & (gnl|cdd|31290 : 242.0) no description available & (ipr012340 : 82.79775) Nucleic acid-binding, OB-fold & (reliability: 580.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34538 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g8w6|b7g8w6_phatc' "'(gnl|cdd|35862 : 347.0) no description available & (chl4|521378 : 281.0) no description available & (loc_os08g21660.1 : 274.0) no description available & (at2g46290 : 263.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TGF-beta receptor interacting protein 1 (TAIR:AT2G46280.2); Has 51915 Blast hits to 23729 proteins in 705 species: Archae - 52; Bacteria - 7544; Metazoa - 20576; Fungi - 11592; Plants - 5771; Viruses - 0; Other Eukaryotes - 6380 (source: NCBI BLink). & (gnl|cdd|29257 : 138.0) no description available & (ipr015943 : 115.514915) WD40/YVTN repeat-like-containing domain & (p93107|pf20_chlre : 60.1) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 526.0) & (original description: Eukaryotic translation initiation factor 3 subunit I OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39526 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7gb16|b7gb16_phatc' "'(gnl|cdd|35687 : 692.0) no description available & (chl4|518948 : 591.0) no description available & (loc_os12g07740.1 : 578.0) no description available & (at1g04170 : 569.0) protein synthesis initiation factor eIF2 gamma; eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink). & (gnl|cdd|34854 : 543.0) no description available & (q9tjq8|eftu_prowi : 94.0) Elongation factor Tu (EF-Tu) - Prototheca wickerhamii & (ipr015256 : 80.49517) Translation initiation factor 2, gamma subunit, C-terminal & (reliability: 1138.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42307 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g0t8|b7g0t8_phatc' "'(gnl|cdd|37283 : 507.0) no description available & (at4g11420 : 335.0) Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.; eukaryotic translation initiation factor 3A (EIF3A); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23330.1); Has 151795 Blast hits to 76455 proteins in 3156 species: Archae - 1231; Bacteria - 22686; Metazoa - 70860; Fungi - 11049; Plants - 6472; Viruses - 438; Other Eukaryotes - 39059 (source: NCBI BLink). & (q9xhr2|if3a_maize : 318.0) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) - Zea mays (Maize) & (chl4|514202 : 316.0) no description available & (loc_os01g03070.1 : 312.0) no description available & (gnl|cdd|84229 : 79.6) no description available & (reliability: 670.0) & (original description: Eukaryotic translation initiation factor 3 subunit A OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46320 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g370|b7g370_phatc' "'(gnl|cdd|35553 : 375.0) no description available & (gnl|cdd|30859 : 292.0) no description available & (p41382|if410_tobac : 238.0) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 237.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (loc_os02g05330.1 : 236.0) no description available & (chl4|523861 : 229.0) no description available & (ipr011545 : 63.779236) DNA/RNA helicase, DEAD/DEAH box type, N-terminal & (reliability: 474.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47384 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g5g1|b7g5g1_phatc' "'(ipr016021 : 124.740074) MIF4-like, type 1/2/3 & (loc_os07g36940.2 : 101.0) no description available & (q03387|if41_wheat : 90.9) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) - Triticum aestivum (Wheat) & (gnl|cdd|35622 : 89.8) no description available & (at3g60240 : 87.0) protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.; eukaryotic translation initiation factor 4G (EIF4G); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: response to virus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 9538 Blast hits to 7052 proteins in 555 species: Archae - 16; Bacteria - 1070; Metazoa - 4140; Fungi - 1856; Plants - 683; Viruses - 80; Other Eukaryotes - 1693 (source: NCBI BLink). & (chl4|517011 : 78.2) no description available & (gnl|cdd|86149 : 74.2) no description available & (reliability: 174.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47943 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g6p3|b7g6p3_phatc' "'(gnl|cdd|37526 : 234.0) no description available & (gnl|cdd|72087 : 181.0) no description available & (loc_os02g39350.1 : 165.0) no description available & (chl4|525559 : 164.0) no description available & (at1g73180 : 151.0) Eukaryotic translation initiation factor eIF2A family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Eukaryotic translation initiation factor 2A, central region (InterPro:IPR013979), Translation initiation factor eIF-2A (InterPro:IPR011387), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); BEST Arabidopsis thaliana protein match is: translation initiation factor 3B1 (TAIR:AT5G27640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr013979 : 96.01543) Translation initiation factor 2A, beta propellor-like domain & (p56821|if39_tobac : 49.7) Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p110) (eIF3b) - Nicotiana tabacum (Common tobacco) & (reliability: 302.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48306 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g862|b7g862_phatc' "'(gnl|cdd|37450 : 153.0) no description available & (loc_os01g71230.1 : 114.0) no description available & (at3g12390 : 107.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (chl4|515712 : 104.0) no description available & (gnl|cdd|65629 : 66.5) no description available & (ipr002715 : 42.916206) Nascent polypeptide-associated complex NAC & (reliability: 198.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48728 PE=4 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7g7v4|b7g7v4_phatc' "'(gnl|cdd|36292 : 561.0) no description available & (gnl|cdd|69019 : 407.0) no description available & (q9xhm1|if38_medtr : 399.0) Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110) (eIF3c) - Medicago truncatula (Barrel medic) & (at3g56150 : 389.0) member of eIF3c - eukaryotic initiation factor 3c; eukaryotic translation initiation factor 3C (EIF3C); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), Eukaryotic translation initiation factor 3 subunit 8, N-terminal (InterPro:IPR008905); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3 subunit C2 (TAIR:AT3G22860.1). & (loc_os02g03080.1 : 384.0) no description available & (chl4|522005 : 315.0) no description available & (ipr008905 : 257.7072) Eukaryotic translation initiation factor 3 subunit 8, N-terminal & (reliability: 1228.9875) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_522 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fp79|b7fp79_phatc' "'(gnl|cdd|38613 : 157.0) no description available & (at5g35680 : 141.0) Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1). & (p47815|if1a_wheat : 134.0) Eukaryotic translation initiation factor 1A (EIF-1A) (EIF-4C) - Triticum aestivum (Wheat) & (loc_os06g23440.1 : 134.0) no description available & (ipr012340 : 127.31552) Nucleic acid-binding, OB-fold & (chl4|519056 : 127.0) no description available & (gnl|cdd|47929 : 111.0) no description available & (reliability: 282.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8976 PE=3 SV=1)'" P '29.2.3' 'protein.synthesis.initiation' 'tr|b7fta6|b7fta6_phatc' "'(gnl|cdd|36882 : 178.0) no description available & (gnl|cdd|85593 : 175.0) no description available & (at5g18110 : 170.0) novel cap-binding protein (NCBP); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) (InterPro:IPR001040), Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (InterPro:IPR019770); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E (TAIR:AT4G18040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g15590.1 : 164.0) no description available & (ipr001040 : 136.52586) Eukaryotic translation initiation factor 4E (eIF-4E) & (o81482|if4e2_maize : 95.9) Eukaryotic translation initiation factor 4E-2 (eIF4E-2) (eIF-4E-2) (mRNA cap-binding protein) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) - Zea mays (Maize) & (chl4|521497 : 87.4) no description available & (reliability: 578.9203) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9731 PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7gbl0|b7gbl0_phatc' "'(gnl|cdd|31410 : 612.0) no description available & (at2g31060 : 433.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). & (chl4|515080 : 430.0) no description available & (loc_os01g54910.1 : 424.0) no description available & (gnl|cdd|35683 : 338.0) no description available & (o23755|ef2_betvu : 105.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (ipr000795 : 99.6845) Elongation factor, GTP-binding domain & (reliability: 866.0) & (original description: L-serine ammonia-lyase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=L-SD PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fvu7|b7fvu7_phatc' "'(gnl|cdd|80442 : 1162.0) no description available & (chl4|518464 : 843.0) no description available & (p34811|efgc_soybn : 842.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (gnl|cdd|35686 : 830.0) no description available & (at1g62750 : 829.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (loc_os04g45490.1 : 690.0) no description available & (ipr000795 : 134.97705) Elongation factor, GTP-binding domain & (reliability: 1658.0) & (original description: Elongation factor G, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11189 PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7gbq5|b7gbq5_phatc' "'(gnl|cdd|31410 : 748.0) no description available & (loc_os02g18450.1 : 656.0) no description available & (at5g13650 : 630.0) elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT2G31060.2); Has 76334 Blast hits to 67578 proteins in 6162 species: Archae - 1271; Bacteria - 47471; Metazoa - 3896; Fungi - 2458; Plants - 1891; Viruses - 1; Other Eukaryotes - 19346 (source: NCBI BLink). & (chl4|524668 : 620.0) no description available & (gnl|cdd|35683 : 424.0) no description available & (ipr000795 : 110.88076) Elongation factor, GTP-binding domain & (o23755|ef2_betvu : 105.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 1260.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23444 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fud3|b7fud3_phatc' "'(at1g09640 : 235.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (q5z627|ef1g3_orysa : 234.0) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma 3) - Oryza sativa (Rice) & (loc_os06g37440.1 : 234.0) no description available & (gnl|cdd|48108 : 136.0) no description available & (gnl|cdd|36840 : 119.0) no description available & (ipr001662 : 100.00541) Translation elongation factor EF1B, gamma chain, conserved & (chl4|512124 : 43.1) no description available & (reliability: 645.00946) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26176 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fp40|b7fp40_phatc' "'(gnl|cdd|48108 : 44.1) no description available & (at1g09640 : 40.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G57720.2). & (q5z627|ef1g3_orysa : 38.9) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma 3) - Oryza sativa (Rice) & (loc_os06g37440.1 : 38.9) no description available & (gnl|cdd|36085 : 35.0) no description available & (reliability: 80.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31702 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fpa4|b7fpa4_phatc' "'(gnl|cdd|82964 : 214.0) no description available & (ipr014039 : 105.65655) Translation elongation factor EFTs/EF1B, dimerisation & (loc_os08g30884.1 : 94.0) no description available & (at4g11120 : 84.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (gnl|cdd|36289 : 80.1) no description available & (chl4|509935 : 67.0) no description available & (reliability: 168.0) & (original description: Elongation factor Ts, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31768 PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7frx3|b7frx3_phatc' "'(gnl|cdd|36881 : 86.9) no description available & (gnl|cdd|29372 : 58.6) no description available & (at1g30230 : 53.5) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (p29546|ef1b_wheat : 48.5) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Triticum aestivum (Wheat) & (loc_os07g46750.1 : 48.1) no description available & (ipr014717 : 43.566795) Translation elongation factor EF1B/ribosomal protein S6 & (reliability: 107.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32531 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fz72|b7fz72_phatc' "'(gnl|cdd|35690 : 1237.0) no description available & (loc_os02g32030.1 : 1041.0) no description available & (at1g56070 : 1026.0) encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1); FUNCTIONS IN: translation factor activity, nucleic acid binding, copper ion binding, translation elongation factor activity; INVOLVED IN: response to cold; LOCATED IN: cytosol, nucleolus, chloroplast, plasma membrane, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT3G12915.1); Has 64297 Blast hits to 57476 proteins in 4618 species: Archae - 1324; Bacteria - 41101; Metazoa - 3172; Fungi - 1934; Plants - 1269; Viruses - 1; Other Eukaryotes - 15496 (source: NCBI BLink). & (o23755|ef2_betvu : 1018.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (chl4|513191 : 1007.0) no description available & (gnl|cdd|82272 : 629.0) no description available & (ipr014721 : 161.18095) Ribosomal protein S5 domain 2-type fold, subgroup & (reliability: 2052.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35766 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7gef0|b7gef0_phatc' "'(gnl|cdd|80699 : 207.0) no description available & (chl4|516900 : 156.0) no description available & (at3g08740 : 149.0) elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor P (InterPro:IPR011768), Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722), Elongation factor P, C-terminal (InterPro:IPR015365), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor P/YeiP (InterPro:IPR020599); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT4G26310.1); Has 10499 Blast hits to 10498 proteins in 2700 species: Archae - 4; Bacteria - 7892; Metazoa - 1; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2521 (source: NCBI BLink). & (loc_os12g02380.1 : 139.0) no description available & (ipr012340 : 52.26631) Nucleic acid-binding, OB-fold & (reliability: 298.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41511 PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7fvt4|b7fvt4_phatc' "'(gnl|cdd|57969 : 384.0) no description available & (gnl|cdd|35686 : 367.0) no description available & (at1g45332 : 334.0) Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, translation elongation factor activity, ATP binding; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 85600 Blast hits to 73226 proteins in 9903 species: Archae - 926; Bacteria - 48433; Metazoa - 8034; Fungi - 6838; Plants - 1636; Viruses - 3; Other Eukaryotes - 19730 (source: NCBI BLink). & (q9fe64|efgm_orysa : 332.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (loc_os03g36780.1 : 332.0) no description available & (chl4|518464 : 197.0) no description available & (ipr000795 : 103.75559) Elongation factor, GTP-binding domain & (reliability: 668.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44833 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7g862|b7g862_phatc' "'(gnl|cdd|37450 : 153.0) no description available & (loc_os01g71230.1 : 114.0) no description available & (at3g12390 : 107.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (chl4|515712 : 104.0) no description available & (gnl|cdd|65629 : 66.5) no description available & (ipr002715 : 42.916206) Nascent polypeptide-associated complex NAC & (reliability: 214.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48728 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7g8h9|b7g8h9_phatc' "'(gnl|cdd|36881 : 124.0) no description available & (gnl|cdd|29372 : 68.7) no description available & (p29545|ef1b_orysa : 61.6) Elongation factor 1-beta (EF-1-beta) (Elongation factor 1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta') (EF-1-beta') - Oryza sativa (Rice) & (loc_os07g46750.1 : 61.6) no description available & (at1g30230 : 55.1) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (ipr014717 : 43.279114) Translation elongation factor EF1B/ribosomal protein S6 & (reliability: 110.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48822 PE=4 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'sp|q9tk50|efts_phatc' "'(gnl|cdd|84085 : 231.0) no description available & (at4g29060 : 191.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os12g35630.1 : 191.0) no description available & (chl4|513250 : 181.0) no description available & (gnl|cdd|36289 : 120.0) no description available & (ipr014039 : 69.99384) Translation elongation factor EFTs/EF1B, dimerisation & (reliability: 382.0) & (original description: Elongation factor Ts, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=tsf PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'sp|a0t0k6|eftu_phatc' "'(gnl|cdd|79288 : 763.0) no description available & (gnl|cdd|35681 : 601.0) no description available & (q9tkz5|eftu_nepol : 567.0) Elongation factor Tu (EF-Tu) - Nephroselmis olivacea & (at4g20360 : 540.0) RAB GTPase homolog E1B (RABE1b); FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 9 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT4G02930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g38210.1 : 523.0) no description available & (chl4|523017 : 432.0) no description available & (ipr000795 : 137.56732) Elongation factor, GTP-binding domain & (reliability: 1224.6038) & (original description: Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=tufA PE=3 SV=1)'" P '29.2.4' 'protein.synthesis.elongation' 'tr|b7ga11|b7ga11_phatc' "'(gnl|cdd|80474 : 709.0) no description available & (gnl|cdd|35681 : 635.0) no description available & (loc_os03g63410.1 : 545.0) no description available & (at4g02930 : 535.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (chl4|523017 : 503.0) no description available & (p68158|eftu_tobac : 468.0) Elongation factor Tu, chloroplast precursor (EF-Tu) - Nicotiana tabacum (Common tobacco) & (ipr000795 : 132.06833) Elongation factor, GTP-binding domain & (reliability: 1192.0988) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TufA PE=3 SV=1)'" P '29.2.5' 'protein.synthesis.release' 'tr|b7fu01|b7fu01_phatc' "'(gnl|cdd|35907 : 627.0) no description available & (loc_os01g71270.1 : 593.0) no description available & (chl4|514684 : 590.0) no description available & (at3g26618 : 584.0) eukaryotic release factor 1-3 (ERF1-3); FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Peptide chain release factor eRF1/aRF1 (InterPro:IPR004403); BEST Arabidopsis thaliana protein match is: eukaryotic release factor 1-2 (TAIR:AT1G12920.1); Has 1175 Blast hits to 1170 proteins in 381 species: Archae - 342; Bacteria - 2; Metazoa - 243; Fungi - 154; Plants - 143; Viruses - 3; Other Eukaryotes - 288 (source: NCBI BLink). & (gnl|cdd|31692 : 418.0) no description available & (ipr005141 : 92.197716) eRF1 domain 2 & (reliability: 1329.346) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50796 PE=4 SV=1)'" P '29.3' 'protein.targeting' 'tr|b7g4j1|b7g4j1_phatc' "'(q7xab8|thf1_soltu : 74.7) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (at2g20890 : 73.6) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membrane??delimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (loc_os07g37250.1 : 63.9) no description available & (ipr017499 : 57.813087) Photosystem II Psp29, biogenesis & (chl4|514173 : 54.3) no description available & (reliability: 147.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37959 PE=4 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7g3i0|b7g3i0_phatc' "'(gnl|cdd|37203 : 787.0) no description available & (at2g46520 : 608.0) cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (loc_os01g13430.1 : 484.0) no description available & (gnl|cdd|71934 : 403.0) no description available & (ipr005043 : 283.21796) CAS/CSE, C-terminal & (chl4|514165 : 69.3) no description available & (reliability: 1216.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21667 PE=4 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7g5i4|b7g5i4_phatc' "'(gnl|cdd|35388 : 616.0) no description available & (at3g06720 : 598.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (chl4|521968 : 592.0) no description available & (q9slx0|ima1b_orysa : 591.0) Importin alpha-1b subunit - Oryza sativa (Rice) & (loc_os05g06350.1 : 591.0) no description available & (gnl|cdd|34668 : 582.0) no description available & (ipr011989 : 271.4427) Armadillo-like helical & (reliability: 1196.0) & (original description: Importin subunit alpha OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29174 PE=3 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7gc72|b7gc72_phatc' "'(at4g27640 : 325.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink). & (gnl|cdd|37382 : 317.0) no description available & (ipr011989 : 193.01169) Armadillo-like helical & (chl4|512651 : 150.0) no description available & (loc_os03g49420.1 : 148.0) no description available & (gnl|cdd|34812 : 57.4) no description available & (reliability: 650.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23582 PE=4 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7geg3|b7geg3_phatc' "'(chl4|511896 : 1018.0) no description available & (at3g03110 : 1010.0) Encodes a member of the exportin family (XPO1B)which function as receptors for nuclear transport.Along with XPO1A involved in the development of male and female gametophytes.; exportin 1B (XPO1B); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: pollen germination, protein import into nucleus, docking, pollen tube growth, embryo sac development, pollen development; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1A (TAIR:AT5G17020.1); Has 1366 Blast hits to 1341 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 258; Plants - 127; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (loc_os03g64080.1 : 996.0) no description available & (gnl|cdd|34704 : 986.0) no description available & (gnl|cdd|37231 : 846.0) no description available & (ipr011989 : 284.68765) Armadillo-like helical & (reliability: 2020.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24186 PE=4 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7g8t5|b7g8t5_phatc' "'(gnl|cdd|36455 : 600.0) no description available & (loc_os12g38110.1 : 473.0) no description available & (at5g53480 : 455.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|34812 : 433.0) no description available & (chl4|511311 : 389.0) no description available & (ipr011989 : 268.7606) Armadillo-like helical & (reliability: 910.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29967 PE=4 SV=1)'" P '29.3.1' 'protein.targeting.nucleus' 'tr|b7fri1|b7fri1_phatc' '(gnl|cdd|37195 : 59.2) no description available & (gnl|cdd|75061 : 53.1) no description available & (loc_os04g04020.1 : 39.3) no description available & (at4g37130 : 37.0) hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink). & (reliability: 74.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42501 PE=4 SV=1)' P '29.3.1' 'protein.targeting.nucleus' 'tr|b7fxz1|b7fxz1_phatc' '(chl4|518732 : 44.3) no description available & (at5g41470 : 43.9) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT1G71480.1); Has 94 Blast hits to 92 proteins in 28 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (loc_os09g09320.1 : 42.0) no description available & (gnl|cdd|83532 : 36.5) no description available & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45522 PE=4 SV=1)' P '29.3.1' 'protein.targeting.nucleus' 'tr|b7g1i2|b7g1i2_phatc' "'(gnl|cdd|35339 : 115.0) no description available & (gnl|cdd|29630 : 84.5) no description available & (loc_os04g30430.1 : 46.2) no description available & (at3g25150 : 41.2) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: transport, nucleocytoplasmic transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain (TAIR:AT5G60980.2). & (chl4|518816 : 37.0) no description available & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46522 PE=4 SV=1)'" P '29.3.2' 'protein.targeting.mitochondria' 'tr|b7g916|b7g916_phatc' "'(gnl|cdd|37278 : 327.0) no description available & (loc_os01g53700.1 : 186.0) no description available & (p29677|mppa_soltu : 174.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (chl4|517566 : 171.0) no description available & (at1g51980 : 166.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (gnl|cdd|30957 : 164.0) no description available & (ipr011237 : 131.94049) Peptidase M16, core & (reliability: 332.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15689 PE=4 SV=1)'" P '29.3.2' 'protein.targeting.mitochondria' 'tr|b7g150|b7g150_phatc' "'(gnl|cdd|36178 : 547.0) no description available & (chl4|513348 : 472.0) no description available & (loc_os03g11410.1 : 469.0) no description available & (at3g02090 : 462.0) MPPBETA; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: in 11 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT1G51980.1); Has 13067 Blast hits to 12610 proteins in 2372 species: Archae - 22; Bacteria - 8565; Metazoa - 1070; Fungi - 780; Plants - 365; Viruses - 3; Other Eukaryotes - 2262 (source: NCBI BLink). & (gnl|cdd|30957 : 276.0) no description available & (ipr011237 : 252.94789) Peptidase M16, core & (p29677|mppa_soltu : 196.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (reliability: 924.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_20787 PE=3 SV=1)'" P '29.3.2' 'protein.targeting.mitochondria' 'tr|b7ftt7|b7ftt7_phatc' "'(gnl|cdd|37791 : 111.0) no description available & (at2g20510 : 103.0) One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane.; translocase inner membrane subunit 44-1 (TIM44-1); CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-2 (TAIR:AT2G36070.1); Has 902 Blast hits to 886 proteins in 331 species: Archae - 5; Bacteria - 250; Metazoa - 198; Fungi - 160; Plants - 71; Viruses - 2; Other Eukaryotes - 216 (source: NCBI BLink). & (loc_os07g22700.2 : 90.1) no description available & (gnl|cdd|80064 : 84.5) no description available & (chl4|516252 : 69.3) no description available & (ipr007379 : 46.102997) Membrane transporter, Tim44-related/Ribosomal protein L45 & (reliability: 286.68024) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44351 PE=4 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b5y5f3|b5y5f3_phatc' "'(gnl|cdd|67874 : 60.4) no description available & (ipr007378 : 46.482483) Tic22-like & (chl4|515506 : 38.1) no description available & (at3g23710 : 35.4) Tic22-like family protein; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT4G33350.1); Has 104 Blast hits to 104 proteins in 42 species: Archae - 0; Bacteria - 39; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 152.14435) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_54197 PE=4 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b7fxt4|b7fxt4_phatc' "'(gnl|cdd|30887 : 474.0) no description available & (gnl|cdd|35999 : 329.0) no description available & (loc_os11g05556.1 : 290.0) no description available & (at5g03940 : 278.0) mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit; chloroplast signal recognition particle 54 kDa subunit (CPSRP54); FUNCTIONS IN: 7S RNA binding, protein binding, mRNA binding, GTP binding, signal sequence binding; INVOLVED IN: protein import into chloroplast thylakoid membrane, SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; LOCATED IN: chloroplast stroma, chloroplast, signal recognition particle, chloroplast targeting, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP (InterPro:IPR004780), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: Signal recognition particle, SRP54 subunit protein (TAIR:AT1G48900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|512407 : 272.0) no description available & (ipr000897 : 157.41975) Signal recognition particle, SRP54 subunit, GTPase domain & (p49970|sr543_horvu : 127.0) Signal recognition particle 54 kDa protein 3 (SRP54) - Hordeum vulgare (Barley) & (reliability: 556.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35185 PE=4 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b7ft10|b7ft10_phatc' "'(loc_os01g05800.2 : 227.0) no description available & (at2g28800 : 223.0) member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.; ALBINO 3 (ALB3); CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: OxaA/YidC-like membrane insertion protein (TAIR:AT1G24490.1). & (q8lki3|alb32_chlre : 214.0) Inner membrane ALBINO3-like protein 2, chloroplast precursor - Chlamydomonas reinhardtii & (chl4|517716 : 214.0) no description available & (gnl|cdd|80865 : 186.0) no description available & (ipr001708 : 129.65811) Membrane insertase OXA1/ALB3/YidC & (gnl|cdd|36453 : 70.4) no description available & (reliability: 446.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43657 PE=3 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b7fxb8|b7fxb8_phatc' "'(chl4|511421 : 83.6) no description available & (at5g55710 : 77.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g49470.1 : 63.2) no description available & (p53683|cdpk2_orysa : 59.7) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (gnl|cdd|28933 : 55.9) no description available & (gnl|cdd|35250 : 53.1) no description available & (reliability: 151.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45335 PE=4 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b7s3w9|b7s3w9_phatc' "'(ipr011990 : 114.487404) Tetratricopeptide-like helical & (gnl|cdd|35770 : 109.0) no description available & (loc_os02g51810.1 : 74.3) no description available & (at5g09420 : 70.1) translocon at the outer membrane of chloroplasts 64-V (TOC64-V); FUNCTIONS IN: amidase activity, binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Amidase (InterPro:IPR000120), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-III (TAIR:AT3G17970.1); Has 28606 Blast hits to 25511 proteins in 2588 species: Archae - 476; Bacteria - 13320; Metazoa - 3833; Fungi - 2411; Plants - 1768; Viruses - 0; Other Eukaryotes - 6798 (source: NCBI BLink). & (chl4|520447 : 68.6) no description available & (gnl|cdd|29151 : 64.7) no description available & (q43468|stip_soybn : 63.2) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 140.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1626 PE=4 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'sp|a0t0g5|seca_phatc' "'(gnl|cdd|79335 : 1053.0) no description available & (loc_os01g21820.1 : 774.0) no description available & (at4g01800 : 761.0) Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.; Albino or Glassy Yellow 1 (AGY1); FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (q41062|seca_pea : 759.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (chl4|513224 : 582.0) no description available & (ipr011115 : 239.99648) SecA DEAD-like, N-terminal & (gnl|cdd|35554 : 37.7) no description available & (reliability: 1522.0) & (original description: Protein translocase subunit SecA OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=secA PE=3 SV=1)'" P '29.3.3' 'protein.targeting.chloroplast' 'tr|b7gef3|b7gef3_phatc' "'(at1g06950 : 38.1) Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis.; translocon at the inner envelope membrane of chloroplasts 110 (TIC110); INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: chloroplast, membrane, chloroplast envelope, Tic complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 131 Blast hits to 118 proteins in 52 species: Archae - 4; Bacteria - 6; Metazoa - 16; Fungi - 9; Plants - 66; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (loc_os07g16930.1 : 36.2) no description available & (chl4|510291 : 35.4) no description available & (reliability: 76.2) & (original description: Translocator of the inner chloroplast envelope membrane 110k OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tic110 PE=4 SV=1)'" P '29.3.4' 'protein.targeting.secretory pathway' 'tr|b7fye7|b7fye7_phatc' "'(gnl|cdd|36514 : 351.0) no description available & (gnl|cdd|85171 : 288.0) no description available & (ipr001619 : 260.5346) Sec1-like protein & (at4g12120 : 226.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 223.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (loc_os06g04450.2 : 223.0) no description available & (chl4|513293 : 105.0) no description available & (reliability: 436.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UNC18 PE=3 SV=1)'" P '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'tr|b7g8t6|b7g8t6_phatc' "'(gnl|cdd|70183 : 110.0) no description available & (at2g39960 : 90.9) Microsomal signal peptidase 25 kDa subunit (SPC25); FUNCTIONS IN: peptidase activity; INVOLVED IN: signal peptide processing; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: male gametophyte, callus; CONTAINS InterPro DOMAIN/s: Signal peptidase complex subunit 2 (InterPro:IPR009582); BEST Arabidopsis thaliana protein match is: Microsomal signal peptidase 25 kDa subunit (SPC25) (TAIR:AT4G04200.1); Has 283 Blast hits to 281 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 36; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (loc_os02g35720.1 : 80.9) no description available & (gnl|cdd|39275 : 56.2) no description available & (ipr009582 : 45.95639) Signal peptidase complex subunit 2 & (chl4|513355 : 44.3) no description available & (reliability: 181.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15399 PE=4 SV=1)'" P '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'tr|b7fy48|b7fy48_phatc' "'(gnl|cdd|37819 : 137.0) no description available & (gnl|cdd|86558 : 130.0) no description available & (at2g38960 : 104.0) endoplasmic reticulum oxidoreductin; endoplasmic reticulum oxidoreductins 2 (ERO2); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 1 (TAIR:AT1G72280.1). & (loc_os03g52340.1 : 94.7) no description available & (ipr007266 : 81.367004) Endoplasmic reticulum oxidoreductin 1 & (chl4|517574 : 72.8) no description available & (reliability: 208.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45572 PE=4 SV=1)'" P '29.3.4.1' 'protein.targeting.secretory pathway.ER' 'tr|b7g8v3|b7g8v3_phatc' "'(gnl|cdd|84916 : 74.6) no description available & (loc_os04g45190.3 : 72.8) no description available & (gnl|cdd|35660 : 63.0) no description available & (at4g00170 : 58.5) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (chl4|521426 : 53.9) no description available & (ipr008962 : 49.52547) PapD-like & (reliability: 106.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48918 PE=4 SV=1)'" P '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'tr|b5y3h2|b5y3h2_phatc' "'(gnl|cdd|37196 : 614.0) no description available & (chl4|518784 : 538.0) no description available & (loc_os04g04020.1 : 525.0) no description available & (at3g07100 : 516.0) Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology.; ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: transport, ER body organization; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: clone eighty-four (TAIR:AT3G44340.1); Has 86818 Blast hits to 46504 proteins in 1607 species: Archae - 60; Bacteria - 12149; Metazoa - 40940; Fungi - 13838; Plants - 8598; Viruses - 2013; Other Eukaryotes - 9220 (source: NCBI BLink). & (gnl|cdd|34633 : 476.0) no description available & (ipr006896 : 163.91432) Sec23/Sec24, trunk domain & (reliability: 1318.8501) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_13396 PE=4 SV=1)'" P '29.3.4.2' 'protein.targeting.secretory pathway.golgi' 'tr|b7fp49|b7fp49_phatc' "'(gnl|cdd|37197 : 906.0) no description available & (gnl|cdd|34652 : 763.0) no description available & (at3g23660 : 732.0) Sec23/Sec24 protein transport family protein; FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: intracellular protein transport, transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G14160.2). & (loc_os11g24560.1 : 694.0) no description available & (chl4|521082 : 693.0) no description available & (ipr006896 : 124.654305) Sec23/Sec24, trunk domain & (reliability: 1682.145) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Sec23 PE=4 SV=1)'" P '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'tr|b7fy79|b7fy79_phatc' "'(gnl|cdd|37484 : 159.0) no description available & (at5g06140 : 152.0) Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.; sorting nexin 1 (SNX1); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: in 7 processes; LOCATED IN: endosome, microsome, retromer complex, membrane, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g64280.1 : 145.0) no description available & (chl4|523496 : 144.0) no description available & (gnl|cdd|72740 : 111.0) no description available & (ipr015404 : 75.45468) Vps5 C-terminal & (reliability: 304.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_3137 PE=4 SV=1)'" P '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'tr|b7fqe8|b7fqe8_phatc' "'(gnl|cdd|37325 : 153.0) no description available & (loc_os04g31390.1 : 128.0) no description available & (at2g05170 : 106.0) Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.; vacuolar protein sorting 11 (VPS11); FUNCTIONS IN: transporter activity, binding, zinc ion binding; INVOLVED IN: vacuole organization; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 (InterPro:IPR016528), Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 716 Blast hits to 615 proteins in 203 species: Archae - 0; Bacteria - 2; Metazoa - 251; Fungi - 269; Plants - 42; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). & (chl4|512224 : 77.4) no description available & (reliability: 212.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43038 PE=4 SV=1)'" P '29.3.4.3' 'protein.targeting.secretory pathway.vacuole' 'tr|b7g5x7|b7g5x7_phatc' "'(at2g14720 : 184.0) encodes a vacuolar sorting receptor; vacuolar sorting receptor 4 (VSR4); FUNCTIONS IN: calcium ion binding; INVOLVED IN: protein targeting to vacuole; LOCATED IN: trans-Golgi network, integral to plasma membrane, vacuole, Golgi transport complex; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF-like (InterPro:IPR006210), Growth factor, receptor (InterPro:IPR009030), EGF-like region, conserved site (InterPro:IPR013032); BEST Arabidopsis thaliana protein match is: vaculolar sorting receptor 3 (TAIR:AT2G14740.2); Has 13354 Blast hits to 5993 proteins in 249 species: Archae - 2; Bacteria - 126; Metazoa - 12130; Fungi - 11; Plants - 500; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink). & (p93484|vsr1_pea : 184.0) Vacuolar sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) - Pisum sativum (Garden pea) & (loc_os10g20630.1 : 180.0) no description available & (chl4|512256 : 105.0) no description available & (gnl|cdd|80347 : 66.1) no description available & (gnl|cdd|37653 : 49.6) no description available & (reliability: 368.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48084 PE=4 SV=1)'" P '29.3.4.4' 'protein.targeting.secretory pathway.plasma membrane' 'tr|b7fqz3|b7fqz3_phatc' "'(gnl|cdd|36515 : 452.0) no description available & (gnl|cdd|85171 : 312.0) no description available & (at2g17980 : 305.0) member of SLY1 Gene Family; ATSLY1; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT4G31740.1); Has 1583 Blast hits to 1569 proteins in 233 species: Archae - 0; Bacteria - 15; Metazoa - 661; Fungi - 409; Plants - 204; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink). & (q851w1|sly1_orysa : 280.0) SEC1-family transport protein SLY1 - Oryza sativa (Rice) & (loc_os03g42320.1 : 280.0) no description available & (ipr001619 : 266.07025) Sec1-like protein & (chl4|513293 : 264.0) no description available & (reliability: 610.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SLY1 PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fsb1|b7fsb1_phatc' "'(gnl|cdd|36156 : 486.0) no description available & (at5g46630 : 463.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g46510.1 : 441.0) no description available & (chl4|523085 : 349.0) no description available & (ipr008968 : 192.6287) Clathrin adaptor, mu subunit, C-terminal & (gnl|cdd|85129 : 173.0) no description available & (reliability: 926.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AP2mu PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fr50|b7fr50_phatc' "'(loc_os01g16030.1 : 321.0) no description available & (at5g14670 : 317.0) A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1B (ARFA1B); FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 15123 Blast hits to 15104 proteins in 512 species: Archae - 14; Bacteria - 57; Metazoa - 7739; Fungi - 1956; Plants - 2039; Viruses - 3; Other Eukaryotes - 3315 (source: NCBI BLink). & (q06396|arf1_orysa : 315.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (chl4|520206 : 315.0) no description available & (gnl|cdd|47508 : 313.0) no description available & (gnl|cdd|35293 : 311.0) no description available & (ipr006689 : 173.80255) Small GTPase superfamily, ARF/SAR type & (reliability: 634.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Arf1 PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fx50|b7fx50_phatc' "'(at4g24550 : 413.0) Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1). & (loc_os07g42810.2 : 410.0) no description available & (chl4|519980 : 340.0) no description available & (gnl|cdd|36155 : 320.0) no description available & (ipr008968 : 144.88054) Clathrin adaptor, mu subunit, C-terminal & (gnl|cdd|85129 : 135.0) no description available & (p93648|lonh2_maize : 36.2) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (reliability: 826.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AP4mu PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b5y444|b5y444_phatc' "'(gnl|cdd|35999 : 484.0) no description available & (loc_os01g56600.1 : 421.0) no description available & (at1g48900 : 416.0) Signal recognition particle, SRP54 subunit protein; FUNCTIONS IN: 7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding; INVOLVED IN: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane; LOCATED IN: signal recognition particle, signal recognition particle, endoplasmic reticulum targeting; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Signal recognition particle, SRP54 subunit, helical bundle (InterPro:IPR013822), Signal recognition particle, SRP54 subunit, M-domain (InterPro:IPR004125), Signal recognition particle, SRP54 subunit (InterPro:IPR006325), Signal recognition particle, SRP54 subunit, GTPase (InterPro:IPR000897); BEST Arabidopsis thaliana protein match is: signal recognition particle 54 kDa subunit (TAIR:AT1G15310.1); Has 17287 Blast hits to 17282 proteins in 2918 species: Archae - 472; Bacteria - 10591; Metazoa - 363; Fungi - 288; Plants - 279; Viruses - 1; Other Eukaryotes - 5293 (source: NCBI BLink). & (gnl|cdd|30887 : 415.0) no description available & (p49970|sr543_horvu : 414.0) Signal recognition particle 54 kDa protein 3 (SRP54) - Hordeum vulgare (Barley) & (chl4|514309 : 370.0) no description available & (ipr000897 : 164.01117) Signal recognition particle, SRP54 subunit, GTPase domain & (reliability: 919.6209) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_13417 PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b5y403|b5y403_phatc' "'(gnl|cdd|39089 : 335.0) no description available & (ipr006762 : 200.14258) Gtr1/RagA G protein & (gnl|cdd|68248 : 182.0) no description available & (chl4|510716 : 39.7) no description available & (loc_os02g22140.1 : 39.3) no description available & (at5g67560 : 38.9) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1D (ARLA1D); FUNCTIONS IN: GTP binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51824|arf1_soltu : 37.4) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 77.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21147 PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fqv9|b7fqv9_phatc' "'(gnl|cdd|38708 : 97.6) no description available & (p38385|sc61g_orysa : 92.0) Protein transport protein SEC61 subunit gamma - Oryza sativa (Rice) & (loc_os02g08180.1 : 92.0) no description available & (at5g50460 : 90.9) secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein transport, protein targeting; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT4G24920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|512035 : 81.6) no description available & (gnl|cdd|32564 : 63.7) no description available & (reliability: 181.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17885 PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fri5|b7fri5_phatc' "'(gnl|cdd|36684 : 100.0) no description available & (loc_os02g24430.2 : 98.2) no description available & (chl4|520005 : 90.9) no description available & (at4g34580 : 90.1) Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.; CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (ipr001251 : 74.732544) CRAL-TRIO domain & (gnl|cdd|29115 : 73.5) no description available & (reliability: 178.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42504 PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fts0|b7fts0_phatc' "'(gnl|cdd|36684 : 64.8) no description available & (gnl|cdd|47819 : 54.6) no description available & (at2g21540 : 50.8) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (chl4|517465 : 47.0) no description available & (loc_os08g38850.2 : 43.1) no description available & (reliability: 101.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44341 PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7g5z1|b7g5z1_phatc' "'(gnl|cdd|36879 : 51.8) no description available & (loc_os06g50120.1 : 44.3) no description available & (chl4|514483 : 40.0) no description available & (gnl|cdd|47709 : 39.7) no description available & (at1g26670 : 38.1) member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.; VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 76.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54855 PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7g7h3|b7g7h3_phatc' "'(gnl|cdd|38553 : 93.4) no description available & (at1g60970 : 87.8) SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (loc_os01g62150.1 : 78.6) no description available & (chl4|525465 : 70.5) no description available & (gnl|cdd|35100 : 58.1) no description available & (reliability: 175.6) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_7018 PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7gd39|b7gd39_phatc' "'(ipr023201 : 1500.0) SecY subunit domain & (gnl|cdd|36587 : 727.0) no description available & (loc_os09g17840.1 : 699.0) no description available & (at1g29310 : 697.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|520885 : 675.0) no description available & (gnl|cdd|82683 : 372.0) no description available & (reliability: 1392.0) & (original description: Transport protein Sec61 alpha subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Sec61alpha PE=3 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7g602|b7g602_phatc' "'(gnl|cdd|36799 : 197.0) no description available & (p93798|snaa_vitvi : 144.0) Alpha-soluble NSF attachment protein (Alpha-SNAP) (N-ethylmaleimide-sensitive factor attachment protein, alpha) - Vitis vinifera (Grape) & (loc_os08g18110.1 : 135.0) no description available & (at3g56190 : 132.0) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis; alpha-soluble NSF attachment protein 2 (ALPHA-SNAP2); FUNCTIONS IN: soluble NSF attachment protein activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: NSF attachment protein (InterPro:IPR000744), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: alpha-soluble NSF attachment protein 1 (TAIR:AT3G56450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr011990 : 121.85469) Tetratricopeptide-like helical & (chl4|518964 : 120.0) no description available & (reliability: 264.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SNAP PE=4 SV=1)'" P '29.3.4.99' 'protein.targeting.secretory pathway.unspecified' 'tr|b7fye7|b7fye7_phatc' "'(gnl|cdd|36514 : 351.0) no description available & (gnl|cdd|85171 : 288.0) no description available & (ipr001619 : 260.5346) Sec1-like protein & (at4g12120 : 226.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 223.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (loc_os06g04450.2 : 223.0) no description available & (chl4|513293 : 105.0) no description available & (reliability: 452.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UNC18 PE=3 SV=1)'" P '29.3.5' 'protein.targeting.peroxisomes' 'tr|b7g1z9|b7g1z9_phatc' "'(gnl|cdd|36800 : 171.0) no description available & (ipr015943 : 85.27903) WD40/YVTN repeat-like-containing domain & (p27766|dyi3_chlre : 68.9) Dynein, 70 kDa intermediate chain, flagellar outer arm (IC69) (IC70) - Chlamydomonas reinhardtii & (chl4|512971 : 68.9) no description available & (gnl|cdd|29257 : 65.0) no description available & (at5g23730 : 42.7) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1); Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16; Bacteria - 2654; Metazoa - 3890; Fungi - 2899; Plants - 1307; Viruses - 0; Other Eukaryotes - 1524 (source: NCBI BLink). & (loc_os08g44010.5 : 41.2) no description available & (reliability: 78.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46969 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fpl1|b7fpl1_phatc' "'(gnl|cdd|35597 : 496.0) no description available & (at2g42810 : 456.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|524493 : 449.0) no description available & (loc_os05g11550.1 : 446.0) no description available & (gnl|cdd|29063 : 332.0) no description available & (p48489|pp1_orysa : 213.0) Serine/threonine-protein phosphatase PP1 (EC 3.1.3.16) - Oryza sativa (Rice) & (ipr004843 : 77.45499) Metallophosphoesterase domain & (reliability: 912.0) & (original description: PP5/FYPP plant-like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PPP5 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fr50|b7fr50_phatc' "'(loc_os01g16030.1 : 321.0) no description available & (at5g14670 : 317.0) A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ADP-ribosylation factor A1B (ARFA1B); FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 15123 Blast hits to 15104 proteins in 512 species: Archae - 14; Bacteria - 57; Metazoa - 7739; Fungi - 1956; Plants - 2039; Viruses - 3; Other Eukaryotes - 3315 (source: NCBI BLink). & (q06396|arf1_orysa : 315.0) ADP-ribosylation factor 1 (13 kDa cold-induced protein) - Oryza sativa (Rice) & (chl4|520206 : 315.0) no description available & (gnl|cdd|47508 : 313.0) no description available & (gnl|cdd|35293 : 311.0) no description available & (ipr006689 : 173.80255) Small GTPase superfamily, ARF/SAR type & (reliability: 634.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Arf1 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fs83|b7fs83_phatc' "'(gnl|cdd|35887 : 596.0) no description available & (at5g67380 : 514.0) casein kinase II catalytic subunit alpha; casein kinase alpha 1 (CKA1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase II, alpha chain 2 (TAIR:AT3G50000.1); Has 73369 Blast hits to 72658 proteins in 2362 species: Archae - 60; Bacteria - 7223; Metazoa - 28693; Fungi - 10783; Plants - 10981; Viruses - 246; Other Eukaryotes - 15383 (source: NCBI BLink). & (p28523|csk2a_maize : 511.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (loc_os07g02350.1 : 510.0) no description available & (chl4|516355 : 456.0) no description available & (gnl|cdd|84488 : 198.0) no description available & (ipr017442 : 131.30922) no description available & (reliability: 1028.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CK2_1 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fum9|b7fum9_phatc' "'(gnl|cdd|29142 : 292.0) no description available & (gnl|cdd|35256 : 283.0) no description available & (chl4|510399 : 216.0) no description available & (loc_os01g59360.1 : 201.0) no description available & (at1g12580 : 200.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (q6ret7|ccamk_medtr : 199.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (ipr017442 : 162.2026) no description available & (reliability: 374.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chk2 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fpr2|b7fpr2_phatc' "'(gnl|cdd|58034 : 276.0) no description available & (loc_os08g15040.1 : 253.0) no description available & (at2g24765 : 252.0) GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner; ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 9110 Blast hits to 9109 proteins in 393 species: Archae - 2; Bacteria - 4; Metazoa - 4531; Fungi - 1457; Plants - 1456; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink). & (gnl|cdd|35293 : 252.0) no description available & (chl4|513600 : 241.0) no description available & (p51824|arf1_soltu : 215.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (ipr006689 : 162.32039) Small GTPase superfamily, ARF/SAR type & (reliability: 504.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ARL1 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fyn4|b7fyn4_phatc' "'(chl4|521476 : 128.0) no description available & (loc_os12g01140.1 : 125.0) no description available & (at5g58140 : 122.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (q67ux0|ado2_orysa : 79.0) Putative adagio-like protein 2 - Oryza sativa (Rice) & (gnl|cdd|35722 : 53.9) no description available & (gnl|cdd|29035 : 48.0) no description available & (reliability: 244.0) & (original description: Uncharacterized protein PAS OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PAS PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b5y403|b5y403_phatc' "'(gnl|cdd|39089 : 335.0) no description available & (ipr006762 : 200.14258) Gtr1/RagA G protein & (gnl|cdd|68248 : 182.0) no description available & (chl4|510716 : 39.7) no description available & (loc_os02g22140.1 : 39.3) no description available & (at5g67560 : 38.9) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; ADP-ribosylation factor-like A1D (ARLA1D); FUNCTIONS IN: GTP binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51824|arf1_soltu : 37.4) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (reliability: 75.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21147 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b5y3h9|b5y3h9_phatc' "'(gnl|cdd|84923 : 61.8) no description available & (q7eyv7|parp1_orysa : 57.4) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Oryza sativa (Rice) & (loc_os07g23110.1 : 57.4) no description available & (at2g31320 : 52.4) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (ipr001510 : 39.048637) Zinc finger, PARP-type & (gnl|cdd|39638 : 37.4) no description available & (reliability: 104.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46698 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fun0|b7fun0_phatc' "'(gnl|cdd|36329 : 149.0) no description available & (ipr014710 : 108.2215) RmlC-like jelly roll fold & (chl4|510104 : 107.0) no description available & (loc_os02g17970.2 : 84.0) no description available & (gnl|cdd|28920 : 83.5) no description available & (at2g20050 : 73.6) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (reliability: 147.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10848 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fun1|b7fun1_phatc' "'(gnl|cdd|35836 : 284.0) no description available & (gnl|cdd|29142 : 236.0) no description available & (chl4|518479 : 232.0) no description available & (loc_os03g21620.1 : 190.0) no description available & (at3g08720 : 187.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 133.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (ipr017442 : 128.60829) no description available & (reliability: 348.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10865 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fwa9|b7fwa9_phatc' "'(ipr002554 : 1500.0) Protein phosphatase 2A, regulatory B subunit, B56 & (gnl|cdd|85563 : 565.0) no description available & (gnl|cdd|37296 : 514.0) no description available & (chl4|514281 : 427.0) no description available & (loc_os08g02860.1 : 412.0) no description available & (at3g26020 : 404.0) Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.; Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (reliability: 3433.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11741 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fxm5|b7fxm5_phatc' "'(gnl|cdd|73192 : 108.0) no description available & (loc_os03g25050.1 : 92.0) no description available & (gnl|cdd|36854 : 91.9) no description available & (at1g14980 : 87.4) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 83.2) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (ipr020818 : 76.97956) Chaperonin Cpn10 & (chl4|520331 : 59.3) no description available & (reliability: 161.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12004 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fxp2|b7fxp2_phatc' "'(loc_os09g07510.2 : 241.0) no description available & (at3g25800 : 237.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|512352 : 208.0) no description available & (gnl|cdd|35432 : 198.0) no description available & (p36875|2aaa_pea : 139.0) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (ipr011989 : 121.85469) Armadillo-like helical & (reliability: 474.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12174 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g0g2|b7g0g2_phatc' "'(at2g20050 : 270.0) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (chl4|510104 : 270.0) no description available & (loc_os02g17970.2 : 257.0) no description available & (gnl|cdd|29062 : 159.0) no description available & (gnl|cdd|35917 : 158.0) no description available & (ipr001932 : 147.48198) Protein phosphatase 2C-like & (reliability: 540.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12577 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g3f0|b7g3f0_phatc' "'(p42856|zb14_maize : 141.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (at3g56490 : 140.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; HIS triad family protein 3 (HIT3); FUNCTIONS IN: protein kinase C binding, adenylylsulfatase activity, zinc ion binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 7957 Blast hits to 7956 proteins in 2592 species: Archae - 148; Bacteria - 4849; Metazoa - 343; Fungi - 139; Plants - 127; Viruses - 0; Other Eukaryotes - 2351 (source: NCBI BLink). & (loc_os01g59750.1 : 140.0) no description available & (chl4|523322 : 138.0) no description available & (gnl|cdd|38485 : 133.0) no description available & (gnl|cdd|29589 : 128.0) no description available & (ipr011151 : 83.86065) no description available & (reliability: 280.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14064 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g5n3|b7g5n3_phatc' '(chl4|520170 : 154.0) no description available & (loc_os02g13640.1 : 131.0) no description available & (at5g19680 : 119.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G22320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35751 : 118.0) no description available & (gnl|cdd|29015 : 54.1) no description available & (q8lpb4|pskr_dauca : 38.1) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 238.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14518 PE=4 SV=1)' P '29.4' 'protein.postranslational modification' 'tr|b7fp23|b7fp23_phatc' '(gnl|cdd|80482 : 170.0) no description available & (gnl|cdd|36848 : 125.0) no description available & (ipr002569 : 114.29635) Peptide methionine sulphoxide reductase MsrA & (at5g07470 : 103.0) ubiquitous enzyme that repairs oxidatively damaged proteins; peptidemethionine sulfoxide reductase 3 (PMSR3); CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|522982 : 100.0) no description available & (p54151|msra_brana : 98.2) Peptide methionine sulfoxide reductase (EC 1.8.4.11) (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) - Brassica napus (Rape) & (loc_os04g40600.1 : 92.8) no description available & (reliability: 406.01862) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17362 PE=3 SV=1)' P '29.4' 'protein.postranslational modification' 'tr|b7ftu7|b7ftu7_phatc' "'(p48480|pp11_acecl : 493.0) Serine/threonine-protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) - Acetabularia cliftonii (Green alga) & (chl4|523738 : 491.0) no description available & (loc_os03g16110.3 : 490.0) no description available & (at5g59160 : 481.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 2 (TOPP2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 5 (TAIR:AT3G46820.1); Has 7217 Blast hits to 7021 proteins in 626 species: Archae - 78; Bacteria - 572; Metazoa - 2410; Fungi - 1415; Plants - 989; Viruses - 12; Other Eukaryotes - 1741 (source: NCBI BLink). & (gnl|cdd|35595 : 455.0) no description available & (gnl|cdd|47495 : 395.0) no description available & (ipr004843 : 91.410255) Metallophosphoesterase domain & (reliability: 962.0) & (original description: Serine/threonine-protein phosphatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18899 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g4g4|b7g4g4_phatc' "'(gnl|cdd|36378 : 374.0) no description available & (chl4|513892 : 338.0) no description available & (loc_os01g51200.2 : 337.0) no description available & (at4g26100 : 331.0) Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization.; casein kinase 1 (CK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasmodesma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase I-like 12 (TAIR:AT5G57015.1); Has 62578 Blast hits to 62222 proteins in 2324 species: Archae - 33; Bacteria - 9966; Metazoa - 23829; Fungi - 6469; Plants - 10923; Viruses - 370; Other Eukaryotes - 10988 (source: NCBI BLink). & (gnl|cdd|29142 : 139.0) no description available & (ipr017442 : 65.2274) no description available & (p53681|crk_dauca : 50.4) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 662.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21821 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g365|b7g365_phatc' "'(p25387|gblp_chlre : 439.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (chl4|514942 : 439.0) no description available & (gnl|cdd|35500 : 417.0) no description available & (at3g18130 : 404.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (loc_os05g47890.1 : 404.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (ipr015943 : 169.98582) WD40/YVTN repeat-like-containing domain & (reliability: 808.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28694 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g5m1|b7g5m1_phatc' "'(gnl|cdd|35499 : 298.0) no description available & (loc_os02g11060.1 : 271.0) no description available & (at1g15470 : 268.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species: Archae - 64; Bacteria - 7048; Metazoa - 15440; Fungi - 9730; Plants - 4355; Viruses - 0; Other Eukaryotes - 5016 (source: NCBI BLink). & (chl4|523944 : 232.0) no description available & (gnl|cdd|29257 : 130.0) no description available & (ipr015943 : 124.83389) WD40/YVTN repeat-like-containing domain & (q40507|gbb3_tobac : 65.9) Guanine nucleotide-binding protein subunit beta - Nicotiana tabacum (Common tobacco) & (reliability: 508.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29212 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fq87|b7fq87_phatc' "'(gnl|cdd|36329 : 207.0) no description available & (chl4|516303 : 159.0) no description available & (ipr014710 : 139.76454) RmlC-like jelly roll fold & (loc_os02g17970.1 : 105.0) no description available & (gnl|cdd|28920 : 91.6) no description available & (at2g20050 : 86.3) protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, regulation of protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1). & (q8vyx2|akt1_orysa : 36.2) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 172.6) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_3120 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 92.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fus2|b7fus2_phatc' "'(chl4|511507 : 171.0) no description available & (gnl|cdd|30575 : 124.0) no description available & (at1g58210 : 37.4) EMBRYO DEFECTIVE 1674 (EMB1674); CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G09720.1); Has 30818 Blast hits to 19641 proteins in 1442 species: Archae - 565; Bacteria - 3414; Metazoa - 15518; Fungi - 2982; Plants - 1779; Viruses - 78; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|35832 : 36.5) no description available & (reliability: 74.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44639 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fvt1|b7fvt1_phatc' "'(gnl|cdd|38397 : 123.0) no description available & (gnl|cdd|67978 : 109.0) no description available & (loc_os01g05694.1 : 96.3) no description available & (at5g10480 : 92.8) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (chl4|525293 : 77.8) no description available & (ipr007482 : 69.46322) Protein-tyrosine phosphatase-like, PTPLA & (reliability: 307.16064) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44831 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fwx2|b7fwx2_phatc' "'(gnl|cdd|35917 : 193.0) no description available & (gnl|cdd|29062 : 192.0) no description available & (ipr001932 : 180.23651) Protein phosphatase 2C-like & (at2g25620 : 149.0) Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.; DNA-binding protein phosphatase 1 (DBP1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: regulation of defense response to virus; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G33700.1); Has 7196 Blast hits to 7030 proteins in 671 species: Archae - 12; Bacteria - 774; Metazoa - 1729; Fungi - 719; Plants - 2627; Viruses - 7; Other Eukaryotes - 1328 (source: NCBI BLink). & (loc_os06g39600.2 : 149.0) no description available & (chl4|518299 : 124.0) no description available & (reliability: 298.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45230 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7fy56|b7fy56_phatc' "'(gnl|cdd|35524 : 357.0) no description available & (gnl|cdd|87748 : 170.0) no description available & (ipr015049 : 92.17597) Domain of unknown function DUF1900 & (q39336|gblp_brana : 68.9) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (at1g18080 : 67.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (chl4|512570 : 64.3) no description available & (loc_os01g49290.1 : 62.4) no description available & (reliability: 125.6) & (original description: Coronin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45580 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g286|b7g286_phatc' "'(gnl|cdd|47550 : 190.0) no description available & (gnl|cdd|35803 : 171.0) no description available & (at2g25090 : 125.0) Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16).; CBL-interacting protein kinase 16 (CIPK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 5 (TAIR:AT5G10930.1); Has 131103 Blast hits to 128839 proteins in 4426 species: Archae - 199; Bacteria - 15263; Metazoa - 48327; Fungi - 13205; Plants - 31908; Viruses - 544; Other Eukaryotes - 21657 (source: NCBI BLink). & (loc_os03g03510.1 : 120.0) no description available & (q6x4a2|cipk1_orysa : 115.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (chl4|523741 : 112.0) no description available & (ipr017442 : 92.94737) no description available & (reliability: 250.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47036 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g5m2|b7g5m2_phatc' "'(gnl|cdd|36457 : 247.0) no description available & (loc_os01g60440.1 : 195.0) no description available & (at2g40730 : 174.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 4566 Blast hits to 2083 proteins in 348 species: Archae - 0; Bacteria - 278; Metazoa - 876; Fungi - 585; Plants - 192; Viruses - 19; Other Eukaryotes - 2616 (source: NCBI BLink). & (chl4|514438 : 172.0) no description available & (gnl|cdd|47550 : 57.5) no description available & (ipr011989 : 55.262043) Armadillo-like helical & (p36875|2aaa_pea : 37.4) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (reliability: 348.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47998 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g8z1|b7g8z1_phatc' "'(gnl|cdd|37990 : 499.0) no description available & (at5g57020 : 401.0) Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.; myristoyl-CoA:protein N-myristoyltransferase (NMT1); CONTAINS InterPro DOMAIN/s: Myristoyl-CoA:protein N-myristoyltransferase (InterPro:IPR000903), Myristoyl-CoA:protein N-myristoyltransferase, conserved site (InterPro:IPR022678), Myristoyl-CoA:protein N-myristoyltransferase, N-terminal (InterPro:IPR022676), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Myristoyl-CoA:protein N-myristoyltransferase, C-terminal (InterPro:IPR022677); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G44175.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os01g51170.1 : 389.0) no description available & (chl4|522841 : 383.0) no description available & (gnl|cdd|34695 : 350.0) no description available & (ipr016181 : 216.10652) Acyl-CoA N-acyltransferase & (reliability: 802.0) & (original description: Glycylpeptide N-tetradecanoyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48947 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7gaj5|b7gaj5_phatc' "'(gnl|cdd|29261 : 67.0) no description available & (gnl|cdd|35729 : 60.8) no description available & (chl4|523541 : 55.8) no description available & (loc_os10g43040.1 : 55.5) no description available & (at2g03430 : 53.9) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 38.5) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (ipr020683 : 38.355488) Ankyrin repeat-containing domain & (reliability: 103.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49425 PE=4 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7frf1|b7frf1_phatc' "'(p48480|pp11_acecl : 542.0) Serine/threonine-protein phosphatase PP1 isozyme 1 (EC 3.1.3.16) - Acetabularia cliftonii (Green alga) & (chl4|523738 : 535.0) no description available & (loc_os03g16110.3 : 531.0) no description available & (at2g39840 : 518.0) Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.; type one serine/threonine protein phosphatase 4 (TOPP4); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7176 Blast hits to 6978 proteins in 618 species: Archae - 78; Bacteria - 533; Metazoa - 2415; Fungi - 1410; Plants - 987; Viruses - 16; Other Eukaryotes - 1737 (source: NCBI BLink). & (gnl|cdd|35595 : 473.0) no description available & (gnl|cdd|47495 : 404.0) no description available & (ipr004843 : 92.43191) Metallophosphoesterase domain & (reliability: 1036.0) & (original description: Serine/threonine-protein phosphatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50645 PE=3 SV=1)'" P '29.4' 'protein.postranslational modification' 'tr|b7g9j2|b7g9j2_phatc' "'(chl4|521476 : 128.0) no description available & (at3g45780 : 126.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os12g01140.5 : 126.0) no description available & (q5z8k3|ado1_orysa : 79.7) Adagio-like protein 1 - Oryza sativa (Rice) & (gnl|cdd|35722 : 52.4) no description available & (gnl|cdd|29035 : 49.9) no description available & (reliability: 250.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8113 PE=1 SV=1)'" P '29.4.1' 'protein.postranslational modification.kinase' 'tr|b7fum9|b7fum9_phatc' "'(gnl|cdd|29142 : 292.0) no description available & (gnl|cdd|35256 : 283.0) no description available & (chl4|510399 : 216.0) no description available & (loc_os01g59360.1 : 201.0) no description available & (at1g12580 : 200.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (q6ret7|ccamk_medtr : 199.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (ipr017442 : 162.2026) no description available & (reliability: 370.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chk2 PE=3 SV=1)'" P '29.5' 'protein.degradation' 'tr|b5y4r1|b5y4r1_phatc' "'(at5g42390 : 659.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) protein (TAIR:AT5G56730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os06g41990.2 : 643.0) no description available & (chl4|517576 : 553.0) no description available & (gnl|cdd|30957 : 143.0) no description available & (ipr011237 : 129.48949) Peptidase M16, core & (gnl|cdd|36177 : 128.0) no description available & (reliability: 1318.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10319 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7fvg8|b7fvg8_phatc' "'(gnl|cdd|37624 : 579.0) no description available & (loc_os07g10540.1 : 469.0) no description available & (at3g05350 : 465.0) Metallopeptidase M24 family protein; FUNCTIONS IN: hydrolase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: aminopeptidase P1 (TAIR:AT4G36760.1); Has 11788 Blast hits to 11217 proteins in 2602 species: Archae - 275; Bacteria - 7526; Metazoa - 334; Fungi - 310; Plants - 154; Viruses - 0; Other Eukaryotes - 3189 (source: NCBI BLink). & (gnl|cdd|29970 : 314.0) no description available & (chl4|526272 : 159.0) no description available & (ipr000994 : 133.28757) Peptidase M24, structural domain & (reliability: 930.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11174 PE=3 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7fvx9|b7fvx9_phatc' "'(gnl|cdd|80775 : 421.0) no description available & (at2g24200 : 315.0) Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30920.1). & (q6k669|ampl2_orysa : 310.0) Leucine aminopeptidase 2, chloroplast precursor (EC 3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase 2) - Oryza sativa (Rice) & (loc_os02g55140.1 : 310.0) no description available & (gnl|cdd|37808 : 288.0) no description available & (chl4|510759 : 283.0) no description available & (ipr000819 : 249.81862) Peptidase M17, leucyl aminopeptidase, C-terminal & (reliability: 630.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_1884 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7fsd7|b7fsd7_phatc' "'(at3g19170 : 875.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (loc_os02g52390.1 : 852.0) no description available & (gnl|cdd|37230 : 756.0) no description available & (gnl|cdd|31229 : 686.0) no description available & (chl4|511037 : 525.0) no description available & (ipr013578 : 112.238884) Peptidase M16C associated & (reliability: 1690.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_232 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7gee0|b7gee0_phatc' "'(gnl|cdd|31956 : 638.0) no description available & (loc_os06g51410.1 : 449.0) no description available & (chl4|517040 : 427.0) no description available & (gnl|cdd|37448 : 407.0) no description available & (at1g50380 : 400.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 7641 Blast hits to 7556 proteins in 1214 species: Archae - 80; Bacteria - 3203; Metazoa - 306; Fungi - 27; Plants - 212; Viruses - 0; Other Eukaryotes - 3813 (source: NCBI BLink). & (ipr023302 : 181.43422) Peptidase S9A, oligopeptidase, N-terminal & (reliability: 800.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24161 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g5m4|b7g5m4_phatc' "'(gnl|cdd|37987 : 309.0) no description available & (loc_os05g28280.1 : 265.0) no description available & (at3g51800 : 246.0) putative nuclear DNA-binding protein G2p (AtG2) mRNA,; ATG2; FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Proliferation-associated protein 1 (InterPro:IPR004545), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (chl4|515051 : 223.0) no description available & (gnl|cdd|73244 : 181.0) no description available & (ipr000994 : 111.66352) Peptidase M24, structural domain & (reliability: 492.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29217 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g5z3|b7g5z3_phatc' "'(loc_os08g44860.1 : 757.0) no description available & (at1g63770 : 743.0) Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1). & (chl4|517864 : 711.0) no description available & (gnl|cdd|30656 : 519.0) no description available & (gnl|cdd|36264 : 247.0) no description available & (ipr014782 : 129.39105) Peptidase M1, membrane alanine aminopeptidase, N-terminal & (reliability: 1486.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29309 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g824|b7g824_phatc' "'(gnl|cdd|36264 : 676.0) no description available & (at4g33090 : 579.0) encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).; aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink). & (loc_os02g12650.1 : 556.0) no description available & (gnl|cdd|30656 : 436.0) no description available & (ipr014782 : 291.78644) Peptidase M1, membrane alanine aminopeptidase, N-terminal & (chl4|518463 : 233.0) no description available & (reliability: 1158.0) & (original description: Aminopeptidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29758 PE=3 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7gb46|b7gb46_phatc' "'(gnl|cdd|83976 : 288.0) no description available & (ipr002142 : 83.472885) Peptidase S49 & (at1g73990 : 65.1) Encodes a putative protease SppA (SppA).; signal peptide peptidase (SPPA); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, response to light intensity; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S49, protease IV (InterPro:IPR004634), Peptidase S49 (InterPro:IPR002142), Peptidase S49, SppA (InterPro:IPR004635); Has 9340 Blast hits to 7649 proteins in 1706 species: Archae - 204; Bacteria - 6183; Metazoa - 9; Fungi - 4; Plants - 52; Viruses - 43; Other Eukaryotes - 2845 (source: NCBI BLink). & (chl4|523204 : 65.1) no description available & (loc_os02g49570.1 : 55.8) no description available & (reliability: 130.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4014 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g1l4|b7g1l4_phatc' "'(gnl|cdd|31694 : 581.0) no description available & (gnl|cdd|37448 : 230.0) no description available & (loc_os01g01830.1 : 177.0) no description available & (chl4|513726 : 176.0) no description available & (at1g20380 : 172.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G76140.1); Has 7989 Blast hits to 7898 proteins in 1359 species: Archae - 93; Bacteria - 3809; Metazoa - 313; Fungi - 45; Plants - 231; Viruses - 0; Other Eukaryotes - 3498 (source: NCBI BLink). & (ipr001375 : 100.6206) Peptidase S9, prolyl oligopeptidase, catalytic domain & (reliability: 344.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46548 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g659|b7g659_phatc' "'(gnl|cdd|36759 : 193.0) no description available & (chl4|513214 : 113.0) no description available & (gnl|cdd|84933 : 102.0) no description available & (loc_os10g41534.2 : 100.0) no description available & (at5g64240 : 97.8) metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr011600 : 88.02586) Peptidase C14, caspase catalytic & (reliability: 195.6) & (original description: Metacaspase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48151 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g6a3|b7g6a3_phatc' "'(gnl|cdd|30687 : 654.0) no description available & (gnl|cdd|37300 : 350.0) no description available & (at5g10540 : 295.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: cytosol, apoplast, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G65620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g58340.1 : 295.0) no description available & (chl4|514388 : 269.0) no description available & (ipr001567 : 245.5437) Peptidase M3A/M3B & (reliability: 590.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48190 PE=3 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7gcr7|b7gcr7_phatc' '(at1g67700 : 55.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. & (loc_os02g38820.1 : 47.4) no description available & (gnl|cdd|37023 : 35.2) no description available & (reliability: 110.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50051 PE=4 SV=1)' P '29.5' 'protein.degradation' 'tr|b7g6d0|b7g6d0_phatc' "'(gnl|cdd|36759 : 189.0) no description available & (chl4|521165 : 117.0) no description available & (at1g02170 : 115.0) Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain; metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (loc_os10g41534.1 : 115.0) no description available & (gnl|cdd|84933 : 102.0) no description available & (ipr011600 : 86.542725) Peptidase C14, caspase catalytic & (reliability: 230.0) & (original description: Metacaspase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54872 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g6d3|b7g6d3_phatc' "'(gnl|cdd|36759 : 175.0) no description available & (loc_os03g27190.1 : 108.0) no description available & (at5g64240 : 102.0) metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|513214 : 98.6) no description available & (gnl|cdd|84933 : 90.8) no description available & (ipr011600 : 74.761536) Peptidase C14, caspase catalytic & (reliability: 204.0) & (original description: Metacaspase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54873 PE=4 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7fpg9|b7fpg9_phatc' "'(ipr001567 : 1500.0) Peptidase M3A/M3B & (gnl|cdd|30687 : 695.0) no description available & (loc_os02g58340.1 : 636.0) no description available & (at5g65620 : 616.0) Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G10540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|514388 : 596.0) no description available & (gnl|cdd|37300 : 557.0) no description available & (reliability: 1232.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8670 PE=3 SV=1)'" P '29.5' 'protein.degradation' 'tr|b7g5l2|b7g5l2_phatc' "'(at2g06510 : 290.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g53680.1 : 256.0) no description available & (chl4|517486 : 195.0) no description available & (gnl|cdd|72071 : 150.0) no description available & (ipr012340 : 125.25588) Nucleic acid-binding, OB-fold & (gnl|cdd|36069 : 39.1) no description available & (reliability: 580.0) & (original description: Replication protein a large 70 kD subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPA1 PE=4 SV=1)'" P '29.5.11' 'protein.degradation.ubiquitin' 'tr|b7ftw2|b7ftw2_phatc' '(gnl|cdd|37027 : 276.0) no description available & (gnl|cdd|66804 : 260.0) no description available & (at2g21270 : 239.0) ubiquitin fusion degradation 1 (UFD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G38930.2); Has 705 Blast hits to 703 proteins in 222 species: Archae - 8; Bacteria - 2; Metazoa - 165; Fungi - 211; Plants - 127; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (loc_os02g08480.1 : 225.0) no description available & (chl4|515236 : 216.0) no description available & (ipr004854 : 155.32303) Ubiquitin fusion degradation protein UFD1 & (reliability: 749.8153) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hUfd1 PE=4 SV=1)' P '29.5.11' 'protein.degradation.ubiquitin' 'tr|b7fz62|b7fz62_phatc' "'(gnl|cdd|37253 : 294.0) no description available & (at5g15400 : 221.0) U-box domain-containing protein; FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin-ubiquitin ligase activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin conjugation factor E4, core (InterPro:IPR019474), U box domain (InterPro:IPR003613); Has 1036 Blast hits to 1011 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 503; Fungi - 218; Plants - 177; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (gnl|cdd|34716 : 216.0) no description available & (loc_os03g31400.1 : 207.0) no description available & (chl4|526051 : 205.0) no description available & (ipr019474 : 191.73074) Ubiquitin conjugation factor E4, core & (reliability: 442.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hUfd2 PE=4 SV=1)'" P '29.5.11' 'protein.degradation.ubiquitin' 'tr|b7ftq2|b7ftq2_phatc' "'(gnl|cdd|35234 : 162.0) no description available & (at2g17200 : 131.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (loc_os10g39620.2 : 117.0) no description available & (chl4|515751 : 84.7) no description available & (gnl|cdd|29171 : 67.2) no description available & (p14624|ubiq_chlre : 37.4) Ubiquitin - Chlamydomonas reinhardtii & (reliability: 262.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44323 PE=4 SV=1)'" P '29.5.11' 'protein.degradation.ubiquitin' 'tr|b5y4y5|b5y4y5_phatc' "'(gnl|cdd|38095 : 222.0) no description available & (gnl|cdd|29225 : 180.0) no description available & (loc_os03g13970.2 : 148.0) no description available & (at4g38630 : 144.0) Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities; regulatory particle non-ATPase 10 (RPN10); FUNCTIONS IN: peptide receptor activity; INVOLVED IN: in 19 processes; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ssl1-like (InterPro:IPR007198), Ubiquitin interacting motif (InterPro:IPR003903), von Willebrand factor, type A (InterPro:IPR002035); Has 677 Blast hits to 665 proteins in 240 species: Archae - 0; Bacteria - 16; Metazoa - 271; Fungi - 148; Plants - 120; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (chl4|516310 : 129.0) no description available & (reliability: 288.0) & (original description: Regulatory proteasome non-atpase subunit 10 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN10 PE=4 SV=1)'" P '29.5.11.1' 'protein.degradation.ubiquitin.ubiquitin' 'tr|b7ftq2|b7ftq2_phatc' "'(gnl|cdd|35234 : 162.0) no description available & (at2g17200 : 131.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (loc_os10g39620.2 : 117.0) no description available & (chl4|515751 : 84.7) no description available & (gnl|cdd|29171 : 67.2) no description available & (p14624|ubiq_chlre : 37.4) Ubiquitin - Chlamydomonas reinhardtii & (reliability: 258.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44323 PE=4 SV=1)'" P '29.5.11.2' 'protein.degradation.ubiquitin.E1' 'tr|b7g3z1|b7g3z1_phatc' "'(ipr016040 : 1500.0) NAD(P)-binding domain & (gnl|cdd|37223 : 1114.0) no description available & (loc_os11g01510.3 : 728.0) no description available & (at5g06460 : 724.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.; ubiquitin activating enzyme 2 (UBA 2); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin-activating enzyme 1 (TAIR:AT2G30110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p20973|ube11_wheat : 724.0) Ubiquitin-activating enzyme E1 1 - Triticum aestivum (Wheat) & (chl4|525800 : 635.0) no description available & (gnl|cdd|73269 : 459.0) no description available & (reliability: 1525.2358) & (original description: Ubiquitin-activating enzyme E1, protein 2 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hUba1 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7frp2|b7frp2_phatc' "'(gnl|cdd|36769 : 312.0) no description available & (at5g05780 : 290.0) Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity.; RP non-ATPase subunit 8A (RPN8A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process, leaf morphogenesis; LOCATED IN: proteasome complex, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2). & (chl4|514973 : 266.0) no description available & (loc_os04g56646.1 : 127.0) no description available & (gnl|cdd|85425 : 84.3) no description available & (ipr000555 : 38.73848) JAB1/Mov34/MPN/PAD-1 & (reliability: 580.0) & (original description: Regulatory proteasome non-atpase subunit 8 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN8 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fvl7|b7fvl7_phatc' "'(gnl|cdd|37273 : 782.0) no description available & (gnl|cdd|34718 : 623.0) no description available & (chl4|517679 : 556.0) no description available & (at2g32730 : 555.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (loc_os08g12820.1 : 546.0) no description available & (ipr011989 : 38.881584) Armadillo-like helical & (reliability: 1110.0) & (original description: Regulatory proteasome non-atpase subunit 2 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN2 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fvp7|b7fvp7_phatc' "'(gnl|cdd|38186 : 240.0) no description available & (loc_os05g01450.1 : 167.0) no description available & (at2g39990 : 155.0) translation initiation factor eIF2 p47 subunit homolog; eukaryotic translation initiation factor 2 (EIF2); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: pollen germination, translational initiation, embryo development; LOCATED IN: eukaryotic translation initiation factor 3 complex, nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2); Has 1103 Blast hits to 1103 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 269; Plants - 187; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). & (chl4|516116 : 149.0) no description available & (gnl|cdd|85425 : 82.3) no description available & (ipr000555 : 35.083504) JAB1/Mov34/MPN/PAD-1 & (reliability: 310.0) & (original description: COP9 SigNalosome subunit 6 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CSN6 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b5y3q6|b5y3q6_phatc' "'(gnl|cdd|35397 : 358.0) no description available & (gnl|cdd|48451 : 343.0) no description available & (q9lsu1|psa5_orysa : 317.0) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S proteasome alpha subunit E) (20S proteasome subunit alpha-5) - Oryza sativa (Rice) & (loc_os11g40140.1 : 317.0) no description available & (at3g14290 : 312.0) Encodes 20S proteasome subunit PAE2 (PAE2).; 20S proteasome alpha subunit E2 (PAE2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E1 (TAIR:AT1G53850.2); Has 8015 Blast hits to 8011 proteins in 570 species: Archae - 901; Bacteria - 216; Metazoa - 2770; Fungi - 1923; Plants - 1008; Viruses - 0; Other Eukaryotes - 1197 (source: NCBI BLink). & (chl4|517599 : 298.0) no description available & (ipr001353 : 122.19953) Proteasome, subunit alpha/beta & (reliability: 837.8492) & (original description: Proteasome subunit alpha type OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_28202 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b5y3s3|b5y3s3_phatc' "'(gnl|cdd|35948 : 715.0) no description available & (q9fxt9|prs7_orysa : 669.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (loc_os06g09290.1 : 669.0) no description available & (at1g53750 : 664.0) 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,; regulatory particle triple-A 1A (RPT1A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases (TAIR:AT1G53780.2); Has 30646 Blast hits to 28391 proteins in 3108 species: Archae - 1452; Bacteria - 10350; Metazoa - 4866; Fungi - 3564; Plants - 3128; Viruses - 30; Other Eukaryotes - 7256 (source: NCBI BLink). & (chl4|515496 : 644.0) no description available & (gnl|cdd|31415 : 523.0) no description available & (ipr003959 : 84.85918) ATPase, AAA-type, core & (reliability: 1328.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_28219 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b5y4i5|b5y4i5_phatc' "'(gnl|cdd|35945 : 499.0) no description available & (chl4|524554 : 470.0) no description available & (at4g29040 : 468.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (loc_os03g18690.1 : 464.0) no description available & (p46466|prs4_orysa : 463.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (gnl|cdd|31415 : 441.0) no description available & (ipr003959 : 84.790184) ATPase, AAA-type, core & (reliability: 936.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_41778 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fx87|b7fx87_phatc' "'(gnl|cdd|35946 : 613.0) no description available & (at5g58290 : 575.0) 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,; regulatory particle triple-A ATPase 3 (RPT3); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g21970.1 : 575.0) no description available & (chl4|526137 : 569.0) no description available & (p54778|prs6b_soltu : 563.0) 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato) & (gnl|cdd|31415 : 495.0) no description available & (ipr003959 : 94.8215) ATPase, AAA-type, core & (reliability: 1150.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11735 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fu90|b7fu90_phatc' "'(gnl|cdd|48453 : 317.0) no description available & (gnl|cdd|35404 : 291.0) no description available & (chl4|511244 : 260.0) no description available & (q9sxu1|psa7_cicar : 253.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (loc_os09g36710.1 : 251.0) no description available & (at5g66140 : 250.0) Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.; proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (ipr001353 : 117.33653) Proteasome, subunit alpha/beta & (reliability: 705.3389) & (original description: Proteasome subunit alpha type OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19004 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fvs5|b7fvs5_phatc' "'(gnl|cdd|48456 : 235.0) no description available & (gnl|cdd|35398 : 207.0) no description available & (q9lst6|psb2_orysa : 204.0) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4) - Oryza sativa (Rice) & (loc_os03g48930.1 : 204.0) no description available & (at4g14800 : 199.0) Encodes 20S proteasome beta subunit PBD2 (PBD2).; 20S proteasome beta subunit D2 (PBD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit D1 (TAIR:AT3G22630.1). & (chl4|515181 : 162.0) no description available & (ipr001353 : 80.254005) Proteasome, subunit alpha/beta & (reliability: 538.4445) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19341 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fy14|b7fy14_phatc' "'(gnl|cdd|35396 : 355.0) no description available & (gnl|cdd|48459 : 329.0) no description available & (chl4|510489 : 298.0) no description available & (o24361|psb5_spiol : 289.0) Proteasome subunit beta type 5 precursor (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain) - Spinacia oleracea (Spinach) & (at1g13060 : 281.0) Encodes 20S proteasome beta subunit PBE1 (PBE1).; 20S proteasome beta subunit E1 (PBE1); FUNCTIONS IN: peptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: guard cell, pollen tube; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G26340.1). & (loc_os06g06030.1 : 270.0) no description available & (ipr001353 : 109.607796) Proteasome, subunit alpha/beta & (reliability: 753.81366) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_20007 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fp06|b7fp06_phatc' "'(gnl|cdd|48450 : 320.0) no description available & (gnl|cdd|35399 : 298.0) no description available & (at3g22110 : 276.0) Encodes the alpha-3 subunit of 20s proteasome.; 20S proteasome alpha subunit C1 (PAC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G15165.1); Has 7432 Blast hits to 7428 proteins in 553 species: Archae - 896; Bacteria - 261; Metazoa - 2465; Fungi - 1789; Plants - 945; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (p52427|psa4_spiol : 271.0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) - Spinacia oleracea (Spinach) & (loc_os06g07978.1 : 267.0) no description available & (chl4|509576 : 253.0) no description available & (ipr001353 : 105.65655) Proteasome, subunit alpha/beta & (reliability: 736.8989) & (original description: Proteasome subunit alpha type OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24474 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7g8z3|b7g8z3_phatc' "'(gnl|cdd|48457 : 334.0) no description available & (gnl|cdd|35401 : 328.0) no description available & (q9lst7|psb3_orysa : 273.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (loc_os06g43570.1 : 273.0) no description available & (at1g21720 : 266.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (chl4|523200 : 263.0) no description available & (ipr001353 : 83.78466) Proteasome, subunit alpha/beta & (reliability: 678.62317) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30003 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7g9a4|b7g9a4_phatc' "'(gnl|cdd|35947 : 652.0) no description available & (chl4|521984 : 582.0) no description available & (at5g20000 : 575.0) AAA-type ATPase family protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 6A (TAIR:AT5G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g11050.1 : 566.0) no description available & (gnl|cdd|31415 : 514.0) no description available & (o64982|prs7_prupe : 304.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Prunus persica (Peach) & (ipr003959 : 89.705505) ATPase, AAA-type, core & (reliability: 1150.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30067 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fu93|b7fu93_phatc' "'(gnl|cdd|35961 : 488.0) no description available & (at3g03060 : 310.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (loc_os02g46990.1 : 301.0) no description available & (chl4|511823 : 292.0) no description available & (ipr021911 : 166.03459) ATPase family AAA domain-containing protein 3, domain of unknown function DUF3523 & (gnl|cdd|84432 : 101.0) no description available & (p46465|prs6a_orysa : 74.3) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Oryza sativa (Rice) & (reliability: 620.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44478 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fwj1|b7fwj1_phatc' "'(chl4|517293 : 548.0) no description available & (loc_os02g10640.1 : 546.0) no description available & (at5g43010 : 541.0) 26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA,; regulatory particle triple-A ATPase 4A (RPT4A); FUNCTIONS IN: ATPase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G45000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|35870 : 506.0) no description available & (gnl|cdd|31415 : 488.0) no description available & (q9fxt9|prs7_orysa : 311.0) 26S protease regulatory subunit 7 (26S proteasome subunit 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) - Oryza sativa (Rice) & (ipr003959 : 87.02823) ATPase, AAA-type, core & (reliability: 1082.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45122 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7g274|b7g274_phatc' '(gnl|cdd|37964 : 116.0) no description available & (at5g15610 : 110.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). & (loc_os04g01290.3 : 97.4) no description available & (gnl|cdd|85426 : 47.2) no description available & (chl4|526444 : 44.7) no description available & (reliability: 220.0) & (original description: Eukaryotic translation initiation factor 3 subunit M OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47027 PE=3 SV=1)' P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7gc84|b7gc84_phatc' "'(gnl|cdd|48448 : 355.0) no description available & (gnl|cdd|35402 : 324.0) no description available & (q9lsu2|psa2_orysa : 317.0) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2) - Oryza sativa (Rice) & (loc_os02g42320.2 : 317.0) no description available & (at1g16470 : 310.0) Encodes 20S proteasome subunit PAB1 (PAB1).; proteasome subunit PAB1 (PAB1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT1G79210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|525502 : 308.0) no description available & (ipr001353 : 121.343864) Proteasome, subunit alpha/beta & (reliability: 830.35175) & (original description: Proteasome endopeptidase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49897 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7ful2|b7ful2_phatc' "'(gnl|cdd|48460 : 270.0) no description available & (gnl|cdd|35395 : 263.0) no description available & (loc_os02g53060.1 : 227.0) no description available & (at4g31300 : 225.0) Encodes 20S proteasome subunit PBA1 (PBA1).; PBA1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353), Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit PBB2 (TAIR:AT5G40580.2). & (p93395|psb6_tobac : 211.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (chl4|523449 : 196.0) no description available & (ipr001353 : 96.996254) Proteasome, subunit alpha/beta & (reliability: 619.7434) & (original description: Proteasome beta subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51691 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fzp1|b7fzp1_phatc' "'(gnl|cdd|48461 : 302.0) no description available & (gnl|cdd|35394 : 299.0) no description available & (at5g40580 : 268.0) Encodes 20S proteasome beta subunit PBB2 (PBB2).; 20S proteasome beta subunit PBB2 (PBB2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T1A, proteasome beta-subunit (InterPro:IPR000243), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G27430.3). & (loc_os05g09490.2 : 261.0) no description available & (chl4|509711 : 243.0) no description available & (p93395|psb6_tobac : 106.0) Proteasome subunit beta type 6 precursor (EC 3.4.25.1) (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) - Nicotiana tabacum (Common tobacco) & (ipr001353 : 96.70857) Proteasome, subunit alpha/beta & (reliability: 705.24) & (original description: Proteasome subunit beta type (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_5311 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7frj8|b7frj8_phatc' "'(gnl|cdd|48452 : 299.0) no description available & (gnl|cdd|35403 : 294.0) no description available & (at5g35590 : 248.0) Encodes 20S proteasome subunit PAA1 (PAA1).; proteasome alpha subunit A1 (PAA1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to zinc ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: cotyledon, fruit, guard cell, cultured cell; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome subunit PAA2 (TAIR:AT2G05840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o48551|psa6_soybn : 245.0) Proteasome subunit alpha type 6 (EC 3.4.25.1) (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) (Proteasome iota subunit) - Glycine max (Soybean) & (loc_os03g08280.2 : 236.0) no description available & (chl4|517191 : 225.0) no description available & (ipr001353 : 92.35187) Proteasome, subunit alpha/beta & (reliability: 657.6158) & (original description: Proteasome endopeptidase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_53939 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7gcr3|b7gcr3_phatc' "'(gnl|cdd|48449 : 267.0) no description available & (gnl|cdd|35405 : 266.0) no description available & (at2g27020 : 215.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (q9lsu0|psa3_orysa : 207.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) - Oryza sativa (Rice) & (loc_os01g59600.2 : 207.0) no description available & (chl4|515372 : 200.0) no description available & (ipr001353 : 70.547226) Proteasome, subunit alpha/beta & (reliability: 553.45764) & (original description: Proteasome subunit alpha type (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_5685 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7frc7|b7frc7_phatc' "'(gnl|cdd|35871 : 594.0) no description available & (at3g05530 : 536.0) Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.; regulatory particle triple-A ATPase 5A (RPT5A); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: 26S proteasome AAA-ATPase subunit RPT5B (TAIR:AT1G09100.1); Has 33265 Blast hits to 30927 proteins in 3145 species: Archae - 1437; Bacteria - 12044; Metazoa - 4947; Fungi - 3672; Plants - 3322; Viruses - 56; Other Eukaryotes - 7787 (source: NCBI BLink). & (loc_os06g07630.1 : 536.0) no description available & (p46465|prs6a_orysa : 535.0) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Oryza sativa (Rice) & (chl4|510008 : 520.0) no description available & (gnl|cdd|31415 : 454.0) no description available & (ipr003959 : 79.75757) ATPase, AAA-type, core & (reliability: 1072.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9090 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7s4l0|b7s4l0_phatc' "'(gnl|cdd|48455 : 182.0) no description available & (gnl|cdd|35400 : 169.0) no description available & (o64464|psb1_orysa : 149.0) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6) - Oryza sativa (Rice) & (loc_os09g32800.1 : 149.0) no description available & (at3g60820 : 147.0) Encodes 20S proteasome beta subunit PBF1 (PBF1).; PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1). & (chl4|522780 : 51.2) no description available & (reliability: 294.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd611 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7s3t6|b7s3t6_phatc' "'(gnl|cdd|48458 : 243.0) no description available & (gnl|cdd|35406 : 233.0) no description available & (at1g56450 : 190.0) 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds; 20S proteasome beta subunit G1 (PBG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome endopeptidase complex, beta subunit (InterPro:IPR016295), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT4G31300.2); Has 2530 Blast hits to 2530 proteins in 413 species: Archae - 597; Bacteria - 46; Metazoa - 632; Fungi - 578; Plants - 277; Viruses - 0; Other Eukaryotes - 400 (source: NCBI BLink). & (loc_os09g33986.2 : 177.0) no description available & (chl4|523491 : 173.0) no description available & (ipr001353 : 67.76922) Proteasome, subunit alpha/beta & (q9lst6|psb2_orysa : 58.2) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4) - Oryza sativa (Rice) & (reliability: 498.59613) & (original description: Proteasome subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd866 PE=3 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7g2f7|b7g2f7_phatc' "'(gnl|cdd|37216 : 924.0) no description available & (at2g20580 : 789.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (loc_os09g15750.1 : 783.0) no description available & (chl4|512002 : 752.0) no description available & (gnl|cdd|34713 : 726.0) no description available & (reliability: 1578.0) & (original description: Regulatory proteasome non-atpase subunit 1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN1 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fzy2|b7fzy2_phatc' "'(gnl|cdd|38361 : 163.0) no description available & (loc_os07g25420.1 : 110.0) no description available & (at1g64520 : 109.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (chl4|517257 : 107.0) no description available & (gnl|cdd|67037 : 90.0) no description available & (ipr005062 : 40.804676) SAC3/GANP/Nin1/mts3/eIF-3 p25 & (reliability: 218.0) & (original description: Regulatory proteasome non-atpase subunit 12 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN12 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fpp8|b7fpp8_phatc' "'(gnl|cdd|37792 : 341.0) no description available & (loc_os08g43640.3 : 249.0) no description available & (at1g20200 : 238.0) EMBRYO DEFECTIVE 2719 (EMB2719); FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G75990.1); Has 763 Blast hits to 760 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 164; Plants - 180; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (chl4|523380 : 234.0) no description available & (p93768|psmd3_tobac : 229.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (gnl|cdd|87512 : 80.7) no description available & (ipr013586 : 38.807476) 26S proteasome regulatory subunit, C-terminal & (reliability: 476.0) & (original description: Regulatory proteasome non-atpase subunit 3 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN3 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fqa9|b7fqa9_phatc' "'(gnl|cdd|36711 : 325.0) no description available & (gnl|cdd|34675 : 270.0) no description available & (loc_os03g63430.1 : 216.0) no description available & (at5g09900 : 215.0) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.; EMBRYO DEFECTIVE 2107 (EMB2107); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, embryo development ending in seed dormancy; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|525170 : 203.0) no description available & (ipr011991 : 54.19733) Winged helix-turn-helix transcription repressor DNA-binding & (reliability: 430.0) & (original description: Regulatory proteasome non-atpase subunit 5 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN5 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7g3s4|b7g3s4_phatc' "'(gnl|cdd|36676 : 367.0) no description available & (gnl|cdd|34760 : 322.0) no description available & (loc_os04g36700.1 : 278.0) no description available & (at1g29150 : 276.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (chl4|518932 : 258.0) no description available & (ipr011991 : 50.8432) Winged helix-turn-helix transcription repressor DNA-binding & (reliability: 552.0) & (original description: Regulatory proteasome non-atpase subunit 6 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN6 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7ft78|b7ft78_phatc' "'(gnl|cdd|35906 : 306.0) no description available & (at4g24820 : 258.0) 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8w425|psmd6_orysa : 253.0) 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) & (loc_os04g40850.1 : 253.0) no description available & (chl4|514567 : 241.0) no description available & (gnl|cdd|34786 : 231.0) no description available & (ipr019585 : 64.95042) 26S proteasome, regulatory subunit Rpn7 & (reliability: 516.0) & (original description: Regulatory proteasome non-atpase subunit 7 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN7 PE=4 SV=1)'" P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|b7fxg8|b7fxg8_phatc' '(gnl|cdd|38119 : 214.0) no description available & (at4g19006 : 179.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (loc_os03g11570.1 : 167.0) no description available & (chl4|515904 : 150.0) no description available & (gnl|cdd|85426 : 58.3) no description available & (reliability: 358.0) & (original description: Regulatory proteasome non-atpase subunit 9 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RPN9 PE=4 SV=1)' P '29.5.11.20' 'protein.degradation.ubiquitin.proteasom' 'tr|a0t0g7|a0t0g7_phatc' "'(gnl|cdd|30812 : 182.0) no description available & (gnl|cdd|35949 : 134.0) no description available & (loc_os08g31870.1 : 112.0) no description available & (at3g53230 : 107.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 107.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (chl4|517510 : 107.0) no description available & (ipr003959 : 60.758812) ATPase, AAA-type, core & (reliability: 192.6) & (original description: Uncharacterized protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf46 PE=4 SV=1)'" P '29.5.11.3' 'protein.degradation.ubiquitin.E2' 'tr|b7g0n3|b7g0n3_phatc' "'(at1g78870 : 218.0) UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B.; ubiquitin-conjugating enzyme 35 (UBC35); FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding; INVOLVED IN: root epidermal cell differentiation, response to cadmium ion, postreplication repair, response to iron ion, ubiquitin-dependent protein catabolic process; LOCATED IN: UBC13-MMS2 complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 36 (TAIR:AT1G16890.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35638 : 216.0) no description available & (loc_os01g48280.1 : 214.0) no description available & (chl4|511156 : 212.0) no description available & (gnl|cdd|34682 : 175.0) no description available & (ipr016135 : 141.56636) Ubiquitin-conjugating enzyme/RWD-like & (p25866|ubc2_wheat : 123.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 611.4972) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36198 PE=3 SV=1)'" P '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'tr|b7fva7|b7fva7_phatc' "'(gnl|cdd|35977 : 43.3) no description available & (loc_os02g10740.1 : 37.0) no description available & (at4g13100 : 35.8) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G25030.2). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45016 PE=4 SV=1)'" P '29.5.11.4.2' 'protein.degradation.ubiquitin.E3.RING' 'tr|b7g6x2|b7g6x2_phatc' "'(at1g08050 : 134.0) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60710.1); Has 3591 Blast hits to 3577 proteins in 633 species: Archae - 55; Bacteria - 1268; Metazoa - 812; Fungi - 224; Plants - 715; Viruses - 5; Other Eukaryotes - 512 (source: NCBI BLink). & (loc_os03g04890.1 : 133.0) no description available & (gnl|cdd|29238 : 96.8) no description available & (chl4|519671 : 79.0) no description available & (gnl|cdd|37564 : 47.6) no description available & (reliability: 268.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54892 PE=4 SV=1)'" P '29.5.11.4.3.2' 'protein.degradation.ubiquitin.E3.SCF.FBOX' 'tr|b7gc67|b7gc67_phatc' "'(ipr015915 : 129.81227) Kelch-type beta propeller & (gnl|cdd|39642 : 106.0) no description available & (chl4|521335 : 44.3) no description available & (gnl|cdd|85395 : 40.7) no description available & (at1g67480 : 38.9) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (loc_os05g07220.1 : 38.5) no description available & (reliability: 77.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49881 PE=4 SV=1)'" P '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'tr|b7fqh4|b7fqh4_phatc' "'(gnl|cdd|38470 : 100.0) no description available & (at1g30070 : 56.2) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (loc_os01g55270.1 : 55.1) no description available & (gnl|cdd|29314 : 52.3) no description available & (reliability: 112.4) & (original description: Calcyclin-binding protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CacyBP PE=4 SV=1)'" P '29.5.11.4.3.3' 'protein.degradation.ubiquitin.E3.SCF.cullin' 'tr|b7g601|b7g601_phatc' "'(ipr001373 : 1500.0) Cullin, N-terminal & (loc_os05g05700.1 : 611.0) no description available & (at4g02570 : 603.0) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (chl4|517817 : 594.0) no description available & (gnl|cdd|37377 : 556.0) no description available & (gnl|cdd|35206 : 357.0) no description available & (reliability: 1206.0) & (original description: CULlin protein 1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CUL1_3 PE=3 SV=1)'" P '29.5.11.4.5.1' 'protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.Cullin3' 'tr|b7gcr0|b7gcr0_phatc' "'(gnl|cdd|47414 : 46.6) no description available & (at1g69670 : 35.8) cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.; cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50045 PE=4 SV=1)'" P '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'tr|b7g630|b7g630_phatc' "'(gnl|cdd|37083 : 282.0) no description available & (gnl|cdd|73063 : 277.0) no description available & (loc_os01g36930.1 : 266.0) no description available & (at1g51710 : 259.0) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.; ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 849; Plants - 654; Viruses - 2; Other Eukaryotes - 764 (source: NCBI BLink). & (chl4|517635 : 233.0) no description available & (ipr001394 : 93.4897) Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 & (reliability: 518.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29340 PE=3 SV=1)'" P '29.5.11.5' 'protein.degradation.ubiquitin.ubiquitin protease' 'tr|b7fns9|b7fns9_phatc' "'(gnl|cdd|84777 : 180.0) no description available & (chl4|519307 : 134.0) no description available & (gnl|cdd|37076 : 105.0) no description available & (ipr001394 : 94.31068) Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 & (at3g14400 : 74.7) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 25 (UBP25); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 8659 Blast hits to 7314 proteins in 254 species: Archae - 0; Bacteria - 9; Metazoa - 4447; Fungi - 1449; Plants - 1041; Viruses - 9; Other Eukaryotes - 1704 (source: NCBI BLink). & (loc_os05g43480.1 : 74.7) no description available & (reliability: 149.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42571 PE=3 SV=1)'" P '29.5.2' 'protein.degradation.autophagy' 'tr|b7gdm5|b7gdm5_phatc' '(gnl|cdd|29162 : 182.0) no description available & (gnl|cdd|36867 : 175.0) no description available & (loc_os08g09240.2 : 172.0) no description available & (chl4|516866 : 172.0) no description available & (at2g05630 : 169.0) in the Arabidopsis autophagy pathway; ATG8D; FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT1G62040.2); Has 1504 Blast hits to 1502 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 717; Fungi - 172; Plants - 303; Viruses - 3; Other Eukaryotes - 309 (source: NCBI BLink). & (ipr004241 : 104.37135) Autophagy protein Atg8 ubiquitin-like & (reliability: 336.0) & (original description: Autophagy-related protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50303 PE=3 SV=1)' P '29.5.3' 'protein.degradation.cysteine protease' 'tr|b7fsz7|b7fsz7_phatc' "'(gnl|cdd|36755 : 266.0) no description available & (gnl|cdd|84529 : 255.0) no description available & (at3g19390 : 245.0) Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 9061 Blast hits to 8168 proteins in 770 species: Archae - 67; Bacteria - 297; Metazoa - 4335; Fungi - 6; Plants - 1937; Viruses - 140; Other Eukaryotes - 2279 (source: NCBI BLink). & (loc_os01g73980.1 : 244.0) no description available & (p25251|cysp4_brana : 222.0) Cysteine proteinase COT44 precursor (EC 3.4.22.-) (Fragment) - Brassica napus (Rape) & (chl4|526247 : 222.0) no description available & (ipr000668 : 150.44456) Peptidase C1A, papain C-terminal & (reliability: 753.27795) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25433 PE=3 SV=1)'" P '29.5.3' 'protein.degradation.cysteine protease' 'tr|b7frh5|b7frh5_phatc' "'(gnl|cdd|35385 : 51.9) no description available & (gnl|cdd|32449 : 49.7) no description available & (p25776|orya_orysa : 41.2) Oryzain alpha chain precursor (EC 3.4.22.-) - Oryza sativa (Rice) & (at1g09850 : 40.4) Arabidopsis thaliana papain-like cysteine peptidase; xylem bark cysteine peptidase 3 (XBCP3); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT5G43060.1); Has 8836 Blast hits to 8016 proteins in 749 species: Archae - 59; Bacteria - 272; Metazoa - 4224; Fungi - 4; Plants - 1933; Viruses - 132; Other Eukaryotes - 2212 (source: NCBI BLink). & (loc_os09g39110.1 : 37.4) no description available & (reliability: 80.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42494 PE=4 SV=1)'" P '29.5.3' 'protein.degradation.cysteine protease' 'tr|b7fsd0|b7fsd0_phatc' "'(gnl|cdd|30296 : 244.0) no description available & (chl4|519409 : 146.0) no description available & (gnl|cdd|36756 : 123.0) no description available & (ipr000668 : 83.83467) Peptidase C1A, papain C-terminal & (at4g01610 : 76.3) Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, regulation of catalytic activity; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, cathepsin B (InterPro:IPR015643), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Peptidase C1A, propeptide (InterPro:IPR012599); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G02305.1); Has 7406 Blast hits to 7364 proteins in 687 species: Archae - 57; Bacteria - 153; Metazoa - 3244; Fungi - 4; Plants - 1710; Viruses - 146; Other Eukaryotes - 2092 (source: NCBI BLink). & (loc_os05g24550.1 : 70.9) no description available & (p25803|cysep_phavu : 69.3) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase) (Cysteine proteinase EP-C1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 299.31067) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4936 PE=3 SV=1)'" P '29.5.4' 'protein.degradation.aspartate protease' 'tr|b5y453|b5y453_phatc' "'(gnl|cdd|39225 : 110.0) no description available & (gnl|cdd|84320 : 68.5) no description available & (ipr016040 : 59.939785) NAD(P)-binding domain & (at1g77480 : 38.1) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1743 Blast hits to 1735 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1626; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (chl4|516619 : 35.8) no description available & (reliability: 76.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21181 PE=4 SV=1)'" P '29.5.4' 'protein.degradation.aspartate protease' 'tr|b7gbn2|b7gbn2_phatc' "'(gnl|cdd|84452 : 277.0) no description available & (ipr001461 : 212.0992) Peptidase A1 & (gnl|cdd|36553 : 189.0) no description available & (at4g04460 : 179.0) Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1). & (p42211|asprx_orysa : 176.0) Aspartic proteinase precursor (EC 3.4.23.-) - Oryza sativa (Rice) & (loc_os05g04630.6 : 176.0) no description available & (chl4|522210 : 175.0) no description available & (reliability: 729.1736) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16168 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|a0t0k8|a0t0k8_phatc' "'(gnl|cdd|79310 : 1099.0) no description available & (loc_os12g12850.2 : 829.0) no description available & (p35100|clpc_pea : 820.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (at5g50920 : 817.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36269 : 640.0) no description available & (chl4|518776 : 594.0) no description available & (ipr013093 : 118.18686) ATPase, AAA-2 & (reliability: 1634.0) & (original description: ATP-dependent clp protease ATP-binding subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=clpC PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7g512|b7g512_phatc' "'(gnl|cdd|79246 : 278.0) no description available & (gnl|cdd|36058 : 260.0) no description available & (p56317|clpp_chlvu : 256.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (at1g12410 : 204.0) Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; CLP protease proteolytic subunit 2 (CLP2); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: chloroplast organization; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: plastid-encoded CLP P (TAIR:ATCG00670.1); Has 13082 Blast hits to 13064 proteins in 2999 species: Archae - 2; Bacteria - 8275; Metazoa - 145; Fungi - 81; Plants - 1076; Viruses - 67; Other Eukaryotes - 3436 (source: NCBI BLink). & (loc_os06g04530.1 : 201.0) no description available & (chl4|512544 : 189.0) no description available & (ipr001907 : 173.68814) Peptidase S14, ClpP & (reliability: 711.9542) & (original description: ATP-dependent Clp protease proteolytic subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=clpP PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b5y4i2|b5y4i2_phatc' "'(gnl|cdd|84179 : 248.0) no description available & (gnl|cdd|36058 : 212.0) no description available & (at4g17040 : 201.0) CLP protease R subunit 4 (CLPR4); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plastid stroma, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT1G09130.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g51450.1 : 166.0) no description available & (chl4|521590 : 135.0) no description available & (p56317|clpp_chlvu : 106.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (ipr001907 : 96.9443) Peptidase S14, ClpP & (reliability: 571.6525) & (original description: ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10593 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b5y4z9|b5y4z9_phatc' "'(gnl|cdd|81467 : 573.0) no description available & (chl4|513078 : 371.0) no description available & (gnl|cdd|35964 : 117.0) no description available & (at1g33360 : 96.3) Encodes ClpX3, a subunit of the Clp protease complex.; ATP-dependent Clp protease; FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: CLP protease regulatory subunit X (TAIR:AT5G53350.1); Has 27211 Blast hits to 23373 proteins in 3012 species: Archae - 715; Bacteria - 14972; Metazoa - 1896; Fungi - 1201; Plants - 919; Viruses - 6; Other Eukaryotes - 7502 (source: NCBI BLink). & (loc_os05g45750.1 : 89.0) no description available & (ipr013093 : 70.281525) ATPase, AAA-2 & (o82150|ftsh_tobac : 38.5) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 192.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_41790 PE=4 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b5y3e3|b5y3e3_phatc' "'(gnl|cdd|31136 : 258.0) no description available & (at4g17740 : 224.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: thylakoid, thylakoid lumen, mitochondrion, chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT3G57680.1); Has 9160 Blast hits to 9150 proteins in 1973 species: Archae - 0; Bacteria - 5658; Metazoa - 14; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3335 (source: NCBI BLink). & (loc_os06g21380.1 : 196.0) no description available & (chl4|509626 : 193.0) no description available & (ipr005151 : 87.85491) Peptidase S41 & (reliability: 601.7461) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46670 PE=4 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7fv16|b7fv16_phatc' "'(gnl|cdd|84781 : 363.0) no description available & (gnl|cdd|36496 : 307.0) no description available & (p37891|cbp3_orysa : 278.0) Serine carboxypeptidase 3 precursor (EC 3.4.16.5) (Serine carboxypeptidase III) - Oryza sativa (Rice) & (loc_os07g29620.1 : 278.0) no description available & (at3g10410 : 265.0) SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). & (ipr001563 : 258.48737) Peptidase S10, serine carboxypeptidase & (chl4|523459 : 243.0) no description available & (reliability: 982.3529) & (original description: Carboxypeptidase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11204 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7gcv2|b7gcv2_phatc' "'(gnl|cdd|30888 : 714.0) no description available & (loc_os04g32560.2 : 451.0) no description available & (at5g50920 : 446.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 441.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (gnl|cdd|36269 : 264.0) no description available & (chl4|518776 : 246.0) no description available & (ipr013093 : 106.5351) ATPase, AAA-2 & (reliability: 892.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16455 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'sp|b7fsl4|lonm_phatc' "'(gnl|cdd|37215 : 909.0) no description available & (gnl|cdd|30814 : 884.0) no description available & (at5g26860 : 745.0) Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.; lon protease 1 (LON1); FUNCTIONS IN: serine-type peptidase activity, protein binding, ATP-dependent peptidase activity, ATP binding; INVOLVED IN: proteolysis; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Peptidase S16, active site (InterPro:IPR008268), Peptidase S16, ATP-dependent protease La (InterPro:IPR004815), Peptidase S16, lon N-terminal (InterPro:IPR003111), Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: lon protease 4 (TAIR:AT3G05790.1); Has 18238 Blast hits to 18056 proteins in 2534 species: Archae - 547; Bacteria - 9804; Metazoa - 746; Fungi - 600; Plants - 445; Viruses - 7; Other Eukaryotes - 6089 (source: NCBI BLink). & (p93648|lonh2_maize : 741.0) Lon protease homolog 2, mitochondrial precursor (EC 3.4.21.-) - Zea mays (Maize) & (loc_os07g48960.1 : 726.0) no description available & (chl4|523502 : 533.0) no description available & (ipr008269 : 158.61601) Peptidase S16, Lon C-terminal & (reliability: 1767.578) & (original description: Lon protease homolog, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18202 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7g947|b7g947_phatc' "'(gnl|cdd|36496 : 297.0) no description available & (gnl|cdd|84781 : 290.0) no description available & (ipr001563 : 193.15479) Peptidase S10, serine carboxypeptidase & (at4g12910 : 184.0) serine carboxypeptidase-like 20 (scpl20); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 21 (TAIR:AT3G25420.1); Has 4118 Blast hits to 3857 proteins in 425 species: Archae - 0; Bacteria - 294; Metazoa - 699; Fungi - 932; Plants - 1620; Viruses - 0; Other Eukaryotes - 573 (source: NCBI BLink). & (p52711|cbp23_horvu : 180.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (loc_os04g25560.1 : 176.0) no description available & (chl4|518342 : 129.0) no description available & (reliability: 706.0209) & (original description: Carboxypeptidase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22901 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7fxc9|b7fxc9_phatc' "'(gnl|cdd|36330 : 1001.0) no description available & (loc_os02g44520.1 : 765.0) no description available & (at4g20850 : 741.0) Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.; tripeptidyl peptidase ii (TPP2); FUNCTIONS IN: tripeptidyl-peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8A, tripeptidyl peptidase II (InterPro:IPR022229); Has 6394 Blast hits to 6195 proteins in 1270 species: Archae - 226; Bacteria - 4362; Metazoa - 666; Fungi - 272; Plants - 126; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (chl4|516559 : 569.0) no description available & (ipr000209 : 149.4857) Peptidase S8/S53, subtilisin/kexin/sedolisin & (gnl|cdd|84501 : 144.0) no description available & (reliability: 1482.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26948 PE=4 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7ftx1|b7ftx1_phatc' "'(gnl|cdd|80601 : 292.0) no description available & (gnl|cdd|36058 : 253.0) no description available & (loc_os03g19510.1 : 221.0) no description available & (chl4|512544 : 218.0) no description available & (at1g02560 : 213.0) One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).; nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). & (ipr001907 : 170.29599) Peptidase S14, ClpP & (p56317|clpp_chlvu : 170.0) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) - Chlorella vulgaris (Green alga) & (reliability: 724.01794) & (original description: ATP-dependent Clp protease proteolytic subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44382 PE=3 SV=1)'" P '29.5.5' 'protein.degradation.serine protease' 'tr|b7fw25|b7fw25_phatc' "'(gnl|cdd|29152 : 197.0) no description available & (gnl|cdd|38833 : 162.0) no description available & (ipr001254 : 104.270256) Peptidase S1/S6, chymotrypsin/Hap & (chl4|517953 : 77.8) no description available & (reliability: 182.47295) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54319 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|a0t0f2|a0t0f2_phatc' "'(gnl|cdd|30813 : 607.0) no description available & (at2g30950 : 606.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (chl4|517510 : 601.0) no description available & (loc_os06g45820.1 : 589.0) no description available & (gnl|cdd|35950 : 552.0) no description available & (q5z974|ftsh_orysa : 441.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (ipr000642 : 163.30122) Peptidase M41 & (reliability: 1212.0) & (original description: ATP-dependent zinc metalloprotease FtsH OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ftsH PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7gca0|b7gca0_phatc' "'(gnl|cdd|35950 : 623.0) no description available & (loc_os05g38400.1 : 579.0) no description available & (at2g29080 : 577.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (gnl|cdd|30813 : 557.0) no description available & (chl4|511014 : 520.0) no description available & (q5z974|ftsh_orysa : 375.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (ipr000642 : 139.58221) Peptidase M41 & (reliability: 1122.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16391 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7fnv9|b7fnv9_phatc' "'(gnl|cdd|37986 : 524.0) no description available & (loc_os12g43370.2 : 473.0) no description available & (at3g59990 : 466.0) Encodes a MAP2 like methionine aminopeptidase; methionine aminopeptidase 2B (MAP2B); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: protein processing; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24A, methionine aminopeptidase, subfamily 2 (InterPro:IPR002468), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site (InterPro:IPR018349), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 2A (TAIR:AT2G44180.1). & (chl4|516065 : 463.0) no description available & (gnl|cdd|29973 : 404.0) no description available & (ipr000994 : 215.0567) Peptidase M24, structural domain & (reliability: 1308.3492) & (original description: Methionine aminopeptidase 2 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17304 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7fpi1|b7fpi1_phatc' "'(gnl|cdd|30813 : 618.0) no description available & (q39444|ftsh_capan : 592.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (loc_os06g51029.1 : 591.0) no description available & (chl4|512538 : 588.0) no description available & (at1g50250 : 585.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (gnl|cdd|35950 : 541.0) no description available & (ipr000642 : 157.68445) Peptidase M41 & (reliability: 1170.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17504 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7ft30|b7ft30_phatc' "'(gnl|cdd|36177 : 637.0) no description available & (gnl|cdd|31228 : 568.0) no description available & (at2g41790 : 482.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (loc_os07g38260.1 : 451.0) no description available & (chl4|520344 : 290.0) no description available & (ipr011237 : 172.43152) Peptidase M16, core & (reliability: 964.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18335 PE=4 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7fte4|b7fte4_phatc' "'(gnl|cdd|37487 : 601.0) no description available & (gnl|cdd|76477 : 303.0) no description available & (chl4|512779 : 225.0) no description available & (ipr002933 : 58.144447) Peptidase M20 & (loc_os02g46520.1 : 38.1) no description available & (at1g44820 : 37.7) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, aminoacylase activity; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44180.1); Has 5585 Blast hits to 5583 proteins in 1537 species: Archae - 130; Bacteria - 3721; Metazoa - 430; Fungi - 258; Plants - 102; Viruses - 2; Other Eukaryotes - 942 (source: NCBI BLink). & (reliability: 101.752785) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18404 PE=4 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7fsd7|b7fsd7_phatc' "'(at3g19170 : 875.0) Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers; presequence protease 1 (PREP1); CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2). & (loc_os02g52390.1 : 852.0) no description available & (gnl|cdd|37230 : 756.0) no description available & (gnl|cdd|31229 : 686.0) no description available & (chl4|511037 : 525.0) no description available & (ipr013578 : 112.238884) Peptidase M16C associated & (reliability: 1811.5873) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_232 PE=4 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7gch1|b7gch1_phatc' "'(gnl|cdd|35950 : 645.0) no description available & (loc_os05g38400.1 : 618.0) no description available & (at1g07510 : 608.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|30813 : 553.0) no description available & (chl4|511014 : 534.0) no description available & (q5z974|ftsh_orysa : 387.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (ipr000642 : 140.82875) Peptidase M41 & (reliability: 1216.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23646 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7gem5|b7gem5_phatc' "'(gnl|cdd|36177 : 709.0) no description available & (gnl|cdd|31228 : 569.0) no description available & (loc_os01g57073.1 : 482.0) no description available & (at2g41790 : 472.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (chl4|520344 : 384.0) no description available & (ipr011237 : 178.40771) Peptidase M16, core & (reliability: 1014.1054) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50598 PE=4 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|b7s4c8|b7s4c8_phatc' "'(gnl|cdd|37949 : 422.0) no description available & (gnl|cdd|29971 : 359.0) no description available & (loc_os10g36470.2 : 341.0) no description available & (at2g45240 : 338.0) Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.; methionine aminopeptidase 1A (MAP1A); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity, zinc ion binding; INVOLVED IN: protein processing, N-terminal protein amino acid modification; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 18085 Blast hits to 18064 proteins in 2832 species: Archae - 403; Bacteria - 12111; Metazoa - 396; Fungi - 241; Plants - 256; Viruses - 0; Other Eukaryotes - 4678 (source: NCBI BLink). & (chl4|523468 : 333.0) no description available & (ipr000994 : 230.07619) Peptidase M24, structural domain & (reliability: 1078.6333) & (original description: Methionine aminopeptidase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd561 PE=3 SV=1)'" P '29.5.7' 'protein.degradation.metalloprotease' 'tr|a0t0g7|a0t0g7_phatc' "'(gnl|cdd|30812 : 182.0) no description available & (gnl|cdd|35949 : 134.0) no description available & (loc_os08g31870.1 : 112.0) no description available & (at3g53230 : 107.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 107.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (chl4|517510 : 107.0) no description available & (ipr003959 : 60.758812) ATPase, AAA-type, core & (reliability: 194.8) & (original description: Uncharacterized protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf46 PE=4 SV=1)'" P '29.5.9' 'protein.degradation.AAA type' 'tr|b7g0l9|b7g0l9_phatc' "'(gnl|cdd|35960 : 674.0) no description available & (at4g04910 : 551.0) N-ethylmaleimide sensitive factor; N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink). & (chl4|510475 : 550.0) no description available & (loc_os05g44310.1 : 525.0) no description available & (gnl|cdd|30812 : 188.0) no description available & (q96372|cdc48_capan : 147.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (ipr003959 : 80.838936) ATPase, AAA-type, core & (reliability: 1102.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12620 PE=3 SV=1)'" P '29.5.9' 'protein.degradation.AAA type' 'tr|b7gca0|b7gca0_phatc' "'(gnl|cdd|35950 : 623.0) no description available & (loc_os05g38400.1 : 579.0) no description available & (at2g29080 : 577.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (gnl|cdd|30813 : 557.0) no description available & (chl4|511014 : 520.0) no description available & (q5z974|ftsh_orysa : 375.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (ipr000642 : 139.58221) Peptidase M41 & (reliability: 1154.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16391 PE=3 SV=1)'" P '29.5.9' 'protein.degradation.AAA type' 'tr|b7gch1|b7gch1_phatc' "'(gnl|cdd|35950 : 645.0) no description available & (loc_os05g38400.1 : 618.0) no description available & (at1g07510 : 608.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (gnl|cdd|30813 : 553.0) no description available & (chl4|511014 : 534.0) no description available & (q5z974|ftsh_orysa : 387.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (ipr000642 : 140.82875) Peptidase M41 & (reliability: 1186.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23646 PE=3 SV=1)'" P '29.5.9' 'protein.degradation.AAA type' 'tr|b7gcy6|b7gcy6_phatc' "'(gnl|cdd|35958 : 506.0) no description available & (at2g27600 : 408.0) Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.; SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: vesicle-mediated transport, endosome organization; LOCATED IN: cytoplasm, multivesicular body; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G80350.1); Has 30691 Blast hits to 28172 proteins in 3117 species: Archae - 1476; Bacteria - 10868; Metazoa - 5113; Fungi - 3519; Plants - 2854; Viruses - 27; Other Eukaryotes - 6834 (source: NCBI BLink). & (loc_os01g04814.1 : 394.0) no description available & (chl4|518537 : 378.0) no description available & (gnl|cdd|30812 : 231.0) no description available & (q96372|cdc48_capan : 160.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (ipr003959 : 84.553795) ATPase, AAA-type, core & (reliability: 816.0) & (original description: Vacuolar protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30898 PE=3 SV=1)'" P '29.5.9' 'protein.degradation.AAA type' 'tr|b7fu93|b7fu93_phatc' "'(gnl|cdd|35961 : 488.0) no description available & (at3g03060 : 310.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT5G16930.1); Has 38046 Blast hits to 31515 proteins in 3061 species: Archae - 1414; Bacteria - 11706; Metazoa - 8052; Fungi - 4459; Plants - 2737; Viruses - 110; Other Eukaryotes - 9568 (source: NCBI BLink). & (loc_os02g46990.1 : 301.0) no description available & (chl4|511823 : 292.0) no description available & (ipr021911 : 166.03459) ATPase family AAA domain-containing protein 3, domain of unknown function DUF3523 & (gnl|cdd|84432 : 101.0) no description available & (p46465|prs6a_orysa : 74.3) 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) - Oryza sativa (Rice) & (reliability: 604.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44478 PE=4 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fq72|b7fq72_phatc' "'(gnl|cdd|48161 : 771.0) no description available & (gnl|cdd|35577 : 634.0) no description available & (chl4|524078 : 620.0) no description available & (p29185|ch61_maize : 619.0) Chaperonin CPN60-1, mitochondrial precursor (HSP60-1) - Zea mays (Maize) & (loc_os10g32550.1 : 619.0) no description available & (at2g33210 : 615.0) heat shock protein 60-2 (HSP60-2); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1). & (ipr002423 : 261.90692) Chaperonin Cpn60/TCP-1 & (reliability: 1688.3372) & (original description: Mitochondria-targeted chaperonin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CPN60_1 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7frs0|b7frs0_phatc' "'(gnl|cdd|48161 : 631.0) no description available & (gnl|cdd|35577 : 477.0) no description available & (chl4|521778 : 454.0) no description available & (p08926|ruba_pea : 452.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) - Pisum sativum (Garden pea) & (at2g28000 : 445.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (loc_os12g17910.1 : 438.0) no description available & (ipr002423 : 235.0744) Chaperonin Cpn60/TCP-1 & (reliability: 1279.3801) & (original description: Nuclear-encoded-like protein of chloroplast gro OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CPN60_2 PE=3 SV=1)'" P '29.6' 'protein.folding' 'sp|a0t0h6|ch60_phatc' "'(gnl|cdd|79308 : 835.0) no description available & (gnl|cdd|35577 : 525.0) no description available & (p21239|rub1_brana : 514.0) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) - Brassica napus (Rape) & (at2g28000 : 510.0) Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.; chaperonin-60alpha (CPN60A); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, chloroplast organization, embryo development; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G18820.1); Has 33896 Blast hits to 33887 proteins in 8716 species: Archae - 792; Bacteria - 21835; Metazoa - 1656; Fungi - 1573; Plants - 797; Viruses - 2; Other Eukaryotes - 7241 (source: NCBI BLink). & (chl4|521778 : 508.0) no description available & (loc_os02g01280.1 : 497.0) no description available & (ipr002423 : 268.52698) Chaperonin Cpn60/TCP-1 & (reliability: 1447.9222) & (original description: 60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=groL PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g3y2|b7g3y2_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (gnl|cdd|35323 : 862.0) no description available & (gnl|cdd|84440 : 819.0) no description available & (at5g02500 : 725.0) encodes a member of heat shock protein 70 family.; heat shock cognate protein 70-1 (HSC70-1); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cold, response to virus, response to heat; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G02490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g38530.1 : 722.0) no description available & (q03685|bip5_tobac : 721.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (chl4|518564 : 702.0) no description available & (reliability: 1450.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Hsp70_2 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fq84|b7fq84_phatc' "'(ipr013126 : 1500.0) Heat shock protein 70 family & (loc_os03g16920.1 : 883.0) no description available & (gnl|cdd|84440 : 881.0) no description available & (at3g12580 : 869.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p26413|hsp70_soybn : 867.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (gnl|cdd|35323 : 863.0) no description available & (chl4|525480 : 833.0) no description available & (reliability: 1736.0) & (original description: Protein heat shock protein Hsp70 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=HSP70A PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b5y3s9|b5y3s9_phatc' "'(at5g20720 : 116.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (loc_os06g09679.2 : 115.0) no description available & (ipr020818 : 108.60716) Chaperonin Cpn10 & (q02073|ch10c_spiol : 108.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (chl4|520331 : 105.0) no description available & (gnl|cdd|73192 : 85.9) no description available & (gnl|cdd|36854 : 62.6) no description available & (reliability: 232.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46791 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fu48|b7fu48_phatc' "'(o49939|tlp40_spiol : 250.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) - Spinacia oleracea (Spinach) & (loc_os08g29370.2 : 248.0) no description available & (at3g01480 : 242.0) Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.; cyclophilin 38 (CYP38); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, photosystem II assembly, photosystem II stabilization, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G15520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|521275 : 235.0) no description available & (gnl|cdd|29395 : 199.0) no description available & (gnl|cdd|35636 : 50.4) no description available & (ipr002130 : 46.765053) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 484.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11022 PE=4 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fxm5|b7fxm5_phatc' "'(gnl|cdd|73192 : 108.0) no description available & (loc_os03g25050.1 : 92.0) no description available & (gnl|cdd|36854 : 91.9) no description available & (at1g14980 : 87.4) Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.; chaperonin 10 (CPN10); FUNCTIONS IN: copper ion binding, chaperone binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: GroES-like family protein (TAIR:AT1G23100.1); Has 9195 Blast hits to 9085 proteins in 2839 species: Archae - 7; Bacteria - 6160; Metazoa - 328; Fungi - 119; Plants - 343; Viruses - 2; Other Eukaryotes - 2236 (source: NCBI BLink). & (q96539|ch10_brana : 83.2) 10 kDa chaperonin (Protein CPN10) (Protein groES) - Brassica napus (Rape) & (ipr020818 : 76.97956) Chaperonin Cpn10 & (chl4|520331 : 59.3) no description available & (reliability: 174.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12004 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fwt8|b7fwt8_phatc' "'(gnl|cdd|30891 : 135.0) no description available & (gnl|cdd|35769 : 127.0) no description available & (loc_os08g41390.1 : 85.1) no description available & (at3g25230 : 82.8) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|516564 : 82.0) no description available & (q43207|fkb70_wheat : 73.9) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (ipr001179 : 63.884598) Peptidyl-prolyl cis-trans isomerase, FKBP-type & (reliability: 277.39807) & (original description: Peptidylprolyl isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19690 PE=4 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g2t8|b7g2t8_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|48156 : 850.0) no description available & (at1g24510 : 656.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, epsilon subunit (InterPro:IPR012718), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os06g36700.1 : 655.0) no description available & (chl4|520572 : 645.0) no description available & (p54411|tcpe2_avesa : 634.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (gnl|cdd|35578 : 407.0) no description available & (reliability: 3177.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21430 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g4d0|b7g4d0_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|73351 : 731.0) no description available & (gnl|cdd|35585 : 656.0) no description available & (chl4|510098 : 634.0) no description available & (at5g26360 : 590.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, gamma subunit (InterPro:IPR012719), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os06g34690.1 : 589.0) no description available & (p54411|tcpe2_avesa : 266.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 3805.0) & (original description: T-complex protein 1 subunit gamma OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21789 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g853|b7g853_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|73353 : 644.0) no description available & (gnl|cdd|35580 : 576.0) no description available & (loc_os05g05470.1 : 521.0) no description available & (at5g16070 : 509.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G02530.1); Has 18279 Blast hits to 17892 proteins in 3676 species: Archae - 807; Bacteria - 8603; Metazoa - 2077; Fungi - 1456; Plants - 829; Viruses - 0; Other Eukaryotes - 4507 (source: NCBI BLink). & (chl4|526031 : 489.0) no description available & (p40412|tcpe1_avesa : 171.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 3643.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22666 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fxh5|b7fxh5_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|48152 : 772.0) no description available & (chl4|510007 : 610.0) no description available & (gnl|cdd|35581 : 604.0) no description available & (loc_os04g46620.1 : 592.0) no description available & (at3g20050 : 590.0) Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).; T-complex protein 1 alpha subunit (TCP-1); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, alpha subunit (InterPro:IPR012715); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 17155 Blast hits to 17114 proteins in 3594 species: Archae - 808; Bacteria - 7960; Metazoa - 2159; Fungi - 1408; Plants - 801; Viruses - 0; Other Eukaryotes - 4019 (source: NCBI BLink). & (p54411|tcpe2_avesa : 223.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 3805.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26980 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7gb02|b7gb02_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|48155 : 744.0) no description available & (gnl|cdd|35579 : 673.0) no description available & (chl4|520187 : 587.0) no description available & (at3g18190 : 537.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, delta subunit (InterPro:IPR012717); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT1G24510.1); Has 19273 Blast hits to 19203 proteins in 3973 species: Archae - 808; Bacteria - 9512; Metazoa - 2051; Fungi - 1477; Plants - 841; Viruses - 2; Other Eukaryotes - 4582 (source: NCBI BLink). & (loc_os02g22780.1 : 520.0) no description available & (p54411|tcpe2_avesa : 278.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 3699.0) & (original description: T-complex protein 1 subunit delta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30446 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g279|b7g279_phatc' "'(ipr002423 : 1500.0) Chaperonin Cpn60/TCP-1 & (gnl|cdd|48157 : 817.0) no description available & (gnl|cdd|35582 : 727.0) no description available & (chl4|511155 : 638.0) no description available & (at3g11830 : 621.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (loc_os06g47320.1 : 619.0) no description available & (p54411|tcpe2_avesa : 208.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 3867.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37131 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7gcw2|b7gcw2_phatc' "'(gnl|cdd|73352 : 522.0) no description available & (gnl|cdd|35583 : 487.0) no description available & (loc_os03g59020.1 : 393.0) no description available & (at3g03960 : 380.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin TCP-1, conserved site (InterPro:IPR002194), T-complex protein 1, theta subunit (InterPro:IPR012721); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G18190.1); Has 15495 Blast hits to 15419 proteins in 3442 species: Archae - 801; Bacteria - 7598; Metazoa - 1836; Fungi - 1369; Plants - 680; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink). & (chl4|520822 : 374.0) no description available & (ipr002423 : 269.40247) Chaperonin Cpn60/TCP-1 & (p54411|tcpe2_avesa : 161.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1231.4543) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40956 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7g9j0|b7g9j0_phatc' "'(gnl|cdd|48153 : 811.0) no description available & (gnl|cdd|35584 : 735.0) no description available & (loc_os03g42220.1 : 611.0) no description available & (chl4|526436 : 604.0) no description available & (at5g20890 : 588.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (ipr002423 : 296.07797) Chaperonin Cpn60/TCP-1 & (p54411|tcpe2_avesa : 230.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1694.1365) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49114 PE=3 SV=1)'" P '29.6' 'protein.folding' 'tr|b7fpt3|b7fpt3_phatc' "'(gnl|cdd|30891 : 150.0) no description available & (chl4|516563 : 105.0) no description available & (gnl|cdd|35769 : 100.0) no description available & (loc_os01g68710.2 : 85.1) no description available & (at3g25230 : 82.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41649|fkb15_vicfa : 79.3) FK506-binding protein 2 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15) - Vicia faba (Broad bean) & (ipr001179 : 45.95639) Peptidyl-prolyl cis-trans isomerase, FKBP-type & (reliability: 244.42368) & (original description: Peptidylprolyl isomerase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9400 PE=4 SV=1)'" P '29.6' 'protein.folding' 'tr|b7s404|b7s404_phatc' "'(gnl|cdd|80879 : 188.0) no description available & (at5g55220 : 110.0) trigger factor type chaperone family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, C-terminal, bacterial (InterPro:IPR008880), Trigger factor (InterPro:IPR005215), Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g20320.1 : 110.0) no description available & (chl4|510638 : 60.8) no description available & (ipr008880 : 53.145786) Trigger factor, C-terminal, bacterial & (gnl|cdd|35385 : 36.9) no description available & (reliability: 313.00513) & (original description: Peptidylprolyl isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1648 PE=3 SV=1)'" P '29.7' 'protein.glycosylation' 'tr|b7g3j4|b7g3j4_phatc' "'(ipr011990 : 171.66426) Tetratricopeptide-like helical & (gnl|cdd|35767 : 164.0) no description available & (at3g04240 : 64.3) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (gnl|cdd|29151 : 60.1) no description available & (loc_os02g43020.1 : 55.8) no description available & (q43468|stip_soybn : 51.2) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (chl4|518870 : 44.3) no description available & (reliability: 128.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47492 PE=4 SV=1)'" P '29.8' 'protein.assembly and cofactor ligation' 'tr|b7gdj5|b7gdj5_phatc' "'(loc_os05g06330.1 : 176.0) no description available & (at1g51390 : 174.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU4 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 5 (NFU5); FUNCTIONS IN: structural molecule activity, copper ion binding, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 4 (TAIR:AT3G20970.1); Has 5960 Blast hits to 5916 proteins in 1563 species: Archae - 16; Bacteria - 3044; Metazoa - 168; Fungi - 162; Plants - 181; Viruses - 3; Other Eukaryotes - 2386 (source: NCBI BLink). & (chl4|512932 : 173.0) no description available & (gnl|cdd|37569 : 153.0) no description available & (gnl|cdd|31038 : 95.8) no description available & (ipr014824 : 55.07972) NIF system FeS cluster assembly, NifU-like scaffold, N-terminal & (q84lk7|nifu1_orysa : 53.5) NifU-like protein 1, chloroplast precursor (OsNifu1) - Oryza sativa (Rice) & (reliability: 420.53143) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16693 PE=4 SV=1)'" P '29.8' 'protein.assembly and cofactor ligation' 'tr|b7g3a6|b7g3a6_phatc' "'(chl4|523339 : 306.0) no description available & (at5g23120 : 295.0) encodes a stability and/or assembly factor of photosystem II; HIGH CHLOROPHYLL FLUORESCENCE 136 (HCF136); INVOLVED IN: response to cadmium ion, plastid organization, protein complex assembly; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BNR repeat (InterPro:IPR002860), Photosystem II stability/assembly factor, HCF136 (InterPro:IPR016705), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5z5a8|p2saf_orysa : 295.0) Photosystem II stability/assembly factor HCF136, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|34127 : 189.0) no description available & (gnl|cdd|38720 : 81.2) no description available & (reliability: 590.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47413 PE=4 SV=1)'" P '29.8' 'protein.assembly and cofactor ligation' 'tr|a0t0e4|a0t0e4_phatc' "'(gnl|cdd|83989 : 851.0) no description available & (chl4|515881 : 684.0) no description available & (at4g04770 : 650.0) Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.; ATP binding cassette protein 1 (ABC1); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: cellular iron ion homeostasis, regulation of response to red or far red light, iron-sulfur cluster assembly; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufB (InterPro:IPR010231), SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD superfamily protein (TAIR:AT5G44316.1); Has 12037 Blast hits to 11965 proteins in 1962 species: Archae - 330; Bacteria - 6550; Metazoa - 4; Fungi - 1; Plants - 99; Viruses - 0; Other Eukaryotes - 5053 (source: NCBI BLink). & (loc_os01g61400.1 : 645.0) no description available & (ipr000825 : 126.05439) SUF system FeS cluster assembly, SufBD & (reliability: 1300.0) & (original description: Iron-sulfur cluster formation ABC transporter OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=sufB PE=4 SV=1)'" P '29.8' 'protein.assembly and cofactor ligation' 'tr|a0t0e5|a0t0e5_phatc' "'(gnl|cdd|79343 : 395.0) no description available & (at3g10670 : 301.0) Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe??S clusters. Expressed in embryos and meristems.; non-intrinsic ABC protein 7 (NAP7); FUNCTIONS IN: protein binding, ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: iron-sulfur cluster assembly, thylakoid membrane organization, embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase SufC, SUF system FeS cluster assembly (InterPro:IPR010230), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 256475 Blast hits to 243565 proteins in 3618 species: Archae - 5159; Bacteria - 209774; Metazoa - 3736; Fungi - 3348; Plants - 2780; Viruses - 4; Other Eukaryotes - 31674 (source: NCBI BLink). & (chl4|524763 : 298.0) no description available & (loc_os03g21490.2 : 271.0) no description available & (gnl|cdd|35278 : 93.7) no description available & (q9g4f5|cysa_cucsa : 57.4) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (reliability: 602.0) & (original description: Iron-sulfur cluster formation ABC transporter ATP-binding subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=sufC PE=4 SV=1)'" P '29.8' 'protein.assembly and cofactor ligation' 'sp|a0t0a2|ycf4_phatc' "'(gnl|cdd|79254 : 238.0) no description available & (ipr003359 : 165.31612) Photosystem I Ycf4, assembly & (q9tkz3|ycf4_nepol : 155.0) Photosystem I assembly protein ycf4 (RF4) - Nephroselmis olivacea & (atcg00520 : 115.0) Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth.; YCF4; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: photosystem I assembly; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I assembly protein Ycf4 (InterPro:IPR003359). & (loc_osp1g00460.1 : 106.0) no description available & (reliability: 230.0) & (original description: Photosystem I assembly protein Ycf4 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf4 PE=3 SV=1)'" P '3.2.1' 'minor CHO metabolism.trehalose.TPS' 'tr|b7g068|b7g068_phatc' "'(loc_os09g23350.1 : 459.0) no description available & (at4g17770 : 449.0) Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.; trehalose phosphatase/synthase 5 (TPS5); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase / trehalose-phosphatase family protein (TAIR:AT1G68020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36268 : 444.0) no description available & (gnl|cdd|85165 : 381.0) no description available & (ipr001830 : 227.12302) Glycosyl transferase, family 20 & (chl4|516285 : 172.0) no description available & (reliability: 1089.4653) & (original description: Bifunctional trehalose-6-phosphate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TPS1 PE=4 SV=1)'" P '3.4.3' 'minor CHO metabolism.myo-inositol.InsP Synthases' 'tr|b7fwi9|b7fwi9_phatc' "'(gnl|cdd|35912 : 783.0) no description available & (at4g39800 : 625.0) ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.; myo-inositol-1-phosphate synthase 1 (MIPS1); CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 2 (TAIR:AT2G22240.1); Has 1863 Blast hits to 1859 proteins in 511 species: Archae - 107; Bacteria - 438; Metazoa - 126; Fungi - 158; Plants - 764; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink). & (chl4|521070 : 625.0) no description available & (q9s7u0|ino1_wheat : 623.0) Inositol-3-phosphate synthase (EC 5.5.1.4) (Myo-inositol-1-phosphate synthase) (MI-1-P synthase) (IPS) - Triticum aestivum (Wheat) & (loc_os03g09250.1 : 621.0) no description available & (gnl|cdd|87426 : 489.0) no description available & (ipr002587 : 240.28983) Myo-inositol-1-phosphate synthase & (reliability: 1670.5072) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45120 PE=4 SV=1)'" P '3.4.5' 'minor CHO metabolism.myo-inositol.inositol phosphatase' 'tr|b7ft16|b7ft16_phatc' "'(gnl|cdd|30137 : 257.0) no description available & (gnl|cdd|38162 : 212.0) no description available & (loc_os03g39000.2 : 164.0) no description available & (o49071|impp_mescr : 157.0) Inositol monophosphatase (EC 3.1.3.25) (IMPase) (IMP) (Inositol-1(or 4)-monophosphatase) - Mesembryanthemum crystallinum (Common ice plant) & (at3g02870 : 155.0) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr000760 : 145.27357) Inositol monophosphatase & (chl4|514920 : 137.0) no description available & (reliability: 564.22876) & (original description: Inositol-1-monophosphatase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18323 PE=3 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7fqx6|b7fqx6_phatc' "'(gnl|cdd|36807 : 190.0) no description available & (chl4|516609 : 179.0) no description available & (loc_os09g15820.1 : 177.0) no description available & (at5g66530 : 166.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1). & (ipr014718 : 132.59442) Glycoside hydrolase-type carbohydrate-binding, subgroup & (gnl|cdd|31020 : 112.0) no description available & (reliability: 437.84595) & (original description: Glucose-6-phosphate 1-epimerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17895 PE=3 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7gdy8|b7gdy8_phatc' "'(loc_os11g29370.1 : 303.0) no description available & (at5g53850 : 291.0) haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: hydrolase activity, ion binding, methylthioribulose 1-phosphate dehydratase activity, metal ion binding; INVOLVED IN: L-methionine salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class II aldolase/adducin, N-terminal (InterPro:IPR001303), Methylthioribulose-1-phosphate dehydratase (InterPro:IPR017714); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37842 : 232.0) no description available & (gnl|cdd|33954 : 189.0) no description available & (ipr001303 : 126.54687) Class II aldolase/adducin N-terminal & (reliability: 582.0) & (original description: Probable methylthioribulose-1-phosphate dehydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31147 PE=3 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7ga17|b7ga17_phatc' "'(gnl|cdd|36807 : 185.0) no description available & (gnl|cdd|31020 : 147.0) no description available & (ipr014718 : 135.15938) Glycoside hydrolase-type carbohydrate-binding, subgroup & (chl4|524919 : 125.0) no description available & (loc_os01g46950.1 : 123.0) no description available & (at4g23730 : 116.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 2244 Blast hits to 2241 proteins in 942 species: Archae - 0; Bacteria - 1605; Metazoa - 39; Fungi - 135; Plants - 255; Viruses - 0; Other Eukaryotes - 210 (source: NCBI BLink). & (reliability: 318.26782) & (original description: Glucose-6-phosphate 1-epimerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39942 PE=3 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7g8u4|b7g8u4_phatc' "'(chl4|510488 : 342.0) no description available & (loc_os03g41510.2 : 334.0) no description available & (at1g04420 : 313.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|83360 : 266.0) no description available & (gnl|cdd|36788 : 237.0) no description available & (ipr023210 : 216.98773) NADP-dependent oxidoreductase domain & (q40648|kcab_orysa : 123.0) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 626.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42255 PE=4 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7fpc8|b7fpc8_phatc' "'(gnl|cdd|36790 : 118.0) no description available & (gnl|cdd|31001 : 116.0) no description available & (ipr023210 : 107.95914) NADP-dependent oxidoreductase domain & (at2g37770 : 74.3) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g38230.2 : 70.9) no description available & (chl4|519640 : 69.3) no description available & (p23901|aldr_horvu : 64.7) Aldose reductase (EC 1.1.1.21) (AR) (Aldehyde reductase) - Hordeum vulgare (Barley) & (reliability: 148.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42736 PE=4 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7fq57|b7fq57_phatc' "'(gnl|cdd|37637 : 442.0) no description available & (loc_os03g51000.2 : 356.0) no description available & (at3g17770 : 340.0) Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT1G48430.1); Has 5081 Blast hits to 5076 proteins in 1119 species: Archae - 14; Bacteria - 4130; Metazoa - 96; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). & (gnl|cdd|86078 : 292.0) no description available & (chl4|515110 : 225.0) no description available & (ipr004006 : 224.49019) Dak kinase & (o49227|dhbk_soybn : 41.6) Putative 3,4-dihydroxy-2-butanone kinase (EC 2.7.1.-) (Fragment) - Glycine max (Soybean) & (reliability: 680.0) & (original description: 2-phosphoglycerate dehydratase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42962 PE=4 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7g225|b7g225_phatc' "'(at1g04420 : 209.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (gnl|cdd|36788 : 208.0) no description available & (loc_os03g41510.2 : 202.0) no description available & (chl4|510488 : 199.0) no description available & (gnl|cdd|31011 : 198.0) no description available & (ipr023210 : 183.46487) NADP-dependent oxidoreductase domain & (q40648|kcab_orysa : 94.4) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 418.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46990 PE=4 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7gbv3|b7gbv3_phatc' "'(loc_os07g04990.1 : 251.0) no description available & (at1g06690 : 234.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (chl4|521978 : 234.0) no description available & (gnl|cdd|36788 : 209.0) no description available & (gnl|cdd|31011 : 194.0) no description available & (ipr023210 : 154.57431) NADP-dependent oxidoreductase domain & (p40691|a115_tobac : 80.5) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 468.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49777 PE=4 SV=1)'" P '3.5' 'minor CHO metabolism.others' 'tr|b7fr40|b7fr40_phatc' "'(gnl|cdd|37810 : 306.0) no description available & (gnl|cdd|29357 : 279.0) no description available & (at5g37850 : 273.0) Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.; SALT OVERLY SENSITIVE 4 (SOS4); FUNCTIONS IN: pyridoxal kinase activity, kinase activity; INVOLVED IN: pyridoxine biosynthetic process, hyperosmotic salinity response, trichoblast differentiation, pyridoxal 5'-phosphate salvage; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase (InterPro:IPR004625), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749). & (loc_os12g40830.3 : 261.0) no description available & (chl4|520939 : 221.0) no description available & (ipr013749 : 37.129044) Phosphomethylpyrimidine kinase type-1 & (reliability: 546.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8828 PE=4 SV=1)'" P '30.1' 'signalling.in sugar and nutrient physiology' 'tr|b7fum9|b7fum9_phatc' "'(gnl|cdd|29142 : 292.0) no description available & (gnl|cdd|35256 : 283.0) no description available & (chl4|510399 : 216.0) no description available & (loc_os01g59360.1 : 201.0) no description available & (at1g12580 : 200.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (q6ret7|ccamk_medtr : 199.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (ipr017442 : 162.2026) no description available & (reliability: 374.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chk2 PE=3 SV=1)'" P '30.1.2' 'signalling.in sugar and nutrient physiology.pyruvate dehydrogenase kinase' 'tr|b7g0x2|b7g0x2_phatc' "'(chl4|522593 : 310.0) no description available & (gnl|cdd|36006 : 299.0) no description available & (at3g06483 : 283.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (loc_os03g25400.1 : 280.0) no description available & (ipr003594 : 107.751495) ATPase-like, ATP-binding domain & (gnl|cdd|47700 : 58.8) no description available & (reliability: 566.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50961 PE=4 SV=1)'" P '30.11' 'signalling.light' 'tr|b7fyn4|b7fyn4_phatc' "'(chl4|521476 : 128.0) no description available & (loc_os12g01140.1 : 125.0) no description available & (at5g58140 : 122.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (q67ux0|ado2_orysa : 79.0) Putative adagio-like protein 2 - Oryza sativa (Rice) & (gnl|cdd|35722 : 53.9) no description available & (gnl|cdd|29035 : 48.0) no description available & (reliability: 236.0) & (original description: Uncharacterized protein PAS OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PAS PE=4 SV=1)'" P '30.11' 'signalling.light' 'tr|b7fpq7|b7fpq7_phatc' "'(ipr016040 : 92.39108) NAD(P)-binding domain & (gnl|cdd|36417 : 82.8) no description available & (loc_os02g13970.2 : 77.4) no description available & (at4g18810 : 75.9) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NADH:ubiquinone oxidoreductase intermediate-associated protein 30 (InterPro:IPR013857), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescence phenotype 173 (TAIR:AT1G16720.1). & (chl4|523358 : 72.8) no description available & (gnl|cdd|31046 : 59.2) no description available & (reliability: 151.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42835 PE=4 SV=1)'" P '30.11' 'signalling.light' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 88.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '30.11' 'signalling.light' 'tr|b7g9j2|b7g9j2_phatc' "'(chl4|521476 : 128.0) no description available & (at3g45780 : 126.0) Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.; phototropin 1 (PHOT1); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 8 processes; LOCATED IN: internal side of plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os12g01140.5 : 126.0) no description available & (q5z8k3|ado1_orysa : 79.7) Adagio-like protein 1 - Oryza sativa (Rice) & (gnl|cdd|35722 : 52.4) no description available & (gnl|cdd|29035 : 49.9) no description available & (reliability: 252.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8113 PE=1 SV=1)'" P '30.11.1' 'signalling.light.COP9 signalosome' 'tr|b7fqk5|b7fqk5_phatc' "'(gnl|cdd|36767 : 163.0) no description available & (chl4|519750 : 131.0) no description available & (at1g71230 : 127.0) Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses.; COP9-signalosome 5B (CSN5B); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome 5A (TAIR:AT1G22920.1); Has 1278 Blast hits to 1275 proteins in 253 species: Archae - 0; Bacteria - 6; Metazoa - 459; Fungi - 394; Plants - 243; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (loc_os04g56070.2 : 117.0) no description available & (gnl|cdd|85425 : 85.0) no description available & (reliability: 254.0) & (original description: COP9 SigNalosome subunit 5 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CSN5 PE=4 SV=1)'" P '30.11.1' 'signalling.light.COP9 signalosome' 'tr|b7gcf6|b7gcf6_phatc' "'(at5g41790 : 47.8) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37213 : 40.0) no description available & (gnl|cdd|34081 : 37.8) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49956 PE=4 SV=1)'" P '30.2' 'signalling.receptor kinases' 'tr|b7g5l6|b7g5l6_phatc' "'(chl4|523376 : 135.0) no description available & (gnl|cdd|34495 : 90.8) no description available & (gnl|cdd|35752 : 79.3) no description available & (loc_os10g42190.2 : 77.0) no description available & (at5g44700 : 63.9) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p28523|csk2a_maize : 44.7) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 125.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47992 PE=4 SV=1)'" P '30.2.10' 'signalling.receptor kinases.leucine rich repeat X' 'tr|b7g0g8|b7g0g8_phatc' "'(loc_os08g07760.1 : 90.5) no description available & (at1g73066 : 89.0) Leucine-rich repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: PEP1 receptor 1 (TAIR:AT1G73080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (chl4|512905 : 65.9) no description available & (gnl|cdd|39857 : 50.7) no description available & (gnl|cdd|82344 : 44.6) no description available & (reliability: 161.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46212 PE=4 SV=1)'" P '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'tr|b7fyi1|b7fyi1_phatc' "'(at4g20270 : 108.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 105.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (loc_os10g02970.1 : 94.4) no description available & (gnl|cdd|78817 : 72.1) no description available & (gnl|cdd|35481 : 69.2) no description available & (chl4|517964 : 62.8) no description available & (reliability: 204.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45679 PE=4 SV=1)'" P '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'tr|b7g0g8|b7g0g8_phatc' "'(loc_os08g07760.1 : 90.5) no description available & (at1g73066 : 89.0) Leucine-rich repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: PEP1 receptor 1 (TAIR:AT1G73080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (chl4|512905 : 65.9) no description available & (gnl|cdd|39857 : 50.7) no description available & (gnl|cdd|82344 : 44.6) no description available & (reliability: 178.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46212 PE=4 SV=1)'" P '30.2.11' 'signalling.receptor kinases.leucine rich repeat XI' 'tr|b7g5l6|b7g5l6_phatc' "'(chl4|523376 : 135.0) no description available & (gnl|cdd|34495 : 90.8) no description available & (gnl|cdd|35752 : 79.3) no description available & (loc_os10g42190.2 : 77.0) no description available & (at5g44700 : 63.9) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p28523|csk2a_maize : 44.7) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 127.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47992 PE=4 SV=1)'" P '30.2.2' 'signalling.receptor kinases.leucine rich repeat II' 'tr|b7g0g8|b7g0g8_phatc' "'(loc_os08g07760.1 : 90.5) no description available & (at1g73066 : 89.0) Leucine-rich repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: PEP1 receptor 1 (TAIR:AT1G73080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (chl4|512905 : 65.9) no description available & (gnl|cdd|39857 : 50.7) no description available & (gnl|cdd|82344 : 44.6) no description available & (reliability: 172.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46212 PE=4 SV=1)'" P '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'tr|b7fva8|b7fva8_phatc' "'(ipr004436 : 1500.0) Isocitrate dehydrogenase NADP-dependent, monomeric & (gnl|cdd|32666 : 993.0) no description available & (at3g08680 : 35.8) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58300.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45017 PE=4 SV=1)'" P '30.2.3' 'signalling.receptor kinases.leucine rich repeat III' 'tr|b7g0g8|b7g0g8_phatc' "'(loc_os08g07760.1 : 90.5) no description available & (at1g73066 : 89.0) Leucine-rich repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: PEP1 receptor 1 (TAIR:AT1G73080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (chl4|512905 : 65.9) no description available & (gnl|cdd|39857 : 50.7) no description available & (gnl|cdd|82344 : 44.6) no description available & (reliability: 175.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46212 PE=4 SV=1)'" P '30.2.7' 'signalling.receptor kinases.leucine rich repeat VII' 'tr|b7g5l6|b7g5l6_phatc' "'(chl4|523376 : 135.0) no description available & (gnl|cdd|34495 : 90.8) no description available & (gnl|cdd|35752 : 79.3) no description available & (loc_os10g42190.2 : 77.0) no description available & (at5g44700 : 63.9) Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO 2 (GSO2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo sac development, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 300710 Blast hits to 146614 proteins in 5000 species: Archae - 184; Bacteria - 28098; Metazoa - 99114; Fungi - 12121; Plants - 127107; Viruses - 448; Other Eukaryotes - 33638 (source: NCBI BLink). & (p28523|csk2a_maize : 44.7) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 123.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47992 PE=4 SV=1)'" P '30.2.99' 'signalling.receptor kinases.misc' 'tr|b7g5m1|b7g5m1_phatc' "'(gnl|cdd|35499 : 298.0) no description available & (loc_os02g11060.1 : 271.0) no description available & (at1g15470 : 268.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species: Archae - 64; Bacteria - 7048; Metazoa - 15440; Fungi - 9730; Plants - 4355; Viruses - 0; Other Eukaryotes - 5016 (source: NCBI BLink). & (chl4|523944 : 232.0) no description available & (gnl|cdd|29257 : 130.0) no description available & (ipr015943 : 124.83389) WD40/YVTN repeat-like-containing domain & (q40507|gbb3_tobac : 65.9) Guanine nucleotide-binding protein subunit beta - Nicotiana tabacum (Common tobacco) & (reliability: 536.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29212 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fu88|b7fu88_phatc' "'(gnl|cdd|35425 : 973.0) no description available & (q2ras0|aca5_orysa : 589.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (loc_os11g04460.1 : 589.0) no description available & (at3g57330 : 578.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (chl4|512958 : 558.0) no description available & (gnl|cdd|30822 : 556.0) no description available & (ipr023298 : 281.3309) ATPase, P-type, transmembrane domain & (reliability: 1156.0) & (original description: p2B, P type ATPase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ATPase1-2B PE=3 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fum9|b7fum9_phatc' "'(gnl|cdd|29142 : 292.0) no description available & (gnl|cdd|35256 : 283.0) no description available & (chl4|510399 : 216.0) no description available & (loc_os01g59360.1 : 201.0) no description available & (at1g12580 : 200.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (q6ret7|ccamk_medtr : 199.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (ipr017442 : 162.2026) no description available & (reliability: 386.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chk2 PE=3 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7gd08|b7gd08_phatc' "'(at2g27030 : 224.0) encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.; calmodulin 5 (CAM5); FUNCTIONS IN: calcium ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 3 (TAIR:AT3G56800.1); Has 36011 Blast hits to 23475 proteins in 1766 species: Archae - 4; Bacteria - 234; Metazoa - 15635; Fungi - 7487; Plants - 7311; Viruses - 0; Other Eukaryotes - 5340 (source: NCBI BLink). & (p27164|calm3_pethy : 224.0) Calmodulin-related protein - Petunia hybrida (Petunia) & (loc_os07g48780.1 : 215.0) no description available & (chl4|521030 : 207.0) no description available & (ipr011992 : 155.93393) EF-hand-like domain & (gnl|cdd|34727 : 152.0) no description available & (gnl|cdd|35250 : 151.0) no description available & (reliability: 448.0) & (original description: Calmoduline OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CaM1 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fsv2|b7fsv2_phatc' "'(gnl|cdd|36541 : 304.0) no description available & (chl4|520858 : 238.0) no description available & (at1g08860 : 236.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (loc_os02g32160.2 : 229.0) no description available & (gnl|cdd|29232 : 198.0) no description available & (ipr010734 : 66.94932) Copine & (reliability: 472.0) & (original description: Copine 1 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CPNE1b PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b5y3f9|b5y3f9_phatc' "'(loc_os12g30150.1 : 244.0) no description available & (at4g09570 : 237.0) Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 4 (CPK4); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 2 (TAIR:AT1G35670.1); Has 132709 Blast hits to 123975 proteins in 4221 species: Archae - 161; Bacteria - 14258; Metazoa - 49454; Fungi - 17991; Plants - 27137; Viruses - 592; Other Eukaryotes - 23116 (source: NCBI BLink). & (p53683|cdpk2_orysa : 229.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (chl4|524538 : 219.0) no description available & (gnl|cdd|29142 : 204.0) no description available & (gnl|cdd|35255 : 198.0) no description available & (ipr017442 : 107.38859) no description available & (reliability: 474.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_1864 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b5y3g3|b5y3g3_phatc' "'(loc_os05g50810.1 : 274.0) no description available & (p28582|cdpk_dauca : 271.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (at4g04720 : 269.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 21 (CPK21); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.1); Has 137194 Blast hits to 129287 proteins in 3977 species: Archae - 168; Bacteria - 14125; Metazoa - 50898; Fungi - 18038; Plants - 29874; Viruses - 499; Other Eukaryotes - 23592 (source: NCBI BLink). & (gnl|cdd|29142 : 250.0) no description available & (chl4|517183 : 245.0) no description available & (gnl|cdd|35255 : 241.0) no description available & (ipr017442 : 151.98067) no description available & (reliability: 538.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21006 PE=3 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b5y4u7|b5y4u7_phatc' "'(gnl|cdd|37608 : 100.0) no description available & (loc_os01g16970.3 : 81.6) no description available & (at5g56360 : 73.6) Encodes PSL4, beat-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2.; PRIORITY IN SWEET LIFE 4 (PSL4); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011); BEST Arabidopsis thaliana protein match is: protein kinase C substrate, heavy chain-related (TAIR:AT2G42390.1); Has 58797 Blast hits to 35699 proteins in 2008 species: Archae - 449; Bacteria - 9679; Metazoa - 21420; Fungi - 7377; Plants - 2361; Viruses - 398; Other Eukaryotes - 17113 (source: NCBI BLink). & (chl4|517621 : 72.0) no description available & (gnl|cdd|31413 : 37.5) no description available & (reliability: 147.2) & (original description: Alpha glucosidase II OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_54169 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7g1z1|b7g1z1_phatc' "'(gnl|cdd|36541 : 296.0) no description available & (chl4|520858 : 271.0) no description available & (at1g08860 : 233.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (loc_os02g32160.2 : 221.0) no description available & (gnl|cdd|29232 : 206.0) no description available & (ipr010734 : 72.4888) Copine & (reliability: 466.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13587 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fr38|b7fr38_phatc' "'(at5g12180 : 309.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 17 (CPK17); FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of pollen tube growth, protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os05g41270.1 : 308.0) no description available & (gnl|cdd|35255 : 295.0) no description available & (p53683|cdpk2_orysa : 292.0) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1) (CDPK 2) - Oryza sativa (Rice) & (chl4|514363 : 285.0) no description available & (gnl|cdd|29142 : 279.0) no description available & (ipr017442 : 155.988) no description available & (reliability: 618.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_25067 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7gau1|b7gau1_phatc' "'(gnl|cdd|37165 : 549.0) no description available & (at4g05520 : 416.0) Encodes AtEHD2, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD1, At3g20290).; EPS15 homology domain 2 (EHD2); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: plasma membrane, microsome, membrane, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 1 (TAIR:AT3G20290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|523058 : 416.0) no description available & (loc_os02g06340.1 : 413.0) no description available & (gnl|cdd|84713 : 100.0) no description available & (ipr011992 : 52.777134) EF-hand-like domain & (p04352|calm_chlre : 36.2) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 832.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30394 PE=3 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7gdh4|b7gdh4_phatc' "'(gnl|cdd|35893 : 376.0) no description available & (loc_os07g14270.1 : 332.0) no description available & (q9std3|calr_chlre : 329.0) Calreticulin precursor - Chlamydomonas reinhardtii & (chl4|511406 : 329.0) no description available & (gnl|cdd|84651 : 323.0) no description available & (at1g09210 : 315.0) Encodes one of three Arabidopsis calreticulins.; calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). & (ipr001580 : 251.7368) Calreticulin/calnexin & (reliability: 630.0) & (original description: Calreticulin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41172 PE=3 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fra9|b7fra9_phatc' "'(ipr011992 : 103.02854) EF-hand-like domain & (gnl|cdd|36247 : 87.5) no description available & (gnl|cdd|47376 : 84.9) no description available & (chl4|523058 : 42.0) no description available & (at3g20290 : 41.2) Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).; EPS15 homology domain 1 (EHD1); FUNCTIONS IN: GTP binding, GTPase activity, calcium ion binding; INVOLVED IN: endocytosis; LOCATED IN: endosome, microsome, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EPS15 homology (EH) (InterPro:IPR000261), Dynamin, GTPase domain (InterPro:IPR001401), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: EPS15 homology domain 2 (TAIR:AT4G05520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os06g47330.2 : 40.0) no description available & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42442 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7g0s3|b7g0s3_phatc' "'(gnl|cdd|36541 : 85.8) no description available & (chl4|520858 : 73.9) no description available & (loc_os02g32160.2 : 61.2) no description available & (at1g08860 : 56.6) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|47568 : 51.3) no description available & (reliability: 113.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46304 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7gea4|b7gea4_phatc' "'(at1g05500 : 103.0) Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.; NTMC2T2.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT5G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os04g55220.1 : 96.7) no description available & (gnl|cdd|28912 : 57.4) no description available & (gnl|cdd|36248 : 51.0) no description available & (chl4|511534 : 50.4) no description available & (reliability: 202.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50498 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|b7fq42|b7fq42_phatc' "'(gnl|cdd|36541 : 311.0) no description available & (chl4|520858 : 254.0) no description available & (at5g61900 : 237.0) Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.; BONZAI 1 (BON1); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g32160.2 : 226.0) no description available & (gnl|cdd|29232 : 210.0) no description available & (ipr010734 : 74.99206) Copine & (reliability: 474.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8678 PE=4 SV=1)'" P '30.3' 'signalling.calcium' 'tr|a0t0g7|a0t0g7_phatc' "'(gnl|cdd|30812 : 182.0) no description available & (gnl|cdd|35949 : 134.0) no description available & (loc_os08g31870.1 : 112.0) no description available & (at3g53230 : 107.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 107.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (chl4|517510 : 107.0) no description available & (ipr003959 : 60.758812) ATPase, AAA-type, core & (reliability: 194.8) & (original description: Uncharacterized protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf46 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fwx9|b7fwx9_phatc' "'(gnl|cdd|47506 : 255.0) no description available & (gnl|cdd|35301 : 232.0) no description available & (loc_os05g01490.1 : 206.0) no description available & (p36862|yptv3_volca : 205.0) GTP-binding protein yptV3 - Volvox carteri & (chl4|512472 : 204.0) no description available & (at1g02130 : 202.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (ipr013753 : 130.6055) no description available & (reliability: 404.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab18 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b5y3h7|b5y3h7_phatc' "'(gnl|cdd|84818 : 333.0) no description available & (gnl|cdd|35305 : 321.0) no description available & (ipr001019 : 174.591) Guanine nucleotide binding protein (G-protein), alpha subunit & (p49083|gpa1_orysa : 171.0) Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1) (Protein Dwarf1) - Oryza sativa (Rice) & (loc_os05g26890.2 : 171.0) no description available & (at2g26300 : 160.0) Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.; G protein alpha subunit 1 (GP ALPHA 1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 16 processes; LOCATED IN: plasma membrane, endoplasmic reticulum membrane, heterotrimeric G-protein complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant G-protein, alpha subunit (InterPro:IPR002976), Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3745 Blast hits to 3647 proteins in 408 species: Archae - 0; Bacteria - 0; Metazoa - 2360; Fungi - 766; Plants - 268; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink). & (chl4|512584 : 49.3) no description available & (reliability: 625.53424) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_36721 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g4d3|b7g4d3_phatc' "'(gnl|cdd|85433 : 129.0) no description available & (gnl|cdd|35922 : 118.0) no description available & (at4g05330 : 105.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 13 (AGD13); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g40704.1 : 99.8) no description available & (chl4|525803 : 90.5) no description available & (ipr001164 : 69.67539) Arf GTPase activating protein & (q5zci1|mpk10_orysa : 35.8) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (reliability: 285.93195) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21791 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g4u5|b7g4u5_phatc' "'(gnl|cdd|35507 : 308.0) no description available & (p93397|gbb1_tobac : 226.0) Guanine nucleotide-binding protein subunit beta 1 - Nicotiana tabacum (Common tobacco) & (at4g34460 : 215.0) Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 59918 Blast hits to 28704 proteins in 832 species: Archae - 54; Bacteria - 8355; Metazoa - 23550; Fungi - 12390; Plants - 7677; Viruses - 0; Other Eukaryotes - 7892 (source: NCBI BLink). & (loc_os03g46650.1 : 209.0) no description available & (gnl|cdd|29257 : 173.0) no description available & (ipr015943 : 138.95361) WD40/YVTN repeat-like-containing domain & (chl4|522479 : 85.9) no description available & (reliability: 430.0) & (original description: G protein beta subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21897 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'sp|b7g816|guf1_phatc' "'(gnl|cdd|81586 : 1041.0) no description available & (gnl|cdd|35683 : 773.0) no description available & (at5g08650 : 772.0) Small GTP-binding protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), GTP-binding protein LepA, C-terminal (InterPro:IPR013842), Protein synthesis factor, GTP-binding (InterPro:IPR000795), GTP-binding protein LepA (InterPro:IPR006297), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Small GTP-binding protein (TAIR:AT5G39900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|520749 : 751.0) no description available & (loc_os06g05250.1 : 521.0) no description available & (ipr000795 : 107.751495) Elongation factor, GTP-binding domain & (q9fe64|efgm_orysa : 103.0) Elongation factor G, mitochondrial precursor (mEF-G) - Oryza sativa (Rice) & (reliability: 1544.0) & (original description: Translation factor GUF1 homolog, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22622 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g365|b7g365_phatc' "'(p25387|gblp_chlre : 439.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (chl4|514942 : 439.0) no description available & (gnl|cdd|35500 : 417.0) no description available & (at3g18130 : 404.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (loc_os05g47890.1 : 404.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (ipr015943 : 169.98582) WD40/YVTN repeat-like-containing domain & (reliability: 798.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28694 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fw70|b7fw70_phatc' "'(gnl|cdd|35680 : 490.0) no description available & (chl4|523570 : 470.0) no description available & (loc_os04g20220.1 : 457.0) no description available & (at1g18070 : 456.0) Translation elongation factor EF1A/initiation factor IF2gamma family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT5G60390.3). & (gnl|cdd|34853 : 430.0) no description available & (p43643|ef1a_tobac : 270.0) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) - Nicotiana tabacum (Common tobacco) & (ipr000795 : 98.748795) Elongation factor, GTP-binding domain & (reliability: 912.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34493 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g217|b7g217_phatc' "'(gnl|cdd|83103 : 555.0) no description available & (at1g56050 : 407.0) GTP-binding protein-related; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP binding (TAIR:AT1G30580.1); Has 18400 Blast hits to 18396 proteins in 3002 species: Archae - 377; Bacteria - 10244; Metazoa - 785; Fungi - 603; Plants - 304; Viruses - 0; Other Eukaryotes - 6087 (source: NCBI BLink). & (loc_os03g56840.1 : 401.0) no description available & (chl4|514158 : 380.0) no description available & (gnl|cdd|36704 : 369.0) no description available & (ipr012675 : 110.11862) Beta-grasp domain & (q5n941|dmi1_orysa : 35.0) Probable ion channel DMI1, chloroplast precursor - Oryza sativa (Rice) & (reliability: 890.39417) & (original description: Obg-like ATPase 1 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37067 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fp98|b7fp98_phatc' "'(gnl|cdd|29845 : 121.0) no description available & (ipr011993 : 102.66082) Pleckstrin homology-like domain & (chl4|525971 : 96.7) no description available & (loc_os03g18180.1 : 84.7) no description available & (at1g07140 : 73.9) Encodes a putative Ran-binding protein (siRanBP).; SIRANBP; FUNCTIONS IN: Ran GTPase binding; INVOLVED IN: intracellular transport, protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 2132 Blast hits to 1580 proteins in 275 species: Archae - 9; Bacteria - 76; Metazoa - 1014; Fungi - 369; Plants - 163; Viruses - 39; Other Eukaryotes - 462 (source: NCBI BLink). & (gnl|cdd|36082 : 69.0) no description available & (reliability: 283.68057) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42712 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fq23|b7fq23_phatc' "'(gnl|cdd|31927 : 207.0) no description available & (ipr014710 : 153.48474) RmlC-like jelly roll fold & (chl4|511990 : 152.0) no description available & (loc_os03g62790.2 : 144.0) no description available & (at1g50590 : 139.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G43120.1); Has 7420 Blast hits to 7420 proteins in 1472 species: Archae - 66; Bacteria - 4684; Metazoa - 72; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2254 (source: NCBI BLink). & (reliability: 272.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42930 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fx51|b7fx51_phatc' "'(gnl|cdd|69160 : 126.0) no description available & (ipr008636 : 92.008095) HOOK & (gnl|cdd|35383 : 57.2) no description available & (at2g25320 : 42.4) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (loc_os04g57140.1 : 42.4) no description available & (chl4|518482 : 38.9) no description available & (reliability: 84.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45285 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fy56|b7fy56_phatc' "'(gnl|cdd|35524 : 357.0) no description available & (gnl|cdd|87748 : 170.0) no description available & (ipr015049 : 92.17597) Domain of unknown function DUF1900 & (q39336|gblp_brana : 68.9) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (at1g18080 : 67.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (chl4|512570 : 64.3) no description available & (loc_os01g49290.1 : 62.4) no description available & (reliability: 121.0) & (original description: Coronin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45580 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g0t9|b7g0t9_phatc' "'(gnl|cdd|86276 : 57.5) no description available & (gnl|cdd|38352 : 50.6) no description available & (chl4|510864 : 40.4) no description available & (at1g55190 : 39.3) PRA7; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT3G13720.1); Has 523 Blast hits to 523 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 90; Plants - 309; Viruses - 6; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 77.0) & (original description: PRA1 family protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46321 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7gdu6|b7gdu6_phatc' "'(gnl|cdd|36700 : 470.0) no description available & (gnl|cdd|31357 : 455.0) no description available & (loc_os07g43470.1 : 446.0) no description available & (at4g39520 : 439.0) Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity.; GTP-binding protein-related; FUNCTIONS IN: GDP binding, GTP binding, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 19252 Blast hits to 19228 proteins in 2957 species: Archae - 773; Bacteria - 12312; Metazoa - 831; Fungi - 661; Plants - 370; Viruses - 0; Other Eukaryotes - 4305 (source: NCBI BLink). & (chl4|522869 : 409.0) no description available & (ipr004095 : 35.647438) TGS & (reliability: 878.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51277 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g685|b7g685_phatc' "'(loc_os05g46560.2 : 98.2) no description available & (gnl|cdd|37120 : 85.0) no description available & (at5g19320 : 82.4) Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.; RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|512397 : 70.1) no description available & (gnl|cdd|29015 : 62.6) no description available & (reliability: 164.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54869 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7s3s7|b7s3s7_phatc' "'(gnl|cdd|57933 : 218.0) no description available & (gnl|cdd|35301 : 207.0) no description available & (at5g59840 : 174.0) Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g60530.1 : 173.0) no description available & (q39433|rb1bv_betvu : 172.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (chl4|514113 : 161.0) no description available & (ipr013753 : 116.20806) no description available & (reliability: 348.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PtRabX1 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7gdz3|b7gdz3_phatc' "'(gnl|cdd|57954 : 323.0) no description available & (gnl|cdd|35310 : 314.0) no description available & (p40393|ric2_orysa : 293.0) Ras-related protein RIC2 - Oryza sativa (Rice) & (loc_os06g35814.1 : 293.0) no description available & (chl4|521265 : 292.0) no description available & (at4g18430 : 290.0) RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink). & (ipr013753 : 132.808) no description available & (reliability: 580.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab11 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g8a9|b7g8a9_phatc' "'(loc_os02g43690.1 : 317.0) no description available & (gnl|cdd|35307 : 316.0) no description available & (q05737|yptm2_maize : 315.0) GTP-binding protein YPTM2 - Zea mays (Maize) & (gnl|cdd|57955 : 314.0) no description available & (at5g47200 : 312.0) RAB GTPase homolog 1A (RAB1A); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1C (TAIR:AT4G17530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|514113 : 309.0) no description available & (ipr013753 : 146.05711) no description available & (reliability: 624.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab1a PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g5m5|b7g5m5_phatc' "'(p36863|yptv4_volca : 318.0) GTP-binding protein yptV4 (RAB2 homolog) - Volvox carteri & (chl4|519544 : 316.0) no description available & (at4g17170 : 310.0) member of RAB gene family; RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink). & (gnl|cdd|57952 : 310.0) no description available & (gnl|cdd|35321 : 307.0) no description available & (loc_os02g37420.1 : 305.0) no description available & (ipr013753 : 129.16791) no description available & (reliability: 620.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab2 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fsb0|b7fsb0_phatc' "'(gnl|cdd|57946 : 287.0) no description available & (gnl|cdd|35315 : 259.0) no description available & (loc_os03g46390.1 : 206.0) no description available & (p31583|rhn1_nicpl : 205.0) Ras-related protein RHN1 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at4g19640 : 199.0) Encodes Ara7.; ARA7; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab5-related (InterPro:IPR015599); BEST Arabidopsis thaliana protein match is: RAB homolog 1 (TAIR:AT5G45130.1); Has 26416 Blast hits to 26384 proteins in 719 species: Archae - 27; Bacteria - 133; Metazoa - 13862; Fungi - 3690; Plants - 2969; Viruses - 20; Other Eukaryotes - 5715 (source: NCBI BLink). & (chl4|513213 : 196.0) no description available & (ipr013753 : 130.65956) no description available & (reliability: 398.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab5a PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g312|b7g312_phatc' "'(gnl|cdd|57947 : 299.0) no description available & (gnl|cdd|35317 : 289.0) no description available & (at5g10260 : 252.0) RAB GTPase homolog H1E (RABH1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 27017 Blast hits to 26988 proteins in 737 species: Archae - 21; Bacteria - 160; Metazoa - 14299; Fungi - 3762; Plants - 2966; Viruses - 20; Other Eukaryotes - 5789 (source: NCBI BLink). & (loc_os07g31370.1 : 249.0) no description available & (chl4|511602 : 248.0) no description available & (p25766|rgp1_orysa : 129.0) Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) - Oryza sativa (Rice) & (ipr013753 : 123.64645) no description available & (reliability: 504.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Rab6 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g6j6|b7g6j6_phatc' "'(ipr018203 : 1500.0) GDP dissociation inhibitor & (gnl|cdd|64840 : 564.0) no description available & (gnl|cdd|36652 : 505.0) no description available & (at5g09550 : 457.0) GDP dissociation inhibitor family protein / Rab GTPase activator family protein; FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1326 Blast hits to 1219 proteins in 259 species: Archae - 2; Bacteria - 4; Metazoa - 658; Fungi - 290; Plants - 182; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). & (loc_os05g34540.1 : 453.0) no description available & (chl4|519479 : 452.0) no description available & (q2vex9|crtso_dauca : 42.4) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-) (CrtISO) - Daucus carota (Carrot) & (reliability: 914.0) & (original description: Rab GDP dissociation inhibitor OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RabGDI PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b5y5r2|b5y5r2_phatc' "'(gnl|cdd|57933 : 204.0) no description available & (gnl|cdd|35301 : 187.0) no description available & (q39572|yptc6_chlre : 146.0) Ras-related protein YPTC6 - Chlamydomonas reinhardtii & (chl4|521265 : 146.0) no description available & (loc_os10g31830.1 : 140.0) no description available & (at3g07410 : 137.0) RAB GTPase homolog A5B (RABA5b); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G43130.1); Has 27936 Blast hits to 27886 proteins in 749 species: Archae - 21; Bacteria - 143; Metazoa - 14734; Fungi - 3835; Plants - 3288; Viruses - 20; Other Eukaryotes - 5895 (source: NCBI BLink). & (ipr013753 : 100.089966) no description available & (reliability: 274.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=RabX2 PE=4 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g8q4|b7g8q4_phatc' "'(gnl|cdd|47507 : 350.0) no description available & (p41918|rana1_tobac : 335.0) GTP-binding nuclear protein Ran-A1 - Nicotiana tabacum (Common tobacco) & (gnl|cdd|35319 : 335.0) no description available & (at5g55190 : 333.0) A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.; RAN GTPase 3 (RAN3); FUNCTIONS IN: protein binding, GTP binding, GTPase activity; INVOLVED IN: protein import into nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753); BEST Arabidopsis thaliana protein match is: RAS-related nuclear protein-1 (TAIR:AT5G20010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g42530.1 : 317.0) no description available & (chl4|521309 : 317.0) no description available & (ipr013753 : 104.350296) no description available & (reliability: 666.0) & (original description: GTP-binding nuclear protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Ran1 PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7fxx2|b7fxx2_phatc' "'(gnl|cdd|57938 : 305.0) no description available & (gnl|cdd|35300 : 268.0) no description available & (loc_os01g23620.1 : 266.0) no description available & (at4g02080 : 265.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.; secretion-associated RAS super family 2 (SAR2); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT3G62560.1); Has 6784 Blast hits to 6782 proteins in 374 species: Archae - 2; Bacteria - 40; Metazoa - 3245; Fungi - 1245; Plants - 1081; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). & (o04266|sar1a_bracm : 265.0) GTP-binding protein SAR1A - Brassica campestris (Field mustard) & (chl4|512158 : 262.0) no description available & (ipr006689 : 137.6851) Small GTPase superfamily, ARF/SAR type & (reliability: 530.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Sar1a PE=3 SV=1)'" P '30.5' 'signalling.G-proteins' 'tr|b7g9l9|b7g9l9_phatc' "'(gnl|cdd|57953 : 286.0) no description available & (gnl|cdd|35301 : 268.0) no description available & (q39433|rb1bv_betvu : 236.0) Ras-related protein RAB1BV - Beta vulgaris (Sugar beet) & (loc_os05g38630.2 : 232.0) no description available & (at3g46060 : 227.0) small GTP-binding protein (ara-3); ARA3; FUNCTIONS IN: GTP binding; INVOLVED IN: ethylene mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G59840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|514113 : 219.0) no description available & (ipr013753 : 140.45769) no description available & (reliability: 454.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Sec4 PE=4 SV=1)'" P '30.7' 'signalling.14-3-3 proteins' 'tr|b7g5y2|b7g5y2_phatc' "'(gnl|cdd|84639 : 359.0) no description available & (gnl|cdd|36059 : 324.0) no description available & (q6zkc0|14333_orysa : 305.0) 14-3-3-like protein GF14-C (G-box factor 14-3-3 homolog C) - Oryza sativa (Rice) & (loc_os08g33370.2 : 305.0) no description available & (at4g09000 : 304.0) Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available.; general regulatory factor 1 (GRF1); CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: GF14 protein phi chain (TAIR:AT1G35160.2); Has 2700 Blast hits to 2690 proteins in 380 species: Archae - 0; Bacteria - 6; Metazoa - 1254; Fungi - 308; Plants - 767; Viruses - 0; Other Eukaryotes - 365 (source: NCBI BLink). & (chl4|514093 : 299.0) no description available & (ipr000308 : 269.30716) 14-3-3 protein & (reliability: 1079.2876) & (original description: 14-3-3-like protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_5651 PE=3 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fvw7|b7fvw7_phatc' "'(ipr001609 : 1500.0) Myosin head, motor domain & (gnl|cdd|47571 : 735.0) no description available & (gnl|cdd|35382 : 569.0) no description available & (at5g43900 : 531.0) Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.; myosin 2 (MYA2); CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI B (TAIR:AT1G04160.1). & (loc_os03g48140.1 : 518.0) no description available & (chl4|516205 : 507.0) no description available & (reliability: 2825.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=myoA4 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7g878|b7g878_phatc' "'(ipr004000 : 1500.0) Actin-like & (p53498|act_chlre : 645.0) Actin - Chlamydomonas reinhardtii & (chl4|515031 : 645.0) no description available & (at3g12110 : 639.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (loc_os05g01600.2 : 637.0) no description available & (gnl|cdd|35895 : 605.0) no description available & (gnl|cdd|47597 : 565.0) no description available & (reliability: 1180.0) & (original description: Actin/actin like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACT1 PE=3 SV=1)'" P '31.1' 'cell.organisation' 'tr|b5y5d2|b5y5d2_phatc' "'(gnl|cdd|36037 : 167.0) no description available & (ipr018502 : 113.00102) Annexin repeat & (loc_os09g23160.1 : 84.7) no description available & (at5g12380 : 79.0) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51074|anx4_fraan : 78.2) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (gnl|cdd|79507 : 52.0) no description available & (reliability: 158.0) & (original description: Annexin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ANXA1 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7g5c0|b7g5c0_phatc' "'(p53498|act_chlre : 646.0) Actin - Chlamydomonas reinhardtii & (chl4|515031 : 646.0) no description available & (at3g12110 : 639.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (loc_os03g50890.1 : 637.0) no description available & (gnl|cdd|35895 : 603.0) no description available & (gnl|cdd|28896 : 563.0) no description available & (ipr004000 : 349.8106) Actin-like & (reliability: 1182.0) & (original description: Actin/actin like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Act2 PE=3 SV=1)'" P '31.1' 'cell.organisation' 'tr|b5y5b2|b5y5b2_phatc' "'(gnl|cdd|47597 : 430.0) no description available & (gnl|cdd|35895 : 402.0) no description available & (p17299|act3_orysa : 377.0) Actin-3 - Oryza sativa (Rice) & (loc_os03g61970.1 : 377.0) no description available & (at3g53750 : 376.0) Member of the Actin gene family. Expressed in mature pollen.; actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink). & (chl4|515031 : 369.0) no description available & (ipr004000 : 269.06598) Actin-like & (reliability: 716.0) & (original description: Actin related protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ARP1 PE=3 SV=1)'" P '31.1' 'cell.organisation' 'tr|a0t0m5|a0t0m5_phatc' "'(at3g24530 : 150.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (loc_os02g16660.1 : 141.0) no description available & (chl4|522034 : 127.0) no description available & (gnl|cdd|30812 : 68.3) no description available & (gnl|cdd|37215 : 41.9) no description available & (reliability: 300.0) & (original description: Rubisco expression protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=cbbX PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b5y5d4|b5y5d4_phatc' "'(gnl|cdd|36037 : 166.0) no description available & (ipr018502 : 117.64256) Annexin repeat & (loc_os09g23160.1 : 84.7) no description available & (at5g12380 : 81.3) annexin 8 (ANNAT8); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to water deprivation, response to salt stress, response to cold, response to heat; EXPRESSED IN: embryo, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51074|anx4_fraan : 68.9) Annexin-like protein RJ4 - Fragaria ananassa (Strawberry) & (gnl|cdd|79507 : 54.7) no description available & (reliability: 162.6) & (original description: Annexin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44109 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7g9i9|b7g9i9_phatc' "'(loc_os03g56790.1 : 116.0) no description available & (gnl|cdd|28897 : 114.0) no description available & (gnl|cdd|36946 : 106.0) no description available & (at5g59880 : 105.0) Encodes actin depolymerizing factor 3 (ADF3).; actin depolymerizing factor 3 (ADF3); FUNCTIONS IN: actin binding; INVOLVED IN: response to oxidative stress, response to cadmium ion; LOCATED IN: mitochondrion, intracellular, chloroplast, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 1 (TAIR:AT3G46010.1); Has 1140 Blast hits to 1140 proteins in 246 species: Archae - 0; Bacteria - 3; Metazoa - 383; Fungi - 126; Plants - 514; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (q9fvi1|adf2_pethy : 102.0) Actin-depolymerizing factor 2 (ADF 2) - Petunia hybrida (Petunia) & (chl4|524749 : 85.5) no description available & (ipr002108 : 67.97894) Actin-binding, cofilin/tropomyosin type & (reliability: 292.96313) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_15613 PE=3 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7gar7|b7gar7_phatc' "'(q39580|dyl1_chlre : 149.0) Dynein 8 kDa light chain, flagellar outer arm - Chlamydomonas reinhardtii & (chl4|521089 : 149.0) no description available & (gnl|cdd|85315 : 140.0) no description available & (gnl|cdd|38640 : 128.0) no description available & (at4g15930 : 120.0) Dynein light chain type 1 family protein; FUNCTIONS IN: microtubule motor activity; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule associated complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynein light chain, type 1/2, conserved site (InterPro:IPR019763), Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT5G20110.1); Has 1403 Blast hits to 1403 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 730; Fungi - 108; Plants - 264; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (loc_os01g15260.1 : 108.0) no description available & (ipr001372 : 101.77578) Dynein light chain, type 1/2 & (reliability: 418.1076) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16008 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fqi0|b7fqi0_phatc' "'(loc_os06g12530.2 : 184.0) no description available & (gnl|cdd|37476 : 172.0) no description available & (at5g53400 : 163.0) Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.; BOBBER1 (BOB1); CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G27890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|517325 : 163.0) no description available & (gnl|cdd|86758 : 63.7) no description available & (reliability: 326.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41701 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fr99|b7fr99_phatc' "'(at3g24530 : 125.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (loc_os02g16660.2 : 123.0) no description available & (chl4|522034 : 87.8) no description available & (gnl|cdd|30812 : 55.2) no description available & (gnl|cdd|39613 : 43.1) no description available & (p54774|cdc48_soybn : 37.7) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 250.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42434 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fpb9|b7fpb9_phatc' "'(at3g24530 : 134.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (loc_os02g16660.1 : 123.0) no description available & (chl4|522034 : 104.0) no description available & (gnl|cdd|84432 : 65.4) no description available & (gnl|cdd|37210 : 47.3) no description available & (o04979|lonh1_spiol : 38.5) Lon protease homolog 1, mitochondrial precursor (EC 3.4.21.-) - Spinacia oleracea (Spinach) & (reliability: 268.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42728 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fqe7|b7fqe7_phatc' "'(gnl|cdd|36359 : 64.3) no description available & (gnl|cdd|31389 : 62.0) no description available & (loc_os02g11750.1 : 38.5) no description available & (at4g27180 : 37.7) kinesin heavy chain subunit; kinesin 2 (ATK2); FUNCTIONS IN: microtubule binding, microtubule motor activity; INVOLVED IN: microtubule-based movement; LOCATED IN: kinesin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 3 (TAIR:AT5G54670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 75.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43037 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 90.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7fx69|b7fx69_phatc' '(at3g23400 : 37.4) fibrillin 4 (FIB4); FUNCTIONS IN: structural molecule activity; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 367 Blast hits to 365 proteins in 76 species: Archae - 0; Bacteria - 87; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (gnl|cdd|68332 : 35.8) no description available & (reliability: 74.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45297 PE=4 SV=1)' P '31.1' 'cell.organisation' 'tr|b7fr98|b7fr98_phatc' "'(at3g24530 : 106.0) AAA-type ATPase family protein / ankyrin repeat family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Ankyrin repeat-containing domain (InterPro:IPR020683), CbxX/CfqX (InterPro:IPR000641), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 1 in Arabidopsis thaliana (TAIR:AT2G28840.1); Has 62125 Blast hits to 27268 proteins in 1602 species: Archae - 369; Bacteria - 7189; Metazoa - 29752; Fungi - 5124; Plants - 2920; Viruses - 566; Other Eukaryotes - 16205 (source: NCBI BLink). & (loc_os02g16660.1 : 104.0) no description available & (chl4|522032 : 78.2) no description available & (gnl|cdd|84432 : 55.4) no description available & (gnl|cdd|35952 : 42.3) no description available & (reliability: 212.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4937 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7gaj5|b7gaj5_phatc' "'(gnl|cdd|29261 : 67.0) no description available & (gnl|cdd|35729 : 60.8) no description available & (chl4|523541 : 55.8) no description available & (loc_os10g43040.1 : 55.5) no description available & (at2g03430 : 53.9) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 38.5) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (ipr020683 : 38.355488) Ankyrin repeat-containing domain & (reliability: 107.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49425 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7gaj6|b7gaj6_phatc' "'(gnl|cdd|29261 : 74.7) no description available & (gnl|cdd|39379 : 60.0) no description available & (chl4|519083 : 59.7) no description available & (at2g03430 : 55.5) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (loc_os03g55110.2 : 55.5) no description available & (q8vyx2|akt1_orysa : 47.8) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (ipr020683 : 43.653805) Ankyrin repeat-containing domain & (reliability: 111.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49426 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7gce0|b7gce0_phatc' "'(gnl|cdd|68332 : 55.0) no description available & (chl4|521443 : 49.3) no description available & (loc_os07g28790.1 : 44.7) no description available & (at1g51110 : 40.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 329 Blast hits to 327 proteins in 75 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 242; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (q7xbw5|pap3_orysa : 39.7) Probable plastid-lipid-associated protein 3, chloroplast precursor - Oryza sativa (Rice) & (gnl|cdd|36011 : 39.7) no description available & (reliability: 80.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49943 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7gdm5|b7gdm5_phatc' '(gnl|cdd|29162 : 182.0) no description available & (gnl|cdd|36867 : 175.0) no description available & (loc_os08g09240.2 : 172.0) no description available & (chl4|516866 : 172.0) no description available & (at2g05630 : 169.0) in the Arabidopsis autophagy pathway; ATG8D; FUNCTIONS IN: microtubule binding; INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT1G62040.2); Has 1504 Blast hits to 1502 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 717; Fungi - 172; Plants - 303; Viruses - 3; Other Eukaryotes - 309 (source: NCBI BLink). & (ipr004241 : 104.37135) Autophagy protein Atg8 ubiquitin-like & (reliability: 338.0) & (original description: Autophagy-related protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50303 PE=3 SV=1)' P '31.1' 'cell.organisation' 'tr|b7gdf5|b7gdf5_phatc' "'(gnl|cdd|29261 : 43.5) no description available & (gnl|cdd|35725 : 40.8) no description available & (chl4|510870 : 39.7) no description available & (loc_os03g55110.2 : 37.0) no description available & (at4g19150 : 35.8) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55162 PE=4 SV=1)'" P '31.1' 'cell.organisation' 'tr|b7g1k0|b7g1k0_phatc' "'(gnl|cdd|35729 : 67.7) no description available & (gnl|cdd|29261 : 66.3) no description available & (at5g53470 : 55.5) Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.; acyl-CoA binding protein 1 (ACBP1); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 2 (TAIR:AT4G27780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os04g36740.1 : 55.1) no description available & (chl4|520929 : 55.1) no description available & (ipr020683 : 51.05735) Ankyrin repeat-containing domain & (q8vyx2|akt1_orysa : 42.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 104.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8058 PE=4 SV=1)'" P '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'tr|b7g878|b7g878_phatc' "'(ipr004000 : 1500.0) Actin-like & (p53498|act_chlre : 645.0) Actin - Chlamydomonas reinhardtii & (chl4|515031 : 645.0) no description available & (at3g12110 : 639.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (loc_os05g01600.2 : 637.0) no description available & (gnl|cdd|35895 : 605.0) no description available & (gnl|cdd|47597 : 565.0) no description available & (reliability: 1278.0) & (original description: Actin/actin like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ACT1 PE=3 SV=1)'" P '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'tr|b7g5c0|b7g5c0_phatc' "'(p53498|act_chlre : 646.0) Actin - Chlamydomonas reinhardtii & (chl4|515031 : 646.0) no description available & (at3g12110 : 639.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (loc_os03g50890.1 : 637.0) no description available & (gnl|cdd|35895 : 603.0) no description available & (gnl|cdd|28896 : 563.0) no description available & (ipr004000 : 349.8106) Actin-like & (reliability: 1278.0) & (original description: Actin/actin like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Act2 PE=3 SV=1)'" P '31.1.1.1.1' 'cell.organisation.cytoskeleton.actin.Actin' 'tr|b5y5b2|b5y5b2_phatc' "'(gnl|cdd|47597 : 430.0) no description available & (gnl|cdd|35895 : 402.0) no description available & (p17299|act3_orysa : 377.0) Actin-3 - Oryza sativa (Rice) & (loc_os03g61970.1 : 377.0) no description available & (at3g53750 : 376.0) Member of the Actin gene family. Expressed in mature pollen.; actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink). & (chl4|515031 : 369.0) no description available & (ipr004000 : 269.06598) Actin-like & (reliability: 752.0) & (original description: Actin related protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ARP1 PE=3 SV=1)'" P '31.1.1.1.3' 'cell.organisation.cytoskeleton.actin.actin binding' 'tr|b7fuj2|b7fuj2_phatc' "'(gnl|cdd|35664 : 230.0) no description available & (at2g41740 : 170.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (loc_os03g24220.1 : 169.0) no description available & (chl4|514020 : 122.0) no description available & (gnl|cdd|47591 : 67.3) no description available & (reliability: 340.0) & (original description: Gelosin/severin like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GEL3 PE=4 SV=1)'" P '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'tr|b5y3w7|b5y3w7_phatc' "'(ipr003008 : 1500.0) Tubulin/FtsZ, GTPase domain & (gnl|cdd|30218 : 825.0) no description available & (p04690|tbb_chlre : 728.0) Tubulin beta-1/beta-2 chain - Chlamydomonas reinhardtii & (chl4|513888 : 728.0) no description available & (at5g23860 : 715.0) beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.; tubulin beta 8 (TUB8); CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1). & (loc_os02g07060.1 : 714.0) no description available & (gnl|cdd|36589 : 513.0) no description available & (reliability: 1430.0) & (original description: Tubulin beta chain OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21122 PE=3 SV=1)'" P '31.1.1.2' 'cell.organisation.cytoskeleton.mikrotubuli' 'tr|b7g0c3|b7g0c3_phatc' "'(gnl|cdd|30217 : 881.0) no description available & (q6vag0|tba2_goshi : 790.0) Tubulin alpha-2 chain (Alpha-2 tubulin) - Gossypium hirsutum (Upland cotton) & (at4g14960 : 785.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (loc_os11g14220.2 : 778.0) no description available & (chl4|521991 : 773.0) no description available & (gnl|cdd|36590 : 680.0) no description available & (ipr003008 : 286.72452) Tubulin/FtsZ, GTPase domain & (reliability: 1570.0) & (original description: Tubulin alpha chain OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54534 PE=3 SV=1)'" P '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'tr|b7fp52|b7fp52_phatc' "'(gnl|cdd|35383 : 64.1) no description available & (gnl|cdd|31389 : 53.5) no description available & (chl4|523067 : 45.8) no description available & (at1g04600 : 44.3) member of Myosin-like proteins; myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink). & (loc_os02g57190.1 : 43.9) no description available & (q5jly8|goga5_orysa : 36.6) Golgin-84 - Oryza sativa (Rice) & (reliability: 88.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42675 PE=4 SV=1)'" P '31.1.1.3.11' 'cell.organisation.cytoskeleton.Myosin.Class XI' 'tr|b7fus2|b7fus2_phatc' "'(chl4|511507 : 171.0) no description available & (gnl|cdd|30575 : 124.0) no description available & (at1g58210 : 37.4) EMBRYO DEFECTIVE 1674 (EMB1674); CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G09720.1); Has 30818 Blast hits to 19641 proteins in 1442 species: Archae - 565; Bacteria - 3414; Metazoa - 15518; Fungi - 2982; Plants - 1779; Viruses - 78; Other Eukaryotes - 6482 (source: NCBI BLink). & (gnl|cdd|35832 : 36.5) no description available & (reliability: 70.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44639 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b5y3r0|b5y3r0_phatc' "'(loc_os10g30580.1 : 1122.0) no description available & (at5g03340 : 1117.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 1104.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (chl4|523252 : 1102.0) no description available & (gnl|cdd|35949 : 826.0) no description available & (gnl|cdd|30812 : 473.0) no description available & (ipr003959 : 99.92745) ATPase, AAA-type, core & (reliability: 2234.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hCdc48 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7g0j8|b7g0j8_phatc' "'(gnl|cdd|38300 : 333.0) no description available & (chl4|518721 : 280.0) no description available & (gnl|cdd|48213 : 273.0) no description available & (loc_os03g62490.1 : 265.0) no description available & (at1g03860 : 247.0) prohibitin 2; prohibitin 2 (PHB2); INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 7 (TAIR:AT5G44140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr001107 : 44.690723) Band 7 protein & (reliability: 450.0) & (original description: Prohibitin-like protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12799 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7g898|b7g898_phatc' "'(ipr009091 : 153.93672) Regulator of chromosome condensation/beta-lactamase-inhibitor protein II & (gnl|cdd|34783 : 92.4) no description available & (loc_os02g34860.1 : 85.5) no description available & (gnl|cdd|36640 : 79.0) no description available & (at5g63860 : 77.4) UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus.; UVB-RESISTANCE 8 (UVR8); FUNCTIONS IN: chromatin binding, guanyl-nucleotide exchange factor activity; INVOLVED IN: response to UV, response to UV-B; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|522357 : 65.5) no description available & (reliability: 139.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39304 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7gan1|b7gan1_phatc' "'(at2g38670 : 325.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 320.0) no description available & (loc_os10g24810.1 : 317.0) no description available & (chl4|513669 : 301.0) no description available & (gnl|cdd|28836 : 188.0) no description available & (ipr014729 : 136.43234) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 650.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40163 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7fuq8|b7fuq8_phatc' "'(loc_os10g30580.1 : 675.0) no description available & (at3g53230 : 673.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 673.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (chl4|523252 : 659.0) no description available & (gnl|cdd|35949 : 595.0) no description available & (gnl|cdd|30812 : 421.0) no description available & (ipr003959 : 88.92535) ATPase, AAA-type, core & (reliability: 1346.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41850 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7fnv0|b7fnv0_phatc' "'(gnl|cdd|38777 : 99.6) no description available & (gnl|cdd|85886 : 94.9) no description available & (loc_os01g39380.2 : 63.2) no description available & (at1g49040 : 60.1) Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.; STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1); INVOLVED IN: multidimensional cell growth, guard mother cell cytokinesis, cytokinesis by cell plate formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), dDENN (InterPro:IPR005112), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), uDENN (InterPro:IPR005113), WD40 repeat-like-containing domain (InterPro:IPR011046), DENN (InterPro:IPR001194), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: pleiotropic regulatory locus 1 (TAIR:AT4G15900.1). & (chl4|513091 : 48.5) no description available & (ipr001194 : 47.191135) DENN domain & (reliability: 120.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42592 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7fx51|b7fx51_phatc' "'(gnl|cdd|69160 : 126.0) no description available & (ipr008636 : 92.008095) HOOK & (gnl|cdd|35383 : 57.2) no description available & (at2g25320 : 42.4) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (loc_os04g57140.1 : 42.4) no description available & (chl4|518482 : 38.9) no description available & (reliability: 79.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45285 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7g6q3|b7g6q3_phatc' "'(gnl|cdd|29621 : 113.0) no description available & (gnl|cdd|39956 : 90.0) no description available & (ipr002661 : 73.682724) Ribosome recycling factor & (at3g63190 : 73.6) The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development.; ""ribosome recycling factor, chloroplast precursor"" (RRF); FUNCTIONS IN: copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: Ribosome recycling factor (TAIR:AT3G01800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p37706|rrfc_dauca : 72.4) Ribosome recycling factor, chloroplast precursor (Ribosome-releasing factor, chloroplast) (Nuclear located protein D2) (Fragment) - Daucus carota (Carrot) & (loc_os07g38300.1 : 67.8) no description available & (chl4|520554 : 67.0) no description available & (reliability: 147.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48316 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7g6w8|b7g6w8_phatc' "'(gnl|cdd|30231 : 434.0) no description available & (chl4|515936 : 290.0) no description available & (at3g52750 : 288.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (loc_os03g44420.1 : 288.0) no description available & (ipr003008 : 187.3079) Tubulin/FtsZ, GTPase domain & (reliability: 576.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48370 PE=3 SV=1)'" P '31.2' 'cell.division' 'tr|b7ged0|b7ged0_phatc' "'(gnl|cdd|36640 : 186.0) no description available & (ipr009091 : 158.40837) Regulator of chromosome condensation/beta-lactamase-inhibitor protein II & (loc_os04g56720.1 : 153.0) no description available & (at1g19880 : 151.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (chl4|517991 : 143.0) no description available & (gnl|cdd|34783 : 102.0) no description available & (reliability: 302.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50520 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7gdg0|b7gdg0_phatc' "'(gnl|cdd|30231 : 445.0) no description available & (chl4|515936 : 279.0) no description available & (loc_os05g37160.1 : 273.0) no description available & (at3g52750 : 272.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (ipr003008 : 192.724) Tubulin/FtsZ, GTPase domain & (gnl|cdd|35484 : 35.7) no description available & (reliability: 544.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56243 PE=3 SV=1)'" P '31.2' 'cell.division' 'tr|b7g5f6|b7g5f6_phatc' "'(gnl|cdd|30231 : 441.0) no description available & (loc_os03g44420.1 : 293.0) no description available & (at3g52750 : 285.0) Nuclear gene that encodes a plastidial division protein (FtsZ2-2).; FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink). & (chl4|515936 : 256.0) no description available & (ipr003008 : 190.37262) Tubulin/FtsZ, GTPase domain & (reliability: 570.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56595 PE=3 SV=1)'" P '31.2' 'cell.division' 'tr|b7g1t3|b7g1t3_phatc' "'(loc_os03g05730.1 : 834.0) no description available & (p54774|cdc48_soybn : 821.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at3g53230 : 814.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (chl4|523252 : 812.0) no description available & (gnl|cdd|35949 : 672.0) no description available & (gnl|cdd|30812 : 433.0) no description available & (ipr003959 : 94.73449) ATPase, AAA-type, core & (reliability: 1628.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=sCdc48 PE=4 SV=1)'" P '31.2' 'cell.division' 'tr|b7fye7|b7fye7_phatc' "'(gnl|cdd|36514 : 351.0) no description available & (gnl|cdd|85171 : 288.0) no description available & (ipr001619 : 260.5346) Sec1-like protein & (at4g12120 : 226.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 223.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (loc_os06g04450.2 : 223.0) no description available & (chl4|513293 : 105.0) no description available & (reliability: 436.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UNC18 PE=3 SV=1)'" P '31.2' 'cell.division' 'tr|a0t0g7|a0t0g7_phatc' "'(gnl|cdd|30812 : 182.0) no description available & (gnl|cdd|35949 : 134.0) no description available & (loc_os08g31870.1 : 112.0) no description available & (at3g53230 : 107.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 107.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (chl4|517510 : 107.0) no description available & (ipr003959 : 60.758812) ATPase, AAA-type, core & (reliability: 214.0) & (original description: Uncharacterized protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf46 PE=4 SV=1)'" P '31.3' 'cell.cycle' 'tr|b7fux2|b7fux2_phatc' "'(gnl|cdd|35814 : 338.0) no description available & (p23111|cdc2_maize : 295.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (at3g48750 : 293.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (loc_os03g02680.1 : 293.0) no description available & (chl4|510573 : 273.0) no description available & (gnl|cdd|29142 : 252.0) no description available & (ipr017442 : 137.41316) no description available & (reliability: 586.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hCDK3 PE=3 SV=1)'" P '31.3' 'cell.cycle' 'tr|b7gdw6|b7gdw6_phatc' "'(gnl|cdd|35814 : 381.0) no description available & (p23111|cdc2_maize : 368.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (loc_os03g02680.2 : 359.0) no description available & (at3g48750 : 353.0) A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (chl4|510572 : 344.0) no description available & (gnl|cdd|29142 : 267.0) no description available & (ipr017442 : 156.31342) no description available & (reliability: 706.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CDKA2 PE=3 SV=1)'" P '31.3' 'cell.cycle' 'tr|b7g0j8|b7g0j8_phatc' "'(gnl|cdd|38300 : 333.0) no description available & (chl4|518721 : 280.0) no description available & (gnl|cdd|48213 : 273.0) no description available & (loc_os03g62490.1 : 265.0) no description available & (at1g03860 : 247.0) prohibitin 2; prohibitin 2 (PHB2); INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 7 (TAIR:AT5G44140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr001107 : 44.690723) Band 7 protein & (reliability: 494.0) & (original description: Prohibitin-like protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12799 PE=4 SV=1)'" P '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'tr|b5y4h4|b5y4h4_phatc' "'(gnl|cdd|29397 : 271.0) no description available & (loc_os06g49480.1 : 259.0) no description available & (at3g55920 : 258.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16458 Blast hits to 16421 proteins in 2673 species: Archae - 109; Bacteria - 6881; Metazoa - 2905; Fungi - 1389; Plants - 1283; Viruses - 4; Other Eukaryotes - 3887 (source: NCBI BLink). & (chl4|523573 : 257.0) no description available & (gnl|cdd|35766 : 247.0) no description available & (q39613|cyph_catro : 225.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (ipr002130 : 162.12256) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 516.0) & (original description: Peptidyl-prolyl cis-trans isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_18458 PE=3 SV=1)'" P '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'tr|b7gac9|b7gac9_phatc' "'(gnl|cdd|29397 : 272.0) no description available & (gnl|cdd|35766 : 264.0) no description available & (chl4|511605 : 218.0) no description available & (loc_os06g11320.2 : 203.0) no description available & (o49886|cyph_luplu : 198.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Lupinus luteus (European yellow lupin) & (at2g21130 : 191.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 1 (TAIR:AT4G38740.1); Has 16606 Blast hits to 16571 proteins in 2692 species: Archae - 108; Bacteria - 6886; Metazoa - 2917; Fungi - 1384; Plants - 1286; Viruses - 4; Other Eukaryotes - 4021 (source: NCBI BLink). & (ipr002130 : 172.05203) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 382.0) & (original description: Peptidylprolyl isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23164 PE=4 SV=1)'" P '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'tr|b7fx39|b7fx39_phatc' "'(gnl|cdd|29397 : 268.0) no description available & (gnl|cdd|35334 : 254.0) no description available & (q39613|cyph_catro : 219.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (chl4|511384 : 218.0) no description available & (at4g34870 : 216.0) belongs to cyclophilin family; rotamase cyclophilin 5 (ROC5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1); Has 16787 Blast hits to 16755 proteins in 2701 species: Archae - 108; Bacteria - 6977; Metazoa - 2940; Fungi - 1375; Plants - 1301; Viruses - 4; Other Eukaryotes - 4082 (source: NCBI BLink). & (loc_os09g39780.2 : 209.0) no description available & (ipr002130 : 173.96684) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 432.0) & (original description: Peptidyl-prolyl cis-trans isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34933 PE=3 SV=1)'" P '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'tr|b7fqt3|b7fqt3_phatc' "'(gnl|cdd|29397 : 278.0) no description available & (gnl|cdd|35334 : 263.0) no description available & (q39613|cyph_catro : 231.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (chl4|510648 : 219.0) no description available & (at4g34870 : 218.0) belongs to cyclophilin family; rotamase cyclophilin 5 (ROC5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1); Has 16787 Blast hits to 16755 proteins in 2701 species: Archae - 108; Bacteria - 6977; Metazoa - 2940; Fungi - 1375; Plants - 1301; Viruses - 4; Other Eukaryotes - 4082 (source: NCBI BLink). & (loc_os09g39780.2 : 217.0) no description available & (ipr002130 : 167.99341) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 436.0) & (original description: Peptidyl-prolyl cis-trans isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43152 PE=3 SV=1)'" P '31.3.1' 'cell.cycle.peptidylprolyl isomerase' 'tr|b7fpa7|b7fpa7_phatc' "'(gnl|cdd|29397 : 242.0) no description available & (gnl|cdd|36098 : 218.0) no description available & (loc_os06g49480.1 : 207.0) no description available & (chl4|523573 : 198.0) no description available & (at2g29960 : 196.0) encodes a cyclophilin protein that exhibits peptidylprolyl cis/trans-isomerase and protein refolding activities that were sensitive to cyclosporin A. The protein interacts with GNOM in vitro and is localized to both the cytosolic and membrane fractions. The gene is expressed in the developing embryo.; cyclophilin 5 (CYP5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cytosol, Golgi stack, endoplasmic reticulum, membrane fraction, multivesicular body; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 7 (TAIR:AT5G58710.1); Has 15750 Blast hits to 15712 proteins in 2648 species: Archae - 109; Bacteria - 6497; Metazoa - 2918; Fungi - 1356; Plants - 1258; Viruses - 4; Other Eukaryotes - 3608 (source: NCBI BLink). & (q41651|cypb_vicfa : 196.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (ipr002130 : 156.86346) Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain & (reliability: 392.0) & (original description: Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9011 PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fy75|b7fy75_phatc' "'(ipr011989 : 1500.0) Armadillo-like helical & (gnl|cdd|36293 : 703.0) no description available & (at5g22770 : 528.0) alpha-adaptin (alpha-ADR); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: male gametophyte, pollen tube, leaf; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Adaptor protein complex AP-2, alpha subunit (InterPro:IPR017104), Armadillo-like helical (InterPro:IPR011989), Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain (InterPro:IPR013038), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain (InterPro:IPR003164), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-2, alpha subunit (TAIR:AT5G22780.1); Has 2529 Blast hits to 2470 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 987; Fungi - 687; Plants - 265; Viruses - 0; Other Eukaryotes - 590 (source: NCBI BLink). & (loc_os03g02150.2 : 454.0) no description available & (chl4|512605 : 379.0) no description available & (gnl|cdd|85562 : 282.0) no description available & (reliability: 1419.8015) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AP1alpha PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g4y3|b7g4y3_phatc' "'(gnl|cdd|36203 : 1807.0) no description available & (ipr011990 : 1500.0) Tetratricopeptide-like helical & (loc_os11g01380.1 : 1486.0) no description available & (at3g08530 : 1466.0) Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G11130.1); Has 1511 Blast hits to 1401 proteins in 489 species: Archae - 2; Bacteria - 31; Metazoa - 879; Fungi - 167; Plants - 128; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink). & (chl4|519013 : 1400.0) no description available & (gnl|cdd|84918 : 99.0) no description available & (reliability: 2932.0) & (original description: Clathrin heavy chain OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CHC PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g374|b7g374_phatc' "'(gnl|cdd|36279 : 438.0) no description available & (at5g11490 : 431.0) adaptin family protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (loc_os01g43630.2 : 382.0) no description available & (ipr011989 : 266.7634) Armadillo-like helical & (gnl|cdd|85562 : 248.0) no description available & (chl4|512373 : 163.0) no description available & (reliability: 1164.5615) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=AP4beta PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fzv8|b7fzv8_phatc' "'(gnl|cdd|36276 : 885.0) no description available & (at4g31490 : 740.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31480.2); Has 2805 Blast hits to 2731 proteins in 309 species: Archae - 0; Bacteria - 0; Metazoa - 1207; Fungi - 640; Plants - 392; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). & (chl4|521716 : 739.0) no description available & (loc_os11g07280.1 : 707.0) no description available & (gnl|cdd|71159 : 298.0) no description available & (ipr011710 : 221.72151) Coatomer, beta subunit, C-terminal & (reliability: 1752.979) & (original description: Coatomer subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=COPbeta PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fzs9|b7fzs9_phatc' "'(ipr006692 : 1500.0) Coatomer, WD associated region & (gnl|cdd|35497 : 1054.0) no description available & (loc_os06g05180.2 : 935.0) no description available & (at1g79990 : 924.0) structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Coatomer, beta' subunit (InterPro:IPR016453), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74269 Blast hits to 32109 proteins in 811 species: Archae - 56; Bacteria - 8450; Metazoa - 29737; Fungi - 16170; Plants - 9747; Viruses - 0; Other Eukaryotes - 10109 (source: NCBI BLink). & (chl4|519381 : 894.0) no description available & (gnl|cdd|67661 : 393.0) no description available & (p93107|pf20_chlre : 86.3) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 4473.0) & (original description: Coatomer subunit beta' OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=COPbeta2 PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7gay9|b7gay9_phatc' "'(gnl|cdd|37846 : 400.0) no description available & (chl4|518743 : 323.0) no description available & (at5g05010 : 252.0) clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Longin-like (InterPro:IPR011012); Has 717 Blast hits to 709 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 237; Fungi - 248; Plants - 88; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (loc_os05g24601.1 : 178.0) no description available & (p49661|copd_orysa : 171.0) Coatomer subunit delta (Delta-coat protein) (Delta-COP) (Archain) - Oryza sativa (Rice) & (gnl|cdd|85129 : 57.0) no description available & (reliability: 504.0) & (original description: Coatomer subunit delta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=COPdelta PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b5y4t4|b5y4t4_phatc' "'(gnl|cdd|36294 : 849.0) no description available & (at4g34450 : 709.0) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink). & (loc_os07g10150.1 : 697.0) no description available & (chl4|524114 : 646.0) no description available & (gnl|cdd|34837 : 515.0) no description available & (ipr011989 : 206.31636) Armadillo-like helical & (reliability: 1771.7756) & (original description: Coatomer subunit gamma OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=COPgamma PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fuj7|b7fuj7_phatc' "'(gnl|cdd|68311 : 168.0) no description available & (gnl|cdd|38291 : 155.0) no description available & (ipr006822 : 119.47206) Coatomer, epsilon subunit & (chl4|514797 : 109.0) no description available & (at1g30630 : 104.0) Coatomer epsilon subunit; FUNCTIONS IN: protein transporter activity, structural molecule activity, binding; INVOLVED IN: retrograde vesicle-mediated transport, Golgi to ER; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Coatomer, epsilon subunit (InterPro:IPR006822); BEST Arabidopsis thaliana protein match is: Coatomer epsilon subunit (TAIR:AT2G34840.1); Has 442 Blast hits to 442 proteins in 180 species: Archae - 6; Bacteria - 14; Metazoa - 175; Fungi - 90; Plants - 92; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (loc_os04g55200.1 : 101.0) no description available & (reliability: 417.0761) & (original description: Coatomer subunit epsilon OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=COPIepsilon PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b5y3g8|b5y3g8_phatc' "'(ipr011989 : 1500.0) Armadillo-like helical & (gnl|cdd|36280 : 665.0) no description available & (at1g23900 : 600.0) Encodes large subunit of the heterotetrameric adaptor protein complex AP-1. AP-1 is required for clathrin coated vesicles budding from the trans-Golgi network or plasma membrane; gamma-adaptin 1 (GAMMA-ADAPTIN 1); FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: vesicle-mediated transport; LOCATED IN: AP-1 adaptor complex; CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit (InterPro:IPR017107), Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Clathrin adaptor, gamma-adaptin, appendage (InterPro:IPR008153), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 3543 Blast hits to 3448 proteins in 308 species: Archae - 0; Bacteria - 4; Metazoa - 1517; Fungi - 967; Plants - 387; Viruses - 0; Other Eukaryotes - 668 (source: NCBI BLink). & (loc_os06g07090.2 : 577.0) no description available & (chl4|516592 : 506.0) no description available & (gnl|cdd|85562 : 340.0) no description available & (reliability: 1649.1144) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_13511 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7gdg1|b7gdg1_phatc' "'(gnl|cdd|36077 : 79.5) no description available & (at5g22360 : 60.1) Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.; vesicle-associated membrane protein 714 (VAMP714); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: Golgi apparatus, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2317 Blast hits to 2315 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 867; Fungi - 487; Plants - 553; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (chl4|522190 : 58.9) no description available & (gnl|cdd|85150 : 58.7) no description available & (loc_os07g14540.1 : 54.7) no description available & (ipr001388 : 45.789337) Synaptobrevin & (reliability: 120.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16798 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7gdy1|b7gdy1_phatc' "'(loc_os01g68750.1 : 390.0) no description available & (at1g31730 : 377.0) Adaptin family protein; FUNCTIONS IN: clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Adaptor protein complex AP-4, epsilon subunit (InterPro:IPR017109), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 4728 Blast hits to 3440 proteins in 365 species: Archae - 0; Bacteria - 98; Metazoa - 1563; Fungi - 860; Plants - 412; Viruses - 3; Other Eukaryotes - 1792 (source: NCBI BLink). & (gnl|cdd|36280 : 370.0) no description available & (chl4|524098 : 337.0) no description available & (ipr011989 : 280.03992) Armadillo-like helical & (gnl|cdd|85562 : 177.0) no description available & (reliability: 985.52) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16891 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g4z7|b7g4z7_phatc' "'(gnl|cdd|35513 : 1334.0) no description available & (chl4|514240 : 1038.0) no description available & (at2g21390 : 1013.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 80927 Blast hits to 31058 proteins in 786 species: Archae - 62; Bacteria - 8761; Metazoa - 33547; Fungi - 17467; Plants - 10193; Viruses - 0; Other Eukaryotes - 10897 (source: NCBI BLink). & (loc_os09g04110.2 : 998.0) no description available & (gnl|cdd|67661 : 403.0) no description available & (ipr006692 : 238.3057) Coatomer, WD associated region & (p93107|pf20_chlre : 120.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 2443.035) & (original description: Coatomer subunit alpha OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21929 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7gbr9|b7gbr9_phatc' "'(gnl|cdd|36879 : 78.8) no description available & (at1g26670 : 58.9) member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.; VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (gnl|cdd|68577 : 55.7) no description available & (loc_os01g51120.1 : 53.9) no description available & (chl4|514483 : 48.9) no description available & (reliability: 117.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40521 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fqr3|b7fqr3_phatc' "'(gnl|cdd|35652 : 88.2) no description available & (at1g21660 : 76.6) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.1); Has 3482 Blast hits to 1316 proteins in 282 species: Archae - 0; Bacteria - 662; Metazoa - 522; Fungi - 399; Plants - 281; Viruses - 8; Other Eukaryotes - 1610 (source: NCBI BLink). & (loc_os01g25320.1 : 73.9) no description available & (chl4|513092 : 65.9) no description available & (ipr001623 : 41.862045) Heat shock protein DnaJ, N-terminal & (gnl|cdd|84229 : 40.7) no description available & (reliability: 141.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43133 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fvp9|b7fvp9_phatc' "'(loc_os05g48020.1 : 60.5) no description available & (chl4|518959 : 59.7) no description available & (at3g09740 : 53.1) syntaxin of plants 71 (SYP71); syntaxin of plants 71 (SYP71); FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, protein targeting to membrane; LOCATED IN: integral to membrane, endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 72 (TAIR:AT3G45280.1); Has 541 Blast hits to 539 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 116; Plants - 188; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). & (gnl|cdd|38412 : 41.8) no description available & (gnl|cdd|86938 : 37.1) no description available & (reliability: 106.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44804 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fxk1|b7fxk1_phatc' "'(at5g07120 : 78.6) Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.; sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). & (gnl|cdd|37484 : 74.8) no description available & (gnl|cdd|85027 : 67.0) no description available & (chl4|510496 : 63.9) no description available & (loc_os01g64280.1 : 50.4) no description available & (ipr001683 : 37.63987) Phox homologous domain & (reliability: 155.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45401 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fyp3|b7fyp3_phatc' "'(gnl|cdd|82909 : 39.3) no description available & (gnl|cdd|38895 : 37.3) no description available & (at3g10380 : 35.8) Subunit of the Putative Arabidopsis Exocyst Complex; subunit of exocyst complex 8 (SEC8); INVOLVED IN: pollen germination, mucilage biosynthetic process involved in seed coat development, pollen tube growth; LOCATED IN: cytosol, plasma membrane, exocyst; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec8 exocyst complex component specific domain (InterPro:IPR007191); Has 454 Blast hits to 346 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 133; Plants - 50; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45792 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g0t9|b7g0t9_phatc' "'(gnl|cdd|86276 : 57.5) no description available & (gnl|cdd|38352 : 50.6) no description available & (chl4|510864 : 40.4) no description available & (at1g55190 : 39.3) PRA7; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prenylated rab acceptor PRA1 (InterPro:IPR004895); BEST Arabidopsis thaliana protein match is: PRA1 (Prenylated rab acceptor) family protein (TAIR:AT3G13720.1); Has 523 Blast hits to 523 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 90; Plants - 309; Viruses - 6; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 78.6) & (original description: PRA1 family protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46321 PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g8v3|b7g8v3_phatc' "'(gnl|cdd|84916 : 74.6) no description available & (loc_os04g45190.3 : 72.8) no description available & (gnl|cdd|35660 : 63.0) no description available & (at4g00170 : 58.5) Plant VAMP (vesicle-associated membrane protein) family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1100 Blast hits to 1071 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 430; Fungi - 141; Plants - 437; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (chl4|521426 : 53.9) no description available & (ipr008962 : 49.52547) PapD-like & (reliability: 107.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48918 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g5z1|b7g5z1_phatc' "'(gnl|cdd|36879 : 51.8) no description available & (loc_os06g50120.1 : 44.3) no description available & (chl4|514483 : 40.0) no description available & (gnl|cdd|47709 : 39.7) no description available & (at1g26670 : 38.1) member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.; VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 76.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54855 PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7s4c6|b7s4c6_phatc' "'(ipr011989 : 1500.0) Armadillo-like helical & (at4g23460 : 873.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G11380.1); Has 3513 Blast hits to 3431 proteins in 288 species: Archae - 10; Bacteria - 22; Metazoa - 1477; Fungi - 873; Plants - 441; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink). & (loc_os03g23950.1 : 802.0) no description available & (gnl|cdd|36279 : 742.0) no description available & (gnl|cdd|85562 : 459.0) no description available & (chl4|512373 : 317.0) no description available & (reliability: 4371.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PtAP1/2beta PE=4 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7g495|b7g495_phatc' "'(gnl|cdd|36079 : 236.0) no description available & (chl4|517683 : 206.0) no description available & (at5g58060 : 204.0) member of YKT6 Gene Family; YKT61; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Synaptobrevin (InterPro:IPR001388), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Synaptobrevin family protein (TAIR:AT5G58180.2); Has 1363 Blast hits to 1363 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 381; Fungi - 253; Plants - 448; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). & (loc_os01g73300.1 : 194.0) no description available & (gnl|cdd|34744 : 125.0) no description available & (ipr010908 : 104.61058) Longin domain & (reliability: 408.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SybF PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fxt5|b7fxt5_phatc' "'(gnl|cdd|36028 : 145.0) no description available & (gnl|cdd|34678 : 86.6) no description available & (loc_os06g39050.1 : 77.0) no description available & (chl4|514716 : 72.8) no description available & (at1g61290 : 70.9) member of SYP12 Gene Family; syntaxin of plants 124 (SYP124); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 125 (TAIR:AT1G11250.1); Has 2975 Blast hits to 2948 proteins in 317 species: Archae - 21; Bacteria - 77; Metazoa - 1321; Fungi - 552; Plants - 504; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 141.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SytA PE=3 SV=1)'" P '31.4' 'cell.vesicle transport' 'tr|b7fye7|b7fye7_phatc' "'(gnl|cdd|36514 : 351.0) no description available & (gnl|cdd|85171 : 288.0) no description available & (ipr001619 : 260.5346) Sec1-like protein & (at4g12120 : 226.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 223.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (loc_os06g04450.2 : 223.0) no description available & (chl4|513293 : 105.0) no description available & (reliability: 448.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UNC18 PE=3 SV=1)'" P '31.99' 'cell.unspecified' 'tr|b7g862|b7g862_phatc' "'(gnl|cdd|37450 : 153.0) no description available & (loc_os01g71230.1 : 114.0) no description available & (at3g12390 : 107.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (chl4|515712 : 104.0) no description available & (gnl|cdd|65629 : 66.5) no description available & (ipr002715 : 42.916206) Nascent polypeptide-associated complex NAC & (reliability: 204.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48728 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fsv2|b7fsv2_phatc' "'(gnl|cdd|36541 : 304.0) no description available & (chl4|520858 : 238.0) no description available & (at1g08860 : 236.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (loc_os02g32160.2 : 229.0) no description available & (gnl|cdd|29232 : 198.0) no description available & (ipr010734 : 66.94932) Copine & (reliability: 436.0) & (original description: Copine 1 (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CPNE1b PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fqk5|b7fqk5_phatc' "'(gnl|cdd|36767 : 163.0) no description available & (chl4|519750 : 131.0) no description available & (at1g71230 : 127.0) Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses.; COP9-signalosome 5B (CSN5B); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome 5A (TAIR:AT1G22920.1); Has 1278 Blast hits to 1275 proteins in 253 species: Archae - 0; Bacteria - 6; Metazoa - 459; Fungi - 394; Plants - 243; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (loc_os04g56070.2 : 117.0) no description available & (gnl|cdd|85425 : 85.0) no description available & (reliability: 254.0) & (original description: COP9 SigNalosome subunit 5 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CSN5 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fr44|b7fr44_phatc' "'(gnl|cdd|35485 : 472.0) no description available & (chl4|513332 : 420.0) no description available & (at5g58230 : 403.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g43890.1 : 387.0) no description available & (ipr015943 : 133.57014) WD40/YVTN repeat-like-containing domain & (gnl|cdd|29257 : 121.0) no description available & (p93107|pf20_chlre : 66.6) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 806.0) & (original description: Chromatin assembly factor subunit c OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NURF-55 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b5y447|b5y447_phatc' "'(gnl|cdd|85059 : 111.0) no description available & (ipr011323 : 90.51417) Mss4/translationally controlled tumour-associated TCTP & (gnl|cdd|36938 : 88.5) no description available & (q9m5g3|tctp_horvu : 81.6) Translationally-controlled tumor protein homolog (TCTP) (HTP) - Hordeum vulgare (Barley) & (loc_os11g43900.1 : 72.8) no description available & (at3g16640 : 64.7) Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.; translationally controlled tumor protein (TCTP); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: Methionine sulfoxide reductase (MSS4-like) family protein (TAIR:AT3G05540.1); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 129.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46897 PE=3 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g1z1|b7g1z1_phatc' "'(gnl|cdd|36541 : 296.0) no description available & (chl4|520858 : 271.0) no description available & (at1g08860 : 233.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (loc_os02g32160.2 : 221.0) no description available & (gnl|cdd|29232 : 206.0) no description available & (ipr010734 : 72.4888) Copine & (reliability: 422.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_13587 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fwc9|b7fwc9_phatc' "'(ipr010339 : 1500.0) TIP49, C-terminal & (gnl|cdd|37153 : 615.0) no description available & (gnl|cdd|31417 : 529.0) no description available & (at5g22330 : 484.0) RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1); FUNCTIONS IN: protein binding; INVOLVED IN: meristem development, regulation of defense response to fungus, incompatible interaction; LOCATED IN: nucleolus, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 3940 Blast hits to 3882 proteins in 1253 species: Archae - 399; Bacteria - 2038; Metazoa - 370; Fungi - 432; Plants - 137; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink). & (loc_os07g08170.1 : 484.0) no description available & (chl4|526379 : 484.0) no description available & (q5z9s8|pdr12_orysa : 45.4) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 968.0) & (original description: RuvB-like helicase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19568 PE=3 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g365|b7g365_phatc' "'(p25387|gblp_chlre : 439.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (chl4|514942 : 439.0) no description available & (gnl|cdd|35500 : 417.0) no description available & (at3g18130 : 404.0) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.; receptor for activated C kinase 1C (RACK1C_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: nucleolus, heterotrimeric G-protein complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 88582 Blast hits to 37057 proteins in 965 species: Archae - 74; Bacteria - 10338; Metazoa - 34853; Fungi - 20136; Plants - 11319; Viruses - 6; Other Eukaryotes - 11856 (source: NCBI BLink). & (loc_os05g47890.1 : 404.0) no description available & (gnl|cdd|29257 : 226.0) no description available & (ipr015943 : 169.98582) WD40/YVTN repeat-like-containing domain & (reliability: 782.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28694 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g5m1|b7g5m1_phatc' "'(gnl|cdd|35499 : 298.0) no description available & (loc_os02g11060.1 : 271.0) no description available & (at1g15470 : 268.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species: Archae - 64; Bacteria - 7048; Metazoa - 15440; Fungi - 9730; Plants - 4355; Viruses - 0; Other Eukaryotes - 5016 (source: NCBI BLink). & (chl4|523944 : 232.0) no description available & (gnl|cdd|29257 : 130.0) no description available & (ipr015943 : 124.83389) WD40/YVTN repeat-like-containing domain & (q40507|gbb3_tobac : 65.9) Guanine nucleotide-binding protein subunit beta - Nicotiana tabacum (Common tobacco) & (reliability: 492.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29212 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fzr5|b7fzr5_phatc' "'(gnl|cdd|39873 : 201.0) no description available & (at1g79280 : 107.0) Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.; nuclear pore anchor (NUA); CONTAINS InterPro DOMAIN/s: Tetratricopeptide, MLP1/MLP2-like (InterPro:IPR012929). & (gnl|cdd|31389 : 90.9) no description available & (loc_os05g46030.1 : 60.5) no description available & (chl4|521722 : 45.8) no description available & (reliability: 214.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35556 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7gan1|b7gan1_phatc' "'(at2g38670 : 325.0) Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.; phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink). & (gnl|cdd|38014 : 320.0) no description available & (loc_os10g24810.1 : 317.0) no description available & (chl4|513669 : 301.0) no description available & (gnl|cdd|28836 : 188.0) no description available & (ipr014729 : 136.43234) Rossmann-like alpha/beta/alpha sandwich fold & (reliability: 650.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40163 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fpt6|b7fpt6_phatc' '(gnl|cdd|37387 : 71.5) no description available & (gnl|cdd|67697 : 58.4) no description available & (at3g56640 : 47.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; exocyst complex component sec15A (SEC15A); CONTAINS InterPro DOMAIN/s: Exocyst complex subunit Sec15-like (InterPro:IPR007225); BEST Arabidopsis thaliana protein match is: exocyst complex component sec15B (TAIR:AT4G02350.1); Has 442 Blast hits to 436 proteins in 182 species: Archae - 3; Bacteria - 0; Metazoa - 174; Fungi - 134; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (loc_os10g27990.1 : 46.6) no description available & (reliability: 94.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42858 PE=4 SV=1)' P '33.99' 'development.unspecified' 'tr|b7fy56|b7fy56_phatc' "'(gnl|cdd|35524 : 357.0) no description available & (gnl|cdd|87748 : 170.0) no description available & (ipr015049 : 92.17597) Domain of unknown function DUF1900 & (q39336|gblp_brana : 68.9) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (at1g18080 : 67.0) Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene.; ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). & (chl4|512570 : 64.3) no description available & (loc_os01g49290.1 : 62.4) no description available & (reliability: 134.0) & (original description: Coronin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45580 PE=3 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fyi1|b7fyi1_phatc' "'(at4g20270 : 108.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.; BARELY ANY MERISTEM 3 (BAM3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: regulation of meristem growth, protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, leaf development, floral organ development; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G65700.2); Has 219938 Blast hits to 139586 proteins in 4977 species: Archae - 151; Bacteria - 21929; Metazoa - 70277; Fungi - 10656; Plants - 90391; Viruses - 423; Other Eukaryotes - 26111 (source: NCBI BLink). & (p93194|rpk1_iponi : 105.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (loc_os10g02970.1 : 94.4) no description available & (gnl|cdd|78817 : 72.1) no description available & (gnl|cdd|35481 : 69.2) no description available & (chl4|517964 : 62.8) no description available & (reliability: 216.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45679 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g0s3|b7g0s3_phatc' "'(gnl|cdd|36541 : 85.8) no description available & (chl4|520858 : 73.9) no description available & (loc_os02g32160.2 : 61.2) no description available & (at1g08860 : 56.6) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (gnl|cdd|47568 : 51.3) no description available & (reliability: 104.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46304 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g1z9|b7g1z9_phatc' "'(gnl|cdd|36800 : 171.0) no description available & (ipr015943 : 85.27903) WD40/YVTN repeat-like-containing domain & (p27766|dyi3_chlre : 68.9) Dynein, 70 kDa intermediate chain, flagellar outer arm (IC69) (IC70) - Chlamydomonas reinhardtii & (chl4|512971 : 68.9) no description available & (gnl|cdd|29257 : 65.0) no description available & (at5g23730 : 42.7) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1); Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16; Bacteria - 2654; Metazoa - 3890; Fungi - 2899; Plants - 1307; Viruses - 0; Other Eukaryotes - 1524 (source: NCBI BLink). & (loc_os08g44010.5 : 41.2) no description available & (reliability: 85.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46969 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g6y0|b7g6y0_phatc' "'(gnl|cdd|35539 : 385.0) no description available & (at3g18060 : 221.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink). & (loc_os01g03510.1 : 199.0) no description available & (ipr015943 : 169.08296) WD40/YVTN repeat-like-containing domain & (gnl|cdd|29257 : 122.0) no description available & (chl4|525304 : 73.6) no description available & (q39336|gblp_brana : 51.6) Guanine nucleotide-binding protein subunit beta-like protein - Brassica napus (Rape) & (reliability: 442.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48381 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7g909|b7g909_phatc' '(gnl|cdd|38949 : 55.3) no description available & (gnl|cdd|70844 : 48.4) no description available & (at3g56530 : 35.0) NAC domain containing protein 64 (NAC064); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 93 (TAIR:AT5G39690.1); Has 2590 Blast hits to 2582 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2590; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 70.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48959 PE=4 SV=1)' P '33.99' 'development.unspecified' 'tr|b7gcf6|b7gcf6_phatc' "'(at5g41790 : 47.8) encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light.; COP1-interactive protein 1 (CIP1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of protein import into nucleus; LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|37213 : 40.0) no description available & (gnl|cdd|34081 : 37.8) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49956 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fq42|b7fq42_phatc' "'(gnl|cdd|36541 : 311.0) no description available & (chl4|520858 : 254.0) no description available & (at5g61900 : 237.0) Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.; BONZAI 1 (BON1); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: in 7 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g32160.2 : 226.0) no description available & (gnl|cdd|29232 : 210.0) no description available & (ipr010734 : 74.99206) Copine & (reliability: 468.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_8678 PE=4 SV=1)'" P '33.99' 'development.unspecified' 'tr|b7fye7|b7fye7_phatc' "'(gnl|cdd|36514 : 351.0) no description available & (gnl|cdd|85171 : 288.0) no description available & (ipr001619 : 260.5346) Sec1-like protein & (at4g12120 : 226.0) member of KEULE Gene Family; SEC1B; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT1G12360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5vnu3|sec1b_orysa : 223.0) Probable protein transport Sec1b - Oryza sativa (Rice) & (loc_os06g04450.2 : 223.0) no description available & (chl4|513293 : 105.0) no description available & (reliability: 436.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UNC18 PE=3 SV=1)'" P '34.1' 'transport.p- and v-ATPases' 'tr|b7gcd8|b7gcd8_phatc' "'(chl4|526295 : 707.0) no description available & (gnl|cdd|30822 : 683.0) no description available & (gnl|cdd|35423 : 618.0) no description available & (loc_os03g17310.1 : 343.0) no description available & (at1g10130 : 328.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (ipr023298 : 262.0247) ATPase, P-type, transmembrane domain & (q8run1|aca3_orysa : 244.0) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 680.0286) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23629 PE=3 SV=1)'" P '34.1' 'transport.p- and v-ATPases' 'tr|b7g162|b7g162_phatc' "'(gnl|cdd|36566 : 904.0) no description available & (gnl|cdd|31349 : 794.0) no description available & (at1g78900 : 776.0) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.; vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit A (InterPro:IPR005725); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39291|vata_brana : 776.0) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) (Tonoplast ATPase 70 kDa subunit) (BN59) - Brassica napus (Rape) & (loc_os02g07870.1 : 774.0) no description available & (chl4|510471 : 768.0) no description available & (ipr000194 : 235.80528) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain & (reliability: 1552.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27923 PE=3 SV=1)'" P '34.1' 'transport.p- and v-ATPases' 'tr|b7g3i2|b7g3i2_phatc' "'(ipr002490 : 1500.0) ATPase, V0/A0 complex subunit a & (gnl|cdd|37400 : 747.0) no description available & (gnl|cdd|85492 : 508.0) no description available & (at2g21410 : 475.0) Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.; vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink). & (loc_os10g10500.1 : 463.0) no description available & (chl4|522062 : 397.0) no description available & (reliability: 950.0) & (original description: V-type proton ATPase subunit a OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28794 PE=3 SV=1)'" P '34.1' 'transport.p- and v-ATPases' 'tr|b7fts7|b7fts7_phatc' "'(gnl|cdd|86278 : 262.0) no description available & (gnl|cdd|38120 : 225.0) no description available & (ipr004907 : 177.4975) ATPase, V1 complex, subunit C & (chl4|522824 : 166.0) no description available & (loc_os05g51530.2 : 159.0) no description available & (at1g12840 : 154.0) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8.; DE-ETIOLATED 3 (DET3); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: lignin biosynthetic process, regulation of carbohydrate biosynthetic process, unidimensional cell growth; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1 complex, subunit C (InterPro:IPR004907); Has 563 Blast hits to 541 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 263; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (q9scb9|vatc_horvu : 120.0) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit) - Hordeum vulgare (Barley) & (reliability: 618.6206) & (original description: V-type proton ATPase subunit C OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55482 PE=3 SV=1)'" P '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'tr|b5y3h8|b5y3h8_phatc' "'(gnl|cdd|38168 : 354.0) no description available & (q8ru33|va0d_orysa : 308.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (loc_os01g40470.1 : 308.0) no description available & (at3g28710 : 303.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: cultured cell, callus; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28715.1); Has 631 Blast hits to 630 proteins in 306 species: Archae - 16; Bacteria - 2; Metazoa - 293; Fungi - 153; Plants - 74; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (chl4|520993 : 290.0) no description available & (gnl|cdd|85820 : 237.0) no description available & (ipr002843 : 150.32196) ATPase, V0/A0 complex, subunit C/D & (reliability: 606.0) & (original description: V-type proton ATPase subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21030 PE=3 SV=1)'" P '34.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase' 'tr|b7g7x7|b7g7x7_phatc' "'(gnl|cdd|36877 : 147.0) no description available & (at4g11150 : 130.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g46980.1 : 127.0) no description available & (o23948|vate_goshi : 120.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85819 : 119.0) no description available & (chl4|517819 : 115.0) no description available & (ipr002842 : 97.236206) ATPase, V1/A1 complex, subunit E & (reliability: 250.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29711 PE=4 SV=1)'" P '34.1.1.1' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B' 'tr|b7fqq8|b7fqq8_phatc' "'(gnl|cdd|36565 : 838.0) no description available & (chl4|518466 : 726.0) no description available & (q40079|vatb2_horvu : 724.0) Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2) - Hordeum vulgare (Barley) & (loc_os06g37180.1 : 723.0) no description available & (at1g76030 : 722.0) Encodes the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus.; ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to cadmium ion, glucose mediated signaling pathway; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G20260.1); Has 40608 Blast hits to 39489 proteins in 9699 species: Archae - 963; Bacteria - 21151; Metazoa - 1673; Fungi - 795; Plants - 8192; Viruses - 0; Other Eukaryotes - 7834 (source: NCBI BLink). & (gnl|cdd|31350 : 716.0) no description available & (ipr000194 : 134.62874) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain & (reliability: 1444.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24978 PE=3 SV=1)'" P '34.1.1.3' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit D' 'tr|b7g360|b7g360_phatc' "'(gnl|cdd|36860 : 208.0) no description available & (gnl|cdd|65595 : 152.0) no description available & (chl4|526191 : 136.0) no description available & (at3g58730 : 135.0) vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit D (InterPro:IPR002699); Has 1576 Blast hits to 1575 proteins in 678 species: Archae - 260; Bacteria - 676; Metazoa - 232; Fungi - 148; Plants - 90; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (loc_os04g55040.2 : 130.0) no description available & (ipr002699 : 128.02847) V-type ATPase subunit D & (reliability: 270.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51058 PE=3 SV=1)'" P '34.1.1.4' 'transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit E' 'tr|b7g7x7|b7g7x7_phatc' "'(gnl|cdd|36877 : 147.0) no description available & (at4g11150 : 130.0) Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis.; vacuolar ATP synthase subunit E1 (TUF); FUNCTIONS IN: proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: in 7 processes; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 18 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V1/A1 complex, subunit E (InterPro:IPR002842); BEST Arabidopsis thaliana protein match is: vacuolar H+-ATPase subunit E isoform 3 (TAIR:AT1G64200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os01g46980.1 : 127.0) no description available & (o23948|vate_goshi : 120.0) Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) - Gossypium hirsutum (Upland cotton) & (gnl|cdd|85819 : 119.0) no description available & (chl4|517819 : 115.0) no description available & (ipr002842 : 97.236206) ATPase, V1/A1 complex, subunit E & (reliability: 260.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29711 PE=4 SV=1)'" P '34.12' 'transport.metal' 'tr|b7s441|b7s441_phatc' "'(gnl|cdd|36521 : 134.0) no description available & (gnl|cdd|30876 : 94.5) no description available & (chl4|515495 : 50.1) no description available & (loc_os03g08230.1 : 48.1) no description available & (ipr004837 : 46.9192) Sodium/calcium exchanger membrane region & (at5g17860 : 42.4) calcium exchanger 7 (CAX7); FUNCTIONS IN: cation:cation antiporter activity, calcium:sodium antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 163.7086) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1680 PE=3 SV=1)'" P '34.14' 'transport.unspecified cations' 'tr|b7fzw5|b7fzw5_phatc' "'(gnl|cdd|37559 : 621.0) no description available & (at5g45380 : 588.0) DEGRADATION OF UREA 3 (DUR3); CONTAINS InterPro DOMAIN/s: Sodium/solute symporter, subgroup (InterPro:IPR019900), Sodium/solute symporter (InterPro:IPR001734); Has 9388 Blast hits to 9377 proteins in 1702 species: Archae - 173; Bacteria - 6389; Metazoa - 719; Fungi - 340; Plants - 51; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink). & (loc_os10g42960.1 : 569.0) no description available & (chl4|525226 : 471.0) no description available & (gnl|cdd|30936 : 146.0) no description available & (reliability: 1176.0) & (original description: Urea transporter OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_20424 PE=3 SV=1)'" P '34.14' 'transport.unspecified cations' 'tr|b7g8y4|b7g8y4_phatc' "'(gnl|cdd|35968 : 337.0) no description available & (p04709|adt1_maize : 248.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (chl4|525806 : 248.0) no description available & (loc_os05g23720.1 : 246.0) no description available & (at4g28390 : 245.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|84566 : 91.5) no description available & (ipr018108 : 51.929836) Mitochondrial substrate/solute carrier & (reliability: 468.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22873 PE=3 SV=1)'" P '34.14' 'transport.unspecified cations' 'tr|b7fwq7|b7fwq7_phatc' "'(loc_os01g45750.2 : 250.0) no description available & (at2g26900 : 248.0) Sodium Bile acid symporter family; FUNCTIONS IN: transporter activity, bile acid:sodium symporter activity; INVOLVED IN: sodium ion transport, organic anion transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657), Bile acid transporter (InterPro:IPR004710); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT1G78560.1); Has 5023 Blast hits to 5015 proteins in 1109 species: Archae - 92; Bacteria - 2706; Metazoa - 448; Fungi - 4; Plants - 268; Viruses - 0; Other Eukaryotes - 1505 (source: NCBI BLink). & (gnl|cdd|30734 : 178.0) no description available & (chl4|517627 : 173.0) no description available & (gnl|cdd|37929 : 150.0) no description available & (ipr002657 : 74.853905) Bile acid:sodium symporter & (reliability: 496.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_3046 PE=4 SV=1)'" P '34.14' 'transport.unspecified cations' 'tr|b7gcn8|b7gcn8_phatc' '(chl4|510799 : 424.0) no description available & (gnl|cdd|30936 : 104.0) no description available & (gnl|cdd|37560 : 77.3) no description available & (ipr001734 : 46.0517) Sodium/solute symporter & (reliability: 80.59048) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50026 PE=3 SV=1)' P '34.15' 'transport.potassium' 'tr|b7g5k0|b7g5k0_phatc' "'(gnl|cdd|29261 : 60.1) no description available & (gnl|cdd|35729 : 53.5) no description available & (loc_os04g36740.1 : 52.4) no description available & (at2g25600 : 50.4) Encodes SPIK, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutant plants have impaired pollen-tube growth.; Shaker pollen inward K+ channel (SPIK); FUNCTIONS IN: inward rectifier potassium channel activity, cyclic nucleotide binding, potassium channel activity; INVOLVED IN: pollen tube growth; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 5 (TAIR:AT4G32500.1); Has 83148 Blast hits to 34215 proteins in 1581 species: Archae - 129; Bacteria - 8355; Metazoa - 40552; Fungi - 7952; Plants - 3977; Viruses - 1178; Other Eukaryotes - 21005 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 49.7) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (chl4|520815 : 47.8) no description available & (ipr020683 : 42.1805) Ankyrin repeat-containing domain & (reliability: 100.8) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14472 PE=4 SV=1)'" P '34.15' 'transport.potassium' 'tr|b7fqs2|b7fqs2_phatc' "'(gnl|cdd|31011 : 163.0) no description available & (ipr023210 : 135.0196) NADP-dependent oxidoreductase domain & (gnl|cdd|36788 : 116.0) no description available & (at1g04690 : 90.5) potassium channel beta subunit 1 (KAB1); FUNCTIONS IN: oxidoreductase activity, potassium channel activity; INVOLVED IN: oxidation reduction, potassium ion transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Potassium channel, voltage-dependent, beta subunit, KCNAB-related (InterPro:IPR005399); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60690.1); Has 29181 Blast hits to 29146 proteins in 2493 species: Archae - 642; Bacteria - 19972; Metazoa - 899; Fungi - 1968; Plants - 978; Viruses - 0; Other Eukaryotes - 4722 (source: NCBI BLink). & (q40648|kcab_orysa : 88.2) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (loc_os02g57240.1 : 88.2) no description available & (chl4|521720 : 67.4) no description available & (reliability: 181.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43140 PE=4 SV=1)'" P '34.15' 'transport.potassium' 'tr|b7fug7|b7fug7_phatc' "'(gnl|cdd|34669 : 63.5) no description available & (gnl|cdd|39754 : 63.5) no description available & (chl4|517834 : 49.7) no description available & (loc_os11g34860.3 : 47.0) no description available & (ipr019263 : 46.63152) Inorganic phosphate transporter Pho88 & (at2g43850 : 46.2) Integrin-linked protein kinase family; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: regulation of signal transduction, protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Integrin-linked protein kinase (InterPro:IPR016253), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Integrin-linked protein kinase family (TAIR:AT3G59830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 88.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44547 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7frb6|b7frb6_phatc' "'(gnl|cdd|35284 : 432.0) no description available & (loc_os03g06139.1 : 258.0) no description available & (chl4|513495 : 254.0) no description available & (at2g01320 : 249.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|72993 : 210.0) no description available & (q8gu86|pdr5_orysa : 196.0) Pleiotropic drug resistance protein 5 - Oryza sativa (Rice) & (ipr013525 : 76.3278) ABC-2 type transporter & (reliability: 498.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31433 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7g341|b7g341_phatc' "'(gnl|cdd|35278 : 517.0) no description available & (gnl|cdd|73008 : 382.0) no description available & (loc_os01g50160.1 : 335.0) no description available & (at4g18050 : 323.0) P-glycoprotein 9 (PGP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 7 (TAIR:AT5G46540.1); Has 831635 Blast hits to 388928 proteins in 4153 species: Archae - 14569; Bacteria - 650940; Metazoa - 17965; Fungi - 11827; Plants - 9524; Viruses - 32; Other Eukaryotes - 126778 (source: NCBI BLink). & (chl4|517616 : 312.0) no description available & (q6yuu5|mdr_orysa : 281.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (ipr001140 : 63.47913) ABC transporter, transmembrane domain & (reliability: 726.8956) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_21548 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7gbx2|b7gbx2_phatc' "'(at2g41700 : 732.0) ATP-binding cassette A1 (ABCA1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, amino acid transmembrane transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP-binding cassette A2 (TAIR:AT3G47730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|35282 : 415.0) no description available & (gnl|cdd|73022 : 313.0) no description available & (chl4|520453 : 226.0) no description available & (loc_os08g30740.1 : 224.0) no description available & (q9g4f5|cysa_cucsa : 105.0) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (ipr003439 : 36.435898) ABC transporter-like & (reliability: 1527.7628) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23497 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7g0t6|b7g0t6_phatc' "'(chl4|522118 : 763.0) no description available & (gnl|cdd|35285 : 438.0) no description available & (gnl|cdd|30834 : 270.0) no description available & (at1g64550 : 167.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (loc_os02g58020.2 : 154.0) no description available & (ipr011989 : 72.296425) Armadillo-like helical & (p56344|cysa_chlvu : 69.3) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 410.7649) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27838 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7fs01|b7fs01_phatc' "'(gnl|cdd|37566 : 251.0) no description available & (at1g03905 : 223.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G44110.1); Has 185812 Blast hits to 177765 proteins in 3375 species: Archae - 3786; Bacteria - 158244; Metazoa - 1934; Fungi - 1485; Plants - 1792; Viruses - 4; Other Eukaryotes - 18567 (source: NCBI BLink). & (loc_os03g20170.1 : 221.0) no description available & (chl4|517744 : 207.0) no description available & (gnl|cdd|34224 : 142.0) no description available & (p56344|cysa_chlvu : 70.1) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Chlorella vulgaris (Green alga) & (reliability: 446.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32559 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7fqg6|b7fqg6_phatc' "'(chl4|522118 : 439.0) no description available & (gnl|cdd|35285 : 344.0) no description available & (gnl|cdd|30834 : 212.0) no description available & (at3g54540 : 124.0) member of GCN subfamily; general control non-repressible 4 (GCN4); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: general control non-repressible 3 (TAIR:AT1G64550.1); Has 605377 Blast hits to 341410 proteins in 3920 species: Archae - 11643; Bacteria - 492389; Metazoa - 10210; Fungi - 6724; Plants - 5978; Viruses - 55; Other Eukaryotes - 78378 (source: NCBI BLink). & (loc_os03g32630.1 : 123.0) no description available & (q9mun1|cysa_mesvi : 46.2) Probable sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Mesostigma viride & (ipr003439 : 39.18477) ABC transporter-like & (reliability: 316.57336) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9372 PE=4 SV=1)'" P '34.16' 'transport.ABC transporters and multidrug resistance systems' 'tr|b7gb73|b7gb73_phatc' "'(gnl|cdd|31063 : 166.0) no description available & (ipr000825 : 108.894844) SUF system FeS cluster assembly, SufBD & (at1g32500 : 101.0) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.; non-intrinsic ABC protein 6 (NAP6); CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD (InterPro:IPR000825); BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1 (TAIR:AT4G04770.1); Has 9763 Blast hits to 9763 proteins in 1806 species: Archae - 246; Bacteria - 6215; Metazoa - 1; Fungi - 6; Plants - 107; Viruses - 0; Other Eukaryotes - 3188 (source: NCBI BLink). & (chl4|513145 : 94.4) no description available & (loc_os01g03650.1 : 85.5) no description available & (reliability: 202.0) & (original description: FeS assembly protein suf OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=sufD PE=4 SV=1)'" P '34.18' 'transport.unspecified anions' 'tr|b7s437|b7s437_phatc' "'(gnl|cdd|36387 : 388.0) no description available & (gnl|cdd|85148 : 314.0) no description available & (ipr011531 : 128.47476) Bicarbonate transporter, C-terminal & (loc_os01g08020.1 : 102.0) no description available & (at3g06450 : 96.3) HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|510111 : 66.6) no description available & (reliability: 192.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1677 PE=4 SV=1)'" P '34.18' 'transport.unspecified anions' 'tr|b7s436|b7s436_phatc' "'(gnl|cdd|36387 : 396.0) no description available & (gnl|cdd|85148 : 312.0) no description available & (ipr011531 : 126.793) Bicarbonate transporter, C-terminal & (at1g74810 : 110.0) BOR5; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G15460.1); Has 2579 Blast hits to 1402 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1942; Fungi - 299; Plants - 229; Viruses - 2; Other Eukaryotes - 103 (source: NCBI BLink). & (loc_os01g08020.1 : 100.0) no description available & (chl4|510111 : 67.4) no description available & (reliability: 220.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd714 PE=4 SV=1)'" P '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'tr|b7g933|b7g933_phatc' "'(gnl|cdd|38036 : 379.0) no description available & (gnl|cdd|85974 : 320.0) no description available & (at1g01910 : 294.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os09g34970.1 : 282.0) no description available & (chl4|521599 : 279.0) no description available & (reliability: 588.0) & (original description: ATPase ASNA1 homolog OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22896 PE=3 SV=1)'" P '34.18.1' 'transport.unspecified anions.arsenite-transporting ATPase' 'tr|b7fsn9|b7fsn9_phatc' "'(chl4|522352 : 270.0) no description available & (gnl|cdd|85974 : 192.0) no description available & (gnl|cdd|38036 : 180.0) no description available & (loc_os02g51100.1 : 159.0) no description available & (at3g10350 : 157.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 314.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32803 PE=4 SV=1)'" P '34.20' 'transport.porins' 'tr|b7g5n4|b7g5n4_phatc' "'(chl4|509712 : 72.8) no description available & (loc_os03g20750.1 : 62.4) no description available & (at3g20000 : 60.1) Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.; translocase of the outer mitochondrial membrane 40 (TOM40); FUNCTIONS IN: voltage-gated anion channel activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein targeting to mitochondrion, anion transport; LOCATED IN: mitochondrial outer membrane, mitochondrion, mitochondrial inner membrane, plasma membrane, mitochondrial outer membrane translocase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: Eukaryotic porin family protein (TAIR:AT1G50400.1); Has 530 Blast hits to 530 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 140; Plants - 72; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (gnl|cdd|38506 : 55.7) no description available & (ipr001925 : 47.101524) Porin, eukaryotic type & (gnl|cdd|82074 : 39.8) no description available & (reliability: 197.22766) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48010 PE=4 SV=1)'" P '34.20' 'transport.porins' 'tr|b7gde6|b7gde6_phatc' "'(gnl|cdd|85468 : 61.9) no description available & (gnl|cdd|38336 : 54.5) no description available & (loc_os09g19734.1 : 53.9) no description available & (at5g15090 : 45.4) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 3 (VDAC3); CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 1 (TAIR:AT3G01280.1). & (p42057|vdac_maize : 45.1) Outer plastidial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Zea mays (Maize) & (reliability: 90.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50236 PE=4 SV=1)'" P '34.21' 'transport.calcium' 'tr|b7fu88|b7fu88_phatc' "'(gnl|cdd|35425 : 973.0) no description available & (q2ras0|aca5_orysa : 589.0) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (loc_os11g04460.1 : 589.0) no description available & (at3g57330 : 578.0) autoinhibited Ca2+-ATPase 11 (ACA11); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: defense response to bacterium, negative regulation of programmed cell death, anion homeostasis; LOCATED IN: plant-type vacuole membrane, chloroplast, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca(2+)-ATPase, isoform 4 (TAIR:AT2G41560.1); Has 45492 Blast hits to 34566 proteins in 3220 species: Archae - 840; Bacteria - 31068; Metazoa - 4067; Fungi - 2704; Plants - 2054; Viruses - 3; Other Eukaryotes - 4756 (source: NCBI BLink). & (chl4|512958 : 558.0) no description available & (gnl|cdd|30822 : 556.0) no description available & (ipr023298 : 281.3309) ATPase, P-type, transmembrane domain & (reliability: 1148.0) & (original description: p2B, P type ATPase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ATPase1-2B PE=3 SV=1)'" P '34.21' 'transport.calcium' 'tr|b7gcd8|b7gcd8_phatc' "'(chl4|526295 : 707.0) no description available & (gnl|cdd|30822 : 683.0) no description available & (gnl|cdd|35423 : 618.0) no description available & (loc_os03g17310.1 : 343.0) no description available & (at1g10130 : 328.0) Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.; endoplasmic reticulum-type calcium-transporting ATPase 3 (ECA3); FUNCTIONS IN: manganese-transporting ATPase activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: manganese ion transport, calcium ion transport, root development, manganese ion homeostasis; LOCATED IN: endomembrane system, Golgi apparatus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: endomembrane-type CA-ATPase 4 (TAIR:AT1G07670.1); Has 52019 Blast hits to 33942 proteins in 3233 species: Archae - 1100; Bacteria - 36533; Metazoa - 4334; Fungi - 2931; Plants - 2474; Viruses - 3; Other Eukaryotes - 4644 (source: NCBI BLink). & (ipr023298 : 262.0247) ATPase, P-type, transmembrane domain & (q8run1|aca3_orysa : 244.0) Calcium-transporting ATPase 3, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 3) - Oryza sativa (Rice) & (reliability: 656.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23629 PE=3 SV=1)'" P '34.21' 'transport.calcium' 'tr|b7g539|b7g539_phatc' "'(chl4|510956 : 147.0) no description available & (gnl|cdd|35977 : 78.0) no description available & (loc_os01g16040.1 : 53.1) no description available & (at5g09470 : 47.8) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink). & (gnl|cdd|84566 : 44.1) no description available & (reliability: 90.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47843 PE=3 SV=1)'" P '34.22' 'transport.cyclic nucleotide or calcium regulated channels' 'tr|b7fvk8|b7fvk8_phatc' "'(gnl|cdd|86064 : 59.2) no description available & (ipr003819 : 48.88192) Taurine catabolism dioxygenase TauD/TfdA & (gnl|cdd|39092 : 43.5) no description available & (at1g19780 : 35.8) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 8 (CNGC8); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide gated channel 7 (TAIR:AT1G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 71.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44770 PE=4 SV=1)'" P '34.30' 'transport.H+ transporting pyrophosphatase' 'tr|b5y460|b5y460_phatc' "'(ipr004131 : 1500.0) Pyrophosphate-energised proton pump & (gnl|cdd|66687 : 706.0) no description available & (loc_os02g09150.1 : 659.0) no description available & (at1g15690 : 655.0) Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.; AVP1; FUNCTIONS IN: hydrogen-translocating pyrophosphatase activity; INVOLVED IN: response to water deprivation, response to salt stress, establishment or maintenance of transmembrane electrochemical gradient, leaf development, auxin polar transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: Inorganic H pyrophosphatase family protein (TAIR:AT1G16780.1); Has 5891 Blast hits to 5869 proteins in 792 species: Archae - 67; Bacteria - 1317; Metazoa - 5; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 4203 (source: NCBI BLink). & (p21616|avp_phaau : 654.0) Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) - Phaseolus aureus (Mung bean) (Vigna radiata) & (chl4|519634 : 643.0) no description available & (reliability: 1310.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21183 PE=3 SV=1)'" P '34.4' 'transport.nitrate' 'tr|b7ftv6|b7ftv6_phatc' "'(at5g60770 : 235.0) member of High affinity nitrate transporter family; nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os02g02190.1 : 231.0) no description available & (chl4|526004 : 196.0) no description available & (gnl|cdd|32405 : 188.0) no description available & (gnl|cdd|37744 : 82.6) no description available & (ipr011701 : 55.356354) Major facilitator superfamily & (reliability: 470.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26029 PE=4 SV=1)'" P '34.5' 'transport.ammonium' 'tr|b7g0y4|b7g0y4_phatc' "'(gnl|cdd|35901 : 353.0) no description available & (gnl|cdd|85113 : 310.0) no description available & (chl4|514322 : 269.0) no description available & (at1g64780 : 259.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (ipr001905 : 251.7368) Ammonium transporter & (loc_os04g43070.1 : 249.0) no description available & (reliability: 958.5394) & (original description: Ammonium transporter OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27877 PE=3 SV=1)'" P '34.5' 'transport.ammonium' 'tr|b7fpp1|b7fpp1_phatc' "'(gnl|cdd|36699 : 507.0) no description available & (gnl|cdd|31357 : 455.0) no description available & (at1g72660 : 362.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), TGS (InterPro:IPR004095), GTP1/OBG (InterPro:IPR006073), GTP1/OBG, conserved site (InterPro:IPR006074), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: developmentally regulated G-protein 1 (TAIR:AT1G17470.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os05g28940.1 : 361.0) no description available & (chl4|520135 : 356.0) no description available & (reliability: 724.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50671 PE=4 SV=1)'" P '34.8' 'transport.metabolite transporters at the envelope membrane' 'tr|b7g8y4|b7g8y4_phatc' "'(gnl|cdd|35968 : 337.0) no description available & (p04709|adt1_maize : 248.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (chl4|525806 : 248.0) no description available & (loc_os05g23720.1 : 246.0) no description available & (at4g28390 : 245.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|84566 : 91.5) no description available & (ipr018108 : 51.929836) Mitochondrial substrate/solute carrier & (reliability: 456.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22873 PE=3 SV=1)'" P '34.8' 'transport.metabolite transporters at the envelope membrane' 'tr|b7fpd9|b7fpd9_phatc' "'(gnl|cdd|36654 : 153.0) no description available & (loc_os01g07730.1 : 134.0) no description available & (at5g33320 : 123.0) Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.; CAB UNDEREXPRESSED 1 (CUE1); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: mitochondrion, chloroplast, plastid, plastid inner membrane, chloroplast envelope; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate (pep)/phosphate translocator 2 (TAIR:AT3G01550.1); Has 2791 Blast hits to 2789 proteins in 409 species: Archae - 9; Bacteria - 295; Metazoa - 571; Fungi - 421; Plants - 1194; Viruses - 0; Other Eukaryotes - 301 (source: NCBI BLink). & (p49133|tpt_maize : 117.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) - Zea mays (Maize) & (chl4|523123 : 115.0) no description available & (gnl|cdd|66803 : 92.2) no description available & (ipr004853 : 57.15916) Domain of unknown function DUF250 & (reliability: 246.0) & (original description: Triose phosphate/phosphate translocator OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tpt1 PE=4 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7fpn9|b7fpn9_phatc' "'(gnl|cdd|35987 : 171.0) no description available & (at4g39460 : 139.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (loc_os05g29860.2 : 134.0) no description available & (chl4|523601 : 100.0) no description available & (gnl|cdd|84566 : 78.0) no description available & (p29518|bt1_maize : 49.3) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (ipr018108 : 40.38182) Mitochondrial substrate/solute carrier & (reliability: 278.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17555 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7fub3|b7fub3_phatc' "'(gnl|cdd|35986 : 278.0) no description available & (chl4|520905 : 154.0) no description available & (at3g48850 : 143.0) phosphate transporter 3;2 (PHT3;2); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, chloroplast, membrane; EXPRESSED IN: stem, sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;1 (TAIR:AT5G14040.1); Has 16855 Blast hits to 11571 proteins in 428 species: Archae - 0; Bacteria - 0; Metazoa - 7278; Fungi - 4810; Plants - 3237; Viruses - 0; Other Eukaryotes - 1530 (source: NCBI BLink). & (loc_os02g52860.1 : 134.0) no description available & (gnl|cdd|84566 : 64.9) no description available & (p04709|adt1_maize : 35.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (reliability: 286.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19030 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7g8y4|b7g8y4_phatc' "'(gnl|cdd|35968 : 337.0) no description available & (p04709|adt1_maize : 248.0) ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1) - Zea mays (Maize) & (chl4|525806 : 248.0) no description available & (loc_os05g23720.1 : 246.0) no description available & (at4g28390 : 245.0) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).; ADP/ATP carrier 3 (AAC3); FUNCTIONS IN: binding, ATP:ADP antiporter activity; INVOLVED IN: transport, mitochondrial transport, purine nucleotide transport; LOCATED IN: mitochondrion, mitochondrial inner membrane, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 20286 Blast hits to 12392 proteins in 480 species: Archae - 0; Bacteria - 0; Metazoa - 9416; Fungi - 5054; Plants - 3787; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (gnl|cdd|84566 : 91.5) no description available & (ipr018108 : 51.929836) Mitochondrial substrate/solute carrier & (reliability: 490.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22873 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7gcu2|b7gcu2_phatc' "'(gnl|cdd|35988 : 143.0) no description available & (at3g05290 : 129.0) encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.; peroxisomal adenine nucleotide carrier 1 (PNC1); CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: peroxisomal adenine nucleotide carrier 2 (TAIR:AT5G27520.1); Has 7303 Blast hits to 6606 proteins in 315 species: Archae - 0; Bacteria - 0; Metazoa - 2896; Fungi - 2326; Plants - 1372; Viruses - 0; Other Eukaryotes - 709 (source: NCBI BLink). & (loc_os05g32630.1 : 122.0) no description available & (gnl|cdd|84566 : 56.1) no description available & (chl4|518857 : 51.2) no description available & (p29518|bt1_maize : 38.1) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 258.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23723 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7gdj7|b7gdj7_phatc' "'(gnl|cdd|35978 : 260.0) no description available & (loc_os05g11780.1 : 229.0) no description available & (at5g19760 : 227.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|516494 : 216.0) no description available & (gnl|cdd|84566 : 85.7) no description available & (p29518|bt1_maize : 55.1) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (ipr018108 : 42.916206) Mitochondrial substrate/solute carrier & (reliability: 454.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23908 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7fp04|b7fp04_phatc' '(gnl|cdd|38043 : 162.0) no description available & (loc_os01g55700.1 : 139.0) no description available & (at1g55900 : 129.0) component of a translocase in the mitochondrial inner membrane; TIM50; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1). & (chl4|512970 : 127.0) no description available & (gnl|cdd|47876 : 112.0) no description available & (ipr023214 : 103.02854) HAD-like domain & (reliability: 258.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_3171 PE=4 SV=1)' P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7fzy8|b7fzy8_phatc' "'(gnl|cdd|35972 : 212.0) no description available & (at4g03115 : 144.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink). & (loc_os11g48040.1 : 140.0) no description available & (chl4|523444 : 132.0) no description available & (gnl|cdd|84566 : 74.5) no description available & (p27080|adt_chlre : 70.1) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Chlamydomonas reinhardtii & (ipr018108 : 37.47624) Mitochondrial substrate/solute carrier & (reliability: 288.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35949 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7g1v3|b7g1v3_phatc' "'(chl4|516209 : 293.0) no description available & (gnl|cdd|35259 : 60.3) no description available & (at5g07320 : 50.1) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G61810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|84566 : 43.0) no description available & (loc_os01g32980.1 : 42.0) no description available & (reliability: 100.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46612 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7g539|b7g539_phatc' "'(chl4|510956 : 147.0) no description available & (gnl|cdd|35977 : 78.0) no description available & (loc_os01g16040.1 : 53.1) no description available & (at5g09470 : 47.8) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink). & (gnl|cdd|84566 : 44.1) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47843 PE=3 SV=1)'" P '34.9' 'transport.metabolite transporters at the mitochondrial membrane' 'tr|b7gbt9|b7gbt9_phatc' "'(gnl|cdd|35978 : 172.0) no description available & (at1g14140 : 134.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink). & (loc_os04g37630.1 : 125.0) no description available & (chl4|523444 : 115.0) no description available & (gnl|cdd|84566 : 62.6) no description available & (p29518|bt1_maize : 62.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 268.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49764 PE=3 SV=1)'" P '34.98' 'transport.membrane system unknown' 'tr|b7fsu9|b7fsu9_phatc' "'(at1g30560 : 199.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity, glycerol-3-phosphate transmembrane transporter activity; INVOLVED IN: glycerol-3-phosphate transport, transport, transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: root hair specific 15 (TAIR:AT4G25220.1); Has 20742 Blast hits to 20659 proteins in 2173 species: Archae - 379; Bacteria - 17283; Metazoa - 812; Fungi - 1059; Plants - 388; Viruses - 0; Other Eukaryotes - 821 (source: NCBI BLink). & (loc_os02g43620.1 : 178.0) no description available & (gnl|cdd|32452 : 167.0) no description available & (gnl|cdd|37744 : 155.0) no description available & (chl4|512908 : 152.0) no description available & (ipr011701 : 53.672806) Major facilitator superfamily & (reliability: 398.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43611 PE=4 SV=1)'" P '34.99' 'transport.misc' 'tr|b5y485|b5y485_phatc' "'(gnl|cdd|38525 : 188.0) no description available & (at5g58030 : 187.0) Transport protein particle (TRAPP) component; CONTAINS InterPro DOMAIN/s: Transport protein particle (TRAPP) component (InterPro:IPR007194), TRAPP I complex, Trs31 (InterPro:IPR016696); Has 560 Blast hits to 545 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 199; Plants - 63; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink). & (loc_os01g51220.1 : 186.0) no description available & (chl4|511895 : 158.0) no description available & (gnl|cdd|34729 : 151.0) no description available & (ipr007194 : 74.732544) Transport protein particle (TRAPP) component & (reliability: 374.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_21198 PE=4 SV=1)'" P '34.99' 'transport.misc' 'tr|b5y477|b5y477_phatc' "'(gnl|cdd|87463 : 97.6) no description available & (at5g58070 : 70.9) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.; temperature-induced lipocalin (TIL); FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to cold, response to light stimulus, response to heat; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Lipocalin, bacterial (InterPro:IPR002446), Lipocalin, ApoD type (InterPro:IPR022271), Lipocalin-like (InterPro:IPR013208), Lipocalin conserved site (InterPro:IPR022272), Calycin (InterPro:IPR012674), Calycin-like (InterPro:IPR011038); Has 2007 Blast hits to 1991 proteins in 692 species: Archae - 0; Bacteria - 1480; Metazoa - 169; Fungi - 10; Plants - 132; Viruses - 6; Other Eukaryotes - 210 (source: NCBI BLink). & (ipr012674 : 70.59168) Calycin & (loc_os08g34150.1 : 65.5) no description available & (gnl|cdd|40021 : 53.9) no description available & (reliability: 141.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46924 PE=3 SV=1)'" P '34.99' 'transport.misc' 'tr|b7fri5|b7fri5_phatc' "'(gnl|cdd|36684 : 100.0) no description available & (loc_os02g24430.2 : 98.2) no description available & (chl4|520005 : 90.9) no description available & (at4g34580 : 90.1) Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.; CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink). & (ipr001251 : 74.732544) CRAL-TRIO domain & (gnl|cdd|29115 : 73.5) no description available & (reliability: 180.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42504 PE=4 SV=1)'" P '34.99' 'transport.misc' 'tr|b7fsj4|b7fsj4_phatc' "'(at3g52640 : 85.5) Zn-dependent exopeptidases superfamily protein; INVOLVED IN: protein processing; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicastrin (InterPro:IPR008710); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37868 : 80.9) no description available & (gnl|cdd|68999 : 74.7) no description available & (loc_os02g50360.1 : 73.9) no description available & (chl4|523776 : 62.8) no description available & (reliability: 171.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43532 PE=4 SV=1)'" P '34.99' 'transport.misc' 'tr|b7fts0|b7fts0_phatc' "'(gnl|cdd|36684 : 64.8) no description available & (gnl|cdd|47819 : 54.6) no description available & (at2g21540 : 50.8) SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1). & (chl4|517465 : 47.0) no description available & (loc_os08g38850.2 : 43.1) no description available & (reliability: 95.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44341 PE=4 SV=1)'" P '34.99' 'transport.misc' 'tr|b7g539|b7g539_phatc' "'(chl4|510956 : 147.0) no description available & (gnl|cdd|35977 : 78.0) no description available & (loc_os01g16040.1 : 53.1) no description available & (at5g09470 : 47.8) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink). & (gnl|cdd|84566 : 44.1) no description available & (reliability: 90.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47843 PE=3 SV=1)'" P '34.99' 'transport.misc' 'tr|b7gd39|b7gd39_phatc' "'(ipr023201 : 1500.0) SecY subunit domain & (gnl|cdd|36587 : 727.0) no description available & (loc_os09g17840.1 : 699.0) no description available & (at1g29310 : 697.0) SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|520885 : 675.0) no description available & (gnl|cdd|82683 : 372.0) no description available & (reliability: 1394.0) & (original description: Transport protein Sec61 alpha subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Sec61alpha PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g4r3|b7g4r3_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|29572 : 553.0) no description available & (gnl|cdd|39356 : 442.0) no description available & (loc_os06g14740.1 : 78.6) no description available & (at1g18270 : 68.6) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (reliability: 137.2) & (original description: Cytosolic class II aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Fba3 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g9b3|b7g9b3_phatc' "'(gnl|cdd|38584 : 166.0) no description available & (at2g04690 : 145.0) Pyridoxamine 5'-phosphate oxidase family protein; FUNCTIONS IN: FMN binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular repressor of E1A-stimulated genes (CREG) (InterPro:IPR014631), FMN-binding split barrel (InterPro:IPR012349), FMN-binding split barrel, related (InterPro:IPR009002); Has 408 Blast hits to 408 proteins in 115 species: Archae - 0; Bacteria - 83; Metazoa - 160; Fungi - 2; Plants - 80; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (loc_os06g13100.1 : 128.0) no description available & (chl4|510039 : 101.0) no description available & (ipr012349 : 49.433098) FMN-binding split barrel & (gnl|cdd|85331 : 38.7) no description available & (reliability: 290.0) & (original description: Cellular repressor of e1a-stimulated gene-like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CREG1 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7s3n8|b7s3n8_phatc' "'(gnl|cdd|29572 : 559.0) no description available & (gnl|cdd|39356 : 379.0) no description available & (ipr013785 : 284.68765) Aldolase-type TIM barrel & (at1g18270 : 69.7) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (loc_os06g14740.1 : 67.0) no description available & (reliability: 139.4) & (original description: Fructose-bisphosphate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FbaC1 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g9g9|b7g9g9_phatc' "'(gnl|cdd|29572 : 594.0) no description available & (gnl|cdd|39356 : 391.0) no description available & (ipr013785 : 292.16595) Aldolase-type TIM barrel & (loc_os06g14740.1 : 89.7) no description available & (at1g18270 : 74.3) ketose-bisphosphate aldolase class-II family protein; FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), Ketose-bisphosphate aldolase, class-II (InterPro:IPR000771), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), Protein of unknown function, DUF1537 (InterPro:IPR010737), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT4G20930.1). & (reliability: 148.6) & (original description: Fructose-1,6-bisphosphate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FbaC2 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g6t5|b7g6t5_phatc' "'(gnl|cdd|80626 : 507.0) no description available & (gnl|cdd|36482 : 352.0) no description available & (at3g24090 : 267.0) glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). & (chl4|525548 : 265.0) no description available & (loc_os11g03900.1 : 241.0) no description available & (p52418|pur1_soybn : 44.7) Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT) - Glycine max (Soybean) & (reliability: 534.0) & (original description: Glutamine-fructose-6-phosphate transaminase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GFA1 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b5y563|b5y563_phatc' '(gnl|cdd|86777 : 148.0) no description available & (gnl|cdd|38045 : 132.0) no description available & (q9as33|npl4_orysa : 126.0) NPL4-like protein - Oryza sativa (Rice) & (loc_os01g27990.1 : 126.0) no description available & (at2g47970 : 121.0) Nuclear pore localisation protein NPL4; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPL4 (InterPro:IPR007717); BEST Arabidopsis thaliana protein match is: NPL4-like protein 1 (TAIR:AT3G63000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr007717 : 90.7684) Nuclear pore localisation protein NPL4 & (reliability: 242.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=hNpl4 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b5y5u5|b5y5u5_phatc' "'(gnl|cdd|31017 : 114.0) no description available & (ipr016040 : 63.83053) NAD(P)-binding domain & (loc_os08g05280.1 : 48.1) no description available & (gnl|cdd|37952 : 46.4) no description available & (at4g17370 : 43.1) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 13319 Blast hits to 13319 proteins in 1855 species: Archae - 262; Bacteria - 9244; Metazoa - 179; Fungi - 353; Plants - 43; Viruses - 0; Other Eukaryotes - 3238 (source: NCBI BLink). & (reliability: 86.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_33631 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b5y3b2|b5y3b2_phatc' "'(gnl|cdd|31017 : 215.0) no description available & (gnl|cdd|37952 : 115.0) no description available & (ipr016040 : 104.75576) NAD(P)-binding domain & (at4g17370 : 73.6) Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 13319 Blast hits to 13319 proteins in 1855 species: Archae - 262; Bacteria - 9244; Metazoa - 179; Fungi - 353; Plants - 43; Viruses - 0; Other Eukaryotes - 3238 (source: NCBI BLink). & (loc_os08g05280.1 : 63.2) no description available & (chl4|510666 : 61.6) no description available & (p31405|vata_goshi : 35.4) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14) (V-ATPase subunit A) (Vacuolar proton pump subunit alpha) (V-ATPase 69 kDa subunit) - Gossypium hirsutum (Upland cotton) & (reliability: 147.2) & (original description: Myo-inositol 2-dehydrogenase putative (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_3639 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b5y4h3|b5y4h3_phatc' '(gnl|cdd|28953 : 66.1) no description available & (gnl|cdd|37073 : 48.6) no description available & (chl4|522177 : 46.6) no description available & (loc_os01g69990.1 : 44.7) no description available & (at5g42950 : 42.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 84.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43835 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b5y4q1|b5y4q1_phatc' "'(gnl|cdd|37314 : 214.0) no description available & (gnl|cdd|87370 : 195.0) no description available & (at5g11560 : 139.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (loc_os05g14170.1 : 137.0) no description available & (chl4|511493 : 122.0) no description available & (ipr011678 : 103.434006) Domain of unknown function DUF1620 & (reliability: 278.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43900 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b5y4y7|b5y4y7_phatc' "'(chl4|513429 : 97.1) no description available & (gnl|cdd|85824 : 82.6) no description available & (gnl|cdd|38276 : 67.8) no description available & (ipr016069 : 61.639168) Translin, C-terminal & (loc_os01g16100.1 : 47.8) no description available & (at2g37020 : 44.3) Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068). & (reliability: 88.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43976 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b5y3c7|b5y3c7_phatc' "'(gnl|cdd|36675 : 116.0) no description available & (loc_os06g23160.1 : 72.4) no description available & (at5g19485 : 70.5) transferases;nucleotidyltransferases; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT2G34970.1); Has 6119 Blast hits to 5902 proteins in 1501 species: Archae - 491; Bacteria - 3115; Metazoa - 435; Fungi - 482; Plants - 325; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (gnl|cdd|31401 : 64.6) no description available & (chl4|518271 : 56.2) no description available & (p12298|glgl1_wheat : 35.8) Glucose-1-phosphate adenylyltransferase large subunit (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) - Triticum aestivum (Wheat) & (reliability: 141.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46656 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fud8|b7fud8_phatc' "'(at2g34460 : 176.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (loc_os06g25439.1 : 154.0) no description available & (chl4|520068 : 113.0) no description available & (gnl|cdd|36417 : 102.0) no description available & (ipr016040 : 93.93598) NAD(P)-binding domain & (gnl|cdd|30800 : 54.6) no description available & (reliability: 352.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_10747 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fwc4|b7fwc4_phatc' "'(gnl|cdd|48219 : 294.0) no description available & (loc_os10g32700.1 : 289.0) no description available & (at5g62740 : 279.0) HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink). & (gnl|cdd|37831 : 244.0) no description available & (chl4|512123 : 241.0) no description available & (ipr001107 : 62.749615) Band 7 protein & (reliability: 558.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11673 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fnz1|b7fnz1_phatc' '(gnl|cdd|48215 : 211.0) no description available & (gnl|cdd|37831 : 207.0) no description available & (at5g54100 : 201.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT4G27585.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os08g06200.1 : 190.0) no description available & (chl4|521798 : 186.0) no description available & (ipr001107 : 58.506237) Band 7 protein & (reliability: 402.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17332 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b7fxb1|b7fxb1_phatc' "'(gnl|cdd|48219 : 283.0) no description available & (at3g01290 : 274.0) SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 7523 Blast hits to 7522 proteins in 1968 species: Archae - 210; Bacteria - 4831; Metazoa - 573; Fungi - 279; Plants - 280; Viruses - 3; Other Eukaryotes - 1347 (source: NCBI BLink). & (loc_os10g32700.1 : 267.0) no description available & (gnl|cdd|37831 : 238.0) no description available & (chl4|512123 : 223.0) no description available & (ipr001107 : 58.9117) Band 7 protein & (reliability: 548.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19805 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g0b2|b7g0b2_phatc' "'(ipr000581 : 1500.0) Dihydroxy-acid/6-phosphogluconate dehydratase & (gnl|cdd|37659 : 799.0) no description available & (gnl|cdd|80774 : 765.0) no description available & (chl4|521637 : 692.0) no description available & (loc_os08g44530.1 : 679.0) no description available & (at3g23940 : 674.0) dehydratase family; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581). & (reliability: 1348.0) & (original description: Homeobox protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_20547 PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g8p1|b7g8p1_phatc' "'(at4g03410 : 122.0) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT1G52870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|37155 : 120.0) no description available & (loc_os03g38730.1 : 110.0) no description available & (chl4|523845 : 106.0) no description available & (gnl|cdd|67722 : 53.8) no description available & (ipr007248 : 40.31513) Mpv17/PMP22 & (reliability: 244.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_22819 PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fur8|b7fur8_phatc' "'(gnl|cdd|36491 : 566.0) no description available & (loc_os11g07910.2 : 480.0) no description available & (at1g10950 : 474.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.; transmembrane nine 1 (TMN1); LOCATED IN: integral to membrane, Golgi apparatus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT5G37310.1); Has 1611 Blast hits to 1538 proteins in 326 species: Archae - 0; Bacteria - 16; Metazoa - 610; Fungi - 273; Plants - 454; Viruses - 0; Other Eukaryotes - 258 (source: NCBI BLink). & (chl4|515203 : 474.0) no description available & (gnl|cdd|66650 : 403.0) no description available & (ipr004240 : 297.7885) Nonaspanin (TM9SF) & (reliability: 948.0) & (original description: Transmembrane 9 superfamily member OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26299 PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fve3|b7fve3_phatc' "'(chl4|523902 : 141.0) no description available & (ipr016040 : 111.32259) NAD(P)-binding domain & (gnl|cdd|36417 : 88.2) no description available & (at2g34460 : 80.5) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (loc_os06g25439.1 : 79.3) no description available & (gnl|cdd|30800 : 70.4) no description available & (p52579|ifrh_tobac : 40.8) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 161.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26382 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g119|b7g119_phatc' "'(chl4|519472 : 195.0) no description available & (gnl|cdd|31927 : 137.0) no description available & (ipr014710 : 132.269) RmlC-like jelly roll fold & (at2g43120 : 71.6) RmlC-like cupins superfamily protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: stem, flower; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: pirin (TAIR:AT3G59220.1); Has 7357 Blast hits to 7357 proteins in 1454 species: Archae - 66; Bacteria - 4603; Metazoa - 71; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2273 (source: NCBI BLink). & (loc_os03g62790.2 : 68.6) no description available & (reliability: 143.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_27889 PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7frb9|b7frb9_phatc' "'(gnl|cdd|37155 : 119.0) no description available & (chl4|523845 : 95.9) no description available & (at5g19750 : 80.5) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisomal membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT2G14860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os11g03670.1 : 72.4) no description available & (gnl|cdd|67722 : 54.5) no description available & (ipr007248 : 36.969196) Mpv17/PMP22 & (reliability: 161.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31436 PE=3 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7frm1|b7frm1_phatc' '(gnl|cdd|31009 : 169.0) no description available & (ipr006076 : 124.07723) FAD dependent oxidoreductase & (gnl|cdd|38055 : 78.1) no description available & (at5g48440 : 58.9) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (loc_os09g33900.2 : 55.1) no description available & (chl4|516471 : 48.9) no description available & (reliability: 117.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31544 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b7ft02|b7ft02_phatc' "'(gnl|cdd|30892 : 104.0) no description available & (ipr023214 : 64.377075) HAD-like domain & (gnl|cdd|38125 : 53.8) no description available & (chl4|517316 : 47.0) no description available & (loc_os06g01990.1 : 42.4) no description available & (at1g14310 : 39.3) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Haloacid dehydrogenase/epoxide hydrolase (InterPro:IPR005833), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G41250.1); Has 5555 Blast hits to 5555 proteins in 1508 species: Archae - 313; Bacteria - 4016; Metazoa - 183; Fungi - 73; Plants - 110; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). & (reliability: 78.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32916 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g362|b7g362_phatc' '(gnl|cdd|72898 : 90.0) no description available & (gnl|cdd|39748 : 74.3) no description available & (at1g14620 : 68.9) DECOY (DECOY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 231 Blast hits to 231 proteins in 117 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 103; Plants - 44; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (loc_os06g19640.1 : 60.8) no description available & (chl4|521360 : 57.8) no description available & (reliability: 137.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37579 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b7gce5|b7gce5_phatc' "'(at1g55930 : 164.0) CBS domain-containing protein / transporter associated domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Transporter-associated domain (InterPro:IPR005170), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein / transporter associated domain-containing protein (TAIR:AT3G13070.1); Has 15725 Blast hits to 15720 proteins in 2584 species: Archae - 144; Bacteria - 11495; Metazoa - 247; Fungi - 139; Plants - 193; Viruses - 0; Other Eukaryotes - 3507 (source: NCBI BLink). & (gnl|cdd|31445 : 153.0) no description available & (loc_os03g39640.1 : 136.0) no description available & (gnl|cdd|37329 : 87.4) no description available & (ipr002550 : 59.336586) Domain of unknown function DUF21 & (chl4|514391 : 40.8) no description available & (reliability: 328.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40783 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fp35|b7fp35_phatc' "'(ipr016040 : 104.9634) NAD(P)-binding domain & (chl4|523902 : 78.2) no description available & (at2g34460 : 77.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G18890.1); Has 4817 Blast hits to 4761 proteins in 1319 species: Archae - 56; Bacteria - 3261; Metazoa - 151; Fungi - 101; Plants - 561; Viruses - 0; Other Eukaryotes - 687 (source: NCBI BLink). & (gnl|cdd|36417 : 72.4) no description available & (loc_os06g25439.1 : 68.6) no description available & (gnl|cdd|30800 : 61.9) no description available & (p14720|dfra_pethy : 49.7) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Petunia hybrida (Petunia) & (reliability: 154.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42659 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fpj6|b7fpj6_phatc' "'(loc_os05g33280.1 : 43.5) no description available & (at1g54780 : 42.7) Encodes a thylakoid lumen protein regulating photosystem II repair cycle.; TLP18.3; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosystem II repair; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF477 (InterPro:IPR007621); Has 209 Blast hits to 209 proteins in 92 species: Archae - 0; Bacteria - 130; Metazoa - 2; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 85.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42790 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fpq9|b7fpq9_phatc' "'(loc_os09g07460.1 : 140.0) no description available & (at3g07720 : 135.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: nitrile specifier protein 5 (TAIR:AT5G48180.1); Has 10920 Blast hits to 5857 proteins in 349 species: Archae - 8; Bacteria - 366; Metazoa - 5368; Fungi - 1057; Plants - 2178; Viruses - 16; Other Eukaryotes - 1927 (source: NCBI BLink). & (chl4|511894 : 133.0) no description available & (gnl|cdd|35600 : 101.0) no description available & (ipr015916 : 63.442764) Galactose oxidase, beta-propeller & (q39610|dyha_chlre : 51.6) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (gnl|cdd|32869 : 37.6) no description available & (reliability: 270.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42836 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fqw3|b7fqw3_phatc' "'(gnl|cdd|86562 : 132.0) no description available & (at1g07705 : 118.0) NOT2 / NOT3 / NOT5 family; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282); BEST Arabidopsis thaliana protein match is: VIRE2 interacting protein 2 (TAIR:AT5G59710.1); Has 3259 Blast hits to 2610 proteins in 429 species: Archae - 0; Bacteria - 983; Metazoa - 821; Fungi - 441; Plants - 185; Viruses - 8; Other Eukaryotes - 821 (source: NCBI BLink). & (loc_os02g54120.4 : 117.0) no description available & (chl4|524077 : 117.0) no description available & (gnl|cdd|37362 : 88.9) no description available & (ipr007282 : 58.042664) NOT2/NOT3/NOT5 & (reliability: 236.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43176 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7fxy3|b7fxy3_phatc' "'(loc_os02g35039.1 : 64.7) no description available & (gnl|cdd|39489 : 64.6) no description available & (at5g15910 : 59.7) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|521479 : 58.2) no description available & (gnl|cdd|30800 : 58.1) no description available & (ipr016040 : 43.34365) NAD(P)-binding domain & (p52580|ifrh_maize : 36.2) Isoflavone reductase homolog IRL (EC 1.3.1.-) - Zea mays (Maize) & (reliability: 119.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45515 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g255|b7g255_phatc' "'(gnl|cdd|35528 : 340.0) no description available & (at3g63460 : 248.0) transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G18830.1). & (chl4|513315 : 172.0) no description available & (loc_os07g46370.1 : 160.0) no description available & (ipr015943 : 91.227936) WD40/YVTN repeat-like-containing domain & (gnl|cdd|29257 : 76.2) no description available & (p49178|gbb_maize : 35.8) Guanine nucleotide-binding protein subunit beta - Zea mays (Maize) & (reliability: 496.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47010 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g2f8|b7g2f8_phatc' "'(gnl|cdd|86455 : 105.0) no description available & (gnl|cdd|38138 : 91.2) no description available & (ipr004728 : 54.23242) Translocation protein Sec62 & (chl4|518631 : 52.8) no description available & (at3g20920 : 47.0) translocation protein-related; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocation protein Sec62 (InterPro:IPR004728); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g23890.1 : 45.4) no description available & (reliability: 94.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47099 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g2r8|b7g2r8_phatc' "'(gnl|cdd|73122 : 115.0) no description available & (loc_os01g44360.1 : 91.7) no description available & (at1g47271 : 81.6) Cystathionine beta-synthase (CBS) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) family protein (TAIR:AT5G10860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|36975 : 60.8) no description available & (ipr013785 : 59.908035) Aldolase-type TIM barrel & (chl4|512227 : 41.2) no description available & (reliability: 163.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47178 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g2x8|b7g2x8_phatc' "'(gnl|cdd|37581 : 189.0) no description available & (at1g03910 : 186.0) EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein, cactus-binding domain, C-terminal (InterPro:IPR019134), Cactin, central region (InterPro:IPR018816); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36815.2). & (loc_os03g58590.1 : 182.0) no description available & (chl4|526057 : 171.0) no description available & (ipr019134 : 118.858955) Cactin C-terminal domain & (reliability: 372.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47233 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g5c7|b7g5c7_phatc' '(gnl|cdd|37747 : 65.4) no description available & (ipr003428 : 62.074486) Mitochondrial glycoprotein & (gnl|cdd|85957 : 62.0) no description available & (chl4|510180 : 52.8) no description available & (at1g80720 : 43.9) Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT1G15870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os08g34130.1 : 39.3) no description available & (reliability: 87.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47918 PE=4 SV=1)' P '35.1' 'not assigned.no ontology' 'tr|b7g829|b7g829_phatc' "'(gnl|cdd|35383 : 103.0) no description available & (gnl|cdd|30768 : 97.0) no description available & (at4g36520 : 56.2) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 187564 Blast hits to 104912 proteins in 3501 species: Archae - 1251; Bacteria - 31029; Metazoa - 79517; Fungi - 15919; Plants - 9547; Viruses - 688; Other Eukaryotes - 49613 (source: NCBI BLink). & (chl4|520897 : 49.7) no description available & (loc_os07g28940.1 : 42.7) no description available & (q40554|if3a_tobac : 41.6) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (PNLA-35) - Nicotiana tabacum (Common tobacco) & (reliability: 112.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48676 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g9s0|b7g9s0_phatc' "'(gnl|cdd|38522 : 73.9) no description available & (gnl|cdd|86954 : 72.4) no description available & (at5g06660 : 53.1) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF106, transmembrane (InterPro:IPR002809), Uncharacterised conserved protein UCP023322, transmembrane eukaryotic (InterPro:IPR008559); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF106, transmembrane (TAIR:AT3G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os03g51160.2 : 45.8) no description available & (chl4|521127 : 38.1) no description available & (reliability: 103.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49185 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7gb04|b7gb04_phatc' "'(gnl|cdd|35383 : 64.5) no description available & (gnl|cdd|31389 : 59.7) no description available & (at2g25320 : 50.1) TRAF-like family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1); Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900; Bacteria - 9328; Metazoa - 35691; Fungi - 5783; Plants - 4303; Viruses - 204; Other Eukaryotes - 17443 (source: NCBI BLink). & (chl4|524057 : 47.4) no description available & (loc_os02g20410.1 : 38.1) no description available & (reliability: 100.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49550 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7gbg6|b7gbg6_phatc' "'(ipr011990 : 136.79413) Tetratricopeptide-like helical & (gnl|cdd|37051 : 135.0) no description available & (chl4|513598 : 105.0) no description available & (at1g01320 : 77.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (loc_os07g23990.2 : 77.0) no description available & (gnl|cdd|30805 : 54.6) no description available & (o82039|spy_pethy : 47.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (reliability: 143.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49686 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|b7g935|b7g935_phatc' "'(gnl|cdd|31389 : 53.5) no description available & (gnl|cdd|35383 : 49.9) no description available & (loc_os08g30060.3 : 45.1) no description available & (at4g27500 : 40.8) interacts with H+-ATPase, and regulates its activity; proton pump interactor 1 (PPI1); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of proton transport; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 56187 Blast hits to 35171 proteins in 2461 species: Archae - 533; Bacteria - 11472; Metazoa - 20772; Fungi - 6196; Plants - 2564; Viruses - 257; Other Eukaryotes - 14393 (source: NCBI BLink). & (chl4|516205 : 37.7) no description available & (reliability: 79.4) & (original description: Lipoprotein, type 6 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54971 PE=4 SV=1)'" P '35.1' 'not assigned.no ontology' 'tr|a0t0m4|a0t0m4_phatc' "'(loc_os08g44000.1 : 272.0) no description available & (at4g35250 : 261.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|515938 : 261.0) no description available & (gnl|cdd|36417 : 119.0) no description available & (ipr016040 : 104.196144) NAD(P)-binding domain & (gnl|cdd|31046 : 99.6) no description available & (p52580|ifrh_maize : 40.0) Isoflavone reductase homolog IRL (EC 1.3.1.-) - Zea mays (Maize) & (reliability: 522.0) & (original description: Uncharacterized protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ycf39 PE=4 SV=1)'" P '35.1.12' 'not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein' 'tr|b7g3s0|b7g3s0_phatc' "'(gnl|cdd|37399 : 108.0) no description available & (ipr011989 : 50.126244) Armadillo-like helical & (at1g72320 : 41.2) Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.; pumilio 23 (PUM23); FUNCTIONS IN: RNA binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|34702 : 37.7) no description available & (reliability: 82.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47259 PE=4 SV=1)'" P '35.1.20' 'not assigned.no ontology.formin homology 2 domain-containing protein' 'tr|b7fwd0|b7fwd0_phatc' "'(chl4|516118 : 41.2) no description available & (at4g15200 : 38.9) Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.; formin 3 (FH3); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology5 (TAIR:AT5G54650.2). & (gnl|cdd|32961 : 37.3) no description available & (gnl|cdd|36189 : 37.0) no description available & (loc_os07g30480.1 : 35.4) no description available & (reliability: 77.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45068 PE=4 SV=1)'" P '35.1.21' 'not assigned.no ontology.epsin N-terminal homology (ENTH) domain-containing protein' 'tr|b7g2t5|b7g2t5_phatc' "'(gnl|cdd|48660 : 62.6) no description available & (gnl|cdd|35472 : 45.4) no description available & (at1g14910 : 42.7) ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat, mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1433 Blast hits to 1265 proteins in 231 species: Archae - 2; Bacteria - 84; Metazoa - 471; Fungi - 269; Plants - 492; Viruses - 2; Other Eukaryotes - 113 (source: NCBI BLink). & (loc_os03g16800.2 : 42.4) no description available & (chl4|519599 : 38.5) no description available & (reliability: 85.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47192 PE=4 SV=1)'" P '35.1.26' 'not assigned.no ontology.DC1 domain containing protein' 'tr|b7fz61|b7fz61_phatc' "'(gnl|cdd|48513 : 114.0) no description available & (chl4|518854 : 103.0) no description available & (gnl|cdd|37712 : 103.0) no description available & (loc_os03g29190.1 : 101.0) no description available & (at1g60420 : 87.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (ipr012335 : 67.16063) no description available & (reliability: 174.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45921 PE=4 SV=1)'" P '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'tr|b7ft97|b7ft97_phatc' "'(at3g52140 : 287.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (gnl|cdd|37050 : 268.0) no description available & (loc_os02g48620.2 : 267.0) no description available & (q8s8w4|cyf_atrbe : 36.2) Apocytochrome f precursor - Atropa belladonna (Belladonna) (Deadly nightshade) & (reliability: 574.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43732 PE=3 SV=1)'" P '35.1.27' 'not assigned.no ontology.tetratricopeptide repeat (TPR)' 'tr|b7gbg6|b7gbg6_phatc' "'(ipr011990 : 136.79413) Tetratricopeptide-like helical & (gnl|cdd|37051 : 135.0) no description available & (chl4|513598 : 105.0) no description available & (at1g01320 : 77.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1). & (loc_os07g23990.2 : 77.0) no description available & (gnl|cdd|30805 : 54.6) no description available & (o82039|spy_pethy : 47.0) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (PhSPY) - Petunia hybrida (Petunia) & (reliability: 154.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49686 PE=4 SV=1)'" P '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'tr|b7fw14|b7fw14_phatc' "'(gnl|cdd|87137 : 86.5) no description available & (at3g14010 : 65.9) hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2.; CTC-interacting domain 4 (CID4); FUNCTIONS IN: protein binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LsmAD domain (InterPro:IPR009604), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 3 (TAIR:AT1G54170.1). & (chl4|520121 : 62.8) no description available & (loc_os02g27950.1 : 60.5) no description available & (gnl|cdd|37195 : 55.4) no description available & (ipr009604 : 39.671577) LsmAD domain & (reliability: 131.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44892 PE=4 SV=1)'" P '35.1.41' 'not assigned.no ontology.hydroxyproline rich proteins' 'tr|b7g3k0|b7g3k0_phatc' '(gnl|cdd|86706 : 124.0) no description available & (gnl|cdd|36135 : 110.0) no description available & (ipr006745 : 90.17188) no description available & (chl4|511837 : 89.0) no description available & (loc_os06g20390.1 : 83.2) no description available & (at4g26750 : 79.3) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 158.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47496 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fxs8|b7fxs8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45465 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwx5|b7fwx5_phatc' ' (original description: Precursor of fumarase fumarase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FUM1 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gc30|b7gc30_phatc' ' (original description: Phospholipid scramblase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PLS1 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'sp|a0t0e8|atpx_phatc' "' (original description: ATP synthase subunit b', chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpG PE=3 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g5x2|b7g5x2_phatc' ' (original description: Carnitine o-acetyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CAT2 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1t5|b7g1t5_phatc' ' (original description: Clathrin light chain OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=CLC PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5u3|b7g5u3_phatc' ' (original description: Frustulin 2 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=fru2 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyl2|b7fyl2_phatc' ' no hits & (original description: Iron starvation induced protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ISIP2A PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9b1|b7g9b1_phatc' ' no hits & (original description: Iron starvation induced protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=ISIP2B PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fny6|b7fny6_phatc' ' (original description: Early light induced protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=LHL1 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1a2|b7g1a2_phatc' ' (original description: Mucin-associated surface protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=MASP1 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fsp2|b7fsp2_phatc' "' (original description: ADP,ATP carrier protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=NTT5 PE=3 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fz94|b7fz94_phatc' ' (original description: Oxygen-evolving enhancer protein 3 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=OEE3 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5j0|b5y5j0_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_10261 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gc36|b7gc36_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23552 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y4s2|b5y4s2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_33251 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3g6|b5y3g6_phatc' "'(gnl|cdd|38587 : 60.7) no description available & (gnl|cdd|86955 : 60.5) no description available & (loc_os11g14990.1 : 40.8) no description available & (chl4|513938 : 37.0) no description available & (at2g31725 : 36.2) Eukaryotic protein of unknown function (DUF842); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF842) (TAIR:AT1G05730.1); Has 259 Blast hits to 259 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 173; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 72.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_36711 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b5y4c7|b5y4c7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43801 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y4i1|b5y4i1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43841 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y4u4|b5y4u4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43939 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y4v2|b5y4v2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43945 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y576|b5y576_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44054 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y582|b5y582_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44060 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5b4|b5y5b4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44091 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5e9|b5y5e9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44122 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5k7|b5y5k7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44172 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5m8|b5y5m8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44192 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5q7|b5y5q7_phatc' "'(chl4|521162 : 169.0) no description available & (at1g73060 : 157.0) Low PSII Accumulation 3 (LPA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1995) (TAIR:AT5G48790.1); Has 97 Blast hits to 97 proteins in 32 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (loc_os02g02520.1 : 157.0) no description available & (gnl|cdd|87898 : 74.1) no description available & (ipr018962 : 51.573162) Domain of unknown function DUF1995 & (reliability: 314.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44212 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b5y5v7|b5y5v7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_44249 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3j3|b5y3j3_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46709 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3j4|b5y3j4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46710 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3k6|b5y3k6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46721 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3p4|b5y3p4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46758 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3q3|b5y3q3_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46766 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3t0|b5y3t0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46792 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3x3|b5y3x3_phatc' '(at3g20980 : 36.6) Gag-Pol-related retrotransposon family protein; BEST Arabidopsis thaliana protein match is: Gag-Pol-related retrotransposon family protein (TAIR:AT3G21000.1); Has 688 Blast hits to 571 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 27; Plants - 650; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 73.2) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46834 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y3y1|b5y3y1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46841 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y470|b5y470_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46917 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y488|b5y488_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46929 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y495|b5y495_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_46937 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b5y5i1|b5y5i1_phatc' "'(gnl|cdd|38270 : 130.0) no description available & (at3g04830 : 96.7) Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 523 Blast hits to 519 proteins in 216 species: Archae - 31; Bacteria - 43; Metazoa - 200; Fungi - 109; Plants - 58; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (chl4|514537 : 89.7) no description available & (loc_os02g03470.1 : 83.6) no description available & (reliability: 193.4) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_5873 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fv88|b7fv88_phatc' "'(gnl|cdd|37238 : 139.0) no description available & (loc_os01g51010.1 : 113.0) no description available & (at1g34220 : 111.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G35730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr005061 : 110.42877) Domain of unknown function DUF292, eukaryotic & (gnl|cdd|67036 : 109.0) no description available & (chl4|509933 : 95.9) no description available & (reliability: 222.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11271 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fwa7|b7fwa7_phatc' "'(gnl|cdd|69978 : 219.0) no description available & (chl4|517131 : 164.0) no description available & (at3g08010 : 160.0) Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II.; ATAB2; FUNCTIONS IN: RNA binding; INVOLVED IN: de-etiolation, chloroplast organization, translation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1092 (InterPro:IPR009472); Has 382 Blast hits to 382 proteins in 92 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). & (ipr009472 : 154.83533) Protein of unknown function DUF1092 & (loc_os02g39740.1 : 140.0) no description available & (reliability: 320.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_11792 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g1s8|b7g1s8_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12989 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g4g2|b7g4g2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14301 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5u0|b7g5u0_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14760 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbf6|b7gbf6_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16074 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gc23|b7gc23_phatc' "'(at3g61870 : 182.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g03010.1 : 154.0) no description available & (chl4|513252 : 147.0) no description available & (reliability: 364.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16334 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7gcp0|b7gcp0_phatc' '(chl4|525629 : 107.0) no description available & (loc_os04g54640.1 : 103.0) no description available & (at2g21960 : 91.3) unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 182.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16471 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gcv4|b7gcv4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16499 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fv13|b7fv13_phatc' "'(loc_os05g13950.1 : 202.0) no description available & (at5g25757 : 189.0) RNA polymerase I-associated factor PAF67; CONTAINS InterPro DOMAIN/s: RNA polymerase I-associated factor PAF67 (InterPro:IPR019382); BEST Arabidopsis thaliana protein match is: RNA polymerase I-associated factor PAF67 (TAIR:AT5G25754.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|38881 : 173.0) no description available & (chl4|517036 : 171.0) no description available & (ipr019382 : 153.07928) Translation initiation factor 3 complex, subunit L & (reliability: 378.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_1874 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7gbb5|b7gbb5_phatc' "'(chl4|518622 : 459.0) no description available & (gnl|cdd|57983 : 434.0) no description available & (gnl|cdd|36704 : 370.0) no description available & (loc_os08g09940.1 : 360.0) no description available & (at1g30580 : 345.0) GTP binding; FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF933 (InterPro:IPR013029), TGS-like (InterPro:IPR012676), GTP1/OBG (InterPro:IPR006073), Conserved hypothetical protein CHP00092 (InterPro:IPR004396), GTP-binding protein, HSR1-related (InterPro:IPR002917), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: GTP-binding protein-related (TAIR:AT1G56050.1); Has 19150 Blast hits to 19146 proteins in 3028 species: Archae - 362; Bacteria - 11244; Metazoa - 716; Fungi - 612; Plants - 292; Viruses - 0; Other Eukaryotes - 5924 (source: NCBI BLink). & (ipr012675 : 95.57717) Beta-grasp domain & (reliability: 690.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23371 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7gcm3|b7gcm3_phatc' ' (original description: Flavodoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23658 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gem7|b7gem7_phatc' ' (original description: Carbamate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24238 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fv45|b7fv45_phatc' '(chl4|516290 : 196.0) no description available & (gnl|cdd|68809 : 125.0) no description available & (at3g61320 : 119.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (loc_os03g01570.2 : 103.0) no description available & (ipr021134 : 87.31591) Bestrophin/UPF0187 & (reliability: 238.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26635 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g3w2|b7g3w2_phatc' "'(gnl|cdd|38510 : 112.0) no description available & (gnl|cdd|87044 : 93.2) no description available & (at2g33220 : 87.8) GRIM-19 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: GRIM-19 protein (TAIR:AT1G04630.1); Has 333 Blast hits to 333 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 83; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (chl4|516336 : 84.3) no description available & (loc_os03g09210.1 : 81.6) no description available & (ipr009346 : 69.67539) GRIM-19 & (reliability: 175.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_28620 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g6i9|b7g6i9_phatc' '(gnl|cdd|80459 : 312.0) no description available & (loc_os06g21600.1 : 207.0) no description available & (at5g13030 : 191.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). & (gnl|cdd|37753 : 182.0) no description available & (chl4|515994 : 179.0) no description available & (ipr003846 : 137.16185) Uncharacterised protein family UPF0061 & (reliability: 382.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29423 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpe7|b7fpe7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31811 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpg3|b7fpg3_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_31827 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fq47|b7fq47_phatc' '(gnl|cdd|70916 : 73.5) no description available & (loc_os03g48920.1 : 54.3) no description available & (at1g54520 : 45.1) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (chl4|510691 : 38.5) no description available & (reliability: 90.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32071 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fql4|b7fql4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32237 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqp9|b7fqp9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32272 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqv2|b7fqv2_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_32327 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftt6|b7ftt6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_33768 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fu92|b7fu92_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_33928 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fuh4|b7fuh4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34014 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fus9|b7fus9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34120 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fv08|b7fv08_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34505 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fv97|b7fv97_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34590 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwd7|b7fwd7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34681 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwy9|b7fwy9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34884 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fxq4|b7fxq4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35154 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyc4|b7fyc4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35378 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyt4|b7fyt4_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35627 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fzz7|b7fzz7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35958 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fzz9|b7fzz9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35960 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0l3|b7g0l3_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36175 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0p8|b7g0p8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36211 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1t6|b7g1t6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_36600 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2b8|b7g2b8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37171 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g3w5|b7g3w5_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37468 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g465|b7g465_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_37835 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7g7|b7g7g7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39243 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g530|b7g530_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38149 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g553|b7g553_phatc' '(loc_os12g03960.1 : 36.2) no description available & (at4g29950 : 35.0) Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|31536 : 35.0) no description available & (reliability: 70.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38174 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g554|b7g554_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38175 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5h8|b7g5h8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38299 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5v4|b7g5v4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_38433 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8m5|b7g8m5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39432 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g988|b7g988_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39648 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gac5|b7gac5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40052 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g4h1|b7g4h1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47667 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbi3|b7gbi3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40467 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gd45|b7gd45_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41038 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gdf9|b7gdf9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41157 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ge54|b7ge54_phatc' "'(gnl|cdd|33079 : 145.0) no description available & (gnl|cdd|37944 : 131.0) no description available & (chl4|523409 : 121.0) no description available & (at5g39410 : 95.9) Saccharopine dehydrogenase ; LOCATED IN: mitochondrion, plasma membrane, vacuole, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os07g40620.1 : 75.1) no description available & (ipr012335 : 41.110058) no description available & (reliability: 191.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41409 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fsm6|b7fsm6_phatc' '(gnl|cdd|38159 : 348.0) no description available & (gnl|cdd|67314 : 281.0) no description available & (at5g41970 : 280.0) Metal-dependent protein hydrolase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent protein hydrolase (InterPro:IPR003226); BEST Arabidopsis thaliana protein match is: Metal-dependent protein hydrolase (TAIR:AT3G49320.1); Has 677 Blast hits to 672 proteins in 331 species: Archae - 0; Bacteria - 213; Metazoa - 146; Fungi - 144; Plants - 55; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (chl4|519389 : 268.0) no description available & (loc_os02g46150.1 : 261.0) no description available & (ipr003226 : 243.8917) Metal-dependent protein hydrolase & (reliability: 560.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41745 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7frd4|b7frd4_phatc' '(loc_os02g58650.1 : 112.0) no description available & (at1g63610 : 101.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|510923 : 65.1) no description available & (reliability: 202.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42457 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7frk6|b7frk6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42523 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7frq3|b7frq3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42559 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fnu8|b7fnu8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42590 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fnx7|b7fnx7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42612 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fp26|b7fp26_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42654 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fp39|b7fp39_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42663 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpf4|b7fpf4_phatc' "'(gnl|cdd|38368 : 104.0) no description available & (loc_os03g26460.2 : 86.7) no description available & (gnl|cdd|29314 : 78.5) no description available & (chl4|524801 : 77.0) no description available & (at3g03773 : 65.5) HSP20-like chaperones superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT4G02450.2); Has 706 Blast hits to 706 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 125; Plants - 130; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). & (reliability: 131.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42757 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fpi7|b7fpi7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42781 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpj1|b7fpj1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42786 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fps0|b7fps0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42846 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpv1|b7fpv1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42872 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fq00|b7fq00_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42911 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fq44|b7fq44_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42949 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fq81|b7fq81_phatc' "'(gnl|cdd|35763 : 90.8) no description available & (at5g58110 : 62.8) chaperone binding;ATPase activators; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310); Has 297 Blast hits to 292 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 2; Plants - 78; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (chl4|524388 : 61.2) no description available & (q43207|fkb70_wheat : 58.9) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (gnl|cdd|87842 : 58.3) no description available & (loc_os04g28420.1 : 58.2) no description available & (ipr015310 : 35.049603) Activator of Hsp90 ATPase, N-terminal & (reliability: 125.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42981 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fqf2|b7fqf2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43041 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqf6|b7fqf6_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43044 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqs5|b7fqs5_phatc' "'(gnl|cdd|36126 : 114.0) no description available & (gnl|cdd|87041 : 104.0) no description available & (loc_os03g58130.1 : 92.8) no description available & (at3g04780 : 84.7) Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein.; CONTAINS InterPro DOMAIN/s: Thioredoxin, core (InterPro:IPR015467), Proteasome-interacting thioredoxin-like domain, C-terminal (InterPro:IPR010400); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1000) (TAIR:AT2G25950.1); Has 606 Blast hits to 606 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 186; Plants - 75; Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink). & (chl4|517726 : 75.1) no description available & (ipr010400 : 56.82269) PITH domain & (reliability: 169.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43143 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fqu5|b7fqu5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43160 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqz8|b7fqz8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43207 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fr14|b7fr14_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43222 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fr19|b7fr19_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43225 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fr28|b7fr28_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43233 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fr41|b7fr41_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43243 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fr73|b7fr73_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43274 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fry4|b7fry4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43348 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7frz2|b7frz2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43356 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fsn4|b7fsn4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43563 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fsu7|b7fsu7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43609 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ft11|b7ft11_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43658 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ft54|b7ft54_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43694 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ft77|b7ft77_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43716 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ft79|b7ft79_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43718 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftd7|b7ftd7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_43763 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g091|b7g091_phatc' "'(chl4|518943 : 189.0) no description available & (at3g03890 : 187.0) FMN binding; FUNCTIONS IN: FMN binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2470 (InterPro:IPR019595), FMN-binding split barrel (InterPro:IPR012349), Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain (InterPro:IPR011576), FMN-binding split barrel, related (InterPro:IPR009002), Haem iron utilisation protein, pyridoxamine 5'-phosphate domain-containing (InterPro:IPR014599); BEST Arabidopsis thaliana protein match is: Pyridoxamine 5'-phosphate oxidase family protein (TAIR:AT3G21140.1); Has 770 Blast hits to 770 proteins in 270 species: Archae - 0; Bacteria - 458; Metazoa - 13; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). & (loc_os07g38620.1 : 158.0) no description available & (ipr012349 : 99.83214) FMN-binding split barrel & (gnl|cdd|31091 : 68.8) no description available & (gnl|cdd|38584 : 46.6) no description available & (reliability: 374.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_4413 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7ftm5|b7ftm5_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44301 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftm6|b7ftm6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44302 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftr9|b7ftr9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44340 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fts5|b7fts5_phatc' '(gnl|cdd|38234 : 84.3) no description available & (gnl|cdd|67790 : 58.5) no description available & (at5g63220 : 40.8) unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0363 (InterPro:IPR007317); Has 304 Blast hits to 301 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (loc_os01g07100.1 : 35.0) no description available & (reliability: 81.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44343 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fts9|b7fts9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44347 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftu6|b7ftu6_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44357 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ftx2|b7ftx2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44383 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fty3|b7fty3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44393 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fu16|b7fu16_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44420 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fu57|b7fu57_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44450 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fua1|b7fua1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44485 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fua4|b7fua4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44488 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fua5|b7fua5_phatc' '(at1g76200 : 43.9) unknown protein; Has 96 Blast hits to 96 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47; Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (loc_os05g03150.1 : 41.6) no description available & (reliability: 87.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44489 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fuc9|b7fuc9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44510 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fuf0|b7fuf0_phatc' '(gnl|cdd|87898 : 98.8) no description available & (at5g27560 : 61.2) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1995 (InterPro:IPR018962); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g05390.1 : 54.3) no description available & (ipr018962 : 52.553993) Domain of unknown function DUF1995 & (chl4|517932 : 45.4) no description available & (reliability: 122.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44529 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fuk0|b7fuk0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44578 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ful4|b7ful4_phatc' '(gnl|cdd|70520 : 87.0) no description available & (at5g39430 : 86.3) Protein of unknown function (DUF1336); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT3G29180.2); Has 313 Blast hits to 313 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (loc_os12g38850.2 : 73.9) no description available & (chl4|514365 : 54.7) no description available & (ipr009769 : 50.251408) Domain of unknown function DUF1336 & (reliability: 172.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44591 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fur9|b7fur9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44638 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fut7|b7fut7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44651 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fut8|b7fut8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44652 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fuu4|b7fuu4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44659 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fvr9|b7fvr9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44821 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fw20|b7fw20_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44898 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fw24|b7fw24_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44902 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fw47|b7fw47_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44924 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fw76|b7fw76_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44949 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwb8|b7fwb8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45057 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwx0|b7fwx0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45227 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fwy5|b7fwy5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45240 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fx53|b7fx53_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45287 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fxu4|b7fxu4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45479 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fxw9|b7fxw9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45503 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fxy4|b7fxy4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45516 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fy15|b7fy15_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45541 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fy59|b7fy59_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45582 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fy70|b7fy70_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45590 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fy71|b7fy71_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45591 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fy95|b7fy95_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45609 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyb3|b7fyb3_phatc' "'(gnl|cdd|85816 : 100.0) no description available & (loc_os03g53600.1 : 96.3) no description available & (at5g47420 : 94.7) Tryptophan RNA-binding attenuator protein-like; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF124 (InterPro:IPR002838), Tryptophan RNA-binding attenuator protein-like (InterPro:IPR016031); BEST Arabidopsis thaliana protein match is: Tryptophan RNA-binding attenuator protein-like (TAIR:AT4G17420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr002838 : 56.256294) Mitochondrial biogenesis protein AIM24 & (chl4|519325 : 42.4) no description available & (reliability: 189.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45624 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fye8|b7fye8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45653 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyj4|b7fyj4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45689 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyk5|b7fyk5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45701 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyq0|b7fyq0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45797 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyr7|b7fyr7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45811 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyr9|b7fyr9_phatc' "'(at3g58010 : 87.8) plastoglobulin 34kD (PGL34); FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT2G42130.4); Has 158 Blast hits to 158 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 6; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). & (loc_os04g57020.2 : 67.8) no description available & (gnl|cdd|68332 : 48.1) no description available & (reliability: 175.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45813 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7fz26|b7fz26_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45894 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fz76|b7fz76_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45935 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fzv5|b7fzv5_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46046 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fzz4|b7fzz4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46078 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g022|b7g022_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46098 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0a5|b7g0a5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46172 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0k8|b7g0k8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46248 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0p6|b7g0p6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46281 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0u2|b7g0u2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46323 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0v7|b7g0v7_phatc' '(chl4|516290 : 178.0) no description available & (gnl|cdd|68809 : 140.0) no description available & (at3g61320 : 112.0) Bestrophin-like protein; CONTAINS InterPro DOMAIN/s: Bestrophin-like (InterPro:IPR021134); BEST Arabidopsis thaliana protein match is: Bestrophin-like protein (TAIR:AT2G45870.1); Has 1448 Blast hits to 1447 proteins in 512 species: Archae - 0; Bacteria - 1140; Metazoa - 0; Fungi - 113; Plants - 120; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (ipr021134 : 95.11934) Bestrophin/UPF0187 & (loc_os03g01570.2 : 93.2) no description available & (reliability: 224.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46336 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g128|b7g128_phatc' "'(gnl|cdd|70036 : 49.9) no description available & (loc_os12g38640.1 : 37.7) no description available & (at5g08050 : 37.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500), Uncharacterised conserved protein UCP022207 (InterPro:IPR016801); Has 78 Blast hits to 78 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 74.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46395 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g1c2|b7g1c2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46470 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1e0|b7g1e0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46484 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1g0|b7g1g0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46502 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1j1|b7g1j1_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46529 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g1l3|b7g1l3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46547 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g228|b7g228_phatc' ' (original description: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_46991 PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g249|b7g249_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47006 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2g3|b7g2g3_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47103 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2l2|b7g2l2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47134 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2s8|b7g2s8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47187 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2t6|b7g2t6_phatc' '(chl4|513661 : 84.7) no description available & (gnl|cdd|87368 : 68.3) no description available & (gnl|cdd|36261 : 57.0) no description available & (at5g06220 : 46.6) LETM1-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G11560.4). & (loc_os08g37610.1 : 42.4) no description available & (reliability: 93.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47193 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g350|b7g350_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47373 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g395|b7g395_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47403 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g3g2|b7g3g2_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47461 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g3h8|b7g3h8_phatc' '(chl4|525478 : 80.5) no description available & (at2g21385 : 40.8) unknown protein. & (loc_os09g36130.1 : 40.4) no description available & (reliability: 81.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47477 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g3i6|b7g3i6_phatc' "' (original description: Fucoxanthin chlorophyll a/c protein, deviant (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47485 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g3j6|b7g3j6_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47494 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g419|b7g419_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47546 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g451|b7g451_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47573 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g468|b7g468_phatc' "'(gnl|cdd|35763 : 76.5) no description available & (at5g58110 : 57.4) chaperone binding;ATPase activators; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310); Has 297 Blast hits to 292 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 2; Plants - 78; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (gnl|cdd|29151 : 57.0) no description available & (loc_os06g49030.1 : 50.1) no description available & (ipr011990 : 49.592163) Tetratricopeptide-like helical & (chl4|524493 : 42.4) no description available & (reliability: 114.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47589 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g469|b7g469_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47590 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g4a0|b7g4a0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47612 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g4e3|b7g4e3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47648 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g4f8|b7g4f8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47657 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g500|b7g500_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47811 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g571|b7g571_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47869 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g593|b7g593_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47887 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5d1|b7g5d1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47922 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5h0|b7g5h0_phatc' '(gnl|cdd|70501 : 82.8) no description available & (gnl|cdd|38248 : 71.3) no description available & (loc_os12g19350.1 : 54.3) no description available & (at3g27460 : 47.4) SGF29 tudor-like domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SAGA-associated factor 29 (InterPro:IPR010750); BEST Arabidopsis thaliana protein match is: SGF29 tudor-like domain (TAIR:AT5G40550.2); Has 324 Blast hits to 324 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 113; Plants - 51; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (ipr010750 : 46.74485) SGF29 tudor-like domain & (chl4|511685 : 35.8) no description available & (reliability: 94.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47951 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5j6|b7g5j6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47973 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5l8|b7g5l8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47994 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5x8|b7g5x8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48085 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5y0|b7g5y0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48087 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5z2|b7g5z2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48094 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6b0|b7g6b0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48195 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6b4|b7g6b4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48198 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6c0|b7g6c0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48203 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6c7|b7g6c7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48211 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6f8|b7g6f8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48233 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6h1|b7g6h1_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48245 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6h7|b7g6h7_phatc' '(gnl|cdd|70837 : 57.7) no description available & (chl4|512167 : 40.4) no description available & (loc_os03g64140.1 : 40.0) no description available & (at3g60810 : 39.3) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 78.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48250 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6q0|b7g6q0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48313 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6r0|b7g6r0_phatc' '(chl4|518572 : 77.4) no description available & (at1g65900 : 62.4) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (loc_os03g02820.1 : 55.8) no description available & (gnl|cdd|30959 : 42.2) no description available & (reliability: 124.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48322 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g6y2|b7g6y2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48383 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g714|b7g714_phatc' "'(gnl|cdd|38184 : 112.0) no description available & (gnl|cdd|86526 : 68.1) no description available & (loc_os10g26660.2 : 62.4) no description available & (at1g14300 : 61.6) ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0507 (InterPro:IPR007205), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Uncharacterised protein family UPF0507, C-terminal (InterPro:IPR007206). & (chl4|509970 : 59.7) no description available & (ipr007205 : 53.652603) FAM203 N-terminal & (reliability: 123.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48410 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g732|b7g732_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48426 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g746|b7g746_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48436 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g799|b7g799_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48476 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7i0|b7g7i0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48507 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7i4|b7g7i4_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48511 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7k9|b7g7k9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48533 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7r3|b7g7r3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48580 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7u2|b7g7u2_phatc' "'(gnl|cdd|70433 : 71.8) no description available & (gnl|cdd|39849 : 67.4) no description available & (chl4|519820 : 58.9) no description available & (loc_os03g50070.1 : 57.0) no description available & (at1g73650 : 55.1) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 110.2) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48600 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g7w0|b7g7w0_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48613 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g833|b7g833_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48680 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7d1|b7g7d1_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48686 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g7f7|b7g7f7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48704 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g866|b7g866_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48730 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8h3|b7g8h3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48817 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8p6|b7g8p6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48879 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8s0|b7g8s0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48895 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8s9|b7g8s9_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48901 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8t7|b7g8t7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48909 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8v8|b7g8v8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48921 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g8y0|b7g8y0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48938 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g927|b7g927_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48972 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9c2|b7g9c2_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49053 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9c6|b7g9c6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49056 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9g6|b7g9g6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49091 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9k6|b7g9k6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49127 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9m0|b7g9m0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49140 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9n5|b7g9n5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49151 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9s1|b7g9s1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49186 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9t6|b7g9t6_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49202 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9u8|b7g9u8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49212 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9z5|b7g9z5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49248 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ga38|b7ga38_phatc' '(gnl|cdd|31017 : 52.2) no description available & (at1g27030 : 36.2) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27020.1); Has 504 Blast hits to 502 proteins in 169 species: Archae - 0; Bacteria - 299; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 72.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49287 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gau8|b7gau8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49509 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gaw6|b7gaw6_phatc' "'(gnl|cdd|33008 : 146.0) no description available & (ipr018020 : 105.17698) Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase & (chl4|517848 : 95.1) no description available & (loc_os03g27320.3 : 84.3) no description available & (gnl|cdd|38216 : 82.8) no description available & (at5g58220 : 69.3) Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.; transthyretin-like protein (TTL); FUNCTIONS IN: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity, hydroxyisourate hydrolase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling pathway, protein homotetramerization; LOCATED IN: cytosol, extrinsic to internal side of plasma membrane, peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR017129), Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (InterPro:IPR018020), Hydroxyisourate hydrolase (InterPro:IPR014306), Transthyretin/hydroxyisourate hydrolase (InterPro:IPR000895); Has 3236 Blast hits to 3236 proteins in 817 species: Archae - 6; Bacteria - 1906; Metazoa - 529; Fungi - 103; Plants - 58; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (reliability: 138.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49522 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7gb64|b7gb64_phatc' ' (original description: Alanine glyoxylate aminotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49601 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbb0|b7gbb0_phatc' '(gnl|cdd|86064 : 62.3) no description available & (ipr003819 : 58.31965) Taurine catabolism dioxygenase TauD/TfdA & (at3g21360 : 40.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (gnl|cdd|39092 : 35.4) no description available & (reliability: 80.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49639 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbb7|b7gbb7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49647 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbf3|b7gbf3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49678 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbh3|b7gbh3_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49693 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbq7|b7gbq7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49738 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbv5|b7gbv5_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49779 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbv8|b7gbv8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49782 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gbx1|b7gbx1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49791 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gc65|b7gc65_phatc' '(at1g18060 : 62.8) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (loc_os01g03040.1 : 53.9) no description available & (chl4|526112 : 51.2) no description available & (reliability: 125.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49879 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gcf7|b7gcf7_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49957 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gcr2|b7gcr2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50047 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gd91|b7gd91_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50191 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gd98|b7gd98_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50195 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gdf6|b7gdf6_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50245 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gdh0|b7gdh0_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50256 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gdy7|b7gdy7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50388 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ge29|b7ge29_phatc' "'(gnl|cdd|37407 : 68.6) no description available & (chl4|516614 : 48.1) no description available & (gnl|cdd|65380 : 48.0) no description available & (loc_os01g63780.1 : 42.0) no description available & (at2g45000 : 38.5) EMBRYO DEFECTIVE 2766 (EMB2766); FUNCTIONS IN: structural constituent of nuclear pore; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin, Nsp1-like, C-terminal (InterPro:IPR007758); Has 235342 Blast hits to 95277 proteins in 3388 species: Archae - 819; Bacteria - 58190; Metazoa - 65863; Fungi - 46438; Plants - 10106; Viruses - 2707; Other Eukaryotes - 51219 (source: NCBI BLink). & (reliability: 77.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50425 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7ge47|b7ge47_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50441 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ge71|b7ge71_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50464 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ge85|b7ge85_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50480 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gea5|b7gea5_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50499 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gee8|b7gee8_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50535 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gef8|b7gef8_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50544 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7gel9|b7gel9_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50592 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7ger1|b7ger1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50625 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9b2|b7g9b2_phatc' ' no hits & (original description: Cell surface protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_52498 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fqb2|b7fqb2_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54026 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fyl4|b7fyl4_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54466 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g2a6|b7g2a6_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54686 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g5r1|b7g5r1_phatc' ' (original description: Dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54834 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g9b0|b7g9b0_phatc' ' no hits & (original description: Cell surface protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54986 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7fpi8|b7fpi8_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_9046 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7s413|b7s413_phatc' "'(gnl|cdd|48666 : 107.0) no description available & (chl4|513797 : 49.7) no description available & (at3g16270 : 44.7) ENTH/VHS family protein; INVOLVED IN: intracellular protein transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), Epsin, N-terminal (InterPro:IPR001026), ENTH/VHS (InterPro:IPR008942); Has 168 Blast hits to 159 proteins in 72 species: Archae - 0; Bacteria - 9; Metazoa - 51; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (loc_os01g13160.1 : 43.1) no description available & (gnl|cdd|37210 : 40.4) no description available & (reliability: 89.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1316 PE=4 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7s4e5|b7s4e5_phatc' ' (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1471 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7s3y7|b7s3y7_phatc' ' no hits & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1639 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7s406|b7s406_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1649 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7s3l1|b7s3l1_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd626 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7s488|b7s488_phatc' ' (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd748 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7frd6|b7frd6_phatc' ' (original description: Phosphoserine transaminase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PSAT PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'sp|a0t0c6|cy550_phatc' ' (original description: Cytochrome c-550 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=psbV PE=3 SV=1)' P '35.2' 'not assigned.unknown' 'sp|a0t0f5|rk35_phatc' "' (original description: 50S ribosomal protein L35, chloroplastic OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=rpl35 PE=3 SV=1)'" P '35.2' 'not assigned.unknown' 'tr|b7g1f1|b7g1f1_phatc' ' (original description: Tic22 protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tic22 PE=4 SV=1)' P '35.2' 'not assigned.unknown' 'tr|b7g0v1|b7g0v1_phatc' ' (original description: TRD3 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TRD3 PE=4 SV=1)' P '4.1.10' 'glycolysis.cytosolic branch.aldolase' 'tr|b7ge67|b7ge67_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|84661 : 532.0) no description available & (gnl|cdd|36770 : 467.0) no description available & (at4g38970 : 367.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 366.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (loc_os11g07020.1 : 366.0) no description available & (chl4|522439 : 350.0) no description available & (reliability: 718.0) & (original description: Fructose-bisphosphate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FbaC5 PE=3 SV=1)'" P '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'tr|b7g938|b7g938_phatc' "'(ipr001576 : 1500.0) Phosphoglycerate kinase & (gnl|cdd|80491 : 540.0) no description available & (gnl|cdd|36581 : 450.0) no description available & (chl4|520052 : 437.0) no description available & (q9sbn4|pgkh_volca : 435.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 424.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (loc_os02g07260.2 : 420.0) no description available & (reliability: 832.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGK PE=3 SV=1)'" P '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'tr|b7g5g4|b7g5g4_phatc' "'(ipr001576 : 1500.0) Phosphoglycerate kinase & (gnl|cdd|80491 : 560.0) no description available & (chl4|520052 : 500.0) no description available & (q9sbn4|pgkh_volca : 494.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at1g56190 : 476.0) Phosphoglycerate kinase family protein; FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: glycolysis; LOCATED IN: thylakoid, mitochondrion, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: phosphoglycerate kinase 1 (TAIR:AT3G12780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g07260.2 : 470.0) no description available & (gnl|cdd|36581 : 437.0) no description available & (reliability: 908.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29157 PE=3 SV=1)'" P '4.1.11' 'glycolysis.cytosolic branch.3-phosphoglycerate kinase (PGK)' 'tr|b7g6h0|b7g6h0_phatc' "'(gnl|cdd|80491 : 429.0) no description available & (gnl|cdd|36581 : 350.0) no description available & (ipr001576 : 285.11508) Phosphoglycerate kinase & (p29409|pgkh_spiol : 285.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) (Fragment) - Spinacia oleracea (Spinach) & (at3g12780 : 276.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (chl4|520052 : 271.0) no description available & (loc_os06g45710.1 : 268.0) no description available & (reliability: 550.0) & (original description: Phosphoglycerate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51125 PE=3 SV=1)'" P '4.1.13' 'glycolysis.cytosolic branch.enolase' 'tr|b7gef2|b7gef2_phatc' "'(gnl|cdd|48188 : 632.0) no description available & (gnl|cdd|37881 : 613.0) no description available & (q43130|eno_mescr : 512.0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) - Mesembryanthemum crystallinum (Common ice plant) & (at2g36530 : 511.0) Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2); FUNCTIONS IN: phosphopyruvate hydratase activity, copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, response to cold, response to light stimulus, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Enolase (InterPro:IPR000941), Enolase, C-terminal (InterPro:IPR020810), Enolase, conserved site (InterPro:IPR020809), Enolase, N-terminal (InterPro:IPR020811); BEST Arabidopsis thaliana protein match is: enolase 1 (TAIR:AT1G74030.1); Has 13396 Blast hits to 13370 proteins in 3710 species: Archae - 270; Bacteria - 5735; Metazoa - 2292; Fungi - 281; Plants - 265; Viruses - 0; Other Eukaryotes - 4553 (source: NCBI BLink). & (loc_os10g08550.1 : 511.0) no description available & (chl4|513127 : 492.0) no description available & (ipr020810 : 296.50284) Enolase, C-terminal & (reliability: 1022.0) & (original description: Plastidic enolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_56468 PE=3 SV=1)'" P '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'tr|b7g6z9|b7g6z9_phatc' "'(gnl|cdd|81902 : 544.0) no description available & (gnl|cdd|37534 : 323.0) no description available & (ipr015793 : 237.72838) Pyruvate kinase, barrel & (loc_os10g42100.1 : 232.0) no description available & (at1g32440 : 223.0) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.; plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink). & (q42954|kpyc_tobac : 222.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (chl4|513548 : 215.0) no description available & (reliability: 862.02466) & (original description: Pyruvate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PK1 PE=3 SV=1)'" P '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'tr|b7g9h4|b7g9h4_phatc' "'(ipr015793 : 1500.0) Pyruvate kinase, barrel & (gnl|cdd|29370 : 539.0) no description available & (gnl|cdd|37534 : 493.0) no description available & (at5g63680 : 447.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink). & (chl4|513548 : 445.0) no description available & (loc_os04g58110.1 : 442.0) no description available & (q42806|kpyc_soybn : 435.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 3519.0) & (original description: Pyruvate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PK2 PE=3 SV=1)'" P '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'tr|b7g9g7|b7g9g7_phatc' "'(ipr015793 : 1500.0) Pyruvate kinase, barrel & (gnl|cdd|29370 : 532.0) no description available & (gnl|cdd|37534 : 470.0) no description available & (chl4|513548 : 442.0) no description available & (at5g63680 : 438.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink). & (loc_os04g58110.1 : 437.0) no description available & (q42806|kpyc_soybn : 435.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (reliability: 3501.0) & (original description: Pyruvate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PK3 PE=3 SV=1)'" P '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'tr|b7g961|b7g961_phatc' "'(gnl|cdd|29370 : 470.0) no description available & (gnl|cdd|37534 : 393.0) no description available & (chl4|513548 : 336.0) no description available & (at5g63680 : 325.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink). & (q42806|kpyc_soybn : 321.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Glycine max (Soybean) & (loc_os01g16960.1 : 304.0) no description available & (ipr015793 : 271.8104) Pyruvate kinase, barrel & (reliability: 1125.6682) & (original description: Pyruvate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PK5 PE=3 SV=1)'" P '4.1.14' 'glycolysis.cytosolic branch.pyruvate kinase (PK)' 'tr|b7gbb9|b7gbb9_phatc' "'(gnl|cdd|81761 : 441.0) no description available & (gnl|cdd|37534 : 378.0) no description available & (loc_os01g16960.1 : 287.0) no description available & (at5g63680 : 281.0) Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink). & (q42954|kpyc_tobac : 280.0) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK) - Nicotiana tabacum (Common tobacco) & (chl4|513548 : 268.0) no description available & (ipr015793 : 254.71147) Pyruvate kinase, barrel & (reliability: 1007.7451) & (original description: Pyruvate kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PK6 PE=3 SV=1)'" P '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'tr|b7g1g6|b7g1g6_phatc' "'(gnl|cdd|80444 : 887.0) no description available & (p51063|capp_picab : 581.0) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) - Picea abies (Norway spruce) (Picea excelsa) & (at2g42600 : 578.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink). & (loc_os02g14770.3 : 577.0) no description available & (chl4|520898 : 428.0) no description available & (ipr021135 : 171.56248) Phosphoenolpyruvate carboxylase & (reliability: 1156.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PEPCase_1 PE=3 SV=1)'" P '4.1.15' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase (PEPC)' 'tr|b7g725|b7g725_phatc' "'(gnl|cdd|80444 : 852.0) no description available & (at2g42600 : 591.0) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.; phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink). & (loc_os02g14770.3 : 590.0) no description available & (p04711|capp1_maize : 589.0) Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31) (PEPCase 1) (PEPC 1) - Zea mays (Maize) & (chl4|520898 : 446.0) no description available & (ipr021135 : 166.83595) Phosphoenolpyruvate carboxylase & (reliability: 1182.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PEPCase_2 PE=3 SV=1)'" P '4.1.16' 'glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK)' 'tr|b7fum9|b7fum9_phatc' "'(gnl|cdd|29142 : 292.0) no description available & (gnl|cdd|35256 : 283.0) no description available & (chl4|510399 : 216.0) no description available & (loc_os01g59360.1 : 201.0) no description available & (at1g12580 : 200.0) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink). & (q6ret7|ccamk_medtr : 199.0) Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 (EC 2.7.11.17) (Does not make infections protein 3) (CCaMK DMI3) (MtCCaMK) - Medicago truncatula (Barrel medic) & (ipr017442 : 162.2026) no description available & (reliability: 400.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=chk2 PE=3 SV=1)'" P '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'tr|b7ge51|b7ge51_phatc' "'(gnl|cdd|35844 : 735.0) no description available & (at1g70730 : 663.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (p93262|pgmc_mescr : 657.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Mesembryanthemum crystallinum (Common ice plant) & (loc_os03g50480.1 : 629.0) no description available & (chl4|514928 : 587.0) no description available & (gnl|cdd|30382 : 443.0) no description available & (ipr002618 : 206.20303) UTP--glucose-1-phosphate uridylyltransferase & (reliability: 1326.0) & (original description: UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UGP/PGM PE=4 SV=1)'" P '4.1.2' 'glycolysis.cytosolic branch.phosphoglucomutase (PGM)' 'tr|b7fse5|b7fse5_phatc' "'(gnl|cdd|35844 : 657.0) no description available & (p93805|pgmc2_maize : 548.0) Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2) - Zea mays (Maize) & (loc_os03g50480.1 : 543.0) no description available & (at1g70730 : 542.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (chl4|514927 : 522.0) no description available & (gnl|cdd|82275 : 422.0) no description available & (ipr016055 : 121.77464) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III & (reliability: 1084.0) & (original description: Mutase phosphoglucomutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGM_1 PE=4 SV=1)'" P '4.1.3' 'glycolysis.cytosolic branch.glucose-6-phosphate isomerase' 'tr|b7gdk9|b7gdk9_phatc' "'(ipr001672 : 1500.0) Phosphoglucose isomerase (PGI) & (gnl|cdd|37657 : 745.0) no description available & (gnl|cdd|80564 : 713.0) no description available & (chl4|520974 : 501.0) no description available & (p42863|g6pib_orysa : 464.0) Glucose-6-phosphate isomerase, cytosolic B (EC 5.3.1.9) (GPI-B) (Phosphoglucose isomerase B) (PGI-B) (Phosphohexose isomerase B) (PHI-B) - Oryza sativa (Rice) & (loc_os06g14510.3 : 464.0) no description available & (at5g42740 : 447.0) Sugar isomerase (SIS) family protein; FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, gluconeogenesis, glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: phosphoglucose isomerase 1 (TAIR:AT4G24620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3519.0) & (original description: Glucose-6-phosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GPI_1 PE=3 SV=1)'" P '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'tr|b7g4j8|b7g4j8_phatc' "'(gnl|cdd|82016 : 463.0) no description available & (loc_os10g26570.1 : 361.0) no description available & (at4g32840 : 360.0) phosphofructokinase 6 (PFK6); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 1 (TAIR:AT4G29220.1); Has 8046 Blast hits to 7506 proteins in 2189 species: Archae - 28; Bacteria - 5254; Metazoa - 679; Fungi - 399; Plants - 394; Viruses - 4; Other Eukaryotes - 1288 (source: NCBI BLink). & (chl4|513965 : 315.0) no description available & (gnl|cdd|37651 : 248.0) no description available & (ipr000023 : 66.5126) Phosphofructokinase domain & (p21343|pfpb_soltu : 64.3) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (reliability: 836.39703) & (original description: Pyrophosphate-dependent phosphofructose kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PFK1 PE=4 SV=1)'" P '4.1.4' 'glycolysis.cytosolic branch.phosphofructokinase (PFK)' 'tr|b7gcg9|b7gcg9_phatc' "'(gnl|cdd|75633 : 463.0) no description available & (at5g56630 : 81.6) phosphofructokinase 7 (PFK7); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g05860.1 : 77.8) no description available & (p21343|pfpb_soltu : 56.6) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (gnl|cdd|37651 : 54.2) no description available & (chl4|513965 : 47.8) no description available & (reliability: 155.6) & (original description: Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55126 PE=3 SV=1)'" P '4.1.6' "'glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase)'" 'tr|b7fph5|b7fph5_phatc' "'(gnl|cdd|35455 : 381.0) no description available & (at1g07110 : 331.0) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.; ""fructose-2,6-bisphosphatase"" (F2KP); FUNCTIONS IN: fructose-2,6-bisphosphate 2-phosphatase activity; INVOLVED IN: N-terminal protein myristoylation, fructose metabolic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphate 2-phosphatase (InterPro:IPR016260), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Fructose-2,6-bisphosphatase (InterPro:IPR003094), Carbohydrate-binding-like fold (InterPro:IPR013784), Glycoside hydrolase, carbohydrate-binding (InterPro:IPR002044), Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), 6-phosphofructo-2-kinase (InterPro:IPR013079); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 5078 Blast hits to 4946 proteins in 1364 species: Archae - 8; Bacteria - 3312; Metazoa - 533; Fungi - 529; Plants - 140; Viruses - 0; Other Eukaryotes - 556 (source: NCBI BLink). & (loc_os05g07130.2 : 331.0) no description available & (chl4|516066 : 261.0) no description available & (gnl|cdd|85552 : 218.0) no description available & (ipr013079 : 140.05223) 6-phosphofructo-2-kinase & (reliability: 662.0) & (original description: Bifunctional 6-phosphofructo-2-kinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PF2K1 PE=4 SV=1)'" P '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'tr|b7fsq0|b7fsq0_phatc' "'(gnl|cdd|80468 : 279.0) no description available & (gnl|cdd|36856 : 202.0) no description available & (ipr013785 : 185.20107) Aldolase-type TIM barrel & (loc_os09g36450.1 : 171.0) no description available & (p46225|tpic_secce : 169.0) Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 167.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (chl4|511212 : 159.0) no description available & (reliability: 302.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18228 PE=3 SV=1)'" P '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'tr|b7ft67|b7ft67_phatc' "'(gnl|cdd|80468 : 268.0) no description available & (gnl|cdd|36856 : 200.0) no description available & (ipr013785 : 188.28136) Aldolase-type TIM barrel & (loc_os09g36450.1 : 176.0) no description available & (p12863|tpis_maize : 173.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Zea mays (Maize) & (at2g21170 : 166.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (chl4|511212 : 155.0) no description available & (reliability: 306.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_50738 PE=3 SV=1)'" P '4.1.7' 'glycolysis.cytosolic branch.triosephosphate isomerase (TPI)' 'tr|b7g3c1|b7g3c1_phatc' "'(gnl|cdd|36856 : 296.0) no description available & (gnl|cdd|73362 : 295.0) no description available & (p12863|tpis_maize : 246.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Zea mays (Maize) & (loc_os01g05490.1 : 238.0) no description available & (at3g55440 : 230.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (chl4|511212 : 219.0) no description available & (ipr013785 : 207.81247) Aldolase-type TIM barrel & (reliability: 460.0) & (original description: Triosephosphate isomerase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TIM_1 PE=3 SV=1)'" P '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7gc94|b7gc94_phatc' "'(gnl|cdd|82756 : 425.0) no description available & (chl4|525071 : 357.0) no description available & (q09054|g3pd_maize : 259.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 (EC 1.2.1.12) - Zea mays (Maize) & (at1g79530 : 253.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (loc_os08g03290.1 : 253.0) no description available & (gnl|cdd|35876 : 187.0) no description available & (ipr016040 : 135.0196) NAD(P)-binding domain & (reliability: 478.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GAPDH_3 PE=3 SV=1)'" P '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7g6k6|b7g6k6_phatc' "'(gnl|cdd|30406 : 429.0) no description available & (p34923|g3pc_phypa : 407.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Physcomitrella patens (Moss) & (at1g13440 : 395.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (chl4|512522 : 395.0) no description available & (loc_os08g03290.1 : 394.0) no description available & (gnl|cdd|35876 : 333.0) no description available & (ipr016040 : 168.22797) NAD(P)-binding domain & (reliability: 790.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC2a PE=3 SV=1)'" P '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7g5q1|b7g5q1_phatc' "'(gnl|cdd|30406 : 399.0) no description available & (loc_os04g40950.1 : 387.0) no description available & (q43247|g3pe_maize : 385.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12) - Zea mays (Maize) & (at1g13440 : 370.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (chl4|512522 : 353.0) no description available & (gnl|cdd|35876 : 296.0) no description available & (ipr020829 : 156.04515) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain & (reliability: 740.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC1 PE=3 SV=1)'" P '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7fsi4|b7fsi4_phatc' "'(q09054|g3pd_maize : 443.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 (EC 1.2.1.12) - Zea mays (Maize) & (at1g13440 : 441.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (loc_os02g38920.1 : 439.0) no description available & (gnl|cdd|30406 : 426.0) no description available & (chl4|512522 : 407.0) no description available & (gnl|cdd|35876 : 350.0) no description available & (ipr016040 : 172.16325) NAD(P)-binding domain & (reliability: 882.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC4 PE=3 SV=1)'" P '4.1.8' 'glycolysis.cytosolic branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7fsi3|b7fsi3_phatc' "'(gnl|cdd|30406 : 436.0) no description available & (loc_os06g45590.1 : 394.0) no description available & (at1g79530 : 393.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (p08735|g3pc_maize : 392.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 (EC 1.2.1.12) - Zea mays (Maize) & (gnl|cdd|35876 : 364.0) no description available & (chl4|512522 : 362.0) no description available & (ipr013785 : 215.44975) Aldolase-type TIM barrel & (reliability: 772.0) & (original description: Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TPI/GapC3 PE=3 SV=1)'" P '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'tr|b7gei2|b7gei2_phatc' "'(gnl|cdd|30933 : 331.0) no description available & (gnl|cdd|35456 : 236.0) no description available & (chl4|520789 : 171.0) no description available & (loc_os02g51590.1 : 159.0) no description available & (at1g22170 : 155.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (ipr013078 : 88.84531) Histidine phosphatase superfamily, clade-1 & (reliability: 310.0) & (original description: Phosphoglycerate mutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGAM_4 PE=3 SV=1)'" P '4.2.12' 'glycolysis.plastid branch.phosphoglycerate mutase' 'tr|b7fu06|b7fu06_phatc' "'(gnl|cdd|30933 : 328.0) no description available & (gnl|cdd|35456 : 229.0) no description available & (chl4|520789 : 182.0) no description available & (loc_os02g51590.1 : 181.0) no description available & (at1g22170 : 171.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (ipr013078 : 80.864914) Histidine phosphatase superfamily, clade-1 & (reliability: 342.0) & (original description: Phosphoglycerate mutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGAM_6 PE=3 SV=1)'" P '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'tr|b7ge51|b7ge51_phatc' "'(gnl|cdd|35844 : 735.0) no description available & (at1g70730 : 663.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (p93262|pgmc_mescr : 657.0) Phosphoglucomutase, cytoplasmic (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Mesembryanthemum crystallinum (Common ice plant) & (loc_os03g50480.1 : 629.0) no description available & (chl4|514928 : 587.0) no description available & (gnl|cdd|30382 : 443.0) no description available & (ipr002618 : 206.20303) UTP--glucose-1-phosphate uridylyltransferase & (reliability: 1200.0) & (original description: UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=UGP/PGM PE=4 SV=1)'" P '4.2.2' 'glycolysis.plastid branch.phosphoglucomutase (PGM)' 'tr|b7fse5|b7fse5_phatc' "'(gnl|cdd|35844 : 657.0) no description available & (p93805|pgmc2_maize : 548.0) Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2) - Zea mays (Maize) & (loc_os03g50480.1 : 543.0) no description available & (at1g70730 : 542.0) Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.; Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). & (chl4|514927 : 522.0) no description available & (gnl|cdd|82275 : 422.0) no description available & (ipr016055 : 121.77464) Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III & (reliability: 1060.0) & (original description: Mutase phosphoglucomutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGM_1 PE=4 SV=1)'" P '4.2.4' 'glycolysis.plastid branch.phosphofructokinase (PFK)' 'tr|b7gcg9|b7gcg9_phatc' "'(gnl|cdd|75633 : 463.0) no description available & (at5g56630 : 81.6) phosphofructokinase 7 (PFK7); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g05860.1 : 77.8) no description available & (p21343|pfpb_soltu : 56.6) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (gnl|cdd|37651 : 54.2) no description available & (chl4|513965 : 47.8) no description available & (reliability: 151.8) & (original description: Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55126 PE=3 SV=1)'" P '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7gc94|b7gc94_phatc' "'(gnl|cdd|82756 : 425.0) no description available & (chl4|525071 : 357.0) no description available & (q09054|g3pd_maize : 259.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 (EC 1.2.1.12) - Zea mays (Maize) & (at1g79530 : 253.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (loc_os08g03290.1 : 253.0) no description available & (gnl|cdd|35876 : 187.0) no description available & (ipr016040 : 135.0196) NAD(P)-binding domain & (reliability: 506.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GAPDH_3 PE=3 SV=1)'" P '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7g6k6|b7g6k6_phatc' "'(gnl|cdd|30406 : 429.0) no description available & (p34923|g3pc_phypa : 407.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Physcomitrella patens (Moss) & (at1g13440 : 395.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (chl4|512522 : 395.0) no description available & (loc_os08g03290.1 : 394.0) no description available & (gnl|cdd|35876 : 333.0) no description available & (ipr016040 : 168.22797) NAD(P)-binding domain & (reliability: 770.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC2a PE=3 SV=1)'" P '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7g5q1|b7g5q1_phatc' "'(gnl|cdd|30406 : 399.0) no description available & (loc_os04g40950.1 : 387.0) no description available & (q43247|g3pe_maize : 385.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12) - Zea mays (Maize) & (at1g13440 : 370.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (chl4|512522 : 353.0) no description available & (gnl|cdd|35876 : 296.0) no description available & (ipr020829 : 156.04515) Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain & (reliability: 738.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC1 PE=3 SV=1)'" P '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7fsi4|b7fsi4_phatc' "'(q09054|g3pd_maize : 443.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 (EC 1.2.1.12) - Zea mays (Maize) & (at1g13440 : 441.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (loc_os02g38920.1 : 439.0) no description available & (gnl|cdd|30406 : 426.0) no description available & (chl4|512522 : 407.0) no description available & (gnl|cdd|35876 : 350.0) no description available & (ipr016040 : 172.16325) NAD(P)-binding domain & (reliability: 860.0) & (original description: Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=GapC4 PE=3 SV=1)'" P '4.2.8' 'glycolysis.plastid branch.glyceraldehyde 3-phosphate dehydrogenase (GAP-DH)' 'tr|b7fsi3|b7fsi3_phatc' "'(gnl|cdd|30406 : 436.0) no description available & (loc_os06g45590.1 : 394.0) no description available & (at1g79530 : 393.0) Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 (GAPCP-1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plastid, membrane; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase of plastid 2 (TAIR:AT1G16300.1); Has 25337 Blast hits to 25325 proteins in 6357 species: Archae - 82; Bacteria - 10921; Metazoa - 2380; Fungi - 2852; Plants - 3837; Viruses - 0; Other Eukaryotes - 5265 (source: NCBI BLink). & (p08735|g3pc_maize : 392.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 (EC 1.2.1.12) - Zea mays (Maize) & (gnl|cdd|35876 : 364.0) no description available & (chl4|512522 : 362.0) no description available & (ipr013785 : 215.44975) Aldolase-type TIM barrel & (reliability: 786.0) & (original description: Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=TPI/GapC3 PE=3 SV=1)'" P '4.3.10' 'glycolysis.unclear/dually targeted.aldolase' 'tr|b7ge67|b7ge67_phatc' "'(ipr013785 : 1500.0) Aldolase-type TIM barrel & (gnl|cdd|84661 : 532.0) no description available & (gnl|cdd|36770 : 467.0) no description available & (at4g38970 : 367.0) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40677|alfc_orysa : 366.0) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) - Oryza sativa (Rice) & (loc_os11g07020.1 : 366.0) no description available & (chl4|522439 : 350.0) no description available & (reliability: 698.0) & (original description: Fructose-bisphosphate aldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=FbaC5 PE=3 SV=1)'" P '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'tr|b7gei2|b7gei2_phatc' "'(gnl|cdd|30933 : 331.0) no description available & (gnl|cdd|35456 : 236.0) no description available & (chl4|520789 : 171.0) no description available & (loc_os02g51590.1 : 159.0) no description available & (at1g22170 : 155.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (ipr013078 : 88.84531) Histidine phosphatase superfamily, clade-1 & (reliability: 302.0) & (original description: Phosphoglycerate mutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGAM_4 PE=3 SV=1)'" P '4.3.12' 'glycolysis.unclear/dually targeted.phosphoglycerate mutase' 'tr|b7fu06|b7fu06_phatc' "'(gnl|cdd|30933 : 328.0) no description available & (gnl|cdd|35456 : 229.0) no description available & (chl4|520789 : 182.0) no description available & (loc_os02g51590.1 : 181.0) no description available & (at1g22170 : 171.0) Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink). & (ipr013078 : 80.864914) Histidine phosphatase superfamily, clade-1 & (reliability: 326.0) & (original description: Phosphoglycerate mutase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PGAM_6 PE=3 SV=1)'" P '4.3.4' 'glycolysis.unclear/dually targeted.phosphofructokinase (PFK)' 'tr|b7gcg9|b7gcg9_phatc' "'(gnl|cdd|75633 : 463.0) no description available & (at5g56630 : 81.6) phosphofructokinase 7 (PFK7); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os06g05860.1 : 77.8) no description available & (p21343|pfpb_soltu : 56.6) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Solanum tuberosum (Potato) & (gnl|cdd|37651 : 54.2) no description available & (chl4|513965 : 47.8) no description available & (reliability: 163.2) & (original description: Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_55126 PE=3 SV=1)'" P '5.10' 'fermentation.aldehyde dehydrogenase' 'tr|b7gcn0|b7gcn0_phatc' "'(gnl|cdd|37667 : 422.0) no description available & (at1g44170 : 293.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (loc_os11g08300.1 : 282.0) no description available & (gnl|cdd|31216 : 256.0) no description available & (ipr015590 : 152.23198) Aldehyde dehydrogenase domain & (p28237|badh_betvu : 112.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (chl4|511299 : 107.0) no description available & (reliability: 586.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_16540 PE=3 SV=1)'" P '6.3' 'gluconeogenesis / glyoxylate cycle.Malate DH' 'tr|b7geg9|b7geg9_phatc' "'(gnl|cdd|58492 : 443.0) no description available & (gnl|cdd|36707 : 429.0) no description available & (p83373|mdhm_fraan : 347.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (chl4|512496 : 338.0) no description available & (at3g15020 : 337.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (loc_os01g46070.1 : 335.0) no description available & (ipr015955 : 135.44705) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal & (reliability: 632.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=MDH PE=3 SV=1)'" P '6.4' 'gluconeogenesis / glyoxylate cycle.PEPCK' 'tr|b7ga05|b7ga05_phatc' "'(ipr001272 : 1500.0) Phosphoenolpyruvate carboxykinase, ATP-utilising & (gnl|cdd|82942 : 775.0) no description available & (chl4|519867 : 445.0) no description available & (loc_os03g15050.2 : 426.0) no description available & (at4g37870 : 424.0) Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).; phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink). & (q9slz0|pepck_maize : 408.0) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) - Zea mays (Maize) & (reliability: 3473.0) & (original description: Phosphoenolpyruvate carboxykinase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PEPCK1 PE=3 SV=1)'" P '6.5' 'gluconeogenesis / glyoxylate cycle.pyruvate dikinase' 'tr|b7g585|b7g585_phatc' "'(gnl|cdd|82908 : 1237.0) no description available & (q42910|ppdk_mescr : 859.0) Pyruvate, phosphate dikinase, chloroplast precursor (EC 2.7.9.1) (Pyruvate, orthophosphate dikinase) - Mesembryanthemum crystallinum (Common ice plant) & (at4g15530 : 858.0) Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.; pyruvate orthophosphate dikinase (PPDK); FUNCTIONS IN: kinase activity, pyruvate, phosphate dikinase activity; INVOLVED IN: phosphorylation, response to absence of light; LOCATED IN: cytosol, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192), PEP-utilising enzyme, mobile domain (InterPro:IPR008279), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), PEP-utilising enzyme, mobile region, conserved site (InterPro:IPR018274), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), PEP-utilising enzyme (InterPro:IPR000121), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), Pyruvate, phosphate dikinase (InterPro:IPR010121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g33570.2 : 843.0) no description available & (chl4|509718 : 828.0) no description available & (ipr015813 : 263.9218) Pyruvate/Phosphoenolpyruvate kinase & (reliability: 1918.7975) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PPdK PE=4 SV=1)'" P '7.1.3' 'OPP.oxidative PP.6-phosphogluconate dehydrogenase' 'tr|b7fpf9|b7fpf9_phatc' "'(loc_os02g35500.1 : 211.0) no description available & (at1g17650 : 208.0) Glyoxylate reductase located in chloroplasts.; glyoxylate reductase 2 (GLYR2); FUNCTIONS IN: phosphogluconate dehydrogenase (decarboxylating) activity, glyoxylate reductase (NADP) activity; INVOLVED IN: oxidation reduction, pentose-phosphate shunt, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 1 (TAIR:AT3G25530.1); Has 16115 Blast hits to 16085 proteins in 2099 species: Archae - 147; Bacteria - 9815; Metazoa - 317; Fungi - 434; Plants - 311; Viruses - 1; Other Eukaryotes - 5090 (source: NCBI BLink). & (gnl|cdd|32267 : 205.0) no description available & (chl4|518111 : 202.0) no description available & (gnl|cdd|35630 : 198.0) no description available & (ipr016040 : 83.73703) NAD(P)-binding domain & (reliability: 398.0) & (original description: Oxidoreductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17487 PE=4 SV=1)'" P '7.2.1' 'OPP.non-reductive PP.transketolase' 'tr|b7g5r3|b7g5r3_phatc' "'(ipr005474 : 1500.0) Transketolase, N-terminal & (gnl|cdd|30371 : 888.0) no description available & (loc_os06g04270.1 : 615.0) no description available & (q7sic9|tktc_maize : 612.0) Transketolase, chloroplast (EC 2.2.1.1) (TK) - Zea mays (Maize) & (chl4|518554 : 610.0) no description available & (at2g45290 : 605.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|35743 : 602.0) no description available & (reliability: 1210.0) & (original description: Transketolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_29260 PE=4 SV=1)'" P '7.2.1' 'OPP.non-reductive PP.transketolase' 'tr|b7fuu0|b7fuu0_phatc' "'(gnl|cdd|30371 : 738.0) no description available & (loc_os06g04270.1 : 466.0) no description available & (q43848|tktc_soltu : 457.0) Transketolase, chloroplast precursor (EC 2.2.1.1) (TK) - Solanum tuberosum (Potato) & (chl4|518554 : 452.0) no description available & (at2g45290 : 448.0) Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink). & (gnl|cdd|35743 : 423.0) no description available & (ipr005474 : 245.78882) Transketolase, N-terminal & (reliability: 896.0) & (original description: Transketolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Tkl PE=4 SV=1)'" P '7.2.2' 'OPP.non-reductive PP.transaldolase' 'tr|b5y3s6|b5y3s6_phatc' "'(gnl|cdd|81492 : 512.0) no description available & (gnl|cdd|37983 : 381.0) no description available & (chl4|511284 : 302.0) no description available & (ipr013785 : 291.3636) Aldolase-type TIM barrel & (at1g12230 : 144.0) Aldolase superfamily protein; FUNCTIONS IN: transaldolase activity, zinc ion binding; INVOLVED IN: carbohydrate metabolic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Transaldolase (InterPro:IPR001585). & (loc_os08g05830.1 : 138.0) no description available & (reliability: 288.0) & (original description: Transaldolase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_28222 PE=3 SV=1)'" P '7.2.4' 'OPP.non-reductive PP.ribose 5-phosphate isomerase' 'tr|b5y3n7|b5y3n7_phatc' "'(gnl|cdd|73164 : 268.0) no description available & (chl4|521225 : 255.0) no description available & (gnl|cdd|38285 : 238.0) no description available & (at3g04790 : 233.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (loc_os07g08030.1 : 233.0) no description available & (ipr004788 : 130.2541) Ribose 5-phosphate isomerase, type A & (reliability: 693.9447) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_50995 PE=3 SV=1)'" P '7.3' 'OPP.electron transfer' 'tr|a0t0c8|a0t0c8_phatc' "'(gnl|cdd|79346 : 152.0) no description available & (p00228|fer_wheat : 127.0) Ferredoxin, chloroplast precursor - Triticum aestivum (Wheat) & (chl4|515525 : 125.0) no description available & (at1g60950 : 124.0) encodes a major leaf ferredoxin; FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink). & (loc_os08g01380.1 : 123.0) no description available & (ipr012675 : 77.25827) Beta-grasp domain & (reliability: 224.0) & (original description: Ferredoxin OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=petF PE=3 SV=1)'" P '7.3' 'OPP.electron transfer' 'tr|b7gct8|b7gct8_phatc' "'(at1g30510 : 424.0) Encodes a root-type ferredoxin:NADP(H) oxidoreductase.; root FNR 2 (RFNR2); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Ferredoxin--NADP reductase (InterPro:IPR012146), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: root FNR 1 (TAIR:AT4G05390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o23877|fenr3_orysa : 424.0) Ferredoxin--NADP reductase, embryo isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) - Oryza sativa (Rice) & (loc_os07g05400.1 : 424.0) no description available & (chl4|512341 : 410.0) no description available & (gnl|cdd|36373 : 217.0) no description available & (gnl|cdd|30718 : 182.0) no description available & (ipr001433 : 52.42883) Oxidoreductase FAD/NAD(P)-binding & (reliability: 848.0) & (original description: Ferredoxin--NADP reductase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_23717 PE=3 SV=1)'" P '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'tr|b7gab0|b7gab0_phatc' "'(gnl|cdd|35446 : 463.0) no description available & (loc_os02g50620.1 : 372.0) no description available & (chl4|524721 : 369.0) no description available & (at1g59900 : 365.0) encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC); pyruvate dehydrogenase complex E1 alpha subunit (E1 ALPHA); FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: Thiamin diphosphate-binding fold (THDP-binding) superfamily protein (TAIR:AT1G24180.1); Has 9893 Blast hits to 9890 proteins in 1845 species: Archae - 125; Bacteria - 6023; Metazoa - 522; Fungi - 292; Plants - 213; Viruses - 0; Other Eukaryotes - 2718 (source: NCBI BLink). & (p52903|odpa_soltu : 365.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (gnl|cdd|48163 : 339.0) no description available & (ipr001017 : 224.40057) Dehydrogenase, E1 component & (reliability: 730.0) & (original description: Pyruvate dehydrogenase E1 component subunit alpha OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDHA1 PE=4 SV=1)'" P '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'tr|b7fze1|b7fze1_phatc' "'(gnl|cdd|48163 : 262.0) no description available & (gnl|cdd|35446 : 237.0) no description available & (at1g01090 : 204.0) pyruvate dehydrogenase E1 alpha subunit; pyruvate dehydrogenase E1 alpha (PDH-E1 ALPHA); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity; INVOLVED IN: oxidation reduction, glycolysis, metabolic process; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 10065 Blast hits to 10059 proteins in 1888 species: Archae - 130; Bacteria - 6136; Metazoa - 517; Fungi - 241; Plants - 224; Viruses - 0; Other Eukaryotes - 2817 (source: NCBI BLink). & (loc_os03g44300.1 : 199.0) no description available & (chl4|521374 : 193.0) no description available & (q9mur4|odpb_mesvi : 188.0) Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1) - Mesostigma viride & (ipr001017 : 117.026375) Dehydrogenase, E1 component & (reliability: 408.0) & (original description: Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDH1 PE=4 SV=1)'" P '8.1.1.1' 'TCA / org transformation.TCA.pyruvate DH.E1' 'tr|b7fzn6|b7fzn6_phatc' "'(gnl|cdd|35744 : 504.0) no description available & (gnl|cdd|84022 : 475.0) no description available & (chl4|511939 : 438.0) no description available & (at5g50850 : 435.0) MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink). & (loc_os08g42410.1 : 426.0) no description available & (p52904|odpb_pea : 406.0) Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B) - Pisum sativum (Garden pea) & (ipr015941 : 98.05565) Transketolase-like, C-terminal & (reliability: 870.0) & (original description: Pyruvate dehydrogenase E1 component subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PDHB1 PE=4 SV=1)'" P '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'tr|b7g3i7|b7g3i7_phatc' "'(gnl|cdd|35777 : 375.0) no description available & (gnl|cdd|84002 : 327.0) no description available & (loc_os06g30460.1 : 289.0) no description available & (at3g52200 : 286.0) dihydrolipoamide S-acetyltransferase (LTA3) mRNA, nuclear; LTA3; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT1G54220.2). & (chl4|520357 : 240.0) no description available & (ipr023213 : 172.3574) Chloramphenicol acetyltransferase-like domain & (reliability: 572.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DHLTA_2 PE=3 SV=1)'" P '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'tr|b7fp61|b7fp61_phatc' "'(gnl|cdd|35777 : 345.0) no description available & (loc_os06g01630.1 : 301.0) no description available & (at1g54220 : 297.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (gnl|cdd|84002 : 294.0) no description available & (chl4|520357 : 254.0) no description available & (ipr023213 : 126.45986) Chloramphenicol acetyltransferase-like domain & (reliability: 594.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DHLTA_1 PE=3 SV=1)'" P '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'tr|b7gda9|b7gda9_phatc' "'(gnl|cdd|84002 : 331.0) no description available & (gnl|cdd|35777 : 330.0) no description available & (loc_os12g08170.1 : 324.0) no description available & (at1g34430 : 320.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (chl4|520617 : 289.0) no description available & (ipr023213 : 135.51605) Chloramphenicol acetyltransferase-like domain & (reliability: 640.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DHLTA_3 PE=3 SV=1)'" P '8.1.1.2' 'TCA / org transformation.TCA.pyruvate DH.E2' 'tr|b7s3l5|b7s3l5_phatc' "'(gnl|cdd|35777 : 330.0) no description available & (gnl|cdd|84002 : 329.0) no description available & (loc_os12g08170.1 : 324.0) no description available & (at1g34430 : 319.0) embryo defective 3003 (EMB3003); FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: 2-oxoacid dehydrogenases acyltransferase family protein (TAIR:AT3G25860.1); Has 22237 Blast hits to 19790 proteins in 2346 species: Archae - 125; Bacteria - 13063; Metazoa - 719; Fungi - 466; Plants - 373; Viruses - 0; Other Eukaryotes - 7491 (source: NCBI BLink). & (chl4|520617 : 288.0) no description available & (ipr001078 : 135.51605) 2-oxoacid dehydrogenase acyltransferase, catalytic domain & (reliability: 638.0) & (original description: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1828 PE=3 SV=1)'" P '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'tr|b7fvm3|b7fvm3_phatc' "'(gnl|cdd|36549 : 625.0) no description available & (gnl|cdd|81930 : 566.0) no description available & (at1g48030 : 513.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 500.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (loc_os05g06750.1 : 498.0) no description available & (chl4|521755 : 485.0) no description available & (ipr004099 : 118.81813) Pyridine nucleotide-disulphide oxidoreductase, dimerisation & (reliability: 1026.0) & (original description: Dihydrolipoyl dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=DLDH PE=3 SV=1)'" P '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'tr|b7g9g3|b7g9g3_phatc' "'(loc_os05g06460.1 : 536.0) no description available & (at3g16950 : 526.0) encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.; lipoamide dehydrogenase 1 (LPD1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: dihydrolipoyl dehydrogenases (TAIR:AT4G16155.1); Has 30222 Blast hits to 30191 proteins in 3051 species: Archae - 599; Bacteria - 20783; Metazoa - 811; Fungi - 386; Plants - 503; Viruses - 0; Other Eukaryotes - 7140 (source: NCBI BLink). & (gnl|cdd|81943 : 501.0) no description available & (chl4|510944 : 422.0) no description available & (gnl|cdd|36549 : 420.0) no description available & (p31023|dldh_pea : 206.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (ipr004099 : 95.04087) Pyridine nucleotide-disulphide oxidoreductase, dimerisation & (reliability: 1052.0) & (original description: Lipoamide dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=pDLDH1 PE=3 SV=1)'" P '8.1.1.3' 'TCA / org transformation.TCA.pyruvate DH.E3' 'tr|b7fxv5|b7fxv5_phatc' "'(gnl|cdd|81939 : 308.0) no description available & (gnl|cdd|36549 : 170.0) no description available & (chl4|521755 : 137.0) no description available & (at1g48030 : 135.0) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.; lipoamide dehydrogenase 1 (LPD1); FUNCTIONS IN: dihydrolipoyl dehydrogenase activity, copper ion binding, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to light stimulus; LOCATED IN: mitochondrion, apoplast, mitochondrial respiratory chain complex I, mitochondrial matrix; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, class I, active site (InterPro:IPR012999), Pyridine nucleotide-disulphide oxidoreductase, dimerisation (InterPro:IPR004099), Dihydrolipoamide dehydrogenase (InterPro:IPR006258), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Mercuric reductase (InterPro:IPR000815), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: lipoamide dehydrogenase 2 (TAIR:AT3G17240.3); Has 41519 Blast hits to 41478 proteins in 3269 species: Archae - 1065; Bacteria - 30177; Metazoa - 918; Fungi - 552; Plants - 652; Viruses - 0; Other Eukaryotes - 8155 (source: NCBI BLink). & (p31023|dldh_pea : 130.0) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Pyruvate dehydrogenase complex E3 subunit) (PDC-E3) (E3) (Glycine cleavage system L protein) - Pisum sativum (Garden pea) & (loc_os05g06750.1 : 129.0) no description available & (ipr004099 : 76.47961) Pyridine nucleotide-disulphide oxidoreductase, dimerisation & (reliability: 270.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_19949 PE=4 SV=1)'" P '8.1.2' 'TCA / org transformation.TCA.CS' 'tr|b7g9p5|b7g9p5_phatc' "'(gnl|cdd|37828 : 520.0) no description available & (o80433|cisy_dauca : 515.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (loc_os02g10070.2 : 514.0) no description available & (at2g44350 : 504.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (gnl|cdd|77261 : 494.0) no description available & (chl4|513161 : 483.0) no description available & (ipr016142 : 255.40462) Citrate synthase-like, large alpha subdomain & (reliability: 1008.0) & (original description: Citrate synthase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_30145 PE=3 SV=1)'" P '8.1.3' 'TCA / org transformation.TCA.aconitase' 'tr|b7fpz8|b7fpz8_phatc' "'(ipr001030 : 1500.0) Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha & (gnl|cdd|81620 : 812.0) no description available & (gnl|cdd|35675 : 414.0) no description available & (at4g13430 : 143.0) Encodes methylthioalkylmalate isomerase.; isopropyl malate isomerase large subunit 1 (IIL1); FUNCTIONS IN: lyase activity, intramolecular transferase activity, transferring hydroxy groups; INVOLVED IN: glucosinolate biosynthetic process, response to cadmium ion, metabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha (InterPro:IPR001030), Homoaconitase/3-isopropylmalate dehydratase, small/large subunit (InterPro:IPR015936), Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup (InterPro:IPR006251), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 (InterPro:IPR015932), Aconitase-like core (InterPro:IPR015937), Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 (InterPro:IPR015931); BEST Arabidopsis thaliana protein match is: aconitase 2 (TAIR:AT4G26970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g03260.2 : 119.0) no description available & (chl4|510692 : 118.0) no description available & (p49608|acoc_cucma : 74.7) Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 2798.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_24772 PE=3 SV=1)'" P '8.1.4' 'TCA / org transformation.TCA.IDH' 'tr|b7g620|b7g620_phatc' "'(gnl|cdd|82596 : 207.0) no description available & (gnl|cdd|36739 : 199.0) no description available & (chl4|521939 : 166.0) no description available & (at5g14590 : 162.0) Isocitrate/isopropylmalate dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, isocitrate dehydrogenase (NADP+) activity, magnesium ion binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction, isocitrate metabolic process, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: cytosolic NADP+-dependent isocitrate dehydrogenase (TAIR:AT1G65930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p50218|idhc_tobac : 155.0) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) - Nicotiana tabacum (Common tobacco) & (loc_os05g49760.1 : 147.0) no description available & (ipr001804 : 140.36238) Isocitrate and isopropylmalate dehydrogenases family & (reliability: 324.0) & (original description: Isocitrate dehydrogenase (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14762 PE=4 SV=1)'" P '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'tr|b7g4t8|b7g4t8_phatc' "'(gnl|cdd|35671 : 1184.0) no description available & (gnl|cdd|82973 : 1136.0) no description available & (at5g65750 : 1009.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os07g49520.1 : 998.0) no description available & (chl4|513631 : 989.0) no description available & (ipr005475 : 136.87418) Transketolase-like, pyrimidine-binding domain & (p52902|odpa_pea : 38.9) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Pisum sativum (Garden pea) & (reliability: 2018.0) & (original description: 2-oxoglutarate dehydrogenase E1 component OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=OGD1 PE=4 SV=1)'" P '8.1.5' 'TCA / org transformation.TCA.2-oxoglutarate dehydrogenase' 'tr|b7gbe7|b7gbe7_phatc' "'(gnl|cdd|81709 : 434.0) no description available & (gnl|cdd|35779 : 429.0) no description available & (chl4|524848 : 299.0) no description available & (at5g55070 : 296.0) Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (loc_os04g32330.1 : 296.0) no description available & (ipr023213 : 190.37262) Chloramphenicol acetyltransferase-like domain & (reliability: 592.0) & (original description: Dihydrolipoamide succinyltransferase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_40430 PE=4 SV=1)'" P '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'tr|b7g0k7|b7g0k7_phatc' "'(gnl|cdd|36469 : 480.0) no description available & (gnl|cdd|81688 : 459.0) no description available & (at5g08300 : 364.0) Succinyl-CoA ligase, alpha subunit; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, metal ion binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), CoA-binding (InterPro:IPR003781), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: Succinyl-CoA ligase, alpha subunit (TAIR:AT5G23250.1); Has 9706 Blast hits to 9705 proteins in 2093 species: Archae - 338; Bacteria - 4848; Metazoa - 444; Fungi - 287; Plants - 143; Viruses - 0; Other Eukaryotes - 3646 (source: NCBI BLink). & (chl4|521366 : 364.0) no description available & (q6zl94|suca_orysa : 346.0) Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS-alpha) - Oryza sativa (Rice) & (loc_os07g38970.1 : 346.0) no description available & (ipr016102 : 180.8056) Succinyl-CoA synthetase-like & (reliability: 728.0) & (original description: Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SCS-alpha PE=3 SV=1)'" P '8.1.6' 'TCA / org transformation.TCA.succinyl-CoA ligase' 'tr|b7fxa2|b7fxa2_phatc' "'(gnl|cdd|38010 : 465.0) no description available & (gnl|cdd|80721 : 434.0) no description available & (q6k9n6|sucb_orysa : 381.0) Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) - Oryza sativa (Rice) & (loc_os02g40830.1 : 381.0) no description available & (at2g20420 : 380.0) ATP citrate lyase (ACL) family protein; FUNCTIONS IN: succinate-CoA ligase (GDP-forming) activity, copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit (InterPro:IPR005809), Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase A-1 (TAIR:AT1G10670.4); Has 9337 Blast hits to 9333 proteins in 2108 species: Archae - 181; Bacteria - 4147; Metazoa - 466; Fungi - 228; Plants - 81; Viruses - 0; Other Eukaryotes - 4234 (source: NCBI BLink). & (chl4|517153 : 353.0) no description available & (ipr016102 : 150.63562) Succinyl-CoA synthetase-like & (reliability: 760.0) & (original description: Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26921 PE=3 SV=1)'" P '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'tr|b7ga40|b7ga40_phatc' "'(gnl|cdd|38259 : 409.0) no description available & (gnl|cdd|81798 : 377.0) no description available & (at3g27380 : 338.0) One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.; succinate dehydrogenase 2-1 (SDH2-1); CONTAINS InterPro DOMAIN/s: Ferredoxin (InterPro:IPR001041), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), Fumarate reductase, C-terminal (InterPro:IPR012285), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), Alpha-helical ferredoxin (InterPro:IPR009051), Succinate dehydrogenase/fumarate reductase iron-sulphur protein (InterPro:IPR004489); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 2-2 (TAIR:AT5G40650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (chl4|523130 : 327.0) no description available & (loc_os08g02640.4 : 311.0) no description available & (ipr012285 : 116.43859) Fumarate reductase, C-terminal & (reliability: 676.0) & (original description: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SDH2 PE=3 SV=1)'" P '8.1.7' 'TCA / org transformation.TCA.succinate dehydrogenase' 'tr|b5y5n6|b5y5n6_phatc' "'(gnl|cdd|82801 : 1022.0) no description available & (gnl|cdd|37614 : 916.0) no description available & (at5g66760 : 864.0) One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.; succinate dehydrogenase 1-1 (SDH1-1); FUNCTIONS IN: cobalt ion binding, succinate dehydrogenase activity, ATP binding; INVOLVED IN: mitochondrial electron transport, succinate to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex II, mitochondrion, cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Succinate dehydrogenase, flavoprotein subunit (InterPro:IPR011281), Fumarate reductase/succinate dehydrogenase, FAD-binding site (InterPro:IPR003952), Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal (InterPro:IPR015939), Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal (InterPro:IPR003953), Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (InterPro:IPR014006), Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal (InterPro:IPR004112); BEST Arabidopsis thaliana protein match is: succinate dehydrogenase 1-2 (TAIR:AT2G18450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6zdy8|dhsa_orysa : 861.0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) - Oryza sativa (Rice) & (loc_os07g04240.1 : 861.0) no description available & (chl4|515363 : 609.0) no description available & (ipr003953 : 267.00455) FAD binding domain & (reliability: 1728.0) & (original description: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SDH1 PE=3 SV=1)'" P '8.1.8' 'TCA / org transformation.TCA.fumarase' 'tr|b7g0h8|b7g0h8_phatc' "'(gnl|cdd|80687 : 756.0) no description available & (gnl|cdd|36531 : 692.0) no description available & (at5g50950 : 546.0) Encodes a fumarase enzyme initially shown to be in the mitochondria through proteomic studies but later shown to be present in the cytosol using an RFP fluorescent protein tag. It appears to be important for the accumulation of fumarate from malate in leaves in the light, and helps to promote nitrogen assimilation under high nitrogen conditions. It does not appear to be necessary for lipid metabolism and seedling growth.; FUMARASE 2 (FUM2); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: nitrate assimilation, response to salt stress, fumarate metabolic process; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: male gametophyte, guard cell, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: fumarase 1 (TAIR:AT2G47510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os03g21950.1 : 513.0) no description available & (ipr022761 : 236.47311) Lyase 1, N-terminal & (chl4|514232 : 39.3) no description available & (p22675|arly_chlre : 38.5) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 1092.0) & (original description: Fumarate hydratase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=Fum PE=3 SV=1)'" P '8.1.8' 'TCA / org transformation.TCA.fumarase' 'tr|b7fs29|b7fs29_phatc' "'(gnl|cdd|28782 : 695.0) no description available & (gnl|cdd|37911 : 495.0) no description available & (at2g47510 : 42.4) Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.; fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: response to oxidative stress, response to salt stress, pollen tube development; LOCATED IN: mitochondrion; EXPRESSED IN: cotyledon, male gametophyte, guard cell, root; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: FUMARASE 2 (TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins in 2822 species: Archae - 389; Bacteria - 12991; Metazoa - 306; Fungi - 295; Plants - 106; Viruses - 0; Other Eukaryotes - 5649 (source: NCBI BLink). & (ipr022761 : 42.026352) Lyase 1, N-terminal & (loc_os03g21950.1 : 38.5) no description available & (reliability: 84.8) & (original description: Adenylosuccinate lyase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18087 PE=3 SV=1)'" P '8.1.9' 'TCA / org transformation.TCA.malate DH' 'tr|b7geg9|b7geg9_phatc' "'(gnl|cdd|58492 : 443.0) no description available & (gnl|cdd|36707 : 429.0) no description available & (p83373|mdhm_fraan : 347.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (chl4|512496 : 338.0) no description available & (at3g15020 : 337.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (loc_os01g46070.1 : 335.0) no description available & (ipr015955 : 135.44705) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal & (reliability: 674.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=MDH PE=3 SV=1)'" P '8.2.10' 'TCA / org transformation.other organic acid transformatons.malic' 'tr|b7fzd7|b7fzd7_phatc' "'(gnl|cdd|36471 : 702.0) no description available & (loc_os01g54030.1 : 516.0) no description available & (p43279|maoc_orysa : 509.0) NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME) - Oryza sativa (Rice) & (at5g25880 : 506.0) The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.; NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|515589 : 398.0) no description available & (gnl|cdd|30629 : 322.0) no description available & (ipr016040 : 236.98395) NAD(P)-binding domain & (reliability: 1012.0) & (original description: Malic enzyme OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_51970 PE=3 SV=1)'" P '8.2.9' 'TCA / org transformation.other organic acid transformatons.cyt MDH' 'tr|b7geg9|b7geg9_phatc' "'(gnl|cdd|58492 : 443.0) no description available & (gnl|cdd|36707 : 429.0) no description available & (p83373|mdhm_fraan : 347.0) Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37) - Fragaria ananassa (Strawberry) & (chl4|512496 : 338.0) no description available & (at3g15020 : 337.0) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: malate dehydrogenase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, apoplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria (InterPro:IPR010097), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT1G53240.1); Has 16805 Blast hits to 16803 proteins in 5273 species: Archae - 237; Bacteria - 11900; Metazoa - 1175; Fungi - 513; Plants - 469; Viruses - 0; Other Eukaryotes - 2511 (source: NCBI BLink). & (loc_os01g46070.1 : 335.0) no description available & (ipr015955 : 135.44705) Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal & (reliability: 618.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=MDH PE=3 SV=1)'" P '8.2.99' 'TCA / org transformation.other organic acid transformatons.misc' 'tr|b7fnt8|b7fnt8_phatc' "'(ipr015590 : 1500.0) Aldehyde dehydrogenase domain & (gnl|cdd|84580 : 433.0) no description available & (gnl|cdd|37661 : 317.0) no description available & (at1g74920 : 270.0) Arabidopsis thaliana similar to betaine aldehyde dehydrogenase; aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1). & (p17202|badh_spiol : 263.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (loc_os08g32870.1 : 254.0) no description available & (chl4|525683 : 222.0) no description available & (reliability: 514.0) & (original description: Succinate semialdehyde dehydrogenase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=SSDH PE=3 SV=1)'" P '8.3' 'TCA / org transformation.carbonic anhydrases' 'tr|b7fnu0|b7fnu0_phatc' "'(gnl|cdd|48222 : 244.0) no description available & (ipr001765 : 137.27963) Carbonic anhydrase & (chl4|515107 : 125.0) no description available & (gnl|cdd|36791 : 101.0) no description available & (at1g58180 : 79.3) beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1). & (loc_os01g45274.3 : 79.0) no description available & (p40880|cahc_horvu : 77.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Hordeum vulgare (Barley) & (reliability: 398.83936) & (original description: Carbonic anhydrase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42406 PE=3 SV=1)'" P '8.3' 'TCA / org transformation.carbonic anhydrases' 'tr|b7fnt2|b7fnt2_phatc' "'(gnl|cdd|73193 : 51.9) no description available & (gnl|cdd|35603 : 49.2) no description available & (ipr001148 : 41.775036) Carbonic anhydrase, alpha-class, catalytic domain & (loc_os04g33660.2 : 37.7) no description available & (reliability: 73.106316) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42574 PE=4 SV=1)'" P '8.3' 'TCA / org transformation.carbonic anhydrases' 'tr|b7fue7|b7fue7_phatc' "'(ipr001148 : 47.32467) Carbonic anhydrase, alpha-class, catalytic domain & (gnl|cdd|28765 : 47.2) no description available & (gnl|cdd|35603 : 45.0) no description available & (loc_os08g32780.1 : 38.9) no description available & (at4g32200 : 37.4) meiotic asynaptic mutant 2, homologue of ASY1; ASY2; FUNCTIONS IN: DNA binding; INVOLVED IN: synaptonemal complex assembly; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT1G67370.1); Has 963 Blast hits to 893 proteins in 304 species: Archae - 15; Bacteria - 206; Metazoa - 200; Fungi - 133; Plants - 165; Viruses - 16; Other Eukaryotes - 228 (source: NCBI BLink). & (reliability: 152.81818) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44526 PE=4 SV=1)'" P '8.3' 'TCA / org transformation.carbonic anhydrases' 'tr|b7fxp8|b7fxp8_phatc' "'(gnl|cdd|48222 : 233.0) no description available & (chl4|515108 : 135.0) no description available & (ipr001765 : 130.29184) Carbonic anhydrase & (gnl|cdd|36791 : 94.7) no description available & (p40880|cahc_horvu : 83.2) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Hordeum vulgare (Barley) & (loc_os01g45274.3 : 82.4) no description available & (at1g58180 : 79.0) beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1). & (reliability: 386.0107) & (original description: Carbonic anhydrase OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_45443 PE=3 SV=1)'" P '8.3' 'TCA / org transformation.carbonic anhydrases' 'tr|b7fue9|b7fue9_phatc' "'(ipr001148 : 54.731415) Carbonic anhydrase, alpha-class, catalytic domain & (gnl|cdd|28766 : 51.5) no description available & (gnl|cdd|35603 : 48.5) no description available & (loc_os08g32750.1 : 43.9) no description available & (at4g20990 : 36.6) alpha carbonic anhydrase 4 (ACA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: one-carbon metabolic process; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, alpha-class, conserved site (InterPro:IPR018338), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 6 (TAIR:AT4G21000.1); Has 3359 Blast hits to 3345 proteins in 546 species: Archae - 0; Bacteria - 694; Metazoa - 2070; Fungi - 83; Plants - 327; Viruses - 4; Other Eukaryotes - 181 (source: NCBI BLink). & (chl4|526413 : 36.6) no description available & (reliability: 168.97998) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_54251 PE=4 SV=1)'" P '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'tr|b7g0j8|b7g0j8_phatc' "'(gnl|cdd|38300 : 333.0) no description available & (chl4|518721 : 280.0) no description available & (gnl|cdd|48213 : 273.0) no description available & (loc_os03g62490.1 : 265.0) no description available & (at1g03860 : 247.0) prohibitin 2; prohibitin 2 (PHB2); INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 7 (TAIR:AT5G44140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (ipr001107 : 44.690723) Band 7 protein & (reliability: 494.0) & (original description: Prohibitin-like protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12799 PE=4 SV=1)'" P '9.1.1' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I' 'tr|b7s480|b7s480_phatc' "'(gnl|cdd|38636 : 55.7) no description available & (chl4|514014 : 42.0) no description available & (at3g12260 : 38.9) LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 252 Blast hits to 252 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 50; Plants - 50; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 77.8) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1704 PE=3 SV=1)'" P '9.1.1.5' 'mitochondrial electron transport / ATP synthesis.NADH-DH.complex I.carbonic anhydrase' 'tr|b7fy50|b7fy50_phatc' "'(at1g47260 : 166.0) Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.; gamma carbonic anhydrase 2 (GAMMA CA2); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: response to salt stress, regulation of oxygen and reactive oxygen species metabolic process, anther dehiscence, photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 1 (TAIR:AT1G19580.1); Has 12062 Blast hits to 12006 proteins in 2273 species: Archae - 302; Bacteria - 8576; Metazoa - 53; Fungi - 108; Plants - 233; Viruses - 0; Other Eukaryotes - 2790 (source: NCBI BLink). & (loc_os12g07220.1 : 160.0) no description available & (chl4|526416 : 159.0) no description available & (gnl|cdd|31007 : 151.0) no description available & (gnl|cdd|36674 : 52.2) no description available & (reliability: 332.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35304 PE=4 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b5y4v1|b5y4v1_phatc' "'(gnl|cdd|37869 : 674.0) no description available & (gnl|cdd|32078 : 617.0) no description available & (at5g08530 : 610.0) 51 kDa subunit of complex I (CI51); FUNCTIONS IN: 4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site (InterPro:IPR001949), NADH:ubiquinone oxidoreductase, 51kDa subunit (InterPro:IPR011538), NADH ubiquinone oxidoreductase, F subunit (InterPro:IPR011537), Soluble ligand binding domain (InterPro:IPR019554), NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding (InterPro:IPR019575); Has 8894 Blast hits to 8884 proteins in 1703 species: Archae - 49; Bacteria - 4484; Metazoa - 213; Fungi - 125; Plants - 97; Viruses - 0; Other Eukaryotes - 3926 (source: NCBI BLink). & (loc_os07g45090.1 : 608.0) no description available & (chl4|509670 : 603.0) no description available & (ipr011538 : 104.12715) NADH:ubiquinone oxidoreductase, 51kDa subunit & (reliability: 1220.0) & (original description: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_43944 PE=3 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7g4h7|b7g4h7_phatc' "'(at1g16700 : 267.0) Alpha-helical ferredoxin; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, respiratory chain complex I; CONTAINS InterPro DOMAIN/s: 4Fe-4S binding domain (InterPro:IPR001450), NADH-quinone oxidoreductase, chain I (InterPro:IPR010226), 4Fe-4S ferredoxin, iron-sulphur binding, conserved site (InterPro:IPR017900), 4Fe-4S ferredoxin, iron-sulpur binding domain (InterPro:IPR017896), Alpha-helical ferredoxin (InterPro:IPR009051); BEST Arabidopsis thaliana protein match is: Alpha-helical ferredoxin (TAIR:AT1G79010.1); Has 11610 Blast hits to 10987 proteins in 2441 species: Archae - 1438; Bacteria - 7070; Metazoa - 154; Fungi - 106; Plants - 790; Viruses - 1; Other Eukaryotes - 2051 (source: NCBI BLink). & (p80269|ndus8_soltu : 261.0) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 23 kDa subunit) (Complex I-23kD) (CI-23kD) (Complex I-28.5kD) (CI-28.5kD) - Solanum tuberosum (Po & (loc_os03g56300.1 : 259.0) no description available & (gnl|cdd|38466 : 252.0) no description available & (chl4|512775 : 251.0) no description available & (gnl|cdd|81787 : 217.0) no description available & (ipr012285 : 55.378574) Fumarate reductase, C-terminal & (reliability: 534.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_14260 PE=3 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7fq48|b7fq48_phatc' "'(gnl|cdd|38076 : 245.0) no description available & (loc_os02g57180.1 : 162.0) no description available & (at2g20360 : 143.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion, respiratory chain complex I, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 5254 Blast hits to 5252 proteins in 1137 species: Archae - 81; Bacteria - 3082; Metazoa - 148; Fungi - 134; Plants - 101; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink). & (chl4|509914 : 114.0) no description available & (gnl|cdd|30800 : 75.4) no description available & (ipr016040 : 63.08609) NAD(P)-binding domain & (reliability: 286.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17671 PE=4 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7fvx2|b7fvx2_phatc' "'(gnl|cdd|68638 : 68.9) no description available & (gnl|cdd|38592 : 66.6) no description available & (loc_os10g42840.2 : 66.2) no description available & (chl4|520055 : 58.2) no description available & (at3g03100 : 57.8) NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 115.6) & (original description: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_34392 PE=3 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7ges5|b7ges5_phatc' "'(gnl|cdd|36900 : 285.0) no description available & (gnl|cdd|81942 : 282.0) no description available & (at5g11770 : 225.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity, zinc ion binding; INVOLVED IN: oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrion, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase-like, 20kDa subunit (InterPro:IPR006137), [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB (InterPro:IPR014406), NADH:ubiquinone oxidoreductase, 20kDa subunit (InterPro:IPR006138); BEST Arabidopsis thaliana protein match is: photosystem II reaction center protein G (TAIR:ATCG00430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43844|ndus7_soltu : 224.0) NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20kD) (CI-20kD) - Solanum tuberosum (Potato) & (loc_os01g52214.1 : 223.0) no description available & (chl4|512679 : 207.0) no description available & (ipr006137 : 47.56583) NADH:ubiquinone oxidoreductase-like, 20kDa subunit & (reliability: 450.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_41645 PE=3 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7fum1|b7fum1_phatc' "'(gnl|cdd|38656 : 51.9) no description available & (loc_os04g24520.1 : 50.4) no description available & (at5g47890 : 49.7) NADH-ubiquinone oxidoreductase B8 subunit, putative; CONTAINS InterPro DOMAIN/s: Ribosomal protein/NADH dehydrogenase domain (InterPro:IPR007741), NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|516651 : 44.3) no description available & (reliability: 99.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44596 PE=4 SV=1)'" P '9.1.2' 'mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear' 'tr|b7g8a8|b7g8a8_phatc' "'(gnl|cdd|38599 : 60.5) no description available & (gnl|cdd|68375 : 60.4) no description available & (loc_os07g39710.1 : 53.9) no description available & (at5g67590 : 52.8) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|516697 : 52.4) no description available & (reliability: 105.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_48767 PE=4 SV=1)'" P '9.2.1.4' 'mitochondrial electron transport / ATP synthesis.NADH-DH.type II.internal matrix' 'tr|b7fxg3|b7fxg3_phatc' "'(gnl|cdd|37706 : 417.0) no description available & (gnl|cdd|31444 : 287.0) no description available & (at2g29990 : 275.0) alternative NAD(P)H dehydrogenase 2 (NDA2); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 1 (TAIR:AT1G07180.1); Has 11797 Blast hits to 11597 proteins in 2273 species: Archae - 301; Bacteria - 9312; Metazoa - 49; Fungi - 695; Plants - 411; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink). & (loc_os01g61410.1 : 275.0) no description available & (chl4|522389 : 273.0) no description available & (ipr013027 : 51.706696) FAD-dependent pyridine nucleotide-disulphide oxidoreductase & (reliability: 550.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26970 PE=4 SV=1)'" P '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'tr|b7fz93|b7fz93_phatc' "'(gnl|cdd|39157 : 292.0) no description available & (gnl|cdd|32208 : 247.0) no description available & (at1g50940 : 210.0) Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness.; electron transfer flavoprotein alpha (ETFALPHA); FUNCTIONS IN: copper ion binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein, alpha subunit, C-terminal (InterPro:IPR014731), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730), Electron transfer flavoprotein, alpha subunit (InterPro:IPR001308), Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site (InterPro:IPR018206); Has 7540 Blast hits to 7533 proteins in 1658 species: Archae - 158; Bacteria - 4517; Metazoa - 162; Fungi - 143; Plants - 45; Viruses - 0; Other Eukaryotes - 2515 (source: NCBI BLink). & (loc_os03g61920.1 : 195.0) no description available & (chl4|516833 : 181.0) no description available & (ipr014731 : 71.977974) Electron transfer flavoprotein, alpha subunit, C-terminal & (reliability: 420.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12373 PE=4 SV=1)'" P '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'tr|b7fqs4|b7fqs4_phatc' "'(gnl|cdd|38390 : 300.0) no description available & (at5g43430 : 263.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (loc_os04g10400.1 : 255.0) no description available & (gnl|cdd|32269 : 249.0) no description available & (ipr014729 : 230.07619) Rossmann-like alpha/beta/alpha sandwich fold & (chl4|520305 : 214.0) no description available & (reliability: 526.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_17860 PE=4 SV=1)'" P '9.3' 'mitochondrial electron transport / ATP synthesis.electron transfer flavoprotein' 'tr|b7g8c3|b7g8c3_phatc' "'(gnl|cdd|37626 : 730.0) no description available & (at2g43400 : 530.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (loc_os10g37210.1 : 511.0) no description available & (chl4|518858 : 490.0) no description available & (gnl|cdd|30989 : 225.0) no description available & (ipr007859 : 76.286415) Electron transfer flavoprotein-ubiquinone oxidoreductase & (reliability: 1193.5012) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_42245 PE=4 SV=1)'" P '9.4' 'mitochondrial electron transport / ATP synthesis.alternative oxidase' 'tr|b7s423|b7s423_phatc' "'(gnl|cdd|85678 : 212.0) no description available & (chl4|520846 : 189.0) no description available & (at3g27620 : 173.0) encodes an isoform of alternate oxidase. expressed in all tissues examined and expression is not induced by antimycin A, an inhibitor of complex III in the mitochondrial respiratory chain.; alternative oxidase 1C (AOX1C); CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1B (TAIR:AT3G22360.1); Has 1310 Blast hits to 1304 proteins in 245 species: Archae - 0; Bacteria - 111; Metazoa - 12; Fungi - 192; Plants - 384; Viruses - 0; Other Eukaryotes - 611 (source: NCBI BLink). & (loc_os04g51150.1 : 167.0) no description available & (q40578|aox2_tobac : 161.0) Alternative oxidase 2, mitochondrial precursor (EC 1.-.-.-) - Nicotiana tabacum (Common tobacco) & (ipr002680 : 140.12122) Alternative oxidase & (reliability: 346.0) & (original description: Predicted protein (Fragment) OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd176 PE=4 SV=1)'" P '9.5' 'mitochondrial electron transport / ATP synthesis.cytochrome c reductase' 'tr|b7fyb7|b7fyb7_phatc' "'(p51134|ucri4_tobac : 237.0) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein 4) (RISP4) - Nicotiana tabacum (Common tobacco) & (loc_os02g32120.1 : 234.0) no description available & (at5g13440 : 230.0) Ubiquinol-cytochrome C reductase iron-sulfur subunit; FUNCTIONS IN: metal ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion, mitochondrial respiratory chain complex III; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome c reductase, iron-sulphur subunit (InterPro:IPR006317), Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Rieske iron-sulphur protein (InterPro:IPR014349), Ubiquinol cytochrome reductase, transmembrane domain (InterPro:IPR004192); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (gnl|cdd|36884 : 215.0) no description available & (chl4|511695 : 214.0) no description available & (gnl|cdd|58540 : 203.0) no description available & (ipr017941 : 98.31801) Rieske [2Fe-2S] iron-sulphur domain & (reliability: 460.0) & (original description: Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_12233 PE=4 SV=1)'" P '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'tr|b5y3c2|b5y3c2_phatc' "'(p00073|cyc_spiol : 141.0) Cytochrome c - Spinacia oleracea (Spinach) & (gnl|cdd|38663 : 141.0) no description available & (at4g10040 : 137.0) Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.; cytochrome c-2 (CYTC-2); CONTAINS InterPro DOMAIN/s: Cytochrome c, class IA/ IB (InterPro:IPR002327), Cytochrome c, class I (InterPro:IPR003088), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: CYTOCHROME C-1 (TAIR:AT1G22840.1); Has 4050 Blast hits to 4028 proteins in 748 species: Archae - 0; Bacteria - 1493; Metazoa - 643; Fungi - 252; Plants - 160; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). & (gnl|cdd|33277 : 137.0) no description available & (loc_os05g34770.1 : 133.0) no description available & (chl4|513318 : 131.0) no description available & (ipr009056 : 99.20961) Cytochrome c domain & (reliability: 274.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATR_20948 PE=3 SV=1)'" P '9.6' 'mitochondrial electron transport / ATP synthesis.cytochrome c' 'tr|b7fvx0|b7fvx0_phatc' "'(gnl|cdd|38262 : 342.0) no description available & (gnl|cdd|65908 : 296.0) no description available & (p25076|cy11_soltu : 283.0) Cytochrome c1, heme protein, mitochondrial precursor (Clone PC13III) - Solanum tuberosum (Potato) & (loc_os05g23620.3 : 273.0) no description available & (at5g40810 : 268.0) Cytochrome C1 family; FUNCTIONS IN: electron carrier activity, iron ion binding, heme binding, electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity; LOCATED IN: mitochondrion, mitochondrial respiratory chain, mitochondrial respiratory chain complex III; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c1 (InterPro:IPR002326), Cytochrome c1, transmembrane anchor, C-terminal (InterPro:IPR021157), Cytochrome c domain (InterPro:IPR009056); BEST Arabidopsis thaliana protein match is: Cytochrome C1 family (TAIR:AT3G27240.1); Has 3544 Blast hits to 3544 proteins in 780 species: Archae - 0; Bacteria - 1175; Metazoa - 215; Fungi - 208; Plants - 106; Viruses - 0; Other Eukaryotes - 1840 (source: NCBI BLink). & (chl4|515778 : 259.0) no description available & (ipr009056 : 175.31117) Cytochrome c domain & (reliability: 536.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_26515 PE=4 SV=1)'" P '9.7' 'mitochondrial electron transport / ATP synthesis.cytochrome c oxidase' 'tr|b7s471|b7s471_phatc' '(gnl|cdd|36776 : 73.4) no description available & (gnl|cdd|33155 : 70.3) no description available & (ipr002994 : 67.16063) Surfeit locus 1 & (loc_os03g10360.1 : 52.8) no description available & (chl4|516338 : 49.7) no description available & (at3g17910 : 49.3) Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly.; SURFEIT 1 (SURF1); CONTAINS InterPro DOMAIN/s: Surfeit locus 1 (InterPro:IPR002994); BEST Arabidopsis thaliana protein match is: Surfeit locus 1 cytochrome c oxidase biogenesis protein (TAIR:AT1G48510.1); Has 1714 Blast hits to 1712 proteins in 488 species: Archae - 0; Bacteria - 777; Metazoa - 126; Fungi - 127; Plants - 43; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink). & (reliability: 98.6) & (original description: SURF1-like protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_bd1384 PE=3 SV=1)' P '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'tr|b7fzy8|b7fzy8_phatc' "'(gnl|cdd|35972 : 212.0) no description available & (at4g03115 : 144.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1); Has 24483 Blast hits to 13698 proteins in 441 species: Archae - 0; Bacteria - 0; Metazoa - 9864; Fungi - 7121; Plants - 4898; Viruses - 3; Other Eukaryotes - 2597 (source: NCBI BLink). & (loc_os11g48040.1 : 140.0) no description available & (chl4|523444 : 132.0) no description available & (gnl|cdd|84566 : 74.5) no description available & (p27080|adt_chlre : 70.1) ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) - Chlamydomonas reinhardtii & (ipr018108 : 37.47624) Mitochondrial substrate/solute carrier & (reliability: 276.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_35949 PE=3 SV=1)'" P '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'tr|b7g539|b7g539_phatc' "'(chl4|510956 : 147.0) no description available & (gnl|cdd|35977 : 78.0) no description available & (loc_os01g16040.1 : 53.1) no description available & (at5g09470 : 47.8) Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).; dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink). & (gnl|cdd|84566 : 44.1) no description available & (reliability: 88.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_47843 PE=3 SV=1)'" P '9.8' 'mitochondrial electron transport / ATP synthesis.uncoupling protein' 'tr|b7gbt9|b7gbt9_phatc' "'(gnl|cdd|35978 : 172.0) no description available & (at1g14140 : 134.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink). & (loc_os04g37630.1 : 125.0) no description available & (chl4|523444 : 115.0) no description available & (gnl|cdd|84566 : 62.6) no description available & (p29518|bt1_maize : 62.4) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 256.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_49764 PE=3 SV=1)'" P '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'tr|b7fs46|b7fs46_phatc' "'(gnl|cdd|82909 : 837.0) no description available & (gnl|cdd|36564 : 781.0) no description available & (p38482|atpbm_chlre : 664.0) ATP synthase subunit beta, mitochondrial precursor (EC 3.6.3.14) - Chlamydomonas reinhardtii & (chl4|517045 : 664.0) no description available & (loc_os05g47980.1 : 652.0) no description available & (at5g08690 : 635.0) Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.; ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, poly(U) RNA binding, copper ion binding; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: mitochondrion, nucleolus, mitochondrial respiratory chain complex I, chloroplast envelope, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (ipr000194 : 135.85252) ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain & (reliability: 1270.0) & (original description: ATP synthase subunit beta OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=atpB PE=3 SV=1)'" P '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'tr|b7fte2|b7fte2_phatc' "'(gnl|cdd|84628 : 236.0) no description available & (gnl|cdd|36744 : 228.0) no description available & (ipr000131 : 172.72433) ATPase, F1 complex, gamma subunit & (p26360|atpg3_ipoba : 162.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (at2g33040 : 158.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (loc_os10g17280.1 : 154.0) no description available & (chl4|515720 : 146.0) no description available & (reliability: 316.0) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_18398 PE=3 SV=1)'" P '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'tr|b7g8w9|b7g8w9_phatc' "'(at1g51650 : 52.8) ATP synthase epsilon chain, mitochondrial; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: ATP biosynthetic process, ATP synthesis coupled proton transport; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, epsilon subunit, mitochondrial (InterPro:IPR006721); Has 247 Blast hits to 247 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 12; Plants - 69; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (q41898|atp5e_maize : 52.0) ATP synthase epsilon chain, mitochondrial (EC 3.6.3.14) - Zea mays (Maize) & (loc_os08g15170.1 : 52.0) no description available & (chl4|509630 : 45.8) no description available & (gnl|cdd|68208 : 44.6) no description available & (gnl|cdd|38705 : 41.1) no description available & (reliability: 105.6) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_39529 PE=4 SV=1)'" P '9.9' 'mitochondrial electron transport / ATP synthesis.F1-ATPase' 'tr|b7fum8|b7fum8_phatc' "'(gnl|cdd|36875 : 143.0) no description available & (gnl|cdd|84616 : 122.0) no description available & (p22778|atpo_ipoba : 111.0) ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) - Ipomoea batatas (Sweet potato) (Batate) & (loc_os06g43850.1 : 87.0) no description available & (at5g13450 : 83.2) delta subunit of Mt ATP synthase (ATP5); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, cobalt ion binding, zinc ion binding; INVOLVED IN: ATP synthesis coupled proton transport; LOCATED IN: mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, OSCP/delta subunit (InterPro:IPR000711); Has 5632 Blast hits to 5632 proteins in 1944 species: Archae - 0; Bacteria - 3697; Metazoa - 218; Fungi - 134; Plants - 154; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink). & (ipr000711 : 82.305275) ATPase, F1 complex, OSCP/delta subunit & (chl4|516661 : 51.6) no description available & (reliability: 166.4) & (original description: Predicted protein OS=Phaeodactylum tricornutum (strain CCAP 1055/1) GN=PHATRDRAFT_44603 PE=3 SV=1)'" P